Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87410.t1 | XP_024629013.1 | 95 | 523 | 20 | 2 | 1 | 521 | 1 | 519 | 2.70E-239 | 837.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87410.t1 | Q9SCQ6 | 52.1 | 528 | 162 | 11 | 2 | 519 | 3 | 449 | 2.3e-125 | 450.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87410.t1 | A0A396GNR0 | 95.0 | 523 | 20 | 2 | 1 | 521 | 1 | 519 | 2.0e-239 | 837.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene87410.t1 | TF | C2H2 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87410.t1 | MTR_2g099990 | 75.120 | 209 | 36 | 1 | 4 | 196 | 1 | 209 | 1.73e-117 | 355 |
MS.gene87410.t1 | MTR_8g017210 | 76.077 | 209 | 35 | 2 | 3 | 196 | 17 | 225 | 6.62e-117 | 355 |
MS.gene87410.t1 | MTR_4g059870 | 76.842 | 190 | 39 | 2 | 11 | 195 | 12 | 201 | 5.37e-111 | 339 |
MS.gene87410.t1 | MTR_1g094115 | 80.814 | 172 | 33 | 0 | 31 | 202 | 45 | 216 | 9.17e-109 | 335 |
MS.gene87410.t1 | MTR_1g016010 | 85.366 | 164 | 23 | 1 | 32 | 194 | 40 | 203 | 3.76e-107 | 327 |
MS.gene87410.t1 | MTR_1g112270 | 83.439 | 157 | 26 | 0 | 36 | 192 | 47 | 203 | 4.58e-104 | 323 |
MS.gene87410.t1 | MTR_2g090745 | 59.220 | 282 | 91 | 5 | 43 | 300 | 17 | 298 | 2.03e-102 | 315 |
MS.gene87410.t1 | MTR_1g112270 | 77.976 | 168 | 26 | 1 | 36 | 192 | 47 | 214 | 3.36e-100 | 314 |
MS.gene87410.t1 | MTR_2g093960 | 77.576 | 165 | 36 | 1 | 32 | 195 | 31 | 195 | 1.13e-99 | 307 |
MS.gene87410.t1 | MTR_2g099990 | 88.571 | 140 | 16 | 0 | 57 | 196 | 1 | 140 | 5.56e-97 | 300 |
MS.gene87410.t1 | MTR_1g094115 | 44.236 | 373 | 165 | 6 | 31 | 391 | 45 | 386 | 4.05e-94 | 296 |
MS.gene87410.t1 | MTR_2g017720 | 81.739 | 115 | 16 | 1 | 43 | 157 | 323 | 432 | 4.08e-60 | 204 |
MS.gene87410.t1 | MTR_3g102000 | 72.727 | 99 | 20 | 2 | 60 | 154 | 36 | 131 | 8.91e-44 | 155 |
MS.gene87410.t1 | MTR_5g030560 | 84.444 | 45 | 7 | 0 | 43 | 87 | 16 | 60 | 2.85e-21 | 88.2 |
MS.gene87410.t1 | MTR_1g093095 | 32.680 | 153 | 90 | 4 | 56 | 196 | 109 | 260 | 7.15e-18 | 84.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87410.t1 | AT3G50700 | 56.238 | 521 | 151 | 14 | 2 | 519 | 3 | 449 | 1.40e-179 | 512 |
MS.gene87410.t1 | AT5G66730 | 57.885 | 539 | 167 | 15 | 2 | 521 | 3 | 500 | 1.03e-177 | 509 |
MS.gene87410.t1 | AT1G03840 | 86.228 | 167 | 23 | 0 | 29 | 195 | 37 | 203 | 3.45e-111 | 340 |
MS.gene87410.t1 | AT5G44160 | 78.351 | 194 | 40 | 1 | 4 | 195 | 6 | 199 | 6.99e-111 | 337 |
MS.gene87410.t1 | AT1G55110 | 72.596 | 208 | 43 | 4 | 3 | 196 | 20 | 227 | 3.66e-108 | 330 |
MS.gene87410.t1 | AT1G55110 | 72.596 | 208 | 43 | 4 | 3 | 196 | 20 | 227 | 3.66e-108 | 330 |
MS.gene87410.t1 | AT1G55110 | 72.596 | 208 | 43 | 4 | 3 | 196 | 20 | 227 | 3.66e-108 | 330 |
MS.gene87410.t1 | AT1G03840 | 85.030 | 167 | 23 | 1 | 29 | 195 | 37 | 201 | 8.23e-108 | 331 |
MS.gene87410.t1 | AT3G13810 | 70.233 | 215 | 42 | 2 | 3 | 195 | 19 | 233 | 2.37e-106 | 327 |
MS.gene87410.t1 | AT3G13810 | 70.233 | 215 | 42 | 2 | 3 | 195 | 19 | 233 | 2.37e-106 | 327 |
MS.gene87410.t1 | AT3G13810 | 70.233 | 215 | 42 | 2 | 3 | 195 | 14 | 228 | 2.68e-106 | 327 |
MS.gene87410.t1 | AT3G13810 | 70.561 | 214 | 41 | 2 | 4 | 195 | 1 | 214 | 3.10e-106 | 327 |
MS.gene87410.t1 | AT2G02080 | 78.916 | 166 | 35 | 0 | 31 | 196 | 52 | 217 | 3.39e-106 | 327 |
MS.gene87410.t1 | AT2G02080 | 78.916 | 166 | 35 | 0 | 31 | 196 | 52 | 217 | 3.39e-106 | 327 |
MS.gene87410.t1 | AT2G02080 | 78.916 | 166 | 35 | 0 | 31 | 196 | 52 | 217 | 3.39e-106 | 327 |
MS.gene87410.t1 | AT2G02080 | 78.916 | 166 | 35 | 0 | 31 | 196 | 52 | 217 | 3.39e-106 | 327 |
MS.gene87410.t1 | AT4G02670 | 73.737 | 198 | 42 | 3 | 8 | 195 | 19 | 216 | 1.65e-105 | 322 |
MS.gene87410.t1 | AT4G02670 | 73.737 | 198 | 42 | 3 | 8 | 195 | 21 | 218 | 1.74e-105 | 322 |
MS.gene87410.t1 | AT1G14580 | 76.608 | 171 | 40 | 0 | 26 | 196 | 46 | 216 | 4.15e-105 | 323 |
MS.gene87410.t1 | AT1G14580 | 76.608 | 171 | 40 | 0 | 26 | 196 | 46 | 216 | 4.15e-105 | 323 |
MS.gene87410.t1 | AT1G14580 | 76.608 | 171 | 40 | 0 | 26 | 196 | 60 | 230 | 9.29e-105 | 322 |
MS.gene87410.t1 | AT5G03150 | 84.756 | 164 | 24 | 1 | 33 | 195 | 53 | 216 | 1.78e-104 | 322 |
MS.gene87410.t1 | AT3G45260 | 81.098 | 164 | 30 | 1 | 33 | 195 | 39 | 202 | 5.54e-104 | 319 |
MS.gene87410.t1 | AT3G45260 | 81.098 | 164 | 30 | 1 | 33 | 195 | 39 | 202 | 5.54e-104 | 319 |
MS.gene87410.t1 | AT5G44160 | 88.235 | 153 | 18 | 0 | 43 | 195 | 8 | 160 | 8.26e-103 | 315 |
MS.gene87410.t1 | AT2G02070 | 80.368 | 163 | 32 | 0 | 33 | 195 | 52 | 214 | 9.36e-103 | 321 |
MS.gene87410.t1 | AT2G02070 | 80.368 | 163 | 32 | 0 | 33 | 195 | 52 | 214 | 9.36e-103 | 321 |
MS.gene87410.t1 | AT5G60470 | 77.246 | 167 | 37 | 1 | 30 | 195 | 41 | 207 | 2.71e-100 | 310 |
MS.gene87410.t1 | AT5G60470 | 77.246 | 167 | 37 | 1 | 30 | 195 | 37 | 203 | 4.15e-100 | 310 |
MS.gene87410.t1 | AT3G13810 | 87.582 | 153 | 18 | 1 | 44 | 195 | 68 | 220 | 8.84e-99 | 307 |
MS.gene87410.t1 | AT3G13810 | 87.582 | 153 | 18 | 1 | 44 | 195 | 82 | 234 | 9.26e-99 | 308 |
MS.gene87410.t1 | AT5G60470 | 70.520 | 173 | 50 | 1 | 24 | 195 | 26 | 198 | 2.58e-94 | 294 |
MS.gene87410.t1 | AT2G02080 | 80.714 | 140 | 27 | 0 | 57 | 196 | 1 | 140 | 1.52e-91 | 287 |
MS.gene87410.t1 | AT2G02080 | 80.714 | 140 | 27 | 0 | 57 | 196 | 1 | 140 | 1.52e-91 | 287 |
MS.gene87410.t1 | AT1G25250 | 68.153 | 157 | 47 | 2 | 33 | 186 | 33 | 189 | 2.99e-75 | 243 |
MS.gene87410.t1 | AT1G68130 | 67.308 | 156 | 49 | 2 | 33 | 186 | 41 | 196 | 2.73e-74 | 241 |
MS.gene87410.t1 | AT2G01940 | 65.190 | 158 | 53 | 2 | 33 | 188 | 44 | 201 | 1.93e-73 | 240 |
MS.gene87410.t1 | AT1G25250 | 68.456 | 149 | 44 | 2 | 41 | 186 | 18 | 166 | 8.56e-72 | 233 |
MS.gene87410.t1 | AT2G01940 | 63.522 | 159 | 55 | 3 | 33 | 188 | 44 | 202 | 3.13e-69 | 229 |
MS.gene87410.t1 | AT1G25250 | 67.568 | 111 | 33 | 2 | 79 | 186 | 1 | 111 | 1.12e-47 | 168 |
MS.gene87410.t1 | AT1G68130 | 65.455 | 110 | 36 | 2 | 79 | 186 | 1 | 110 | 1.68e-46 | 166 |
MS.gene87410.t1 | AT2G01940 | 64.286 | 112 | 38 | 2 | 79 | 188 | 1 | 112 | 2.10e-46 | 166 |
MS.gene87410.t1 | AT5G22890 | 34.000 | 150 | 85 | 3 | 47 | 182 | 202 | 351 | 4.33e-23 | 101 |
MS.gene87410.t1 | AT1G34370 | 33.962 | 159 | 91 | 3 | 41 | 185 | 13 | 171 | 5.07e-23 | 99.8 |
MS.gene87410.t1 | AT1G34370 | 33.962 | 159 | 91 | 3 | 41 | 185 | 223 | 381 | 9.23e-23 | 102 |
MS.gene87410.t1 | AT1G34370 | 33.962 | 159 | 91 | 3 | 41 | 185 | 223 | 381 | 9.23e-23 | 102 |
MS.gene87410.t1 | AT1G13290 | 34.810 | 158 | 91 | 6 | 56 | 202 | 95 | 251 | 2.43e-19 | 89.4 |
MS.gene87410.t1 | AT1G34790 | 34.667 | 150 | 88 | 4 | 45 | 185 | 128 | 276 | 2.40e-17 | 83.2 |
MS.gene87410.t1 | AT1G51220 | 33.094 | 139 | 83 | 4 | 56 | 185 | 172 | 309 | 3.37e-17 | 83.6 |
MS.gene87410.t1 | AT3G57670 | 33.813 | 139 | 82 | 4 | 56 | 185 | 211 | 348 | 5.07e-17 | 83.6 |
MS.gene87410.t1 | AT3G20880 | 33.813 | 139 | 82 | 4 | 56 | 185 | 250 | 387 | 7.51e-17 | 83.2 |
MS.gene87410.t1 | AT1G08290 | 36.296 | 135 | 75 | 4 | 61 | 185 | 179 | 312 | 1.06e-16 | 82.0 |
Find 124 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCCTTGTGACGGCGATTC+TGG | 0.135600 | 8.3:-26160491 | MS.gene87410:CDS |
CATGATCCTTCTAGAGCTTT+AGG | 0.245902 | 8.3:-26162172 | MS.gene87410:CDS |
GCCTCTCTGCTTCGCGGGCT+TGG | 0.251735 | 8.3:-26160629 | MS.gene87410:CDS |
TAATTTGTACCTGGCATTCC+TGG | 0.277575 | 8.3:+26162481 | None:intergenic |
AGAGCTTTAGGTGATTTAAC+TGG | 0.295896 | 8.3:-26162160 | MS.gene87410:CDS |
AAAGATCAAGTAAAGAAATT+AGG | 0.296295 | 8.3:-26162234 | MS.gene87410:CDS |
GACAATGTTTCCACAGCTTC+AGG | 0.299307 | 8.3:-26162583 | MS.gene87410:CDS |
AGATTGAACAGCATATTTCT+TGG | 0.304180 | 8.3:+26162078 | None:intergenic |
CTAGGATTGGGGATGGCTGC+TGG | 0.321231 | 8.3:-26160404 | MS.gene87410:CDS |
CGGCATTCAGTGACCTAATT+AGG | 0.321846 | 8.3:-26160865 | MS.gene87410:CDS |
ACTCTTGATTTCCTAGGATT+GGG | 0.333570 | 8.3:-26160416 | MS.gene87410:CDS |
TACATCCCATGGACCTAATT+AGG | 0.346102 | 8.3:+26160852 | None:intergenic |
TTGGGGACTCCCTCAATGTT+TGG | 0.357407 | 8.3:-26160452 | MS.gene87410:CDS |
AACTCTTGATTTCCTAGGAT+TGG | 0.365068 | 8.3:-26160417 | MS.gene87410:CDS |
AGAGCAATCACCTCTGCTTC+TGG | 0.372321 | 8.3:+26162379 | None:intergenic |
GAGTTCTCTGGCAAAGATAT+TGG | 0.378609 | 8.3:-26160284 | MS.gene87410:CDS |
CAAGTAAAGAAATTAGGAAA+AGG | 0.395504 | 8.3:-26162228 | MS.gene87410:CDS |
ATGGCTGCTGGTGGTAGTGC+CGG | 0.397095 | 8.3:-26160392 | MS.gene87410:CDS |
TCTTCTGCTTCCACTTCATC+TGG | 0.404493 | 8.3:-26160596 | MS.gene87410:CDS |
AGTTTAGTTTCAGCAGGACT+TGG | 0.406784 | 8.3:-26160521 | MS.gene87410:CDS |
ACCGCAGCAGCCGCATCCTT+TGG | 0.413731 | 8.3:-26160314 | MS.gene87410:CDS |
CAGACAACTCTTGATTTCCT+AGG | 0.415465 | 8.3:-26160422 | MS.gene87410:CDS |
GGACTAAAGGAATTGATGTT+GGG | 0.416175 | 8.3:-26160470 | MS.gene87410:CDS |
GATAGCCTGCATTGGGGTCT+CGG | 0.418830 | 8.3:-26160566 | MS.gene87410:CDS |
TGTGGTTCCTCTATGATTTG+TGG | 0.421612 | 8.3:+26161046 | None:intergenic |
AATATGCTGTTCAATCTGAT+TGG | 0.427517 | 8.3:-26162072 | MS.gene87410:CDS |
TTTGTAGCTAACAACGTTGT+TGG | 0.437085 | 8.3:+26162352 | None:intergenic |
AAAGCTCACTCTAAAGTTTG+TGG | 0.439997 | 8.3:-26162049 | MS.gene87410:CDS |
CAAACGCCTCTCTGCTTCGC+GGG | 0.440537 | 8.3:-26160634 | MS.gene87410:CDS |
AAGTAAAGAAATTAGGAAAA+GGG | 0.440652 | 8.3:-26162227 | MS.gene87410:CDS |
AATTGGCGGTGGCAGTGGTT+TGG | 0.451878 | 8.3:-26160342 | MS.gene87410:CDS |
GCATTGGGGTCTCGGACAAA+TGG | 0.454354 | 8.3:-26160558 | MS.gene87410:CDS |
AATGCAGTGGCAGACATTGC+GGG | 0.454587 | 8.3:+26160692 | None:intergenic |
TCAACAAGATAGCCTGCATT+GGG | 0.455422 | 8.3:-26160573 | MS.gene87410:CDS |
GGTTCTAGTTTAGTTTCAGC+AGG | 0.456585 | 8.3:-26160527 | MS.gene87410:CDS |
TGATGAACACAAGTTGGTTC+AGG | 0.461372 | 8.3:+26162193 | None:intergenic |
GATCTTTGTCTCAGTTTCCA+TGG | 0.464582 | 8.3:+26162250 | None:intergenic |
TCTGCACTTATCACATCAAT+TGG | 0.468012 | 8.3:-26160359 | MS.gene87410:CDS |
TAGTGGTGTGTCCTCTGCTT+TGG | 0.468292 | 8.3:-26161678 | MS.gene87410:CDS |
TTTGGTAATGGAGAGTTCTC+TGG | 0.469917 | 8.3:-26160296 | MS.gene87410:CDS |
AAATCACCTAAAGCTCTAGA+AGG | 0.470379 | 8.3:+26162166 | None:intergenic |
ACATCAATTGGCGGTGGCAG+TGG | 0.470770 | 8.3:-26160347 | MS.gene87410:CDS |
TGGACTAAAGGAATTGATGT+TGG | 0.472296 | 8.3:-26160471 | MS.gene87410:CDS |
GCTGATGTGTTGGCACGTAT+TGG | 0.475745 | 8.3:+26160717 | None:intergenic |
GTTTCAGCAGGACTTGGACT+AGG | 0.476162 | 8.3:-26160515 | MS.gene87410:CDS |
CTTTGCCTCTCGACTAATCA+TGG | 0.477522 | 8.3:-26160776 | MS.gene87410:CDS |
CAGTGACCTAATTAGGTCCA+TGG | 0.481145 | 8.3:-26160858 | MS.gene87410:CDS |
AAATCAAGAGTTGTCTGCTT+AGG | 0.482911 | 8.3:+26160428 | None:intergenic |
GAAGCTAGCATCTCTTCATC+TGG | 0.484549 | 8.3:-26162559 | MS.gene87410:CDS |
TTCGAAGCCGGTGTCGATGC+CGG | 0.487898 | 8.3:-26161744 | MS.gene87410:CDS |
ACAAACGCCTCTCTGCTTCG+CGG | 0.487979 | 8.3:-26160635 | MS.gene87410:CDS |
AAATCTCAGAATCAAGCTGT+TGG | 0.498734 | 8.3:-26161809 | MS.gene87410:CDS |
AGAAATCTCCCAGGAATGCC+AGG | 0.500143 | 8.3:-26162490 | MS.gene87410:intron |
TTCTGCGAGTCTCCAACCTC+AGG | 0.501471 | 8.3:-26160891 | MS.gene87410:CDS |
GGCTGTGCTACTACCAGCAC+TGG | 0.506941 | 8.3:-26160953 | MS.gene87410:CDS |
CAGCAGCCATCCCCAATCCT+AGG | 0.507214 | 8.3:+26160405 | None:intergenic |
GTCAACAAGATAGCCTGCAT+TGG | 0.514883 | 8.3:-26160574 | MS.gene87410:CDS |
ACATTGTCTAAATCAACCAT+TGG | 0.516475 | 8.3:+26162598 | None:intergenic |
AATTTGTACCTGGCATTCCT+GGG | 0.519747 | 8.3:+26162482 | None:intergenic |
TAATTCAGAATCTGATTCAA+AGG | 0.520820 | 8.3:-26161780 | MS.gene87410:CDS |
AATCTCAGAATCAAGCTGTT+GGG | 0.520944 | 8.3:-26161808 | MS.gene87410:CDS |
GCTCGCAAACACGCCAGTGC+TGG | 0.524696 | 8.3:+26160940 | None:intergenic |
TGATTTCCTAGGATTGGGGA+TGG | 0.525019 | 8.3:-26160411 | MS.gene87410:CDS |
AGAGAGATCGCCTCGGACGA+TGG | 0.526923 | 8.3:+26160797 | None:intergenic |
ACTACTCCTCAGTCAAATAG+TGG | 0.528176 | 8.3:-26161695 | MS.gene87410:CDS |
GCAGCCGCATCCTTTGGTAA+TGG | 0.530247 | 8.3:-26160308 | MS.gene87410:CDS |
CTCTTGATTTCCTAGGATTG+GGG | 0.537741 | 8.3:-26160415 | MS.gene87410:CDS |
TGCTTAGGACCAAACATTGA+GGG | 0.541653 | 8.3:+26160443 | None:intergenic |
ATTGCGGGCGGCTGATGTGT+TGG | 0.544981 | 8.3:+26160707 | None:intergenic |
TGTGTGAAATATGTAACAAA+GGG | 0.546390 | 8.3:-26162321 | MS.gene87410:CDS |
GAGCTTTAGGTGATTTAACT+GGG | 0.546954 | 8.3:-26162159 | MS.gene87410:CDS |
TTTGACCGGTGATTCGAAGC+CGG | 0.547642 | 8.3:-26161756 | MS.gene87410:CDS |
CGACACCGGCTTCGAATCAC+CGG | 0.547911 | 8.3:+26161751 | None:intergenic |
GCTGGTGGTAGTGCCGGTGG+AGG | 0.548542 | 8.3:-26160386 | MS.gene87410:CDS |
TGACGGCGATTCTGGACTAA+AGG | 0.548568 | 8.3:-26160483 | MS.gene87410:CDS |
GCTGCTGGTGGTAGTGCCGG+TGG | 0.551709 | 8.3:-26160389 | MS.gene87410:CDS |
TGAATGCCGGTGCCTGAGGT+TGG | 0.552958 | 8.3:+26160879 | None:intergenic |
GTGTGTGAAATATGTAACAA+AGG | 0.553618 | 8.3:-26162322 | MS.gene87410:CDS |
ACCAAAGGATGCGGCTGCTG+CGG | 0.554404 | 8.3:+26160313 | None:intergenic |
CTGCTTAGGACCAAACATTG+AGG | 0.555637 | 8.3:+26160442 | None:intergenic |
TTTGTCCGAGACCCCAATGC+AGG | 0.560302 | 8.3:+26160561 | None:intergenic |
GGTTCCTCTATGATTTGTGG+TGG | 0.561548 | 8.3:+26161049 | None:intergenic |
GGATCATGATGAACACAAGT+TGG | 0.562485 | 8.3:+26162187 | None:intergenic |
AGAGAGTATAAATGTGATTG+TGG | 0.563676 | 8.3:-26162022 | MS.gene87410:CDS |
CTAATTAGGTCACTGAATGC+CGG | 0.565545 | 8.3:+26160866 | None:intergenic |
ATCACTGCCGGCATCGACAC+CGG | 0.568593 | 8.3:+26161737 | None:intergenic |
GAAACTAAACTAGAACCCTC+TGG | 0.570954 | 8.3:+26160533 | None:intergenic |
CTCTCCATTACCAAAGGATG+CGG | 0.572516 | 8.3:+26160304 | None:intergenic |
GCACTTATCACATCAATTGG+CGG | 0.574617 | 8.3:-26160356 | MS.gene87410:CDS |
ACGAGGATCGGTACATCCCA+TGG | 0.574767 | 8.3:+26160841 | None:intergenic |
GCTAGCTTCACCTGAAGCTG+TGG | 0.576380 | 8.3:+26162573 | None:intergenic |
ATCTTGTTGACCAGATGAAG+TGG | 0.580608 | 8.3:+26160586 | None:intergenic |
AGTGACCTAATTAGGTCCAT+GGG | 0.583377 | 8.3:-26160857 | MS.gene87410:CDS |
GGAGGAGCTGAGAAATCTGT+AGG | 0.585353 | 8.3:+26160818 | None:intergenic |
GAAATCTGTAGGACGAGGAT+CGG | 0.590451 | 8.3:+26160829 | None:intergenic |
TAATGCAGTGGCAGACATTG+CGG | 0.592309 | 8.3:+26160691 | None:intergenic |
GGACTAGGTCTTCCTTGTGA+CGG | 0.592837 | 8.3:-26160500 | MS.gene87410:CDS |
AATCTTCAACTACATAGAAG+AGG | 0.593928 | 8.3:-26162283 | MS.gene87410:CDS |
AGTCCAGAATCGCCGTCACA+AGG | 0.597637 | 8.3:+26160488 | None:intergenic |
CTCAGCTCCTCCATCGTCCG+AGG | 0.601921 | 8.3:-26160807 | MS.gene87410:CDS |
GAGTCTCCAACCTCAGGCAC+CGG | 0.602429 | 8.3:-26160885 | MS.gene87410:CDS |
GGATTGGGGATGGCTGCTGG+TGG | 0.602431 | 8.3:-26160401 | MS.gene87410:CDS |
AAGTGCAGACAAGCCTCCAC+CGG | 0.604756 | 8.3:+26160373 | None:intergenic |
GACTAAAGGAATTGATGTTG+GGG | 0.606985 | 8.3:-26160469 | MS.gene87410:CDS |
GCAGTAGTAGTAATCACTGC+CGG | 0.607099 | 8.3:+26161725 | None:intergenic |
GCTTTGGAGACTCAGAAGCT+AGG | 0.609936 | 8.3:-26161662 | MS.gene87410:intron |
CTTATCACATCAATTGGCGG+TGG | 0.618131 | 8.3:-26160353 | MS.gene87410:CDS |
AAATCCACCACAAATCATAG+AGG | 0.618977 | 8.3:-26161053 | MS.gene87410:CDS |
TCACTGAATGCCGGTGCCTG+AGG | 0.621303 | 8.3:+26160875 | None:intergenic |
GAAGAGGACATAATCTACCA+TGG | 0.626841 | 8.3:-26162267 | MS.gene87410:CDS |
AGTACTAGCTCAACAAGCAA+CGG | 0.630248 | 8.3:-26160974 | MS.gene87410:CDS |
GCTGAGAAATCTGTAGGACG+AGG | 0.633981 | 8.3:+26160824 | None:intergenic |
ATGATCCATGATTAGTCGAG+AGG | 0.637718 | 8.3:+26160771 | None:intergenic |
GAGATCGCCTCGGACGATGG+AGG | 0.640921 | 8.3:+26160800 | None:intergenic |
TCTCGGACAAATGGAACCAG+AGG | 0.640999 | 8.3:-26160549 | MS.gene87410:CDS |
AGAGAACTCTCCATTACCAA+AGG | 0.646442 | 8.3:+26160298 | None:intergenic |
TCCAAGCCCGCGAAGCAGAG+AGG | 0.660190 | 8.3:+26160628 | None:intergenic |
GAGGCAAAGAGAGATCGCCT+CGG | 0.672821 | 8.3:+26160790 | None:intergenic |
CTCGGACAAATGGAACCAGA+GGG | 0.680399 | 8.3:-26160548 | MS.gene87410:CDS |
CTTCTGAGTCTCCAAAGCAG+AGG | 0.681133 | 8.3:+26161667 | None:intergenic |
GCAGTGGCAGACATTGCGGG+CGG | 0.682139 | 8.3:+26160695 | None:intergenic |
CAACAAGATAGCCTGCATTG+GGG | 0.703664 | 8.3:-26160572 | MS.gene87410:CDS |
GACACACCACTATTTGACTG+AGG | 0.723609 | 8.3:+26161689 | None:intergenic |
GTAGTAGTAACAACAACTTG+TGG | 0.766984 | 8.3:+26161028 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTATTAAATTTTTATTTT+TGG | - | chr8.3:26160888-26160907 | MS.gene87410:CDS | 0.0% |
!! | AAAAATCAAAATATAGAATA+AGG | + | chr8.3:26161778-26161797 | None:intergenic | 10.0% |
!! | TTTATATGTTTATGAAAAAT+GGG | - | chr8.3:26160927-26160946 | MS.gene87410:CDS | 10.0% |
!!! | TTTTATATGTTTATGAAAAA+TGG | - | chr8.3:26160926-26160945 | MS.gene87410:CDS | 10.0% |
!! | AAATTTAATAAAAAAGAACC+TGG | + | chr8.3:26160881-26160900 | None:intergenic | 15.0% |
!! | AATTATAATCATCAACTAAT+AGG | + | chr8.3:26161709-26161728 | None:intergenic | 15.0% |
!! | ATTATAATCATCAACTAATA+GGG | + | chr8.3:26161708-26161727 | None:intergenic | 15.0% |
!! | TGAAAATAAATCACTTAAAA+AGG | - | chr8.3:26161480-26161499 | MS.gene87410:intron | 15.0% |
!! | TTTAATGTAACATAAAAGAA+AGG | - | chr8.3:26161629-26161648 | MS.gene87410:intron | 15.0% |
!!! | AATATTTATTAATTTGTACC+TGG | + | chr8.3:26160397-26160416 | None:intergenic | 15.0% |
!!! | CAAATTCAAAATTTTGTTTT+TGG | - | chr8.3:26161336-26161355 | MS.gene87410:intron | 15.0% |
!!! | TTTTTTATGTTTGATTTTGA+AGG | - | chr8.3:26160977-26160996 | MS.gene87410:CDS | 15.0% |
!! | AAAGATCAAGTAAAGAAATT+AGG | - | chr8.3:26160632-26160651 | MS.gene87410:CDS | 20.0% |
!! | AAGTAAAGAAATTAGGAAAA+GGG | - | chr8.3:26160639-26160658 | MS.gene87410:CDS | 20.0% |
! | AAAAAAGAACCTGGAAAAAA+CGG | + | chr8.3:26160872-26160891 | None:intergenic | 25.0% |
! | CAAGTAAAGAAATTAGGAAA+AGG | - | chr8.3:26160638-26160657 | MS.gene87410:CDS | 25.0% |
! | GTTTGATCTAAATTATGCAT+TGG | - | chr8.3:26161517-26161536 | MS.gene87410:intron | 25.0% |
! | TAATTCAGAATCTGATTCAA+AGG | - | chr8.3:26161086-26161105 | MS.gene87410:intron | 25.0% |
! | TGTGTGAAATATGTAACAAA+GGG | - | chr8.3:26160545-26160564 | MS.gene87410:CDS | 25.0% |
!!! | AAAGTGCAATTTTTGTTTTC+TGG | - | chr8.3:26161259-26161278 | MS.gene87410:intron | 25.0% |
!!! | AAGTGCAATTTTTGTTTTCT+GGG | - | chr8.3:26161260-26161279 | MS.gene87410:intron | 25.0% |
!!! | AGAAGATTTGTTTTTAAGAG+TGG | - | chr8.3:26161568-26161587 | MS.gene87410:intron | 25.0% |
!!! | AGATTTCTTTTTTTCTTGGT+GGG | + | chr8.3:26160364-26160383 | None:intergenic | 25.0% |
!!! | GTGTTTAGTATTTTTTTGTC+TGG | - | chr8.3:26161378-26161397 | MS.gene87410:intron | 25.0% |
!!! | TGTTTTTGGTGTTATTTATG+TGG | - | chr8.3:26161350-26161369 | MS.gene87410:intron | 25.0% |
!!! | TTATGTTTGATTTTGAAGGA+GGG | - | chr8.3:26160981-26161000 | MS.gene87410:CDS | 25.0% |
!!! | TTTATGTTTGATTTTGAAGG+AGG | - | chr8.3:26160980-26160999 | MS.gene87410:CDS | 25.0% |
AACACATAGACAAGTAAAGT+TGG | + | chr8.3:26161657-26161676 | None:intergenic | 30.0% | |
AAGAAAAAAAGAAATCTCCC+AGG | - | chr8.3:26160367-26160386 | MS.gene87410:CDS | 30.0% | |
AATATGCTGTTCAATCTGAT+TGG | - | chr8.3:26160794-26160813 | MS.gene87410:CDS | 30.0% | |
AATCTTCAACTACATAGAAG+AGG | - | chr8.3:26160583-26160602 | MS.gene87410:CDS | 30.0% | |
AGATTGAACAGCATATTTCT+TGG | + | chr8.3:26160791-26160810 | None:intergenic | 30.0% | |
GTGTGTGAAATATGTAACAA+AGG | - | chr8.3:26160544-26160563 | MS.gene87410:CDS | 30.0% | |
! | AAGCACTTTTGTAGAAAACA+TGG | - | chr8.3:26160736-26160755 | MS.gene87410:CDS | 30.0% |
! | AGAGAGTATAAATGTGATTG+TGG | - | chr8.3:26160844-26160863 | MS.gene87410:CDS | 30.0% |
!! | AAATTATGCATTGGTTGTCA+AGG | - | chr8.3:26161526-26161545 | MS.gene87410:intron | 30.0% |
!!! | AATCATGGATCATCGATTTT+CGG | - | chr8.3:26162105-26162124 | MS.gene87410:CDS | 30.0% |
!!! | GAGATTTCTTTTTTTCTTGG+TGG | + | chr8.3:26160365-26160384 | None:intergenic | 30.0% |
!!! | GTTTTTTGTCATGTTTGATG+TGG | - | chr8.3:26161296-26161315 | MS.gene87410:intron | 30.0% |
!!! | TGGGAGATTTCTTTTTTTCT+TGG | + | chr8.3:26160368-26160387 | None:intergenic | 30.0% |
AAATCAAGAGTTGTCTGCTT+AGG | + | chr8.3:26162441-26162460 | None:intergenic | 35.0% | |
AAATCCACCACAAATCATAG+AGG | - | chr8.3:26161813-26161832 | MS.gene87410:CDS | 35.0% | |
AAATCTCAGAATCAAGCTGT+TGG | - | chr8.3:26161057-26161076 | MS.gene87410:CDS | 35.0% | |
AACTCTTGATTTCCTAGGAT+TGG | - | chr8.3:26162449-26162468 | MS.gene87410:intron | 35.0% | |
AATCTCAGAATCAAGCTGTT+GGG | - | chr8.3:26161058-26161077 | MS.gene87410:CDS | 35.0% | |
ACTCTTGATTTCCTAGGATT+GGG | - | chr8.3:26162450-26162469 | MS.gene87410:intron | 35.0% | |
ACTTCAAAAAGCAGCTCAAA+TGG | - | chr8.3:26162197-26162216 | MS.gene87410:CDS | 35.0% | |
ACTTGTCTATGTGTTATGAG+TGG | - | chr8.3:26161662-26161681 | MS.gene87410:intron | 35.0% | |
CTTCAAAAAGCAGCTCAAAT+GGG | - | chr8.3:26162198-26162217 | MS.gene87410:CDS | 35.0% | |
GAAAACATGGTGAGAAAAAG+TGG | - | chr8.3:26160749-26160768 | MS.gene87410:CDS | 35.0% | |
GACTAAAGGAATTGATGTTG+GGG | - | chr8.3:26162397-26162416 | MS.gene87410:intron | 35.0% | |
GGACTAAAGGAATTGATGTT+GGG | - | chr8.3:26162396-26162415 | MS.gene87410:intron | 35.0% | |
GTAGTAGTAACAACAACTTG+TGG | + | chr8.3:26161841-26161860 | None:intergenic | 35.0% | |
TCTGCACTTATCACATCAAT+TGG | - | chr8.3:26162507-26162526 | MS.gene87410:CDS | 35.0% | |
TGGACTAAAGGAATTGATGT+TGG | - | chr8.3:26162395-26162414 | MS.gene87410:intron | 35.0% | |
TTTGTAGCTAACAACGTTGT+TGG | + | chr8.3:26160517-26160536 | None:intergenic | 35.0% | |
!! | AAAGCTCACTCTAAAGTTTG+TGG | - | chr8.3:26160817-26160836 | MS.gene87410:CDS | 35.0% |
!! | AAATCACCTAAAGCTCTAGA+AGG | + | chr8.3:26160703-26160722 | None:intergenic | 35.0% |
!! | AGAGCTTTAGGTGATTTAAC+TGG | - | chr8.3:26160706-26160725 | MS.gene87410:CDS | 35.0% |
!! | GAGCTTTAGGTGATTTAACT+GGG | - | chr8.3:26160707-26160726 | MS.gene87410:CDS | 35.0% |
!! | TCTGATTCAAAGGTTTTGAC+CGG | - | chr8.3:26161096-26161115 | MS.gene87410:intron | 35.0% |
!! | TGGTGTTATTTATGTGGTCT+TGG | - | chr8.3:26161356-26161375 | MS.gene87410:intron | 35.0% |
!!! | ATGATTTGTGGTGGATTTTC+TGG | + | chr8.3:26161811-26161830 | None:intergenic | 35.0% |
!!! | CTTTTTTTCTTGGTGGGTTT+TGG | + | chr8.3:26160358-26160377 | None:intergenic | 35.0% |
!!! | GACTTGTTTTTGTGAGAAAC+AGG | - | chr8.3:26161417-26161436 | MS.gene87410:intron | 35.0% |
!!! | TGCTTTTTGAAGTAATGCAG+TGG | + | chr8.3:26162190-26162209 | None:intergenic | 35.0% |
AAGGAAAAGCAAAGCAAAGC+AGG | + | chr8.3:26161759-26161778 | None:intergenic | 40.0% | |
AATTTGTACCTGGCATTCCT+GGG | + | chr8.3:26160387-26160406 | None:intergenic | 40.0% | |
ACTACTCCTCAGTCAAATAG+TGG | - | chr8.3:26161171-26161190 | MS.gene87410:intron | 40.0% | |
AGAGAACTCTCCATTACCAA+AGG | + | chr8.3:26162571-26162590 | None:intergenic | 40.0% | |
AGTACTAGCTCAACAAGCAA+CGG | - | chr8.3:26161892-26161911 | MS.gene87410:intron | 40.0% | |
AGTGACCTAATTAGGTCCAT+GGG | - | chr8.3:26162009-26162028 | MS.gene87410:CDS | 40.0% | |
ATCTTGTTGACCAGATGAAG+TGG | + | chr8.3:26162283-26162302 | None:intergenic | 40.0% | |
CAGACAACTCTTGATTTCCT+AGG | - | chr8.3:26162444-26162463 | MS.gene87410:intron | 40.0% | |
CTAATTAGGTCACTGAATGC+CGG | + | chr8.3:26162003-26162022 | None:intergenic | 40.0% | |
CTCTTGATTTCCTAGGATTG+GGG | - | chr8.3:26162451-26162470 | MS.gene87410:intron | 40.0% | |
GAAACTAAACTAGAACCCTC+TGG | + | chr8.3:26162336-26162355 | None:intergenic | 40.0% | |
GAAGAGGACATAATCTACCA+TGG | - | chr8.3:26160599-26160618 | MS.gene87410:CDS | 40.0% | |
GAGTTCTCTGGCAAAGATAT+TGG | - | chr8.3:26162582-26162601 | MS.gene87410:CDS | 40.0% | |
GATCTTTGTCTCAGTTTCCA+TGG | + | chr8.3:26160619-26160638 | None:intergenic | 40.0% | |
GCACTTATCACATCAATTGG+CGG | - | chr8.3:26162510-26162529 | MS.gene87410:CDS | 40.0% | |
GGATCATGATGAACACAAGT+TGG | + | chr8.3:26160682-26160701 | None:intergenic | 40.0% | |
TACATCCCATGGACCTAATT+AGG | + | chr8.3:26162017-26162036 | None:intergenic | 40.0% | |
TCAACAAGATAGCCTGCATT+GGG | - | chr8.3:26162293-26162312 | MS.gene87410:CDS | 40.0% | |
TGCTTAGGACCAAACATTGA+GGG | + | chr8.3:26162426-26162445 | None:intergenic | 40.0% | |
TGTGGTTCCTCTATGATTTG+TGG | + | chr8.3:26161823-26161842 | None:intergenic | 40.0% | |
! | AGTTTAGTTTCAGCAGGACT+TGG | - | chr8.3:26162345-26162364 | MS.gene87410:CDS | 40.0% |
! | ATCAAGTGATCTGAGATTCG+GGG | - | chr8.3:26161440-26161459 | MS.gene87410:intron | 40.0% |
! | ATGATCCATGATTAGTCGAG+AGG | + | chr8.3:26162098-26162117 | None:intergenic | 40.0% |
! | GATCAAGTGATCTGAGATTC+GGG | - | chr8.3:26161439-26161458 | MS.gene87410:intron | 40.0% |
! | GGATCAAGTGATCTGAGATT+CGG | - | chr8.3:26161438-26161457 | MS.gene87410:intron | 40.0% |
! | TAATTTGTACCTGGCATTCC+TGG | + | chr8.3:26160388-26160407 | None:intergenic | 40.0% |
!! | CATGATCCTTCTAGAGCTTT+AGG | - | chr8.3:26160694-26160713 | MS.gene87410:CDS | 40.0% |
!! | GGTTCTAGTTTAGTTTCAGC+AGG | - | chr8.3:26162339-26162358 | MS.gene87410:CDS | 40.0% |
!! | TGATGAACACAAGTTGGTTC+AGG | + | chr8.3:26160676-26160695 | None:intergenic | 40.0% |
!! | TTTGGTAATGGAGAGTTCTC+TGG | - | chr8.3:26162570-26162589 | MS.gene87410:CDS | 40.0% |
!! | TTTTGAAGATCCAGAAGCAG+AGG | - | chr8.3:26160477-26160496 | MS.gene87410:CDS | 40.0% |
!!! | ATTGTGGAACCGTTTTTTCC+AGG | - | chr8.3:26160860-26160879 | MS.gene87410:CDS | 40.0% |
!!! | TTCTTGGTGGGTTTTGGAAT+TGG | + | chr8.3:26160352-26160371 | None:intergenic | 40.0% |
CAACAAGATAGCCTGCATTG+GGG | - | chr8.3:26162294-26162313 | MS.gene87410:CDS | 45.0% | |
CAGTGACCTAATTAGGTCCA+TGG | - | chr8.3:26162008-26162027 | MS.gene87410:CDS | 45.0% | |
CGGCATTCAGTGACCTAATT+AGG | - | chr8.3:26162001-26162020 | MS.gene87410:intron | 45.0% | |
CTCTCCATTACCAAAGGATG+CGG | + | chr8.3:26162565-26162584 | None:intergenic | 45.0% | |
CTGCTTAGGACCAAACATTG+AGG | + | chr8.3:26162427-26162446 | None:intergenic | 45.0% | |
CTTATCACATCAATTGGCGG+TGG | - | chr8.3:26162513-26162532 | MS.gene87410:CDS | 45.0% | |
CTTTGCCTCTCGACTAATCA+TGG | - | chr8.3:26162090-26162109 | MS.gene87410:CDS | 45.0% | |
GAAATCTGTAGGACGAGGAT+CGG | + | chr8.3:26162040-26162059 | None:intergenic | 45.0% | |
GAAGCTAGCATCTCTTCATC+TGG | - | chr8.3:26160307-26160326 | MS.gene87410:CDS | 45.0% | |
GACAATGTTTCCACAGCTTC+AGG | - | chr8.3:26160283-26160302 | MS.gene87410:CDS | 45.0% | |
GACACACCACTATTTGACTG+AGG | + | chr8.3:26161180-26161199 | None:intergenic | 45.0% | |
GCAGTAGTAGTAATCACTGC+CGG | + | chr8.3:26161144-26161163 | None:intergenic | 45.0% | |
GTCAACAAGATAGCCTGCAT+TGG | - | chr8.3:26162292-26162311 | MS.gene87410:CDS | 45.0% | |
TAATGCAGTGGCAGACATTG+CGG | + | chr8.3:26162178-26162197 | None:intergenic | 45.0% | |
TCTTCTGCTTCCACTTCATC+TGG | - | chr8.3:26162270-26162289 | MS.gene87410:CDS | 45.0% | |
TGATTTCCTAGGATTGGGGA+TGG | - | chr8.3:26162455-26162474 | MS.gene87410:intron | 45.0% | |
! | CAGAGCTTTTTGTGATGCGT+TGG | - | chr8.3:26161020-26161039 | MS.gene87410:CDS | 45.0% |
! | GGTTCCTCTATGATTTGTGG+TGG | + | chr8.3:26161820-26161839 | None:intergenic | 45.0% |
!! | TTTTTGTGATGCGTTGGCAG+AGG | - | chr8.3:26161026-26161045 | MS.gene87410:CDS | 45.0% |
AATGCAGTGGCAGACATTGC+GGG | + | chr8.3:26162177-26162196 | None:intergenic | 50.0% | |
AGAAATCTCCCAGGAATGCC+AGG | - | chr8.3:26160376-26160395 | MS.gene87410:CDS | 50.0% | |
AGAGCAATCACCTCTGCTTC+TGG | + | chr8.3:26160490-26160509 | None:intergenic | 50.0% | |
CTCGGACAAATGGAACCAGA+GGG | - | chr8.3:26162318-26162337 | MS.gene87410:CDS | 50.0% | |
CTTCTGAGTCTCCAAAGCAG+AGG | + | chr8.3:26161202-26161221 | None:intergenic | 50.0% | |
GCTGAGAAATCTGTAGGACG+AGG | + | chr8.3:26162045-26162064 | None:intergenic | 50.0% | |
GGACTAGGTCTTCCTTGTGA+CGG | - | chr8.3:26162366-26162385 | MS.gene87410:CDS | 50.0% | |
GGAGGAGCTGAGAAATCTGT+AGG | + | chr8.3:26162051-26162070 | None:intergenic | 50.0% | |
GTTTCAGCAGGACTTGGACT+AGG | - | chr8.3:26162351-26162370 | MS.gene87410:CDS | 50.0% | |
TAGTGGTGTGTCCTCTGCTT+TGG | - | chr8.3:26161188-26161207 | MS.gene87410:intron | 50.0% | |
TCTCGGACAAATGGAACCAG+AGG | - | chr8.3:26162317-26162336 | MS.gene87410:CDS | 50.0% | |
TGACGGCGATTCTGGACTAA+AGG | - | chr8.3:26162383-26162402 | MS.gene87410:CDS | 50.0% | |
TTGGGGACTCCCTCAATGTT+TGG | - | chr8.3:26162414-26162433 | MS.gene87410:intron | 50.0% | |
TTTGACCGGTGATTCGAAGC+CGG | - | chr8.3:26161110-26161129 | MS.gene87410:intron | 50.0% | |
! | GCTGATGTGTTGGCACGTAT+TGG | + | chr8.3:26162152-26162171 | None:intergenic | 50.0% |
!! | GCTTTGGAGACTCAGAAGCT+AGG | - | chr8.3:26161204-26161223 | MS.gene87410:intron | 50.0% |
!!! | CATCGATTTTCGGAGCAGGA+GGG | - | chr8.3:26162115-26162134 | MS.gene87410:CDS | 50.0% |
!!! | GGATCATCGATTTTCGGAGC+AGG | - | chr8.3:26162111-26162130 | MS.gene87410:CDS | 50.0% |
!!! | TCATCGATTTTCGGAGCAGG+AGG | - | chr8.3:26162114-26162133 | MS.gene87410:CDS | 50.0% |
AAGTGCAGACAAGCCTCCAC+CGG | + | chr8.3:26162496-26162515 | None:intergenic | 55.0% | |
AATTGGCGGTGGCAGTGGTT+TGG | - | chr8.3:26162524-26162543 | MS.gene87410:CDS | 55.0% | |
ACAAACGCCTCTCTGCTTCG+CGG | - | chr8.3:26162231-26162250 | MS.gene87410:CDS | 55.0% | |
ACATCAATTGGCGGTGGCAG+TGG | - | chr8.3:26162519-26162538 | MS.gene87410:CDS | 55.0% | |
ACGAGGATCGGTACATCCCA+TGG | + | chr8.3:26162028-26162047 | None:intergenic | 55.0% | |
AGTCCAGAATCGCCGTCACA+AGG | + | chr8.3:26162381-26162400 | None:intergenic | 55.0% | |
CTTCCTTGTGACGGCGATTC+TGG | - | chr8.3:26162375-26162394 | MS.gene87410:CDS | 55.0% | |
GAGGCAAAGAGAGATCGCCT+CGG | + | chr8.3:26162079-26162098 | None:intergenic | 55.0% | |
GATAGCCTGCATTGGGGTCT+CGG | - | chr8.3:26162300-26162319 | MS.gene87410:CDS | 55.0% | |
GCAGCCGCATCCTTTGGTAA+TGG | - | chr8.3:26162558-26162577 | MS.gene87410:CDS | 55.0% | |
GCATTGGGGTCTCGGACAAA+TGG | - | chr8.3:26162308-26162327 | MS.gene87410:CDS | 55.0% | |
TTCTGCGAGTCTCCAACCTC+AGG | - | chr8.3:26161975-26161994 | MS.gene87410:intron | 55.0% | |
TTTGTCCGAGACCCCAATGC+AGG | + | chr8.3:26162308-26162327 | None:intergenic | 55.0% | |
! | GCTAGCTTCACCTGAAGCTG+TGG | + | chr8.3:26160296-26160315 | None:intergenic | 55.0% |
ACCAAAGGATGCGGCTGCTG+CGG | + | chr8.3:26162556-26162575 | None:intergenic | 60.0% | |
AGAGAGATCGCCTCGGACGA+TGG | + | chr8.3:26162072-26162091 | None:intergenic | 60.0% | |
ATTGCGGGCGGCTGATGTGT+TGG | + | chr8.3:26162162-26162181 | None:intergenic | 60.0% | |
CAAACGCCTCTCTGCTTCGC+GGG | - | chr8.3:26162232-26162251 | MS.gene87410:CDS | 60.0% | |
CAGCAGCCATCCCCAATCCT+AGG | + | chr8.3:26162464-26162483 | None:intergenic | 60.0% | |
CTAGGATTGGGGATGGCTGC+TGG | - | chr8.3:26162462-26162481 | MS.gene87410:intron | 60.0% | |
GAGTCTCCAACCTCAGGCAC+CGG | - | chr8.3:26161981-26162000 | MS.gene87410:intron | 60.0% | |
TCACTGAATGCCGGTGCCTG+AGG | + | chr8.3:26161994-26162013 | None:intergenic | 60.0% | |
TGAATGCCGGTGCCTGAGGT+TGG | + | chr8.3:26161990-26162009 | None:intergenic | 60.0% | |
! | ATGGCTGCTGGTGGTAGTGC+CGG | - | chr8.3:26162474-26162493 | MS.gene87410:intron | 60.0% |
! | GATTTTCGGAGCAGGAGGGC+AGG | - | chr8.3:26162119-26162138 | MS.gene87410:CDS | 60.0% |
! | GGCTGTGCTACTACCAGCAC+TGG | - | chr8.3:26161913-26161932 | MS.gene87410:intron | 60.0% |
!! | ATCACTGCCGGCATCGACAC+CGG | + | chr8.3:26161132-26161151 | None:intergenic | 60.0% |
!! | CGACACCGGCTTCGAATCAC+CGG | + | chr8.3:26161118-26161137 | None:intergenic | 60.0% |
!! | TTCGAAGCCGGTGTCGATGC+CGG | - | chr8.3:26161122-26161141 | MS.gene87410:intron | 60.0% |
ACCGCAGCAGCCGCATCCTT+TGG | - | chr8.3:26162552-26162571 | MS.gene87410:CDS | 65.0% | |
CTCAGCTCCTCCATCGTCCG+AGG | - | chr8.3:26162059-26162078 | MS.gene87410:CDS | 65.0% | |
GAGATCGCCTCGGACGATGG+AGG | + | chr8.3:26162069-26162088 | None:intergenic | 65.0% | |
GCAGTGGCAGACATTGCGGG+CGG | + | chr8.3:26162174-26162193 | None:intergenic | 65.0% | |
GCTCGCAAACACGCCAGTGC+TGG | + | chr8.3:26161929-26161948 | None:intergenic | 65.0% | |
GGATTGGGGATGGCTGCTGG+TGG | - | chr8.3:26162465-26162484 | MS.gene87410:intron | 65.0% | |
TCCAAGCCCGCGAAGCAGAG+AGG | + | chr8.3:26162241-26162260 | None:intergenic | 65.0% | |
GCCTCTCTGCTTCGCGGGCT+TGG | - | chr8.3:26162237-26162256 | MS.gene87410:CDS | 70.0% | |
! | GCTGCTGGTGGTAGTGCCGG+TGG | - | chr8.3:26162477-26162496 | MS.gene87410:intron | 70.0% |
!! | GCTGGTGGTAGTGCCGGTGG+AGG | - | chr8.3:26162480-26162499 | MS.gene87410:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 26160271 | 26162617 | 26160271 | ID=MS.gene87410 |
chr8.3 | mRNA | 26160271 | 26162617 | 26160271 | ID=MS.gene87410.t1;Parent=MS.gene87410 |
chr8.3 | exon | 26162491 | 26162617 | 26162491 | ID=MS.gene87410.t1.exon1;Parent=MS.gene87410.t1 |
chr8.3 | CDS | 26162491 | 26162617 | 26162491 | ID=cds.MS.gene87410.t1;Parent=MS.gene87410.t1 |
chr8.3 | exon | 26162007 | 26162403 | 26162007 | ID=MS.gene87410.t1.exon2;Parent=MS.gene87410.t1 |
chr8.3 | CDS | 26162007 | 26162403 | 26162007 | ID=cds.MS.gene87410.t1;Parent=MS.gene87410.t1 |
chr8.3 | exon | 26161663 | 26161889 | 26161663 | ID=MS.gene87410.t1.exon3;Parent=MS.gene87410.t1 |
chr8.3 | CDS | 26161663 | 26161889 | 26161663 | ID=cds.MS.gene87410.t1;Parent=MS.gene87410.t1 |
chr8.3 | exon | 26160271 | 26161085 | 26160271 | ID=MS.gene87410.t1.exon4;Parent=MS.gene87410.t1 |
chr8.3 | CDS | 26160271 | 26161085 | 26160271 | ID=cds.MS.gene87410.t1;Parent=MS.gene87410.t1 |
Gene Sequence |
Protein sequence |