AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene86918

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene86918.t1 MTR_1g106460 95.455 330 15 0 1 330 1 330 0.0 646
MS.gene86918.t1 MTR_1g106460 94.565 276 15 0 1 276 1 276 0.0 531
MS.gene86918.t1 MTR_5g005110 49.699 332 131 10 9 329 9 315 1.91e-86 263
MS.gene86918.t1 MTR_1g106470 42.593 324 144 7 1 324 1 282 3.85e-60 194
MS.gene86918.t1 MTR_5g005110 42.500 280 125 9 9 277 9 263 5.19e-50 168
MS.gene86918.t1 MTR_3g103030 52.147 163 77 1 161 323 153 314 5.97e-48 164
MS.gene86918.t1 MTR_1g018090 51.235 162 69 2 152 313 198 349 1.48e-40 145
MS.gene86918.t1 MTR_1g106480 54.745 137 29 2 217 323 18 151 4.12e-38 133
MS.gene86918.t1 MTR_1g106470 35.793 271 132 7 9 279 9 237 8.49e-28 108
MS.gene86918.t1 MTR_5g079500 62.857 70 26 0 237 306 217 286 9.34e-24 99.8
MS.gene86918.t1 MTR_8g093500 53.623 69 32 0 234 302 110 178 4.95e-18 83.2
MS.gene86918.t1 MTR_4g131160 43.333 90 49 1 214 301 170 259 7.69e-17 80.9
MS.gene86918.t1 MTR_4g131160 43.333 90 49 1 214 301 173 262 7.89e-17 80.9
MS.gene86918.t1 MTR_3g101810 49.254 67 34 0 234 300 167 233 1.29e-16 79.0
MS.gene86918.t1 MTR_7g069590 58.182 55 23 0 245 299 33 87 3.33e-16 75.1
MS.gene86918.t1 MTR_1g018090 40.310 129 67 2 152 280 198 316 4.11e-16 78.2
MS.gene86918.t1 MTR_1g080890 47.059 68 36 0 234 301 189 256 5.60e-14 72.4
MS.gene86918.t1 MTR_1g019240 43.548 62 35 0 254 315 101 162 1.66e-12 67.0
MS.gene86918.t1 MTR_5g017040 42.105 76 44 0 254 329 121 196 3.50e-12 67.0
MS.gene86918.t1 MTR_1g084980 50.000 48 24 0 254 301 478 525 1.26e-11 65.9
MS.gene86918.t1 MTR_3g449770 36.264 91 46 3 224 307 288 373 2.93e-11 64.7
MS.gene86918.t1 MTR_1g069155 37.349 83 45 1 226 301 298 380 7.31e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene86918.t1 AT2G14760 37.216 352 150 12 10 324 6 323 3.70e-56 186
MS.gene86918.t1 AT2G14760 35.890 365 150 13 10 324 6 336 2.07e-52 176
MS.gene86918.t1 AT4G33880 38.136 354 165 16 10 320 6 348 2.85e-45 158
MS.gene86918.t1 AT5G43175 54.140 157 57 2 184 325 63 219 4.75e-45 153
MS.gene86918.t1 AT1G27740 53.642 151 52 3 176 325 121 254 1.10e-44 154
MS.gene86918.t1 AT1G66470 54.839 93 41 1 214 306 172 263 1.57e-24 101
MS.gene86918.t1 AT5G37800 61.039 77 27 1 230 306 196 269 1.57e-24 101
MS.gene86918.t1 AT4G30980 45.783 83 45 0 219 301 111 193 1.84e-17 82.0
MS.gene86918.t1 AT4G30980 45.783 83 45 0 219 301 159 241 2.05e-17 82.4
MS.gene86918.t1 AT2G24260 53.846 65 30 0 237 301 34 98 5.15e-17 79.7
MS.gene86918.t1 AT2G24260 53.846 65 30 0 237 301 137 201 1.10e-16 80.1
MS.gene86918.t1 AT5G01305 48.649 74 33 1 237 305 36 109 2.73e-16 75.9
MS.gene86918.t1 AT3G21330 39.394 99 59 1 202 300 234 331 3.69e-16 79.0
MS.gene86918.t1 AT5G58010 47.143 70 37 0 232 301 93 162 9.43e-16 77.0
MS.gene86918.t1 AT4G00120 51.852 54 26 0 247 300 121 174 3.53e-15 73.6
MS.gene86918.t1 AT4G36930 39.189 74 45 0 245 318 198 271 5.16e-12 66.6
MS.gene86918.t1 AT2G20180 40.244 82 38 2 254 326 223 302 5.52e-12 66.6
MS.gene86918.t1 AT2G20180 40.244 82 38 2 254 326 223 302 5.52e-12 66.6
MS.gene86918.t1 AT2G20180 40.244 82 38 2 254 326 223 302 5.52e-12 66.6
MS.gene86918.t1 AT1G09530 39.394 66 40 0 254 319 353 418 9.60e-12 66.2
MS.gene86918.t1 AT1G09530 39.394 66 40 0 254 319 353 418 9.60e-12 66.2
MS.gene86918.t1 AT1G09530 39.394 66 40 0 254 319 353 418 9.60e-12 66.2
MS.gene86918.t1 AT1G09530 39.394 66 40 0 254 319 353 418 9.60e-12 66.2
MS.gene86918.t1 AT1G09530 39.394 66 40 0 254 319 353 418 9.60e-12 66.2
MS.gene86918.t1 AT1G09530 39.394 66 40 0 254 319 353 418 9.60e-12 66.2
MS.gene86918.t1 AT2G20180 40.244 82 38 2 254 326 294 373 1.13e-11 65.9
MS.gene86918.t1 AT2G20180 40.244 82 38 2 254 326 294 373 1.13e-11 65.9
MS.gene86918.t1 AT2G20180 40.244 82 38 2 254 326 294 373 1.13e-11 65.9
MS.gene86918.t1 AT2G20180 40.244 82 38 2 254 326 294 373 1.13e-11 65.9
MS.gene86918.t1 AT5G67110 42.857 77 28 3 254 330 103 163 9.24e-11 61.2

Find 52 sgRNAs with CRISPR-Local

Find 99 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAACAGATTTGAAGTTAA+AGG 0.203807 1.2:-79218565 MS.gene86918:CDS
TCAAATCTGTTGAATCATTC+TGG 0.235168 1.2:+79218574 None:intergenic
CATTAGGGACTAGGCTTTGC+AGG 0.277798 1.2:+79218317 None:intergenic
CTTGGAAGTTATTAAGTAAC+TGG 0.304266 1.2:+79219442 None:intergenic
AACACTATAAGTGCTAAAAT+TGG 0.312512 1.2:+79219173 None:intergenic
TTCATTCCATTGTAAGCAAT+TGG 0.326950 1.2:+79217957 None:intergenic
CAAGTTTCTGAGCACCATTA+TGG 0.327811 1.2:-79219423 MS.gene86918:CDS
TCAACAGATTTGAAGTTAAA+GGG 0.332099 1.2:-79218564 MS.gene86918:CDS
AGAGTTTGGTAAAGATGTTT+TGG 0.332649 1.2:-79219109 MS.gene86918:CDS
CTAAATTGAAATTTCCATAA+TGG 0.336286 1.2:+79219409 None:intergenic
CCTTGGTTCCATTAGGGACT+AGG 0.345834 1.2:+79218308 None:intergenic
CATAATGGTGCTCAGAAACT+TGG 0.346093 1.2:+79219424 None:intergenic
GAAAACACTTCTGAAGAGTT+TGG 0.361815 1.2:-79219123 MS.gene86918:CDS
TTTAGCACTTATAGTGTTCA+AGG 0.374420 1.2:-79219168 MS.gene86918:CDS
AAAGCTACCTTGGTTCCATT+AGG 0.376583 1.2:+79218301 None:intergenic
GGATGAAAGTCATGATCTTC+AGG 0.377305 1.2:-79218673 MS.gene86918:CDS
ACAAGAGAAATGTGAAATCT+AGG 0.391427 1.2:-79218734 MS.gene86918:CDS
AAGCTACCTTGGTTCCATTA+GGG 0.399329 1.2:+79218302 None:intergenic
GCTATATATCTATGGTAGTT+CGG 0.420297 1.2:+79217905 None:intergenic
CTGCAAAGCCTAGTCCCTAA+TGG 0.420311 1.2:-79218316 MS.gene86918:CDS
TATATTGCTAGTATCAGAAA+TGG 0.424213 1.2:+79219263 None:intergenic
GAAGAATGGAGTTCTCTTAG+TGG 0.449677 1.2:-79219498 MS.gene86918:CDS
ACTATTGTGGATTCATGTCC+TGG 0.460970 1.2:+79219366 None:intergenic
TATATCTATGGTAGTTCGGT+TGG 0.463306 1.2:+79217909 None:intergenic
TAGAAATTCCATCTACATCA+TGG 0.473913 1.2:-79219389 MS.gene86918:CDS
AATATATTTCATAATACAAA+TGG 0.474972 1.2:-79219246 MS.gene86918:CDS
TGTCCTGGCCATGATGTAGA+TGG 0.481256 1.2:+79219381 None:intergenic
GCTATTCATGCTCACTATTG+TGG 0.481463 1.2:+79219353 None:intergenic
AAGGGAAAATCAAAATGTAA+TGG 0.488727 1.2:-79218546 MS.gene86918:CDS
ATATCTATGGTAGTTCGGTT+GGG 0.502830 1.2:+79217910 None:intergenic
AAGATCTAGGAGCTCGATGA+AGG 0.519130 1.2:-79219040 MS.gene86918:intron
TTCTGAGCTCTGATGATCAC+TGG 0.521996 1.2:-79217989 MS.gene86918:CDS
GCTTACAATGGAATGAACAT+TGG 0.525606 1.2:-79217951 MS.gene86918:CDS
ATGAGCAAAGTTGTGAAGAA+TGG 0.531367 1.2:-79219512 MS.gene86918:CDS
GGCAATCATGTAGCCAATGT+TGG 0.533102 1.2:+79219194 None:intergenic
GTTCGGTTGGGATAATGTTG+AGG 0.541601 1.2:+79217922 None:intergenic
AATGATCATGTAGCCAACAT+TGG 0.547548 1.2:-79219207 MS.gene86918:CDS
ATTCCATCTACATCATGGCC+AGG 0.561187 1.2:-79219384 MS.gene86918:CDS
GTTCAAAAGCAACGCTGACG+AGG 0.565933 1.2:-79218694 MS.gene86918:CDS
GTTCTTGATACACTCTTTCG+CGG 0.570482 1.2:+79219083 None:intergenic
GCTTTAAAGAAGCTAAATGC+AGG 0.589797 1.2:-79218615 MS.gene86918:CDS
GGATATCAGCACCATGCTTG+AGG 0.592275 1.2:-79218198 MS.gene86918:CDS
TATGCTCCAATTGCTTACAA+TGG 0.606083 1.2:-79217963 MS.gene86918:CDS
GGAAAATCAAAATGTAATGG+AGG 0.608687 1.2:-79218543 MS.gene86918:CDS
ATATTTCATAATACAAATGG+TGG 0.608776 1.2:-79219243 MS.gene86918:CDS
TTGCACAGCTTCCTCAAGCA+TGG 0.610000 1.2:+79218187 None:intergenic
ATAGACACCTTGTGGATCAG+AGG 0.616647 1.2:+79218515 None:intergenic
ATCTAGGAAGAAACCAAAGT+CGG 0.617908 1.2:-79218718 MS.gene86918:CDS
GGAGCAGAATTTGAGCTCAG+AGG 0.625492 1.2:-79218652 MS.gene86918:CDS
CCTAGTCCCTAATGGAACCA+AGG 0.646129 1.2:-79218308 MS.gene86918:intron
GGTTCTGCCTCTGATCCACA+AGG 0.648330 1.2:-79218522 MS.gene86918:CDS
AGAGTGTATCAAGAACAACC+TGG 0.703200 1.2:-79219076 MS.gene86918:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATATTTCATAATACAAA+TGG - chr1.2:79218190-79218209 MS.gene86918:CDS 10.0%
!! TATTTCAAGAATATATAATA+TGG + chr1.2:79219380-79219399 None:intergenic 10.0%
!!! TTCAACTATTTTTAAATAAT+TGG - chr1.2:79219169-79219188 MS.gene86918:CDS 10.0%
!! TAAATTTATGATTCATATCA+AGG + chr1.2:79219338-79219357 None:intergenic 15.0%
!! AACAAATAGAAACATGTATT+TGG + chr1.2:79218513-79218532 None:intergenic 20.0%
!! ATATTTCATAATACAAATGG+TGG - chr1.2:79218193-79218212 MS.gene86918:CDS 20.0%
!! CAAATTAAGGTAAAAACATA+AGG - chr1.2:79219293-79219312 MS.gene86918:CDS 20.0%
!! CTAAATTGAAATTTCCATAA+TGG + chr1.2:79218030-79218049 None:intergenic 20.0%
!!! CTGTGATTTTGAATTATTAA+AGG - chr1.2:79219024-79219043 MS.gene86918:intron 20.0%
!!! CTTATGTTTTTACCTTAATT+TGG + chr1.2:79219295-79219314 None:intergenic 20.0%
!!! TATTTGTTTACATTTAAGAC+CGG - chr1.2:79218525-79218544 MS.gene86918:CDS 20.0%
!!! TCAATATGTTTAATTTTGTC+TGG - chr1.2:79218627-79218646 MS.gene86918:CDS 20.0%
!!! TTATTAGCAATGGTATTTTT+AGG + chr1.2:79218974-79218993 None:intergenic 20.0%
!!! TTTTCTTACTCATGAAATAT+AGG - chr1.2:79219214-79219233 MS.gene86918:CDS 20.0%
!!! TTTTGATTTAATGATTCCAT+AGG - chr1.2:79218670-79218689 MS.gene86918:CDS 20.0%
! AAAAATCAGGAAAAAGATCT+AGG - chr1.2:79218383-79218402 MS.gene86918:intron 25.0%
! AACACTATAAGTGCTAAAAT+TGG + chr1.2:79218266-79218285 None:intergenic 25.0%
! AAGGGAAAATCAAAATGTAA+TGG - chr1.2:79218890-79218909 MS.gene86918:intron 25.0%
! AATTCAAAATCACAGTACTT+TGG + chr1.2:79219019-79219038 None:intergenic 25.0%
! GGACATAAAATTATTAGCAA+TGG + chr1.2:79218984-79219003 None:intergenic 25.0%
! GGTATTATGTATAAGCAAAA+AGG - chr1.2:79218463-79218482 MS.gene86918:intron 25.0%
! TATATTGCTAGTATCAGAAA+TGG + chr1.2:79218176-79218195 None:intergenic 25.0%
!! TCAACAGATTTGAAGTTAAA+GGG - chr1.2:79218872-79218891 MS.gene86918:intron 25.0%
!! TTACTATTATCAGCATTTTG+AGG + chr1.2:79218121-79218140 None:intergenic 25.0%
!! TTCAACAGATTTGAAGTTAA+AGG - chr1.2:79218871-79218890 MS.gene86918:intron 25.0%
!!! GTATTTTTAGGAAATGCAAT+TGG + chr1.2:79218962-79218981 None:intergenic 25.0%
ACAAGAGAAATGTGAAATCT+AGG - chr1.2:79218702-79218721 MS.gene86918:CDS 30.0%
CTTGGAAGTTATTAAGTAAC+TGG + chr1.2:79217997-79218016 None:intergenic 30.0%
GGAAAATCAAAATGTAATGG+AGG - chr1.2:79218893-79218912 MS.gene86918:intron 30.0%
GTACTTTGGACAAAAATTCA+AGG + chr1.2:79219005-79219024 None:intergenic 30.0%
TAGAAATTCCATCTACATCA+TGG - chr1.2:79218047-79218066 MS.gene86918:intron 30.0%
TCAAATCTGTTGAATCATTC+TGG + chr1.2:79218865-79218884 None:intergenic 30.0%
TCTTACTCATGAAATATAGG+TGG - chr1.2:79219217-79219236 MS.gene86918:CDS 30.0%
TGCTTATACATAATACCAGA+GGG + chr1.2:79218460-79218479 None:intergenic 30.0%
TTCATTCCATTGTAAGCAAT+TGG + chr1.2:79219482-79219501 None:intergenic 30.0%
TTGCTTATACATAATACCAG+AGG + chr1.2:79218461-79218480 None:intergenic 30.0%
TTTAGCACTTATAGTGTTCA+AGG - chr1.2:79218268-79218287 MS.gene86918:intron 30.0%
! AAGTGTTTTCAGTTATCTGT+TGG + chr1.2:79218303-79218322 None:intergenic 30.0%
! AGAGTTTGGTAAAGATGTTT+TGG - chr1.2:79218327-79218346 MS.gene86918:CDS 30.0%
! ATCTTTTTCCTGATTTTTCC+AGG + chr1.2:79218381-79218400 None:intergenic 30.0%
! GCAATATGTGAAGTTTTTAC+AGG - chr1.2:79219268-79219287 MS.gene86918:CDS 30.0%
! GTTTTTACAGGTCCAAATTA+AGG - chr1.2:79219280-79219299 MS.gene86918:CDS 30.0%
AAGAACAACCTGGAAAAATC+AGG - chr1.2:79218370-79218389 MS.gene86918:intron 35.0%
AATGATCATGTAGCCAACAT+TGG - chr1.2:79218229-79218248 MS.gene86918:intron 35.0%
ATCTAGGAAGAAACCAAAGT+CGG - chr1.2:79218718-79218737 MS.gene86918:CDS 35.0%
ATGAGCAAAGTTGTGAAGAA+TGG - chr1.2:79217924-79217943 MS.gene86918:CDS 35.0%
ATGATTCATATCAAGGCCTA+AGG + chr1.2:79219331-79219350 None:intergenic 35.0%
CCAGGACTATAAAAAAAAGC+AGG + chr1.2:79218567-79218586 None:intergenic 35.0%
GCTTACAATGGAATGAACAT+TGG - chr1.2:79219485-79219504 MS.gene86918:CDS 35.0%
GGACTATAAAAAAAAGCAGG+AGG + chr1.2:79218564-79218583 None:intergenic 35.0%
TATGCTCCAATTGCTTACAA+TGG - chr1.2:79219473-79219492 MS.gene86918:CDS 35.0%
TCTTTGTAAATTACTCCCTC+TGG - chr1.2:79218442-79218461 MS.gene86918:intron 35.0%
! CTCTTGTTCTTTTGTACCTA+TGG + chr1.2:79218689-79218708 None:intergenic 35.0%
! GAAAACACTTCTGAAGAGTT+TGG - chr1.2:79218313-79218332 MS.gene86918:CDS 35.0%
! TGTTTACATTTAAGACCGGA+GGG - chr1.2:79218529-79218548 MS.gene86918:CDS 35.0%
! TTGTTTACATTTAAGACCGG+AGG - chr1.2:79218528-79218547 MS.gene86918:CDS 35.0%
!! GCTTTAAAGAAGCTAAATGC+AGG - chr1.2:79218821-79218840 MS.gene86918:intron 35.0%
!!! CCTGCTTTTTTTTATAGTCC+TGG - chr1.2:79218564-79218583 MS.gene86918:CDS 35.0%
AAAGCTACCTTGGTTCCATT+AGG + chr1.2:79219138-79219157 None:intergenic 40.0%
AAGCTACCTTGGTTCCATTA+GGG + chr1.2:79219137-79219156 None:intergenic 40.0%
ACTATTGTGGATTCATGTCC+TGG + chr1.2:79218073-79218092 None:intergenic 40.0%
AGAGTGTATCAAGAACAACC+TGG - chr1.2:79218360-79218379 MS.gene86918:intron 40.0%
ATTCATATCAAGGCCTAAGG+AGG + chr1.2:79219328-79219347 None:intergenic 40.0%
CAAGTTTCTGAGCACCATTA+TGG - chr1.2:79218013-79218032 MS.gene86918:intron 40.0%
CATAATGGTGCTCAGAAACT+TGG + chr1.2:79218015-79218034 None:intergenic 40.0%
GAAGAATGGAGTTCTCTTAG+TGG - chr1.2:79217938-79217957 MS.gene86918:CDS 40.0%
GCTATTCATGCTCACTATTG+TGG + chr1.2:79218086-79218105 None:intergenic 40.0%
GGATGAAAGTCATGATCTTC+AGG - chr1.2:79218763-79218782 MS.gene86918:intron 40.0%
GTGATATTGTGACAGGCATT+TGG - chr1.2:79218586-79218605 MS.gene86918:CDS 40.0%
GTTCTTGATACACTCTTTCG+CGG + chr1.2:79218356-79218375 None:intergenic 40.0%
TGTCATTGAGAAAGCTACCT+TGG + chr1.2:79219148-79219167 None:intergenic 40.0%
! ACTTTTGCATAGACACCTTG+TGG + chr1.2:79218932-79218951 None:intergenic 40.0%
!! AGCTGAGGAAGCTGATTTTA+TGG - chr1.2:79217970-79217989 MS.gene86918:CDS 40.0%
!! GCTGAGGAAGCTGATTTTAT+GGG - chr1.2:79217971-79217990 MS.gene86918:CDS 40.0%
!! TTGCTTTTGAACTCCGACTT+TGG + chr1.2:79218734-79218753 None:intergenic 40.0%
!!! TAGTGGATTTTACACAGCTG+AGG - chr1.2:79217955-79217974 MS.gene86918:CDS 40.0%
AAGATCTAGGAGCTCGATGA+AGG - chr1.2:79218396-79218415 MS.gene86918:intron 45.0%
AAGGATCCTCATTCCTCCTT+AGG - chr1.2:79219312-79219331 MS.gene86918:CDS 45.0%
AGTCCTGGTGATATTGTGAC+AGG - chr1.2:79218579-79218598 MS.gene86918:CDS 45.0%
ATAGACACCTTGTGGATCAG+AGG + chr1.2:79218924-79218943 None:intergenic 45.0%
ATGCCTGTCACAATATCACC+AGG + chr1.2:79218585-79218604 None:intergenic 45.0%
ATTCCATCTACATCATGGCC+AGG - chr1.2:79218052-79218071 MS.gene86918:intron 45.0%
GGCAATCATGTAGCCAATGT+TGG + chr1.2:79218245-79218264 None:intergenic 45.0%
GTTCGGTTGGGATAATGTTG+AGG + chr1.2:79219517-79219536 None:intergenic 45.0%
! AAGCAAAAAGGTGCGTGTGT+TGG - chr1.2:79218475-79218494 MS.gene86918:intron 45.0%
! TTCTGAGCTCTGATGATCAC+TGG - chr1.2:79219447-79219466 MS.gene86918:CDS 45.0%
CATTAGGGACTAGGCTTTGC+AGG + chr1.2:79219122-79219141 None:intergenic 50.0%
CCTAGTCCCTAATGGAACCA+AGG - chr1.2:79219128-79219147 MS.gene86918:CDS 50.0%
CCTTGGTTCCATTAGGGACT+AGG + chr1.2:79219131-79219150 None:intergenic 50.0%
CTGCAAAGCCTAGTCCCTAA+TGG - chr1.2:79219120-79219139 MS.gene86918:CDS 50.0%
GGAGCAGAATTTGAGCTCAG+AGG - chr1.2:79218784-79218803 MS.gene86918:intron 50.0%
GGATATCAGCACCATGCTTG+AGG - chr1.2:79219238-79219257 MS.gene86918:CDS 50.0%
GTTCAAAAGCAACGCTGACG+AGG - chr1.2:79218742-79218761 MS.gene86918:CDS 50.0%
TCAAGGCCTAAGGAGGAATG+AGG + chr1.2:79219321-79219340 None:intergenic 50.0%
TCTAGGAGCTCGATGAAGGT+AGG - chr1.2:79218400-79218419 MS.gene86918:intron 50.0%
TGTCCTGGCCATGATGTAGA+TGG + chr1.2:79218058-79218077 None:intergenic 50.0%
TTGCACAGCTTCCTCAAGCA+TGG + chr1.2:79219252-79219271 None:intergenic 50.0%
AGGAGGTGACTTACTCCCTC+CGG + chr1.2:79218547-79218566 None:intergenic 55.0%
GGTTCTGCCTCTGATCCACA+AGG - chr1.2:79218914-79218933 MS.gene86918:intron 55.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 79217914 79219544 79217914 ID=MS.gene86918
chr1.2 mRNA 79217914 79219544 79217914 ID=MS.gene86918.t1;Parent=MS.gene86918
chr1.2 exon 79219041 79219544 79219041 ID=MS.gene86918.t1.exon1;Parent=MS.gene86918.t1
chr1.2 CDS 79219041 79219544 79219041 ID=cds.MS.gene86918.t1;Parent=MS.gene86918.t1
chr1.2 exon 79218509 79218766 79218509 ID=MS.gene86918.t1.exon2;Parent=MS.gene86918.t1
chr1.2 CDS 79218509 79218766 79218509 ID=cds.MS.gene86918.t1;Parent=MS.gene86918.t1
chr1.2 exon 79218309 79218374 79218309 ID=MS.gene86918.t1.exon3;Parent=MS.gene86918.t1
chr1.2 CDS 79218309 79218374 79218309 ID=cds.MS.gene86918.t1;Parent=MS.gene86918.t1
chr1.2 exon 79218157 79218222 79218157 ID=MS.gene86918.t1.exon4;Parent=MS.gene86918.t1
chr1.2 CDS 79218157 79218222 79218157 ID=cds.MS.gene86918.t1;Parent=MS.gene86918.t1
chr1.2 exon 79217914 79218012 79217914 ID=MS.gene86918.t1.exon5;Parent=MS.gene86918.t1
chr1.2 CDS 79217914 79218012 79217914 ID=cds.MS.gene86918.t1;Parent=MS.gene86918.t1
Gene Sequence

>MS.gene86918

ATGGATTCTGATGAGCAAAGTTGTGAAGAATGGAGTTCTCTTAGTGGATTTTACACAGCTGAGGAAGCTGATTTTATGGGCCAGTTACTTAATAACTTCCAAGTTTCTGAGCACCATTATGGAAATTTCAATTTAGAAATTCCATCTACATCATGGCCAGGACATGAATCCACAATAGTGAGCATGAATAGCAGTTCACATTTTCCTCAAAATGCTGATAATAGTAACACTGATGTTTTTAGTTTTTCACAAAGTAGCTCCATTTCTGATACTAGCAATATATTTCATAATACAAATGGTGGTAACATCTGTTTGAATGATCATGTAGCCAACATTGGCTACATGATTGCCAATTTTAGCACTTATAGTGTTCAAGGTCATGACAGCCAACAGATAACTGAAAACACTTCTGAAGAGTTTGGTAAAGATGTTTTGGAATCCGCGAAAGAGTGTATCAAGAACAACCTGGAAAAATCAGGAAAAAGATCTAGGAGCTCGATGAAGGTAGGACAACAAATATCACGTTTTTCTTTGTAAATTACTCCCTCTGGTATTATGTATAAGCAAAAAGGTGCGTGTGTTGGTCTAAATTTAGACCAAATACATGTTTCTATTTGTTTACATTTAAGACCGGAGGGAGTAAGTCACCTCCTGCTTTTTTTTATAGTCCTGGTGATATTGTGACAGGCATTTGGTTTTCTAGAAGAATTGATTCAATATGTTTAATTTTGTCTGGCTCTCATCATGATTTGATAATTTTGATTTAATGATTCCATAGGTACAAAAGAACAAGAGAAATGTGAAATCTAGGAAGAAACCAAAGTCGGAGTTCAAAAGCAACGCTGACGAGGATGAAAGTCATGATCTTCAGGAGCAGAATTTGAGCTCAGAGGATGATGATATCAATGCTTTAAAGAAGCTAAATGCAGGAACATCTTCAATCTTGAACCAGAATGATTCAACAGATTTGAAGTTAAAGGGAAAATCAAAATGTAATGGAGGTTCTGCCTCTGATCCACAAGGTGTCTATGCAAAAGTATGTCTGCCAATTGCATTTCCTAAAAATACCATTGCTAATAATTTTATGTCCTTGAATTTTTGTCCAAAGTACTGTGATTTTGAATTATTAAAGGATTAGATCTCAAGAGATTTTCATTTTGCAAAATGCAGAAAAGAAGAGAAAGAATAAATGAAAGATTGAAAATCCTGCAAAGCCTAGTCCCTAATGGAACCAAGGTAGCTTTCTCAATGACAATTCAACTATTTTTAAATAATTGGTTAAGATGCTAAAAATATCTAGTTTTCTTACTCATGAAATATAGGTGGATATCAGCACCATGCTTGAGGAAGCTGTGCAATATGTGAAGTTTTTACAGGTCCAAATTAAGGTAAAAACATAAGGATCCTCATTCCTCCTTAGGCCTTGATATGAATCATAAATTTAGTTCAGTGCAAAAAAATATCCATATTATATATTCTTGAAATATTGAGACTAATTTGTGCTTGTTCATATTTTGATTTGAAATGAACAGCTTCTGAGCTCTGATGATCACTGGATGTATGCTCCAATTGCTTACAATGGAATGAACATTGGACTAAACCTCAACATTATCCCAACCGAACTACCATAG
Protein sequence

>MS.gene86918.t1

MDSDEQSCEEWSSLSGFYTAEEADFMGQLLNNFQVSEHHYGNFNLEIPSTSWPGHESTIVSMNSSSHFPQNADNSNTDVFSFSQSSSISDTSNIFHNTNGGNICLNDHVANIGYMIANFSTYSVQGHDSQQITENTSEEFGKDVLESAKECIKNNLEKSGKRSRSSMKVQKNKRNVKSRKKPKSEFKSNADEDESHDLQEQNLSSEDDDINALKKLNAGTSSILNQNDSTDLKLKGKSKCNGGSASDPQGVYAKKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQVQIKLLSSDDHWMYAPIAYNGMNIGLNLNIIPTELP