AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene86684

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene86684.t1 MTR_7g027190 98.516 674 10 0 1 674 1 674 0.0 1384
MS.gene86684.t1 MTR_4g104020 41.604 399 211 6 288 674 133 521 1.76e-96 307
MS.gene86684.t1 MTR_3g065980 35.878 524 268 13 184 673 51 540 6.58e-93 298
MS.gene86684.t1 MTR_7g074650 41.910 377 186 6 304 673 442 792 2.69e-92 304
MS.gene86684.t1 MTR_8g442410 40.863 394 206 6 292 673 147 525 1.40e-88 286
MS.gene86684.t1 MTR_5g097480 40.204 393 205 5 293 673 170 544 4.61e-88 286
MS.gene86684.t1 MTR_4g102790 38.303 389 217 7 294 672 286 661 5.40e-82 273
MS.gene86684.t1 MTR_1g029420 39.589 389 201 6 299 673 224 592 8.63e-81 268
MS.gene86684.t1 MTR_2g082090 36.490 433 239 5 258 672 164 578 6.91e-79 262
MS.gene86684.t1 MTR_3g056110 32.914 556 295 10 162 673 21 542 1.95e-78 260
MS.gene86684.t1 MTR_5g094450 33.623 461 266 7 233 673 92 532 6.57e-78 258
MS.gene86684.t1 MTR_3g089055 37.629 388 210 5 299 673 197 565 1.11e-75 253
MS.gene86684.t1 MTR_3g089055 37.629 388 210 5 299 673 202 570 1.31e-75 253
MS.gene86684.t1 MTR_4g076020 39.037 374 192 11 304 673 88 429 1.85e-71 238
MS.gene86684.t1 MTR_4g133660 36.132 393 220 5 295 674 170 544 2.16e-71 241
MS.gene86684.t1 MTR_2g026250 33.915 401 218 8 295 674 223 597 3.81e-69 237
MS.gene86684.t1 MTR_4g064160 34.000 400 234 6 286 672 301 683 3.55e-65 228
MS.gene86684.t1 MTR_1g069725 35.128 390 224 10 290 674 99 464 5.92e-65 222
MS.gene86684.t1 MTR_5g058860 36.930 417 210 17 288 674 105 498 1.48e-64 222
MS.gene86684.t1 MTR_1g096030 34.140 413 220 14 290 673 70 459 8.68e-64 219
MS.gene86684.t1 MTR_3g072710 37.101 407 219 14 290 674 110 501 1.82e-63 219
MS.gene86684.t1 MTR_3g022830 30.140 428 227 5 301 673 26 436 1.12e-61 212
MS.gene86684.t1 MTR_7g062120 32.398 392 234 5 295 673 367 740 5.50e-59 212
MS.gene86684.t1 MTR_4g064120 31.910 398 234 5 291 670 245 623 1.30e-58 209
MS.gene86684.t1 MTR_4g064180 31.910 398 234 5 291 670 245 623 1.50e-57 206
MS.gene86684.t1 MTR_2g097310 31.105 389 239 6 295 672 267 637 8.26e-57 204
MS.gene86684.t1 MTR_2g097410 31.807 393 237 6 294 672 365 740 1.19e-56 205
MS.gene86684.t1 MTR_4g064200 31.714 391 234 7 295 672 279 649 2.03e-56 203
MS.gene86684.t1 MTR_4g064150 31.671 401 237 7 290 672 351 732 3.29e-55 201
MS.gene86684.t1 MTR_2g097390 30.591 389 241 6 295 672 270 640 6.18e-55 199
MS.gene86684.t1 MTR_2g097467 29.771 393 242 5 293 672 282 653 3.85e-54 197
MS.gene86684.t1 MTR_4g097080 30.412 388 241 9 299 673 132 503 3.58e-53 191
MS.gene86684.t1 MTR_2g097350 30.077 389 243 6 295 672 269 639 6.00e-53 193
MS.gene86684.t1 MTR_2g097473 30.227 397 235 8 293 672 282 653 3.62e-51 188
MS.gene86684.t1 MTR_4g077760 34.232 371 207 8 316 673 209 555 9.03e-51 185
MS.gene86684.t1 MTR_2g097463 28.205 390 248 5 295 672 285 654 4.80e-50 185
MS.gene86684.t1 MTR_2g034250 31.514 403 248 9 286 673 196 585 7.29e-49 181
MS.gene86684.t1 MTR_5g015490 31.343 402 237 12 293 673 107 490 5.90e-48 176
MS.gene86684.t1 MTR_2g097380 29.508 366 204 6 316 672 240 560 1.49e-47 176
MS.gene86684.t1 MTR_2g034280 29.703 404 251 11 286 673 189 575 2.10e-46 174
MS.gene86684.t1 MTR_2g034260 30.296 406 248 11 286 673 196 584 4.64e-46 173
MS.gene86684.t1 MTR_7g109580 29.723 397 253 9 286 673 175 554 3.69e-44 167
MS.gene86684.t1 MTR_2g089100 28.261 414 245 10 294 672 46 442 1.22e-43 163
MS.gene86684.t1 MTR_8g093070 32.426 404 221 15 287 672 126 495 6.96e-42 159
MS.gene86684.t1 MTR_1g086970 28.571 406 265 11 283 673 83 478 3.03e-41 157
MS.gene86684.t1 MTR_5g009080 36.797 231 124 2 289 516 45 256 7.69e-40 153
MS.gene86684.t1 MTR_5g009080 43.333 150 85 0 525 674 330 479 6.61e-39 150
MS.gene86684.t1 MTR_4g076140 44.595 148 82 0 526 673 322 469 2.22e-39 151
MS.gene86684.t1 MTR_4g076140 35.088 228 132 2 289 516 37 248 1.38e-34 137
MS.gene86684.t1 MTR_7g057230 34.007 297 175 8 392 672 365 656 2.22e-38 151
MS.gene86684.t1 MTR_0092s0100 29.124 388 238 11 297 674 372 732 2.63e-35 143
MS.gene86684.t1 MTR_0092s0100 29.124 388 238 11 297 674 369 729 2.90e-35 142
MS.gene86684.t1 MTR_6g047750 29.136 405 217 13 301 673 296 662 1.75e-33 137
MS.gene86684.t1 MTR_2g099110 26.329 395 253 10 300 673 74 451 7.59e-33 132
MS.gene86684.t1 MTR_4g095500 25.714 420 254 9 300 672 59 467 2.35e-32 131
MS.gene86684.t1 MTR_4g026485 28.238 386 235 12 301 674 270 625 1.20e-31 131
MS.gene86684.t1 MTR_5g015950 25.592 422 254 12 300 672 35 445 3.73e-31 127
MS.gene86684.t1 MTR_3g053270 25.592 422 254 12 300 672 35 445 3.73e-31 127
MS.gene86684.t1 MTR_8g077940 26.972 393 243 14 297 674 179 542 2.69e-28 120
MS.gene86684.t1 MTR_3g022580 41.441 111 64 1 563 673 74 183 2.40e-22 95.5
MS.gene86684.t1 MTR_8g020840 23.645 406 250 12 300 673 171 548 8.79e-20 94.0
MS.gene86684.t1 MTR_3g022005 41.176 102 59 1 572 673 25 125 9.79e-20 85.9
MS.gene86684.t1 MTR_1g106590 30.714 140 75 2 291 427 121 241 1.22e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene86684.t1 AT1G66350 44.103 390 184 11 291 674 146 507 1.04e-97 310
MS.gene86684.t1 AT3G03450 42.092 392 198 8 291 673 174 545 3.90e-95 304
MS.gene86684.t1 AT3G54220 41.709 398 196 6 285 672 278 649 1.06e-92 301
MS.gene86684.t1 AT1G14920 40.712 393 197 9 291 673 163 529 3.95e-90 291
MS.gene86684.t1 AT5G17490 42.967 391 190 10 291 673 151 516 2.98e-89 288
MS.gene86684.t1 AT2G01570 40.458 393 198 10 291 673 215 581 4.05e-87 285
MS.gene86684.t1 AT5G41920 40.759 395 202 9 287 673 30 400 1.11e-86 278
MS.gene86684.t1 AT2G04890 39.949 393 209 5 287 673 42 413 3.69e-84 271
MS.gene86684.t1 AT5G48150 39.481 385 204 5 301 673 123 490 4.32e-83 271
MS.gene86684.t1 AT5G48150 39.481 385 204 5 301 673 123 490 4.32e-83 271
MS.gene86684.t1 AT5G48150 39.481 385 204 5 301 673 123 490 4.32e-83 271
MS.gene86684.t1 AT5G48150 39.481 385 204 5 301 673 123 490 4.32e-83 271
MS.gene86684.t1 AT1G50600 38.560 389 209 6 297 673 156 526 1.52e-73 247
MS.gene86684.t1 AT1G50600 39.075 389 207 7 297 673 227 597 4.80e-73 247
MS.gene86684.t1 AT1G50600 38.560 389 209 6 297 673 231 601 5.76e-73 247
MS.gene86684.t1 AT1G21450 36.434 387 217 4 299 673 224 593 2.16e-72 245
MS.gene86684.t1 AT1G55580 37.438 406 226 8 296 673 40 445 9.44e-72 239
MS.gene86684.t1 AT4G17230 36.061 391 220 4 295 673 153 525 4.42e-68 232
MS.gene86684.t1 AT4G17230 36.061 391 220 4 295 673 153 525 4.42e-68 232
MS.gene86684.t1 AT1G63100 34.596 396 227 7 295 672 247 628 2.05e-67 233
MS.gene86684.t1 AT1G63100 34.596 396 227 7 295 672 272 653 5.02e-67 233
MS.gene86684.t1 AT1G07520 31.841 402 246 7 286 672 140 528 2.33e-59 209
MS.gene86684.t1 AT1G07520 31.841 402 246 7 286 672 140 528 2.33e-59 209
MS.gene86684.t1 AT1G07520 31.841 402 246 7 286 672 305 693 8.40e-59 211
MS.gene86684.t1 AT1G07520 31.841 402 246 7 286 672 304 692 8.96e-59 211
MS.gene86684.t1 AT3G46600 30.326 399 246 5 288 673 200 579 2.87e-57 204
MS.gene86684.t1 AT5G59450 29.442 394 246 6 295 673 222 598 3.54e-57 204
MS.gene86684.t1 AT3G46600 30.326 399 246 5 288 673 168 547 6.34e-57 202
MS.gene86684.t1 AT3G46600 30.670 388 237 5 299 673 3 371 1.94e-56 196
MS.gene86684.t1 AT1G07530 31.538 390 235 6 297 672 393 764 2.52e-55 202
MS.gene86684.t1 AT2G29065 29.820 389 244 7 300 672 252 627 9.40e-55 198
MS.gene86684.t1 AT5G66770 35.038 391 217 10 297 673 217 584 1.13e-53 194
MS.gene86684.t1 AT2G29060 30.612 392 238 7 297 672 281 654 7.21e-53 193
MS.gene86684.t1 AT2G29060 30.612 392 238 7 297 672 318 691 1.15e-52 193
MS.gene86684.t1 AT2G37650 30.827 399 229 7 295 673 330 701 2.15e-52 193
MS.gene86684.t1 AT2G37650 31.078 399 228 8 295 673 342 713 2.23e-52 193
MS.gene86684.t1 AT4G08250 32.432 407 228 14 288 672 95 476 2.60e-49 180
MS.gene86684.t1 AT3G50650 33.962 371 205 9 320 673 195 542 4.19e-46 172
MS.gene86684.t1 AT4G37650 29.397 398 243 10 300 673 146 529 2.00e-43 164
MS.gene86684.t1 AT5G52510 30.250 400 224 9 301 673 269 640 5.28e-40 156
MS.gene86684.t1 AT1G50420 45.333 150 82 0 525 674 331 480 6.63e-39 150
MS.gene86684.t1 AT1G50420 38.496 226 125 2 291 516 48 259 5.93e-38 147
MS.gene86684.t1 AT3G49950 28.678 401 237 10 299 672 29 407 3.92e-33 132
MS.gene86684.t1 AT4G00150 27.431 401 238 13 282 674 200 555 2.36e-28 120
MS.gene86684.t1 AT2G45160 27.829 327 204 9 367 674 327 640 2.37e-28 121
MS.gene86684.t1 AT3G60630 28.852 305 191 10 388 674 327 623 9.69e-28 119
MS.gene86684.t1 AT4G36710 26.972 393 252 11 292 673 117 485 1.53e-27 117
MS.gene86684.t1 AT3G13840 24.557 395 245 14 300 673 148 510 1.93e-14 77.0

Find 157 sgRNAs with CRISPR-Local

Find 199 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTCCAATATCAACAATTT+TGG 0.134391 7.4:+74372909 MS.gene86684:CDS
TGTTGCATATATTGATTATT+TGG 0.203768 7.4:-74372778 None:intergenic
GTAGAAGCTTGTGGTGAATT+AGG 0.209436 7.4:-74372598 None:intergenic
CTATCCAAAATTGTTGATAT+TGG 0.238972 7.4:-74372913 None:intergenic
GACTCAATCAAGGATATTAT+TGG 0.253341 7.4:+74374667 MS.gene86684:CDS
GGCAAGCTTGGTAGACAATT+TGG 0.255349 7.4:-74373941 None:intergenic
TGTATTCATGTGATGGTTAC+AGG 0.259318 7.4:+74374693 MS.gene86684:CDS
AATAGTAATAACCAACAAAA+AGG 0.261319 7.4:+74372718 MS.gene86684:CDS
TGCCTCAAACGCCTCGAAAA+TGG 0.275785 7.4:-74374000 None:intergenic
GCCAGCTATTGAAGAGTTCT+TGG 0.285111 7.4:+74372819 MS.gene86684:CDS
TTAGGGTTAATGTTTCTAAT+TGG 0.288688 7.4:-74372580 None:intergenic
GATGGTAAGTTTAGGCTTTG+TGG 0.292426 7.4:-74372451 None:intergenic
TAGAAGCTTGTGGTGAATTA+GGG 0.297220 7.4:-74372597 None:intergenic
GACATGAGAGGTTGGAGAAA+TGG 0.307042 7.4:+74374588 MS.gene86684:CDS
CTTGATTGAGTCACTGCATT+AGG 0.311878 7.4:-74374656 None:intergenic
GTATCATCAAATGGGATCTA+TGG 0.314373 7.4:+74373041 MS.gene86684:CDS
TCATGAAATCATTATCTAAA+TGG 0.317694 7.4:-74372549 None:intergenic
AACCGTCTCCACCGTGTTCC+TGG 0.336032 7.4:+74374305 MS.gene86684:CDS
TTGATGATGACTTGGTTGTT+AGG 0.342078 7.4:-74373824 None:intergenic
GGTCTCTTATCATGGATAAC+AGG 0.350431 7.4:-74374343 None:intergenic
ACTCAATCAAGGATATTATT+GGG 0.352700 7.4:+74374668 MS.gene86684:CDS
ATTTGTTTGATTTGAAGAAT+TGG 0.357982 7.4:-74372365 None:intergenic
TCCTCAAGTTGTTCTCCAAC+AGG 0.371000 7.4:-74374224 None:intergenic
CCGCCGTGTAGGCGAGGCTT+TGG 0.375077 7.4:+74374268 MS.gene86684:CDS
TGGTGCTTGGTCTCTTATCA+TGG 0.378979 7.4:-74374351 None:intergenic
ATAAAGGTTGTTTGTTGCTT+GGG 0.381702 7.4:+74374726 MS.gene86684:CDS
GTCACTGCATTAGGACTTAG+AGG 0.385725 7.4:-74374647 None:intergenic
CTAACAGTTCCTATTCCAAT+TGG 0.386725 7.4:+74373144 MS.gene86684:CDS
GATAAAGGTTGTTTGTTGCT+TGG 0.388205 7.4:+74374725 MS.gene86684:CDS
CCATGCAGAAGCAGCGATAA+TGG 0.390323 7.4:-74374762 None:intergenic
GCTTCCCACATTGAACTATC+TGG 0.392042 7.4:-74372514 None:intergenic
TTTGTTTGATTTGAAGAATT+GGG 0.395359 7.4:-74372364 None:intergenic
CCGGCGGTGCTCCGTTCCTT+AGG 0.397678 7.4:+74374105 MS.gene86684:CDS
AGGACTTCCATAGGGTTTGA+TGG 0.398057 7.4:-74373909 None:intergenic
AATGCAAAGCCTCGAGAAAT+CGG 0.401833 7.4:-74374430 None:intergenic
GCCAATGCCTGCATGAATGC+AGG 0.402364 7.4:-74374074 None:intergenic
ATGCAAATTCAAAGCCTATC+AGG 0.406320 7.4:+74372655 MS.gene86684:CDS
CAGGCCATTGGTAGCCTTGA+AGG 0.407502 7.4:-74374055 None:intergenic
TACAGGTTAACTGAGGATAA+AGG 0.412392 7.4:+74374710 MS.gene86684:CDS
CAGGCATTGGCTGCACGGCC+CGG 0.413918 7.4:+74374086 MS.gene86684:CDS
CACAAGCTTTACAACAAGAA+AGG 0.417444 7.4:+74373079 MS.gene86684:CDS
ATTTGAGAGATGGTAAGTTT+AGG 0.417615 7.4:-74372459 None:intergenic
TGATGATGACTTGGTTGTTA+GGG 0.418899 7.4:-74373823 None:intergenic
ATCGACCTTGATATCCTTCA+AGG 0.423493 7.4:+74374041 MS.gene86684:CDS
GAGTGATATGTATCATCAAA+TGG 0.430639 7.4:+74373032 MS.gene86684:CDS
TCCACAAGTGTCACTATGTT+TGG 0.431028 7.4:-74374371 None:intergenic
ATATATTTGCACCGGAGATT+CGG 0.433485 7.4:+74374528 MS.gene86684:CDS
CCTAAGGAACGGAGCACCGC+CGG 0.433800 7.4:-74374105 None:intergenic
TCCTTAGGATCACTGGAGTT+GGG 0.435193 7.4:+74374120 MS.gene86684:CDS
CTCGAAAATGGCTTGGTTAG+CGG 0.435294 7.4:-74373988 None:intergenic
ATCGAATCGGTTAGGGAAAC+CGG 0.437086 7.4:+74374149 MS.gene86684:CDS
TCATGCAGGCATTGGCTGCA+CGG 0.438295 7.4:+74374081 MS.gene86684:CDS
GGCCGTGCATCGAATCGGTT+AGG 0.440216 7.4:+74374141 MS.gene86684:CDS
GGAGAAATGGAGGAAGATAA+TGG 0.442415 7.4:+74374601 MS.gene86684:CDS
TAAATCACCACAAGAATTTG+TGG 0.443098 7.4:-74372407 None:intergenic
AAAATGATGAATTCACTTTG+TGG 0.443783 7.4:+74372307 None:intergenic
ATTACCTGCTCAATTCCAAT+TGG 0.449064 7.4:-74373159 None:intergenic
TTCCTTAGGATCACTGGAGT+TGG 0.451123 7.4:+74374119 MS.gene86684:CDS
GTGTTCCTGGCAATCATCTC+GGG 0.453444 7.4:+74374318 MS.gene86684:CDS
GATAGAGAGACATGAGAGGT+TGG 0.454325 7.4:+74374580 MS.gene86684:CDS
CAAAATTCTTCAAGCTATTG+TGG 0.454394 7.4:+74372946 MS.gene86684:CDS
TGCTCAATTCCAATTGGAAT+AGG 0.456239 7.4:-74373153 None:intergenic
TACTGCTCTACCTTAGCCCT+TGG 0.456368 7.4:-74374506 None:intergenic
AGCAAGAAGCAAGCCATAAC+GGG 0.462121 7.4:+74374393 MS.gene86684:CDS
GCCACGATGTTCCGAATCTC+CGG 0.464344 7.4:-74374539 None:intergenic
CCGTGTAGGCGAGGCTTTGG+CGG 0.466492 7.4:+74374271 MS.gene86684:CDS
CGTGTTCCTGGCAATCATCT+CGG 0.467483 7.4:+74374317 MS.gene86684:CDS
CGAGGCTTTGCATTACTACT+CGG 0.469216 7.4:+74374439 MS.gene86684:CDS
ACATTGAACTATCTGGTGAT+TGG 0.469373 7.4:-74372507 None:intergenic
ATGAGAGGTTGGAGAAATGG+AGG 0.478165 7.4:+74374591 MS.gene86684:CDS
TCCAAGAACTCTTCAATAGC+TGG 0.478205 7.4:-74372820 None:intergenic
AACACGGTGGAGACGGTTAA+CGG 0.479130 7.4:-74374300 None:intergenic
GCTCCGTTCCTTAGGATCAC+TGG 0.483442 7.4:+74374113 MS.gene86684:CDS
TATTCCAATTGGAATTGAGC+AGG 0.485481 7.4:+74373155 MS.gene86684:CDS
GTGTTACTACTTTATTGAGC+TGG 0.486255 7.4:-74373731 None:intergenic
TTCCATAGGGTTTGATGGGA+AGG 0.488537 7.4:-74373904 None:intergenic
GCCTGCATTCATGCAGGCAT+TGG 0.492416 7.4:+74374073 MS.gene86684:CDS
TCCCTAACCGATTCGATGCA+CGG 0.492832 7.4:-74374143 None:intergenic
CCCTTCGAGTTCCACCCTGT+TGG 0.500773 7.4:+74374209 MS.gene86684:CDS
GTGTCACTATGTTTGGTGCT+TGG 0.501545 7.4:-74374364 None:intergenic
CCGCCAAAGCCTCGCCTACA+CGG 0.501971 7.4:-74374271 None:intergenic
TAACTCTGTTAAGCATCGTC+CGG 0.502256 7.4:-74374168 None:intergenic
AGTGATATGTATCATCAAAT+GGG 0.505152 7.4:+74373033 MS.gene86684:CDS
TACCTTCCCATCAAACCCTA+TGG 0.506323 7.4:+74373902 MS.gene86684:CDS
TCCTGTGGAGTCAGCACCAA+GGG 0.507337 7.4:+74374490 MS.gene86684:CDS
GGAAGATAATGGAAGGGAAA+GGG 0.523029 7.4:+74374612 MS.gene86684:CDS
AGTTGGGCCGTGCATCGAAT+CGG 0.524300 7.4:+74374136 MS.gene86684:CDS
GCCCTTGGTGCTGACTCCAC+AGG 0.524463 7.4:-74374491 None:intergenic
GCATTGGCTGCACGGCCCGG+CGG 0.530002 7.4:+74374089 MS.gene86684:CDS
CCAATGGCCTGCATTCATGC+AGG 0.532300 7.4:+74374067 MS.gene86684:CDS
TAGATCTTGAGGACTTCCAT+AGG 0.534706 7.4:-74373918 None:intergenic
TGCCAGGAACACGGTGGAGA+CGG 0.538538 7.4:-74374307 None:intergenic
AGAATCTCTAAGTGCAAGAC+TGG 0.538771 7.4:+74373794 MS.gene86684:CDS
GGTAGATAAACATGATGAAG+AGG 0.540118 7.4:-74373883 None:intergenic
GGACTTCCATAGGGTTTGAT+GGG 0.540263 7.4:-74373908 None:intergenic
CTAATGCAGTGACTCAATCA+AGG 0.544135 7.4:+74374657 MS.gene86684:CDS
TTGGGTTTGTATTCATGTGA+TGG 0.544918 7.4:+74374686 MS.gene86684:CDS
CGGAACATCGTGGCATGTGA+AGG 0.545048 7.4:+74374548 MS.gene86684:CDS
CTACTTTATTGAGCTGGTGT+AGG 0.548195 7.4:-74373725 None:intergenic
AGACAATTTGGTAGATCTTG+AGG 0.549770 7.4:-74373929 None:intergenic
AAGGTTGTTTGTTGCTTGGG+TGG 0.550029 7.4:+74374729 MS.gene86684:CDS
TCTAAGTCAAATTTGAGAGA+TGG 0.550529 7.4:-74372469 None:intergenic
AGATCTTGAGGACTTCCATA+GGG 0.551151 7.4:-74373917 None:intergenic
CTAAGGAACGGAGCACCGCC+GGG 0.552205 7.4:-74374104 None:intergenic
CAAACGCCTCGAAAATGGCT+TGG 0.554574 7.4:-74373995 None:intergenic
GAGCAAGAAGCAAGCCATAA+CGG 0.555779 7.4:+74374392 MS.gene86684:CDS
GGAGTCAGCACCAAGGGCTA+AGG 0.557086 7.4:+74374496 MS.gene86684:CDS
GCCCAACTCCAGTGATCCTA+AGG 0.558573 7.4:-74374121 None:intergenic
TGTAACTATAACTATGCTCA+AGG 0.559054 7.4:+74372631 MS.gene86684:CDS
GGTAGCCTTGAAGGATATCA+AGG 0.560859 7.4:-74374046 None:intergenic
ATGGAAGGGAAAGGGTTCAA+AGG 0.562746 7.4:+74374620 MS.gene86684:CDS
GGATATCAAGGTCGATGACA+TGG 0.564199 7.4:-74374034 None:intergenic
AGGTTCCCGAGATGATTGCC+AGG 0.564807 7.4:-74374323 None:intergenic
GCCGTGCATCGAATCGGTTA+GGG 0.568254 7.4:+74374142 MS.gene86684:CDS
CCAACAGGGTGGAACTCGAA+GGG 0.569813 7.4:-74374209 None:intergenic
AAATGGAGGAAGATAATGGA+AGG 0.574690 7.4:+74374605 MS.gene86684:CDS
GAGGTGGTGAACAACCTGAT+AGG 0.574741 7.4:-74372669 None:intergenic
CCATTATCGCTGCTTCTGCA+TGG 0.581952 7.4:+74374762 MS.gene86684:CDS
ACATGAAGCTACTCTTTGCA+TGG 0.581987 7.4:-74373766 None:intergenic
CCTGCATGAATGCAGGCCAT+TGG 0.587372 7.4:-74374067 None:intergenic
GTTTAACCGCCGTGTAGGCG+AGG 0.587763 7.4:+74374262 MS.gene86684:CDS
GTGAATACATGCTAGCAAGA+AGG 0.591113 7.4:+74373700 MS.gene86684:CDS
TCCAACAGGGTGGAACTCGA+AGG 0.593188 7.4:-74374210 None:intergenic
TGTGCTGAAGCAGTGGCAAA+AGG 0.593207 7.4:+74373678 MS.gene86684:CDS
GAATTAAATACTCTATGAAG+TGG 0.597232 7.4:-74372754 None:intergenic
CCCTGTTGGAGAACAACTTG+AGG 0.601784 7.4:+74374223 MS.gene86684:CDS
TCTAGCATGTGCTGAAGCAG+TGG 0.602572 7.4:+74373671 MS.gene86684:CDS
CGAGATGATTGCCAGGAACA+CGG 0.603757 7.4:-74374316 None:intergenic
ATCACCAGATAGTTCAATGT+GGG 0.605621 7.4:+74372510 MS.gene86684:CDS
ATATCCTTCAAGGCTACCAA+TGG 0.609017 7.4:+74374051 MS.gene86684:CDS
AGAGGATAGAGAGACATGAG+AGG 0.611332 7.4:+74374576 MS.gene86684:CDS
AGGAAGATAATGGAAGGGAA+AGG 0.613642 7.4:+74374611 MS.gene86684:CDS
CATCGTGGCATGTGAAGGTG+AGG 0.614548 7.4:+74374553 MS.gene86684:CDS
CTTTGCATGGAGTCACCTAG+TGG 0.624018 7.4:-74373753 None:intergenic
AGAGCAGTATATATTTGCAC+CGG 0.624565 7.4:+74374520 MS.gene86684:CDS
TTCCTGTGGAGTCAGCACCA+AGG 0.627178 7.4:+74374489 MS.gene86684:CDS
AATGGAGGAAGATAATGGAA+GGG 0.644464 7.4:+74374606 MS.gene86684:CDS
CCTCAAGTTGTTCTCCAACA+GGG 0.648235 7.4:-74374223 None:intergenic
ATTTGACTTAGATGTTGATG+TGG 0.651519 7.4:+74372480 MS.gene86684:CDS
AATAAAGTAGTAACACCACT+AGG 0.659108 7.4:+74373738 MS.gene86684:CDS
CACATGTTTAACCGCCGTGT+AGG 0.660169 7.4:+74374257 MS.gene86684:CDS
GATGACGATGATAACGATGA+TGG 0.665670 7.4:-74373861 None:intergenic
ACTCCAGTGATCCTAAGGAA+CGG 0.672214 7.4:-74374116 None:intergenic
CAACAGGGTGGAACTCGAAG+GGG 0.673995 7.4:-74374208 None:intergenic
ACACGGCGGTTAAACATGTG+CGG 0.674730 7.4:-74374254 None:intergenic
TGGCATGTGAAGGTGAGGAG+AGG 0.683443 7.4:+74374558 MS.gene86684:CDS
ACCAAACATAGTGACACTTG+TGG 0.687522 7.4:+74374370 MS.gene86684:CDS
TATATGTAGGAACAAGACAG+TGG 0.702151 7.4:+74373627 MS.gene86684:intron
TTATTGTAAGTAGAAGCTTG+TGG 0.706364 7.4:-74372607 None:intergenic
CCAATTTGTGATGCAAAACG+AGG 0.711917 7.4:-74372688 None:intergenic
AATCACCAGATAGTTCAATG+TGG 0.716750 7.4:+74372509 MS.gene86684:CDS
TGATGGTTACAGGTTAACTG+AGG 0.719493 7.4:+74374703 MS.gene86684:CDS
CAAGTTGTTCTCCAACAGGG+TGG 0.720607 7.4:-74374220 None:intergenic
ATTTGTGATGCAAAACGAGG+TGG 0.735195 7.4:-74372685 None:intergenic
ACCGGAGATTCGGAACATCG+TGG 0.740006 7.4:+74374538 MS.gene86684:CDS
GATGATTGCCAGGAACACGG+TGG 0.742020 7.4:-74374313 None:intergenic
CCAAAGCCTCGCCTACACGG+CGG 0.759718 7.4:-74374268 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAATATTTAATACAGAAA+TGG - chr7.4:74373506-74373525 None:intergenic 10.0%
!!! TTTGAATTAATTAAGATTTT+AGG - chr7.4:74373210-74373229 None:intergenic 10.0%
!! TATGTTAATTTATTCAGTTA+GGG - chr7.4:74373254-74373273 None:intergenic 15.0%
!! TTATGTTAATTTATTCAGTT+AGG - chr7.4:74373255-74373274 None:intergenic 15.0%
!! AATAGTAATAACCAACAAAA+AGG + chr7.4:74372718-74372737 MS.gene86684:CDS 20.0%
!! ATAGTAATAACCAACAAAAA+GGG + chr7.4:74372719-74372738 MS.gene86684:CDS 20.0%
!! ATATTTAATACAGAAATGGA+AGG - chr7.4:74373502-74373521 None:intergenic 20.0%
!! GCTATATATCTAATATATGT+AGG + chr7.4:74373614-74373633 MS.gene86684:intron 20.0%
!! TCATGAAATCATTATCTAAA+TGG - chr7.4:74372552-74372571 None:intergenic 20.0%
!!! ATTTGTTTGATTTGAAGAAT+TGG - chr7.4:74372368-74372387 None:intergenic 20.0%
!!! TGTTGCATATATTGATTATT+TGG - chr7.4:74372781-74372800 None:intergenic 20.0%
!!! TTTGTTTGATTTGAAGAATT+GGG - chr7.4:74372367-74372386 None:intergenic 20.0%
! ACTCAATCAAGGATATTATT+GGG + chr7.4:74374668-74374687 MS.gene86684:CDS 25.0%
! AGTGATATGTATCATCAAAT+GGG + chr7.4:74373033-74373052 MS.gene86684:CDS 25.0%
! ATTGGTTATGTAATCCATAA+AGG + chr7.4:74373448-74373467 MS.gene86684:intron 25.0%
! CTATCCAAAATTGTTGATAT+TGG - chr7.4:74372916-74372935 None:intergenic 25.0%
! GAATTAAATACTCTATGAAG+TGG - chr7.4:74372757-74372776 None:intergenic 25.0%
! TTAATTTATTCAGTTAGGGA+GGG - chr7.4:74373250-74373269 None:intergenic 25.0%
!! AACTCCAATATCAACAATTT+TGG + chr7.4:74372909-74372928 MS.gene86684:CDS 25.0%
!! AAGTGTGCAAATTTTATGTA+AGG - chr7.4:74373966-74373985 None:intergenic 25.0%
!! AGTGTGCAAATTTTATGTAA+GGG - chr7.4:74373965-74373984 None:intergenic 25.0%
!! TTAGGGTTAATGTTTCTAAT+TGG - chr7.4:74372583-74372602 None:intergenic 25.0%
!!! TTTTAGGTGAAAAAAGACAA+AGG - chr7.4:74373194-74373213 None:intergenic 25.0%
AAAAATGCCACAAATTCTTG+TGG + chr7.4:74372400-74372419 MS.gene86684:CDS 30.0%
AATAAAGTAGTAACACCACT+AGG + chr7.4:74373738-74373757 MS.gene86684:CDS 30.0%
AATAACCAACAAAAAGGGAA+AGG + chr7.4:74372724-74372743 MS.gene86684:CDS 30.0%
ATTTGAGAGATGGTAAGTTT+AGG - chr7.4:74372462-74372481 None:intergenic 30.0%
CAAAATTCTTCAAGCTATTG+TGG + chr7.4:74372946-74372965 MS.gene86684:CDS 30.0%
GACTCAATCAAGGATATTAT+TGG + chr7.4:74374667-74374686 MS.gene86684:CDS 30.0%
GAGTGATATGTATCATCAAA+TGG + chr7.4:74373032-74373051 MS.gene86684:CDS 30.0%
GTTAATTTATTCAGTTAGGG+AGG - chr7.4:74373251-74373270 None:intergenic 30.0%
TAAATCACCACAAGAATTTG+TGG - chr7.4:74372410-74372429 None:intergenic 30.0%
TAATTTATTCAGTTAGGGAG+GGG - chr7.4:74373249-74373268 None:intergenic 30.0%
TCTAAGTCAAATTTGAGAGA+TGG - chr7.4:74372472-74372491 None:intergenic 30.0%
TGTAACTATAACTATGCTCA+AGG + chr7.4:74372631-74372650 MS.gene86684:CDS 30.0%
TGTAATCCATAAAGGAATAG+TGG + chr7.4:74373456-74373475 MS.gene86684:intron 30.0%
TTATTGTAAGTAGAAGCTTG+TGG - chr7.4:74372610-74372629 None:intergenic 30.0%
! ATAAAGGTTGTTTGTTGCTT+GGG + chr7.4:74374726-74374745 MS.gene86684:CDS 30.0%
! ATTTGACTTAGATGTTGATG+TGG + chr7.4:74372480-74372499 MS.gene86684:CDS 30.0%
! GAAGAATCTACTATTTTGCA+TGG + chr7.4:74372979-74372998 MS.gene86684:CDS 30.0%
!! TGATCACTTTTCATCAACAA+AGG + chr7.4:74372861-74372880 MS.gene86684:CDS 30.0%
!!! TTCTTCTGAATGTTTTGACA+TGG + chr7.4:74372885-74372904 MS.gene86684:CDS 30.0%
AATCACCAGATAGTTCAATG+TGG + chr7.4:74372509-74372528 MS.gene86684:CDS 35.0%
ACATTGAACTATCTGGTGAT+TGG - chr7.4:74372510-74372529 None:intergenic 35.0%
AGACAATTTGGTAGATCTTG+AGG - chr7.4:74373932-74373951 None:intergenic 35.0%
AGAGCAGTATATATTTGCAC+CGG + chr7.4:74374520-74374539 MS.gene86684:CDS 35.0%
ATATATTTGCACCGGAGATT+CGG + chr7.4:74374528-74374547 MS.gene86684:CDS 35.0%
ATCACCAGATAGTTCAATGT+GGG + chr7.4:74372510-74372529 MS.gene86684:CDS 35.0%
ATGCAAATTCAAAGCCTATC+AGG + chr7.4:74372655-74372674 MS.gene86684:CDS 35.0%
ATTACCTGCTCAATTCCAAT+TGG - chr7.4:74373162-74373181 None:intergenic 35.0%
CACAAGATCATGCATAACAA+TGG + chr7.4:74373389-74373408 MS.gene86684:intron 35.0%
CACAAGCTTTACAACAAGAA+AGG + chr7.4:74373079-74373098 MS.gene86684:CDS 35.0%
CTAACAGTTCCTATTCCAAT+TGG + chr7.4:74373144-74373163 MS.gene86684:CDS 35.0%
GGTAGATAAACATGATGAAG+AGG - chr7.4:74373886-74373905 None:intergenic 35.0%
GGTCGTTAGATTTACGATAT+TGG + chr7.4:74373430-74373449 MS.gene86684:intron 35.0%
GTATCATCAAATGGGATCTA+TGG + chr7.4:74373041-74373060 MS.gene86684:CDS 35.0%
TACAGGTTAACTGAGGATAA+AGG + chr7.4:74374710-74374729 MS.gene86684:CDS 35.0%
TAGAAGCTTGTGGTGAATTA+GGG - chr7.4:74372600-74372619 None:intergenic 35.0%
TATATGTAGGAACAAGACAG+TGG + chr7.4:74373627-74373646 MS.gene86684:intron 35.0%
TATTCCAATTGGAATTGAGC+AGG + chr7.4:74373155-74373174 MS.gene86684:CDS 35.0%
TGCTCAATTCCAATTGGAAT+AGG - chr7.4:74373156-74373175 None:intergenic 35.0%
TGTATTCATGTGATGGTTAC+AGG + chr7.4:74374693-74374712 MS.gene86684:CDS 35.0%
TTGGGTTTGTATTCATGTGA+TGG + chr7.4:74374686-74374705 MS.gene86684:CDS 35.0%
! ATTTTATGTAAGGGCAAGCT+TGG - chr7.4:74373956-74373975 None:intergenic 35.0%
! GAATCTACTATTTTGCATGG+TGG + chr7.4:74372982-74373001 MS.gene86684:CDS 35.0%
! GAGTTCTTGGAAGATTTTCA+AGG + chr7.4:74372832-74372851 MS.gene86684:CDS 35.0%
! GATAAAGGTTGTTTGTTGCT+TGG + chr7.4:74374725-74374744 MS.gene86684:CDS 35.0%
! GCATCTTTTGATGTTTCTCT+TGG - chr7.4:74373107-74373126 None:intergenic 35.0%
! GTCTAAAGTCATGATTGATG+CGG + chr7.4:74373325-74373344 MS.gene86684:intron 35.0%
! GTGTTACTACTTTATTGAGC+TGG - chr7.4:74373734-74373753 None:intergenic 35.0%
! TAAGTCCTTTCCCTTTTTGT+TGG - chr7.4:74372732-74372751 None:intergenic 35.0%
!! AAATGGAGGAAGATAATGGA+AGG + chr7.4:74374605-74374624 MS.gene86684:CDS 35.0%
!! AATGGAGGAAGATAATGGAA+GGG + chr7.4:74374606-74374625 MS.gene86684:CDS 35.0%
!! CGATGATGGTGTTAACTTTT+TGG - chr7.4:74373850-74373869 None:intergenic 35.0%
!! TGATGATGACTTGGTTGTTA+GGG - chr7.4:74373826-74373845 None:intergenic 35.0%
!! TTGATGATGACTTGGTTGTT+AGG - chr7.4:74373827-74373846 None:intergenic 35.0%
!!! CTTTTTGGTTGATGATGACT+TGG - chr7.4:74373835-74373854 None:intergenic 35.0%
AATGCAAAGCCTCGAGAAAT+CGG - chr7.4:74374433-74374452 None:intergenic 40.0%
ACATGAAGCTACTCTTTGCA+TGG - chr7.4:74373769-74373788 None:intergenic 40.0%
ACCAAACATAGTGACACTTG+TGG + chr7.4:74374370-74374389 MS.gene86684:CDS 40.0%
AGAAATCGGCCCAAAAAGTA+CGG - chr7.4:74374419-74374438 None:intergenic 40.0%
AGAATCTCTAAGTGCAAGAC+TGG + chr7.4:74373794-74373813 MS.gene86684:CDS 40.0%
AGATCTTGAGGACTTCCATA+GGG - chr7.4:74373920-74373939 None:intergenic 40.0%
ATATCCTTCAAGGCTACCAA+TGG + chr7.4:74374051-74374070 MS.gene86684:CDS 40.0%
ATCGACCTTGATATCCTTCA+AGG + chr7.4:74374041-74374060 MS.gene86684:CDS 40.0%
ATTTGTGATGCAAAACGAGG+TGG - chr7.4:74372688-74372707 None:intergenic 40.0%
CCAATTTGTGATGCAAAACG+AGG - chr7.4:74372691-74372710 None:intergenic 40.0%
CTAATGCAGTGACTCAATCA+AGG + chr7.4:74374657-74374676 MS.gene86684:CDS 40.0%
CTACTTTATTGAGCTGGTGT+AGG - chr7.4:74373728-74373747 None:intergenic 40.0%
CTTGATTGAGTCACTGCATT+AGG - chr7.4:74374659-74374678 None:intergenic 40.0%
GATGGTAAGTTTAGGCTTTG+TGG - chr7.4:74372454-74372473 None:intergenic 40.0%
GGAGAAATGGAGGAAGATAA+TGG + chr7.4:74374601-74374620 MS.gene86684:CDS 40.0%
GGTCTCTTATCATGGATAAC+AGG - chr7.4:74374346-74374365 None:intergenic 40.0%
GTAGAAGCTTGTGGTGAATT+AGG - chr7.4:74372601-74372620 None:intergenic 40.0%
GTGAATACATGCTAGCAAGA+AGG + chr7.4:74373700-74373719 MS.gene86684:CDS 40.0%
TAGATCTTGAGGACTTCCAT+AGG - chr7.4:74373921-74373940 None:intergenic 40.0%
TCCAAGAACTCTTCAATAGC+TGG - chr7.4:74372823-74372842 None:intergenic 40.0%
TCTAACGACCATAGACATTG+AGG - chr7.4:74373420-74373439 None:intergenic 40.0%
TGATGGTTACAGGTTAACTG+AGG + chr7.4:74374703-74374722 MS.gene86684:CDS 40.0%
! CCTCGTTTTGCATCACAAAT+TGG + chr7.4:74372688-74372707 MS.gene86684:CDS 40.0%
! GATGACGATGATAACGATGA+TGG - chr7.4:74373864-74373883 None:intergenic 40.0%
! TAACTCTGTTAAGCATCGTC+CGG - chr7.4:74374171-74374190 None:intergenic 40.0%
! TCCACAAGTGTCACTATGTT+TGG - chr7.4:74374374-74374393 None:intergenic 40.0%
!! AGGAAGATAATGGAAGGGAA+AGG + chr7.4:74374611-74374630 MS.gene86684:CDS 40.0%
!! GGAAGATAATGGAAGGGAAA+GGG + chr7.4:74374612-74374631 MS.gene86684:CDS 40.0%
ACTCCAGTGATCCTAAGGAA+CGG - chr7.4:74374119-74374138 None:intergenic 45.0%
AGAGGATAGAGAGACATGAG+AGG + chr7.4:74374576-74374595 MS.gene86684:CDS 45.0%
AGCAAGAAGCAAGCCATAAC+GGG + chr7.4:74374393-74374412 MS.gene86684:CDS 45.0%
AGGACTTCCATAGGGTTTGA+TGG - chr7.4:74373912-74373931 None:intergenic 45.0%
ATCGAATCGGTTAGGGAAAC+CGG + chr7.4:74374149-74374168 MS.gene86684:CDS 45.0%
ATGAGAGGTTGGAGAAATGG+AGG + chr7.4:74374591-74374610 MS.gene86684:CDS 45.0%
ATGGAAGGGAAAGGGTTCAA+AGG + chr7.4:74374620-74374639 MS.gene86684:CDS 45.0%
CGAGGCTTTGCATTACTACT+CGG + chr7.4:74374439-74374458 MS.gene86684:CDS 45.0%
GACATGAGAGGTTGGAGAAA+TGG + chr7.4:74374588-74374607 MS.gene86684:CDS 45.0%
GAGCAAGAAGCAAGCCATAA+CGG + chr7.4:74374392-74374411 MS.gene86684:CDS 45.0%
GATAGAGAGACATGAGAGGT+TGG + chr7.4:74374580-74374599 MS.gene86684:CDS 45.0%
GCCAGCTATTGAAGAGTTCT+TGG + chr7.4:74372819-74372838 MS.gene86684:CDS 45.0%
GCTTCCCACATTGAACTATC+TGG - chr7.4:74372517-74372536 None:intergenic 45.0%
GGACTTCCATAGGGTTTGAT+GGG - chr7.4:74373911-74373930 None:intergenic 45.0%
GGATATCAAGGTCGATGACA+TGG - chr7.4:74374037-74374056 None:intergenic 45.0%
GGCAAGCTTGGTAGACAATT+TGG - chr7.4:74373944-74373963 None:intergenic 45.0%
GTCACTGCATTAGGACTTAG+AGG - chr7.4:74374650-74374669 None:intergenic 45.0%
TACCTTCCCATCAAACCCTA+TGG + chr7.4:74373902-74373921 MS.gene86684:CDS 45.0%
TCCTTAGGATCACTGGAGTT+GGG + chr7.4:74374120-74374139 MS.gene86684:CDS 45.0%
TGGTGCTTGGTCTCTTATCA+TGG - chr7.4:74374354-74374373 None:intergenic 45.0%
TGGTGTGTCCTCAATGTCTA+TGG + chr7.4:74373409-74373428 MS.gene86684:intron 45.0%
TTCCATAGGGTTTGATGGGA+AGG - chr7.4:74373907-74373926 None:intergenic 45.0%
TTCCTTAGGATCACTGGAGT+TGG + chr7.4:74374119-74374138 MS.gene86684:CDS 45.0%
! AAGGTTGTTTGTTGCTTGGG+TGG + chr7.4:74374729-74374748 MS.gene86684:CDS 45.0%
! CCTCAAGTTGTTCTCCAACA+GGG - chr7.4:74374226-74374245 None:intergenic 45.0%
! CTCGGCAATTTTCGACTCTT+TGG + chr7.4:74374457-74374476 MS.gene86684:CDS 45.0%
! GGTAGCCTTGAAGGATATCA+AGG - chr7.4:74374049-74374068 None:intergenic 45.0%
! TCCTCAAGTTGTTCTCCAAC+AGG - chr7.4:74374227-74374246 None:intergenic 45.0%
!! CTCGAAAATGGCTTGGTTAG+CGG - chr7.4:74373991-74374010 None:intergenic 45.0%
!! GTGTCACTATGTTTGGTGCT+TGG - chr7.4:74374367-74374386 None:intergenic 45.0%
!!! CATAACGGGCCGTACTTTTT+GGG + chr7.4:74374407-74374426 MS.gene86684:CDS 45.0%
!!! TTTGGACGCTACTTTTCCTG+TGG + chr7.4:74374475-74374494 MS.gene86684:CDS 45.0%
AACACGGTGGAGACGGTTAA+CGG - chr7.4:74374303-74374322 None:intergenic 50.0%
ACACGGCGGTTAAACATGTG+CGG - chr7.4:74374257-74374276 None:intergenic 50.0%
CAAACGCCTCGAAAATGGCT+TGG - chr7.4:74373998-74374017 None:intergenic 50.0%
CAAGTTGTTCTCCAACAGGG+TGG - chr7.4:74374223-74374242 None:intergenic 50.0%
CACATGTTTAACCGCCGTGT+AGG + chr7.4:74374257-74374276 MS.gene86684:CDS 50.0%
CCATGCAGAAGCAGCGATAA+TGG - chr7.4:74374765-74374784 None:intergenic 50.0%
CCATTATCGCTGCTTCTGCA+TGG + chr7.4:74374762-74374781 MS.gene86684:CDS 50.0%
CCCTGTTGGAGAACAACTTG+AGG + chr7.4:74374223-74374242 MS.gene86684:CDS 50.0%
CGAGATGATTGCCAGGAACA+CGG - chr7.4:74374319-74374338 None:intergenic 50.0%
CGTGTTCCTGGCAATCATCT+CGG + chr7.4:74374317-74374336 MS.gene86684:CDS 50.0%
CTTTGCATGGAGTCACCTAG+TGG - chr7.4:74373756-74373775 None:intergenic 50.0%
GAGGTGGTGAACAACCTGAT+AGG - chr7.4:74372672-74372691 None:intergenic 50.0%
GCTGCGCCACTATTCCTTTA+TGG - chr7.4:74373465-74373484 None:intergenic 50.0%
GTGTTCCTGGCAATCATCTC+GGG + chr7.4:74374318-74374337 MS.gene86684:CDS 50.0%
TACTGCTCTACCTTAGCCCT+TGG - chr7.4:74374509-74374528 None:intergenic 50.0%
TCTAGCATGTGCTGAAGCAG+TGG + chr7.4:74373671-74373690 MS.gene86684:CDS 50.0%
TGCCTCAAACGCCTCGAAAA+TGG - chr7.4:74374003-74374022 None:intergenic 50.0%
TGTGCTGAAGCAGTGGCAAA+AGG + chr7.4:74373678-74373697 MS.gene86684:CDS 50.0%
! CCAAAAAGTACGGCCCGTTA+TGG - chr7.4:74374409-74374428 None:intergenic 50.0%
!! AGCCATTTTCGAGGCGTTTG+AGG + chr7.4:74373998-74374017 MS.gene86684:CDS 50.0%
!! CGCTAACCAAGCCATTTTCG+AGG + chr7.4:74373989-74374008 MS.gene86684:CDS 50.0%
!! CTTTTTGGGCCGATTTCTCG+AGG + chr7.4:74374421-74374440 MS.gene86684:CDS 50.0%
!! TCCCTAACCGATTCGATGCA+CGG - chr7.4:74374146-74374165 None:intergenic 50.0%
!!! CCATAACGGGCCGTACTTTT+TGG + chr7.4:74374406-74374425 MS.gene86684:CDS 50.0%
ACCGGAGATTCGGAACATCG+TGG + chr7.4:74374538-74374557 MS.gene86684:CDS 55.0%
AGGTTCCCGAGATGATTGCC+AGG - chr7.4:74374326-74374345 None:intergenic 55.0%
AGTTGGGCCGTGCATCGAAT+CGG + chr7.4:74374136-74374155 MS.gene86684:CDS 55.0%
CAACAGGGTGGAACTCGAAG+GGG - chr7.4:74374211-74374230 None:intergenic 55.0%
CATCGTGGCATGTGAAGGTG+AGG + chr7.4:74374553-74374572 MS.gene86684:CDS 55.0%
CCAACAGGGTGGAACTCGAA+GGG - chr7.4:74374212-74374231 None:intergenic 55.0%
CCAATGGCCTGCATTCATGC+AGG + chr7.4:74374067-74374086 MS.gene86684:CDS 55.0%
CCTGCATGAATGCAGGCCAT+TGG - chr7.4:74374070-74374089 None:intergenic 55.0%
CGGAACATCGTGGCATGTGA+AGG + chr7.4:74374548-74374567 MS.gene86684:CDS 55.0%
GATGATTGCCAGGAACACGG+TGG - chr7.4:74374316-74374335 None:intergenic 55.0%
GCCAATGCCTGCATGAATGC+AGG - chr7.4:74374077-74374096 None:intergenic 55.0%
GCCACGATGTTCCGAATCTC+CGG - chr7.4:74374542-74374561 None:intergenic 55.0%
GCCCAACTCCAGTGATCCTA+AGG - chr7.4:74374124-74374143 None:intergenic 55.0%
GCCGTGCATCGAATCGGTTA+GGG + chr7.4:74374142-74374161 MS.gene86684:CDS 55.0%
GCCTGCATTCATGCAGGCAT+TGG + chr7.4:74374073-74374092 MS.gene86684:CDS 55.0%
GCTCCGTTCCTTAGGATCAC+TGG + chr7.4:74374113-74374132 MS.gene86684:CDS 55.0%
TCCAACAGGGTGGAACTCGA+AGG - chr7.4:74374213-74374232 None:intergenic 55.0%
TCCTGTGGAGTCAGCACCAA+GGG + chr7.4:74374490-74374509 MS.gene86684:CDS 55.0%
TGGCATGTGAAGGTGAGGAG+AGG + chr7.4:74374558-74374577 MS.gene86684:CDS 55.0%
TTCCTGTGGAGTCAGCACCA+AGG + chr7.4:74374489-74374508 MS.gene86684:CDS 55.0%
! CAGGCCATTGGTAGCCTTGA+AGG - chr7.4:74374058-74374077 None:intergenic 55.0%
!! TCATGCAGGCATTGGCTGCA+CGG + chr7.4:74374081-74374100 MS.gene86684:CDS 55.0%
AACCGTCTCCACCGTGTTCC+TGG + chr7.4:74374305-74374324 MS.gene86684:CDS 60.0%
GGAGTCAGCACCAAGGGCTA+AGG + chr7.4:74374496-74374515 MS.gene86684:CDS 60.0%
GGCCGTGCATCGAATCGGTT+AGG + chr7.4:74374141-74374160 MS.gene86684:CDS 60.0%
GTTTAACCGCCGTGTAGGCG+AGG + chr7.4:74374262-74374281 MS.gene86684:CDS 60.0%
TGCCAGGAACACGGTGGAGA+CGG - chr7.4:74374310-74374329 None:intergenic 60.0%
! CCCTTCGAGTTCCACCCTGT+TGG + chr7.4:74374209-74374228 MS.gene86684:CDS 60.0%
CCAAAGCCTCGCCTACACGG+CGG - chr7.4:74374271-74374290 None:intergenic 65.0%
CCGCCAAAGCCTCGCCTACA+CGG - chr7.4:74374274-74374293 None:intergenic 65.0%
! CCGTGTAGGCGAGGCTTTGG+CGG + chr7.4:74374271-74374290 MS.gene86684:CDS 65.0%
!! CCTAAGGAACGGAGCACCGC+CGG - chr7.4:74374108-74374127 None:intergenic 65.0%
!! CTAAGGAACGGAGCACCGCC+GGG - chr7.4:74374107-74374126 None:intergenic 65.0%
!! GCCCTTGGTGCTGACTCCAC+AGG - chr7.4:74374494-74374513 None:intergenic 65.0%
CCGCCGTGTAGGCGAGGCTT+TGG + chr7.4:74374268-74374287 MS.gene86684:CDS 70.0%
CCGGCGGTGCTCCGTTCCTT+AGG + chr7.4:74374105-74374124 MS.gene86684:CDS 70.0%
!! CAGGCATTGGCTGCACGGCC+CGG + chr7.4:74374086-74374105 MS.gene86684:CDS 70.0%
!! GCATTGGCTGCACGGCCCGG+CGG + chr7.4:74374089-74374108 MS.gene86684:CDS 75.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 74372310 74374793 74372310 ID=MS.gene86684
chr7.4 mRNA 74372310 74374793 74372310 ID=MS.gene86684.t1;Parent=MS.gene86684
chr7.4 exon 74372310 74373176 74372310 ID=MS.gene86684.t1.exon1;Parent=MS.gene86684.t1
chr7.4 CDS 74372310 74373176 74372310 ID=cds.MS.gene86684.t1;Parent=MS.gene86684.t1
chr7.4 exon 74373636 74374793 74373636 ID=MS.gene86684.t1.exon2;Parent=MS.gene86684.t1
chr7.4 CDS 74373636 74374793 74373636 ID=cds.MS.gene86684.t1;Parent=MS.gene86684.t1
Gene Sequence

>MS.gene86684

ATGATGAATTCACTTTGTGGAAGCTCAAATTCTCTCAAAGAAAAATGTCTTCAACCCAATTCTTCAAATCAAACAAATACACACTCAAAGAAAAATGCCACAAATTCTTGTGGTGATTTAGAGCAAATTAATGTTCTAACTCCACAAAGCCTAAACTTACCATCTCTCAAATTTGACTTAGATGTTGATGTGGAAGTCCAATCACCAGATAGTTCAATGTGGGAAGCATTTTTCAATGACCATTTAGATAATGATTTCATGATATCATCACCAATTAGAAACATTAACCCTAATTCACCACAAGCTTCTACTTACAATAATTGTAACTATAACTATGCTCAAGGCATGCAAATTCAAAGCCTATCAGGTTGTTCACCACCTCGTTTTGCATCACAAATTGGTTCATTAAATAGTAATAACCAACAAAAAGGGAAAGGACTTAGTCCACTTCATAGAGTATTTAATTCACCAAATAATCAATATATGCAACATGTTGAGAATCTTTCATTGCCAGCTATTGAAGAGTTCTTGGAAGATTTTCAAGGTGATGTTGATCACTTTTCATCAACAAAGGTTTCTTCTGAATGTTTTGACATGGAAACTCCAATATCAACAATTTTGGATAGTTTAACAATGCAAAATTCTTCAAGCTATTGTGGTTCAGTTAATGAAGAATCTACTATTTTGCATGGTGGTAATTCTTCTTCTCAACTTTCTCAAGAGAGTGATATGTATCATCAAATGGGATCTATGGCTAGTGCTTCTCTTTCACAAGCTTTACAACAAGAAAGGTACCAAGAGAAACATCAAAAGATGCAAGCTCAACAACAGAGTCTAACAGTTCCTATTCCAATTGGAATTGAGCAGGTAATAAAATCTTTCCTTTGTCTTTTTTCACCTAAAATCTTAATTAATTCAAAGTTCAAGTTTTTTTATCCCCTCCCTAACTGAATAAATTAACATAATCAATAAACAAACTACTATTTATTATCAATTTTTCTAATTCAACTTGACTGTCTAAAGTCATGATTGATGCGGCAATGAAAACTATATTATAAGACGTACATCAAAAAAGAGTTCACAAGATCATGCATAACAATGGTGTGTCCTCAATGTCTATGGTCGTTAGATTTACGATATTGGTTATGTAATCCATAAAGGAATAGTGGCGCAGCTTATTGCTCGCTTGCCTTCCATTTCTGTATTAAATATTTAATACTTGATGTACATCTGAATGATCATGATCTAGACAAATATATTTGAAGCAATTTACAAGATTTCTTTTTATGATTTCTGAATTAAAAGCTATATATCTAATATATGTAGGAACAAGACAGTGGACTTCAACTAGTGCACTTACTTCTAGCATGTGCTGAAGCAGTGGCAAAAGGTGAATACATGCTAGCAAGAAGGTACCTACACCAGCTCAATAAAGTAGTAACACCACTAGGTGACTCCATGCAAAGAGTAGCTTCATGTTTCACAGAATCTCTAAGTGCAAGACTGGCTGCAACCCTAACAACCAAGTCATCATCAACCAAAAAGTTAACACCATCATCGTTATCATCGTCATCCTCTTCATCATGTTTATCTACCTTCCCATCAAACCCTATGGAAGTCCTCAAGATCTACCAAATTGTCTACCAAGCTTGCCCTTACATAAAATTTGCACACTTTACCGCTAACCAAGCCATTTTCGAGGCGTTTGAGGCAGAAGAACGTGTCCATGTCATCGACCTTGATATCCTTCAAGGCTACCAATGGCCTGCATTCATGCAGGCATTGGCTGCACGGCCCGGCGGTGCTCCGTTCCTTAGGATCACTGGAGTTGGGCCGTGCATCGAATCGGTTAGGGAAACCGGACGATGCTTAACAGAGTTAGCTCATTCTCTTCGTATCCCCTTCGAGTTCCACCCTGTTGGAGAACAACTTGAGGATCTAAAACCGCACATGTTTAACCGCCGTGTAGGCGAGGCTTTGGCGGTTAACACCGTTAACCGTCTCCACCGTGTTCCTGGCAATCATCTCGGGAACCTGTTATCCATGATAAGAGACCAAGCACCAAACATAGTGACACTTGTGGAGCAAGAAGCAAGCCATAACGGGCCGTACTTTTTGGGCCGATTTCTCGAGGCTTTGCATTACTACTCGGCAATTTTCGACTCTTTGGACGCTACTTTTCCTGTGGAGTCAGCACCAAGGGCTAAGGTAGAGCAGTATATATTTGCACCGGAGATTCGGAACATCGTGGCATGTGAAGGTGAGGAGAGGATAGAGAGACATGAGAGGTTGGAGAAATGGAGGAAGATAATGGAAGGGAAAGGGTTCAAAGGAGTGCCTCTAAGTCCTAATGCAGTGACTCAATCAAGGATATTATTGGGTTTGTATTCATGTGATGGTTACAGGTTAACTGAGGATAAAGGTTGTTTGTTGCTTGGGTGGCAAGACAGAGCCATTATCGCTGCTTCTGCATGGCGATGCTGA
Protein sequence

>MS.gene86684.t1

MMNSLCGSSNSLKEKCLQPNSSNQTNTHSKKNATNSCGDLEQINVLTPQSLNLPSLKFDLDVDVEVQSPDSSMWEAFFNDHLDNDFMISSPIRNINPNSPQASTYNNCNYNYAQGMQIQSLSGCSPPRFASQIGSLNSNNQQKGKGLSPLHRVFNSPNNQYMQHVENLSLPAIEEFLEDFQGDVDHFSSTKVSSECFDMETPISTILDSLTMQNSSSYCGSVNEESTILHGGNSSSQLSQESDMYHQMGSMASASLSQALQQERYQEKHQKMQAQQQSLTVPIPIGIEQEQDSGLQLVHLLLACAEAVAKGEYMLARRYLHQLNKVVTPLGDSMQRVASCFTESLSARLAATLTTKSSSTKKLTPSSLSSSSSSSCLSTFPSNPMEVLKIYQIVYQACPYIKFAHFTANQAIFEAFEAEERVHVIDLDILQGYQWPAFMQALAARPGGAPFLRITGVGPCIESVRETGRCLTELAHSLRIPFEFHPVGEQLEDLKPHMFNRRVGEALAVNTVNRLHRVPGNHLGNLLSMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPVESAPRAKVEQYIFAPEIRNIVACEGEERIERHERLEKWRKIMEGKGFKGVPLSPNAVTQSRILLGLYSCDGYRLTEDKGCLLLGWQDRAIIAASAWRC