AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene87427

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87427.t1 MTR_2g092930 85.106 188 23 2 52 234 57 244 1.29e-93 310
MS.gene87427.t1 MTR_4g079860 86.420 162 22 0 52 213 57 218 2.48e-85 288
MS.gene87427.t1 MTR_8g463920 83.333 162 26 1 52 213 57 217 3.08e-79 269
MS.gene87427.t1 MTR_8g463920 83.333 162 26 1 52 213 57 217 1.09e-78 270
MS.gene87427.t1 MTR_2g076670 77.778 162 35 1 52 213 56 216 5.98e-73 253
MS.gene87427.t1 MTR_4g086835 83.871 124 8 1 281 392 254 377 1.67e-63 216
MS.gene87427.t1 MTR_4g086835 83.065 124 8 2 281 392 254 376 3.50e-61 210
MS.gene87427.t1 MTR_5g029260 82.014 139 13 2 518 644 69 207 2.16e-58 199
MS.gene87427.t1 MTR_5g017980 62.500 104 35 2 287 389 191 291 4.47e-33 130
MS.gene87427.t1 MTR_4g113140 64.356 101 31 2 285 381 231 330 1.71e-32 130
MS.gene87427.t1 MTR_5g017980 61.538 104 35 3 287 389 190 289 7.29e-31 124
MS.gene87427.t1 MTR_5g017980 61.538 104 35 3 287 389 191 290 7.51e-31 123
MS.gene87427.t1 MTR_3g105660 40.881 159 80 2 499 644 37 194 1.98e-28 115
MS.gene87427.t1 MTR_5g054300 60.920 87 30 1 289 371 198 284 8.10e-28 115
MS.gene87427.t1 MTR_1g093080 61.798 89 28 1 289 371 211 299 2.00e-27 115
MS.gene87427.t1 MTR_6g466340 90.909 55 5 0 551 605 1 55 1.57e-20 89.0
MS.gene87427.t1 MTR_7g405800 84.906 53 7 1 552 603 67 119 4.82e-20 90.1
MS.gene87427.t1 MTR_6g464960 90.909 55 5 0 551 605 1 55 7.45e-20 89.0
MS.gene87427.t1 MTR_1g093080 78.431 51 11 0 289 339 211 261 1.01e-19 90.5
MS.gene87427.t1 MTR_6g005650 93.333 45 3 0 559 603 142 186 3.32e-19 89.0
MS.gene87427.t1 MTR_6g005650 64.384 73 17 2 248 314 70 139 2.58e-11 65.5
MS.gene87427.t1 MTR_6g009130 61.667 60 18 1 536 595 109 163 1.39e-13 70.1
MS.gene87427.t1 MTR_1g053830 52.830 53 25 0 291 343 20 72 7.10e-13 65.5
MS.gene87427.t1 MTR_7g098250 47.059 85 34 2 269 353 253 326 5.68e-12 68.9
MS.gene87427.t1 MTR_7g115530 61.111 54 21 0 289 342 218 271 6.51e-12 67.4
MS.gene87427.t1 MTR_1g080330 54.688 64 28 1 289 352 175 237 7.60e-12 67.0
MS.gene87427.t1 MTR_5g041350 41.975 81 46 1 289 368 15 95 7.77e-12 67.8
MS.gene87427.t1 MTR_7g069660 42.683 82 40 2 267 342 44 124 9.24e-12 67.4
MS.gene87427.t1 MTR_1g080330 54.688 64 28 1 289 352 175 237 9.39e-12 67.8
MS.gene87427.t1 MTR_7g115530 61.111 54 21 0 289 342 218 271 1.05e-11 67.0
MS.gene87427.t1 MTR_7g115530 61.111 54 21 0 289 342 218 271 1.40e-11 67.0
MS.gene87427.t1 MTR_7g115530 61.111 54 21 0 289 342 218 271 1.61e-11 67.4
MS.gene87427.t1 MTR_5g014040 41.053 95 54 2 255 348 276 369 1.88e-11 67.4
MS.gene87427.t1 MTR_7g089010 51.667 60 28 1 289 348 91 149 2.54e-11 65.5
MS.gene87427.t1 MTR_2g027860 58.182 55 23 0 289 343 49 103 2.67e-11 65.9
MS.gene87427.t1 MTR_7g088070 50.769 65 31 1 289 353 50 113 3.94e-11 64.7
MS.gene87427.t1 MTR_4g078810 46.667 75 35 2 294 364 163 236 4.57e-11 65.9
MS.gene87427.t1 MTR_2g023580 48.438 64 30 1 282 342 45 108 4.78e-11 63.9
MS.gene87427.t1 MTR_1g067150 66.000 50 12 1 392 436 62 111 4.84e-11 66.6
MS.gene87427.t1 MTR_7g088070 56.364 55 24 0 289 343 50 104 5.35e-11 64.3
MS.gene87427.t1 MTR_4g121020 53.125 64 29 1 289 352 215 277 5.46e-11 66.2
MS.gene87427.t1 MTR_4g121020 53.125 64 29 1 289 352 215 277 5.47e-11 66.2
MS.gene87427.t1 MTR_3g050860 70.588 51 12 1 433 480 187 237 5.76e-11 65.1
MS.gene87427.t1 MTR_2g450070 47.368 76 35 3 289 363 213 284 6.10e-11 65.9
MS.gene87427.t1 MTR_2g450070 47.368 76 35 3 289 363 213 284 6.58e-11 65.9
MS.gene87427.t1 MTR_5g027440 50.746 67 31 1 283 347 19 85 6.89e-11 63.9
MS.gene87427.t1 MTR_4g121020 53.125 64 29 1 289 352 111 173 7.17e-11 65.5
MS.gene87427.t1 MTR_1g013170 50.794 63 30 1 289 351 191 252 8.25e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87427.t1 AT1G53310 79.012 162 34 0 52 213 57 218 3.65e-75 259
MS.gene87427.t1 AT1G53310 79.012 162 34 0 52 213 57 218 3.65e-75 259
MS.gene87427.t1 AT1G53310 79.012 162 34 0 52 213 57 218 3.65e-75 259
MS.gene87427.t1 AT3G14940 77.778 162 36 0 52 213 57 218 1.07e-73 256
MS.gene87427.t1 AT3G14940 77.778 162 36 0 52 213 57 218 1.07e-73 256
MS.gene87427.t1 AT2G42600 77.778 162 35 1 52 213 57 217 2.24e-71 249
MS.gene87427.t1 AT2G42600 77.778 162 35 1 52 213 57 217 2.24e-71 249
MS.gene87427.t1 AT2G42600 77.778 162 35 1 52 213 57 217 2.24e-71 249
MS.gene87427.t1 AT1G32220 64.748 139 37 2 518 644 63 201 2.74e-54 187
MS.gene87427.t1 AT2G03500 54.264 129 43 3 283 396 227 354 1.19e-32 131
MS.gene87427.t1 AT1G68670 67.778 90 21 1 289 370 215 304 3.89e-32 128
MS.gene87427.t1 AT1G13300 68.182 88 23 2 289 371 181 268 5.01e-31 124
MS.gene87427.t1 AT1G49560 51.429 140 58 4 261 391 163 301 1.12e-30 123
MS.gene87427.t1 AT1G25550 55.556 108 36 3 289 388 209 312 1.91e-29 120
MS.gene87427.t1 AT3G25790 59.524 84 29 1 293 371 200 283 1.03e-26 112
MS.gene87427.t1 AT5G15910 40.940 149 74 3 508 643 32 179 3.42e-23 100
MS.gene87427.t1 AT4G37180 55.238 105 33 3 290 389 211 306 8.10e-23 100
MS.gene87427.t1 AT4G37180 54.717 106 34 3 289 389 217 313 8.77e-23 100
MS.gene87427.t1 AT5G10730 41.727 139 67 3 518 643 57 194 1.72e-22 98.6
MS.gene87427.t1 AT5G15910 42.754 138 65 3 519 643 2 138 3.38e-22 96.3
MS.gene87427.t1 AT1G25550 82.353 51 9 0 289 339 209 259 1.42e-21 95.5
MS.gene87427.t1 AT1G49560 58.750 80 32 1 261 339 163 242 4.87e-21 93.6
MS.gene87427.t1 AT4G37180 74.510 51 13 0 289 339 210 260 2.28e-17 83.2
MS.gene87427.t1 AT3G25790 74.468 47 12 0 293 339 200 246 3.57e-17 82.4
MS.gene87427.t1 AT3G13040 54.412 68 31 0 276 343 228 295 4.56e-13 72.4
MS.gene87427.t1 AT3G13040 54.412 68 31 0 276 343 228 295 4.56e-13 72.4
MS.gene87427.t1 AT3G13040 54.412 68 31 0 276 343 228 295 4.56e-13 72.4
MS.gene87427.t1 AT5G59570 38.614 101 48 2 287 387 139 225 4.89e-12 67.8
MS.gene87427.t1 AT5G59570 38.614 101 48 2 287 387 139 225 4.89e-12 67.8
MS.gene87427.t1 AT3G04450 53.226 62 29 0 281 342 230 291 7.86e-12 67.4
MS.gene87427.t1 AT2G40970 41.860 86 46 2 263 348 82 163 1.11e-11 65.9
MS.gene87427.t1 AT2G01060 53.226 62 29 0 282 343 8 69 1.19e-11 66.2
MS.gene87427.t1 AT3G04450 53.226 62 29 0 281 342 230 291 1.71e-11 67.4
MS.gene87427.t1 AT4G28610 45.122 82 44 1 274 354 210 291 1.75e-11 67.0
MS.gene87427.t1 AT3G10760 51.667 60 28 1 289 348 105 163 1.80e-11 66.6
MS.gene87427.t1 AT2G06020 48.571 70 34 1 289 358 86 153 1.81e-11 66.2
MS.gene87427.t1 AT3G04450 53.226 62 29 0 281 342 190 251 1.93e-11 67.0
MS.gene87427.t1 AT3G04450 53.226 62 29 0 281 342 190 251 1.93e-11 67.0
MS.gene87427.t1 AT5G05090 51.667 60 28 1 289 348 81 139 2.06e-11 65.5
MS.gene87427.t1 AT2G38300 44.737 76 38 2 271 342 32 107 4.05e-11 65.5
MS.gene87427.t1 AT5G29000 48.718 78 29 1 265 342 218 284 4.28e-11 65.1
MS.gene87427.t1 AT3G12730 44.595 74 33 1 270 343 12 77 7.88e-11 63.2
MS.gene87427.t1 AT5G29000 48.718 78 29 1 265 342 175 241 8.17e-11 64.7
MS.gene87427.t1 AT5G29000 48.718 78 29 1 265 342 175 241 8.17e-11 64.7
MS.gene87427.t1 AT2G20400 51.562 64 30 1 289 352 231 293 8.73e-11 64.7
MS.gene87427.t1 AT2G20400 51.562 64 30 1 289 352 231 293 9.01e-11 64.7
MS.gene87427.t1 AT5G29000 48.718 78 29 1 265 342 218 284 9.82e-11 64.7

Find 122 sgRNAs with CRISPR-Local

Find 396 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTGAGATCAATATGAATT+TGG 0.138307 8.3:+26399545 None:intergenic
ATATGTAGATGCTAACTTTA+AGG 0.155460 8.3:-26401525 MS.gene87427:CDS
TTCTGAAACAATAGGGAATT+TGG 0.170765 8.3:+26399443 None:intergenic
TTGTAGTTCTTGGAGGTTTA+TGG 0.186325 8.3:-26401968 MS.gene87427:CDS
CATCATTTCAAGCTGGTAAT+TGG 0.226228 8.3:+26404486 None:intergenic
GAAGAATCAAATTGTTGATT+TGG 0.249808 8.3:-26405317 MS.gene87427:CDS
GTCTCAACCCTTGGAGGTTT+TGG 0.263647 8.3:-26400206 MS.gene87427:CDS
TTCTACAATGGCAAGGTATT+GGG 0.303344 8.3:-26401569 MS.gene87427:CDS
TCTTCGTCAGCTTTCTTTGC+CGG 0.327011 8.3:+26401293 None:intergenic
GATCAGTCTGTTGTAGTTCT+TGG 0.328036 8.3:-26401978 MS.gene87427:CDS
TTTGTTTATTGCAGCAGTTT+TGG 0.332271 8.3:-26403808 MS.gene87427:intron
TTTCTACAATGGCAAGGTAT+TGG 0.336275 8.3:-26401570 MS.gene87427:CDS
ATCAGTTCTCTAATTTGCTT+TGG 0.337934 8.3:+26402402 None:intergenic
ACAAATCTCCAGTGCAATTC+CGG 0.347696 8.3:+26403047 None:intergenic
ATGATTGTAAAGGATTCAAT+TGG 0.349804 8.3:-26406252 MS.gene87427:CDS
TATGTAGATGCTAACTTTAA+GGG 0.368610 8.3:-26401524 MS.gene87427:CDS
GATCGAGTAGCAGTTCTAAC+AGG 0.374242 8.3:-26403169 MS.gene87427:CDS
TCACTTGAAGCTTTCTTTGT+GGG 0.376593 8.3:+26400852 None:intergenic
GCACTATCAACTTTCTTTGC+GGG 0.384544 8.3:+26401079 None:intergenic
TTGGGAGGCAATGGGTTTGT+TGG 0.385926 8.3:-26400464 MS.gene87427:CDS
CACTCAGATTCTGAAACAAT+AGG 0.387450 8.3:+26399435 None:intergenic
TGATATGTAGATTGTAGTCT+TGG 0.387607 8.3:-26400483 MS.gene87427:intron
ACTGAGATCAATATGAATTT+GGG 0.389375 8.3:+26399546 None:intergenic
TGAGGGAAGGATTTGGTTTG+AGG 0.392153 8.3:-26403193 MS.gene87427:intron
TTCAATATCTGACTCAGTTA+TGG 0.393256 8.3:+26405402 None:intergenic
GGAGTAAACTCTTCCAAAAC+TGG 0.401354 8.3:+26403742 None:intergenic
AAGACTCCTCTGGAAGTCTT+TGG 0.405200 8.3:-26405346 MS.gene87427:CDS
GGAGGCGTATGAGCGTTTAA+AGG 0.407171 8.3:-26406277 MS.gene87427:CDS
AAGCATGTGAGAAAATGATT+TGG 0.410145 8.3:+26405516 None:intergenic
AACTGGGACAAAGTACTTCC+TGG 0.412405 8.3:-26400242 MS.gene87427:CDS
TCAAGTTCTTGCTTATCATC+TGG 0.412579 8.3:+26404761 None:intergenic
TTCAAATTGCATATAGAAGA+AGG 0.414598 8.3:-26405468 MS.gene87427:CDS
GTAAATGCTGCAAACGAATA+TGG 0.416823 8.3:-26400134 MS.gene87427:intron
ATTGAGCCTTTCTGTGCTAA+AGG 0.418233 8.3:-26405930 MS.gene87427:intron
GCTTCTGACTTCTATGCCCT+TGG 0.421294 8.3:+26400415 None:intergenic
CTTTCATCGGGGTACTTCAC+AGG 0.421460 8.3:-26399495 MS.gene87427:CDS
AGAAGTCGTACTTCTACCTT+TGG 0.421534 8.3:+26401917 None:intergenic
CAGTCTGTTGTAGTTCTTGG+AGG 0.429416 8.3:-26401975 MS.gene87427:CDS
TTCACTTGAAGCTTTCTTTG+TGG 0.433531 8.3:+26400851 None:intergenic
TTTGAACCGTGGAAAACTCT+TGG 0.435487 8.3:-26406187 MS.gene87427:CDS
TCTTCACTTCATCATTAGTC+AGG 0.447623 8.3:+26402367 None:intergenic
ATTGTAGTCTTGGGAGGCAA+TGG 0.455853 8.3:-26400473 MS.gene87427:CDS
GTTAATGCGTTGCAGAAGCT+TGG 0.458197 8.3:-26403026 MS.gene87427:CDS
CATTAACCACATTTCTTCAA+AGG 0.464053 8.3:+26403721 None:intergenic
AGGATTAAGTTACTGAAGAA+AGG 0.470355 8.3:-26405448 MS.gene87427:CDS
GATGGAACAACTTTAGCTGC+AGG 0.471970 8.3:+26401332 None:intergenic
TTACTTACATTGGGAAACAT+AGG 0.475384 8.3:+26401497 None:intergenic
ACTCAGATTCTGAAACAATA+GGG 0.475824 8.3:+26399436 None:intergenic
ATGTTGACTGGTCTTGATGC+TGG 0.481421 8.3:-26405556 MS.gene87427:CDS
AAGGATTCAATTGGGTCTCT+AGG 0.484738 8.3:-26406243 MS.gene87427:CDS
TTAACTCACTTCATCTTCAT+CGG 0.487222 8.3:+26400815 None:intergenic
CGCATACTCGGCTGCATGGT+AGG 0.491371 8.3:+26403125 None:intergenic
GAGACTACTGCAGTAGCTCC+AGG 0.492058 8.3:+26400224 None:intergenic
TGATCAGTTCCACTTGCAGC+TGG 0.493532 8.3:+26401996 None:intergenic
AGCTATCAGCAGAGTATGAA+GGG 0.496822 8.3:-26405615 MS.gene87427:CDS
TTTAAAGGAGATGATTGTAA+AGG 0.497565 8.3:-26406262 MS.gene87427:CDS
AGCACTATCAACTTTCTTTG+CGG 0.497810 8.3:+26401078 None:intergenic
CTTTGCTGCAAAAGCATGGA+AGG 0.500526 8.3:-26405258 MS.gene87427:intron
ACTGAGTAGGATGAGCAGTT+AGG 0.501621 8.3:+26405293 None:intergenic
CAGTGTTATGCCTAATGTGC+AGG 0.501868 8.3:-26400282 MS.gene87427:CDS
CAGGAAATTTGAACTTATGC+CGG 0.502905 8.3:-26401597 MS.gene87427:CDS
CAGAGTATGAAGGGGAGCAT+AGG 0.503409 8.3:-26405606 MS.gene87427:CDS
GATATGTAGATTGTAGTCTT+GGG 0.505411 8.3:-26400482 MS.gene87427:intron
TTGTAGTCTTGGGAGGCAAT+GGG 0.505552 8.3:-26400472 MS.gene87427:CDS
GCAGTAGTCTCAACCCTTGG+AGG 0.506289 8.3:-26400212 MS.gene87427:CDS
GCTGGTCACCGGAATTGCAC+TGG 0.514373 8.3:-26403055 MS.gene87427:CDS
ACGAGAGGATATTACTATTG+AGG 0.515167 8.3:-26406164 MS.gene87427:intron
GAGGGAAGGATTTGGTTTGA+GGG 0.518399 8.3:-26403192 MS.gene87427:intron
CAGAAGCTTGGAGGTTCTCA+AGG 0.522479 8.3:-26403014 MS.gene87427:intron
CTAGGAAACAGAGGAGATGC+TGG 0.524226 8.3:-26403073 MS.gene87427:intron
TGTTGGTTCTGCTATTTGCA+AGG 0.529685 8.3:-26400447 MS.gene87427:CDS
TCGGAAGAAAATAAGAAACT+TGG 0.529932 8.3:-26406216 MS.gene87427:CDS
GAGTCATTGTATTGTTCTTG+AGG 0.529959 8.3:+26401942 None:intergenic
TAAACTCAAGAAGACTCCTC+TGG 0.531341 8.3:-26405356 MS.gene87427:CDS
AATTGGGTCTCTAGGAATCT+CGG 0.539258 8.3:-26406235 MS.gene87427:CDS
ATCTTCTGATGAAGAAGATA+AGG 0.540588 8.3:-26401027 MS.gene87427:intron
GAGCTATCAGCAGAGTATGA+AGG 0.540932 8.3:-26405616 MS.gene87427:CDS
TTTACTCCTTTGAAGAAATG+TGG 0.541375 8.3:-26403727 MS.gene87427:intron
GAACTCTCCGCGTGTGAAGT+CGG 0.543186 8.3:+26402018 None:intergenic
TTGCAAGGCAGCAGTATCCA+AGG 0.543594 8.3:-26400432 MS.gene87427:CDS
GAGCAAATGAGTAAGATTAA+CGG 0.546831 8.3:-26400176 MS.gene87427:CDS
ACTGCAGTAGTCTCAACCCT+TGG 0.549155 8.3:-26400215 MS.gene87427:CDS
TGATTGTAAAGGATTCAATT+GGG 0.552400 8.3:-26406251 MS.gene87427:CDS
CCTCGCTACCAAAACCTCCA+AGG 0.554056 8.3:+26400198 None:intergenic
AATGCGTTGCAGAAGCTTGG+AGG 0.554542 8.3:-26403023 MS.gene87427:CDS
CGATCTTTGCTGCAAAAGCA+TGG 0.556290 8.3:-26405262 MS.gene87427:CDS
AGGGAAGGATTTGGTTTGAG+GGG 0.559527 8.3:-26403191 MS.gene87427:intron
ACAGAGGAGATGCTGGTCAC+CGG 0.560535 8.3:-26403066 MS.gene87427:CDS
ATAAAACCTTTAGCACAGAA+AGG 0.563740 8.3:+26405924 None:intergenic
TGATTTACAGCTAAATGAAG+TGG 0.565204 8.3:+26401879 None:intergenic
CTCGGCTGCATGGTAGGAGG+AGG 0.566371 8.3:+26403131 None:intergenic
GACGAGGAAATTGAAGCTGA+TGG 0.566448 8.3:-26404511 MS.gene87427:CDS
ATGCCGGAAAATTTCTACAA+TGG 0.578125 8.3:-26401581 MS.gene87427:CDS
AGTGGCGCAGGACGCATACT+CGG 0.578170 8.3:+26403113 None:intergenic
AAGATTCATTAGAGTCTCAT+CGG 0.583376 8.3:+26401045 None:intergenic
TGATGAGGCTTTACAAAGAG+AGG 0.584519 8.3:-26404741 MS.gene87427:intron
AGAACCTCATCATTTCAAGC+TGG 0.586396 8.3:+26404479 None:intergenic
AGGACGCATACTCGGCTGCA+TGG 0.587405 8.3:+26403121 None:intergenic
CTCGCTACCAAAACCTCCAA+GGG 0.588850 8.3:+26400199 None:intergenic
GAACTTGGGAATATGTTGAC+TGG 0.591152 8.3:-26405568 MS.gene87427:CDS
AGTTCTTGCTTATCATCTGG+TGG 0.592445 8.3:+26404764 None:intergenic
CGGAGAGTTCCAGCTGCAAG+TGG 0.596945 8.3:-26402005 MS.gene87427:CDS
GGAAAATTTCTACAATGGCA+AGG 0.602439 8.3:-26401576 MS.gene87427:CDS
GATCGACGAATCGACTGAGT+AGG 0.604180 8.3:+26405280 None:intergenic
ATTACCAGCTTGAAATGATG+AGG 0.605403 8.3:-26404483 MS.gene87427:intron
TAACGGCGAGGCTAATGTTG+TGG 0.613394 8.3:-26400159 MS.gene87427:CDS
ATGTAGATTGTAGTCTTGGG+AGG 0.624281 8.3:-26400479 MS.gene87427:intron
ATACTCGGCTGCATGGTAGG+AGG 0.637947 8.3:+26403128 None:intergenic
CAATACAATGACTCTTCCAA+AGG 0.638042 8.3:-26401933 MS.gene87427:CDS
TGATAAGCAAGAACTTGATG+AGG 0.638900 8.3:-26404756 MS.gene87427:CDS
ATCGAGTAGCAGTTCTAACA+GGG 0.639723 8.3:-26403168 MS.gene87427:CDS
GTGGAAAACTCTTGGACGAG+AGG 0.645079 8.3:-26406179 MS.gene87427:CDS
CTTGGCCTAACTTTGAACCG+TGG 0.648010 8.3:-26406198 MS.gene87427:CDS
GCTAAATGAAGTGGACTCTG+TGG 0.648643 8.3:+26401888 None:intergenic
AGTAGACTTCTAGGAAACAG+AGG 0.648712 8.3:-26403082 MS.gene87427:intron
TGCAAGGCAGCAGTATCCAA+GGG 0.650092 8.3:-26400431 MS.gene87427:CDS
GCAGATGAGGGAAGAAGACG+AGG 0.653304 8.3:-26404527 MS.gene87427:intron
AAAGCACCAAAGACTTCCAG+AGG 0.665836 8.3:+26405340 None:intergenic
AGAAATACCGACTTCACACG+CGG 0.668200 8.3:-26402025 MS.gene87427:CDS
GCTATCAGCAGAGTATGAAG+GGG 0.686527 8.3:-26405614 MS.gene87427:CDS
TGTTGATTCTGATGAAGATG+AGG 0.690996 8.3:-26401264 MS.gene87427:intron
AATGAGTAAGATTAACGGCG+AGG 0.692445 8.3:-26400171 MS.gene87427:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAAATTTTTTTTTTTTA+TGG - chr8.3:26404564-26404583 MS.gene87427:intron 0.0%
!! AAAGTTATTAACAAATATAA+TGG + chr8.3:26400486-26400505 None:intergenic 10.0%
!! AAGGAAAAATATATATTTAA+TGG + chr8.3:26404798-26404817 None:intergenic 10.0%
!! AATACAATGATATAAAATTA+AGG + chr8.3:26404513-26404532 None:intergenic 10.0%
!! ATACAATGATATAAAATTAA+GGG + chr8.3:26404512-26404531 None:intergenic 10.0%
!! ATTATACATAATTTCAAAAT+TGG - chr8.3:26399725-26399744 MS.gene87427:intron 10.0%
!! CATATATTTAATATCTTATA+TGG - chr8.3:26402789-26402808 MS.gene87427:intron 10.0%
!!! ATTAAATATATATTTTTCCT+TGG - chr8.3:26404797-26404816 MS.gene87427:CDS 10.0%
!!! CTTTATTTTGTTTTTTAAAA+TGG - chr8.3:26404772-26404791 MS.gene87427:CDS 10.0%
!!! GATAATATAATTTTCAAAAT+TGG - chr8.3:26399990-26400009 MS.gene87427:intron 10.0%
!!! TTTTCAATAAAAATTTAAGT+GGG + chr8.3:26399929-26399948 None:intergenic 10.0%
!! AAACCTAAAAATGATTAATA+TGG + chr8.3:26402458-26402477 None:intergenic 15.0%
!! AATCTATAATATTTCCAAAT+TGG + chr8.3:26402849-26402868 None:intergenic 15.0%
!! TAATAAACAAAACAAAAAGT+TGG + chr8.3:26404316-26404335 None:intergenic 15.0%
!! TATATAGTGAATTAATTGAT+AGG - chr8.3:26405074-26405093 MS.gene87427:intron 15.0%
!! TTTAAATATTACTGTTCTTA+TGG + chr8.3:26404952-26404971 None:intergenic 15.0%
!! TTTCAATAAAAATTTAAGTG+GGG + chr8.3:26399928-26399947 None:intergenic 15.0%
!!! AATATTTTTTCATAAGCATA+AGG + chr8.3:26399870-26399889 None:intergenic 15.0%
!!! ATGTTTTAGCTATAAATTAA+AGG + chr8.3:26404286-26404305 None:intergenic 15.0%
!!! CTTTTCAATAAAAATTTAAG+TGG + chr8.3:26399930-26399949 None:intergenic 15.0%
!!! TTAATCATTTTTAGGTTTTT+TGG - chr8.3:26402460-26402479 MS.gene87427:intron 15.0%
!! AAAATATAATCTACCCAATT+AGG + chr8.3:26399599-26399618 None:intergenic 20.0%
!! AAATGACCTCATAATATATT+TGG + chr8.3:26402419-26402438 None:intergenic 20.0%
!! AATATAGAAGAAAATTAAGG+TGG - chr8.3:26402175-26402194 MS.gene87427:intron 20.0%
!! ACAAAAATGTAAAGAAACAT+TGG + chr8.3:26405969-26405988 None:intergenic 20.0%
!! AGAATAAAAGGATAATGAAT+TGG - chr8.3:26403858-26403877 MS.gene87427:intron 20.0%
!! ATGTAATCAAATCATATGAA+AGG + chr8.3:26404925-26404944 None:intergenic 20.0%
!! CAATTCTAATTACTTACATT+GGG + chr8.3:26404228-26404247 None:intergenic 20.0%
!! GAGAATATAGAAGAAAATTA+AGG - chr8.3:26402172-26402191 MS.gene87427:intron 20.0%
!! GTAATAACATTACATTTGTT+TGG - chr8.3:26403248-26403267 MS.gene87427:intron 20.0%
!! TAGAAAGAAAAGTTTGATAA+AGG - chr8.3:26402329-26402348 MS.gene87427:intron 20.0%
!! TGTCATTACAATACAATTTA+TGG - chr8.3:26400822-26400841 MS.gene87427:intron 20.0%
!! TTGAATAAAGTTATCAACTT+TGG - chr8.3:26401838-26401857 MS.gene87427:intron 20.0%
!! TTGATAAACACAATTTGATT+TGG - chr8.3:26401351-26401370 MS.gene87427:intron 20.0%
!! TTGTATTTACAACTATTGTT+TGG - chr8.3:26404526-26404545 MS.gene87427:CDS 20.0%
!!! AAAAGGTATCATAAAATCAT+TGG + chr8.3:26401800-26401819 None:intergenic 20.0%
!!! AAAGGTATCATAAAATCATT+GGG + chr8.3:26401799-26401818 None:intergenic 20.0%
!!! AAATTTTAAGCCTTGTTTTA+TGG + chr8.3:26405716-26405735 None:intergenic 20.0%
!!! AGATGTTTTTTTATGTAAAC+TGG - chr8.3:26405454-26405473 MS.gene87427:CDS 20.0%
!!! ATGTTTCTTTACATTTTTGT+TGG - chr8.3:26405969-26405988 MS.gene87427:intron 20.0%
!!! ATTTATTGATTAAAGCATCT+AGG + chr8.3:26400788-26400807 None:intergenic 20.0%
!!! ATTTTTAGGTTTTTTGGAAT+GGG - chr8.3:26402466-26402485 MS.gene87427:intron 20.0%
!!! GATGTTTTTTTATGTAAACT+GGG - chr8.3:26405455-26405474 MS.gene87427:CDS 20.0%
!!! GTACCATATTAATCATTTTT+AGG - chr8.3:26402452-26402471 MS.gene87427:intron 20.0%
!!! TCAAATATCAACTATTTTCA+AGG + chr8.3:26400016-26400035 None:intergenic 20.0%
!!! TTATGATTTTATGGTAAGAA+TGG - chr8.3:26402101-26402120 MS.gene87427:intron 20.0%
!!! TTGTTGTGTTTATGATTTTA+TGG - chr8.3:26402092-26402111 MS.gene87427:intron 20.0%
! AAAAGGCCAAATATATTATG+AGG - chr8.3:26402410-26402429 MS.gene87427:CDS 25.0%
! AAACATTTGTGAGACTATTT+GGG - chr8.3:26400603-26400622 MS.gene87427:intron 25.0%
! AAAGTTGTTCCATCTAAAAA+TGG - chr8.3:26404390-26404409 MS.gene87427:intron 25.0%
! AAATGTAAAGAAACATTGGA+AGG + chr8.3:26405965-26405984 None:intergenic 25.0%
! AACTGAGATCAATATGAATT+TGG + chr8.3:26406171-26406190 None:intergenic 25.0%
! AAGTTGAATGTTTACAGATA+TGG - chr8.3:26405863-26405882 MS.gene87427:intron 25.0%
! AAGTTGTTCCATCTAAAAAT+GGG - chr8.3:26404391-26404410 MS.gene87427:intron 25.0%
! AATAAGATGTTTATCCAAAC+AGG - chr8.3:26400761-26400780 MS.gene87427:intron 25.0%
! ACTGAGATCAATATGAATTT+GGG + chr8.3:26406170-26406189 None:intergenic 25.0%
! ATAAATCAAGAACTATTACC+TGG + chr8.3:26401503-26401522 None:intergenic 25.0%
! ATATAGACAAGTCAATTTGT+AGG - chr8.3:26403042-26403061 MS.gene87427:CDS 25.0%
! ATATGAAGTATGTTATGTCT+GGG - chr8.3:26406039-26406058 MS.gene87427:intron 25.0%
! ATATGTAGATGCTAACTTTA+AGG - chr8.3:26404188-26404207 MS.gene87427:intron 25.0%
! ATATTTGATGTATGTACTTG+TGG - chr8.3:26400028-26400047 MS.gene87427:intron 25.0%
! ATCAACTGTCATATATAAGT+AGG - chr8.3:26405785-26405804 MS.gene87427:intron 25.0%
! ATGATTGTAAAGGATTCAAT+TGG - chr8.3:26399461-26399480 MS.gene87427:CDS 25.0%
! ATGGCATCATATATTCAATA+AGG + chr8.3:26401011-26401030 None:intergenic 25.0%
! ATTATAGATTAGTGAATCGA+TGG - chr8.3:26402859-26402878 MS.gene87427:intron 25.0%
! CAATACAATTTATGGAATTG+TGG - chr8.3:26400830-26400849 MS.gene87427:CDS 25.0%
! CATTGATGTTGTTAAACAAA+AGG - chr8.3:26402393-26402412 MS.gene87427:CDS 25.0%
! CTCAATATAAGAAAAGACAT+AGG + chr8.3:26399769-26399788 None:intergenic 25.0%
! GCAATTCTAATTACTTACAT+TGG + chr8.3:26404229-26404248 None:intergenic 25.0%
! GCTGTAAATCATAGAATAAA+AGG - chr8.3:26403846-26403865 MS.gene87427:intron 25.0%
! GGATAAACAACTTAATTAAG+CGG + chr8.3:26405919-26405938 None:intergenic 25.0%
! TAAACATTTGTGAGACTATT+TGG - chr8.3:26400602-26400621 MS.gene87427:intron 25.0%
! TACTTATATATGACAGTTGA+TGG + chr8.3:26405786-26405805 None:intergenic 25.0%
! TAGTTAGAGTTTAGTTAGTT+TGG + chr8.3:26405177-26405196 None:intergenic 25.0%
! TATATGAAGTATGTTATGTC+TGG - chr8.3:26406038-26406057 MS.gene87427:intron 25.0%
! TATGTAGATGCTAACTTTAA+GGG - chr8.3:26404189-26404208 MS.gene87427:intron 25.0%
! TATTACCTGGTAATTCATAA+AGG + chr8.3:26401490-26401509 None:intergenic 25.0%
! TCTCTAAGTTATTCAAATAG+AGG - chr8.3:26401658-26401677 MS.gene87427:intron 25.0%
! TGATTGTAAAGGATTCAATT+GGG - chr8.3:26399462-26399481 MS.gene87427:CDS 25.0%
! TGTATATATACAAACAGAGA+TGG - chr8.3:26405998-26406017 MS.gene87427:intron 25.0%
! TGTATTTGTGAAAGAATTCA+TGG - chr8.3:26402262-26402281 MS.gene87427:intron 25.0%
! TTATCATCAACACAAGAAAT+TGG + chr8.3:26401745-26401764 None:intergenic 25.0%
! TTCAAATTGCATATAGAAGA+AGG - chr8.3:26400245-26400264 MS.gene87427:CDS 25.0%
! TTGTAATGACATGTAATTAC+AGG + chr8.3:26400813-26400832 None:intergenic 25.0%
! TTGTGTTATAAAGTTTGAAC+TGG - chr8.3:26403633-26403652 MS.gene87427:intron 25.0%
! TTGTTTAACAACATCAATGA+CGG + chr8.3:26402392-26402411 None:intergenic 25.0%
! TTTAAAGGAGATGATTGTAA+AGG - chr8.3:26399451-26399470 MS.gene87427:CDS 25.0%
!! AATCCTTAAACTTTTAACAC+TGG + chr8.3:26402903-26402922 None:intergenic 25.0%
!! ACCTTTTGAATTTTTGATGT+GGG - chr8.3:26401813-26401832 MS.gene87427:intron 25.0%
!! ATGAGTTTTTCTAATTTCAG+CGG - chr8.3:26401327-26401346 MS.gene87427:CDS 25.0%
!! ATTTTCTCACATGCTTAATT+TGG - chr8.3:26400204-26400223 MS.gene87427:CDS 25.0%
!! CAATTTTGCATACATAGTTT+TGG - chr8.3:26403219-26403238 MS.gene87427:intron 25.0%
!! GAAGAATCAAATTGTTGATT+TGG - chr8.3:26400396-26400415 MS.gene87427:intron 25.0%
!! TAAAAATTATGTGCCAGTTT+TGG - chr8.3:26401958-26401977 MS.gene87427:CDS 25.0%
!! TAATTTGGAGAAACTGTTTT+TGG - chr8.3:26399679-26399698 MS.gene87427:intron 25.0%
!! TACCTTTTGAATTTTTGATG+TGG - chr8.3:26401812-26401831 MS.gene87427:intron 25.0%
!! TATTGAAAAGAAACAGCTTT+TGG - chr8.3:26399940-26399959 MS.gene87427:intron 25.0%
!! TGCATATTTTTCATTTAAGC+TGG - chr8.3:26401534-26401553 MS.gene87427:CDS 25.0%
!! TTGTAAAAAGCACATAACAA+CGG + chr8.3:26405744-26405763 None:intergenic 25.0%
!!! AATTAAAGGTATCATGATGA+TGG + chr8.3:26404272-26404291 None:intergenic 25.0%
!!! AATTTCTTGTGTTGATGATA+AGG - chr8.3:26401744-26401763 MS.gene87427:intron 25.0%
!!! ACCATCATTTTTACTTTCAT+CGG - chr8.3:26406205-26406224 MS.gene87427:CDS 25.0%
!!! AGAATGGTTGATTTGAAAAT+AGG - chr8.3:26402117-26402136 MS.gene87427:intron 25.0%
!!! ATTTCTAAAATTTGCAGATG+AGG - chr8.3:26401173-26401192 MS.gene87427:intron 25.0%
!!! CATTTTTAGGTTTTTTGGAA+TGG - chr8.3:26402465-26402484 MS.gene87427:intron 25.0%
!!! TGATAGGCTTATATGTTTTT+TGG + chr8.3:26403178-26403197 None:intergenic 25.0%
!!! TTTCTAAAATTTGCAGATGA+GGG - chr8.3:26401174-26401193 MS.gene87427:intron 25.0%
AACATGTAAGTGAGTTATAG+AGG + chr8.3:26404345-26404364 None:intergenic 30.0%
AAGATTCATTAGAGTCTCAT+CGG + chr8.3:26404671-26404690 None:intergenic 30.0%
AAGCATGTGAGAAAATGATT+TGG + chr8.3:26400200-26400219 None:intergenic 30.0%
AATGTTTACAGATATGGAGA+TGG - chr8.3:26405869-26405888 MS.gene87427:intron 30.0%
ACACAAAAACAAAAGAAGTG+TGG + chr8.3:26405384-26405403 None:intergenic 30.0%
ACATGTAAGTGAGTTATAGA+GGG + chr8.3:26404344-26404363 None:intergenic 30.0%
ACCAAAAACTTACTTGCAAA+TGG + chr8.3:26403373-26403392 None:intergenic 30.0%
ACCCACATCAAAAATTCAAA+AGG + chr8.3:26401817-26401836 None:intergenic 30.0%
AGAAATGTGGTTAATGTATG+AGG - chr8.3:26401999-26402018 MS.gene87427:CDS 30.0%
AGGATTAAGTTACTGAAGAA+AGG - chr8.3:26400265-26400284 MS.gene87427:CDS 30.0%
ATAAAACCTTTAGCACAGAA+AGG + chr8.3:26399792-26399811 None:intergenic 30.0%
ATATAATCTACCCAATTAGG+AGG + chr8.3:26399596-26399615 None:intergenic 30.0%
ATCTTCTGATGAAGAAGATA+AGG - chr8.3:26404686-26404705 MS.gene87427:intron 30.0%
ATGCCAGTGTTAAAAGTTTA+AGG - chr8.3:26402897-26402916 MS.gene87427:intron 30.0%
ATGGATAATTCTCTGAATCT+AGG - chr8.3:26401415-26401434 MS.gene87427:intron 30.0%
CATGCGGTAATTAACTTAAT+TGG + chr8.3:26399640-26399659 None:intergenic 30.0%
CATTAACCACATTTCTTCAA+AGG + chr8.3:26401995-26402014 None:intergenic 30.0%
CGTTATTAAGCTTAGTTACT+AGG - chr8.3:26403425-26403444 MS.gene87427:intron 30.0%
CTATGTATGCAAAATTGCAA+AGG + chr8.3:26403216-26403235 None:intergenic 30.0%
CTCATCTTAGCATTTATATC+TGG + chr8.3:26404065-26404084 None:intergenic 30.0%
GAATTATCCATATGCTAGAT+AGG + chr8.3:26401406-26401425 None:intergenic 30.0%
GACAATAAATGCTACAACAA+TGG + chr8.3:26400538-26400557 None:intergenic 30.0%
GAGCAAATGAGTAAGATTAA+CGG - chr8.3:26405537-26405556 MS.gene87427:CDS 30.0%
GATATGTAGATTGTAGTCTT+GGG - chr8.3:26405231-26405250 MS.gene87427:intron 30.0%
GCAAATCATTTGAACTTGAT+AGG + chr8.3:26403194-26403213 None:intergenic 30.0%
GTAATAACCTATCTAGCATA+TGG - chr8.3:26401396-26401415 MS.gene87427:intron 30.0%
GTCATAACTTAGTTGTGTTA+TGG - chr8.3:26400508-26400527 MS.gene87427:intron 30.0%
TAAAGTTTGAACTGGATGTT+TGG - chr8.3:26403641-26403660 MS.gene87427:intron 30.0%
TATAAACGAGGTATACTAGA+TGG - chr8.3:26403531-26403550 MS.gene87427:intron 30.0%
TATAATCTACCCAATTAGGA+GGG + chr8.3:26399595-26399614 None:intergenic 30.0%
TCGGAAGAAAATAAGAAACT+TGG - chr8.3:26399497-26399516 MS.gene87427:CDS 30.0%
TGAAACCTTTATGAATTACC+AGG - chr8.3:26401482-26401501 MS.gene87427:intron 30.0%
TGAATGCCAAATAGATGAAA+TGG + chr8.3:26401030-26401049 None:intergenic 30.0%
TGAGATCAATTCTTATTGAC+TGG - chr8.3:26404081-26404100 MS.gene87427:intron 30.0%
TGATATGTAGATTGTAGTCT+TGG - chr8.3:26405230-26405249 MS.gene87427:intron 30.0%
TGATGAAGAAGATAAGGTAT+TGG - chr8.3:26404692-26404711 MS.gene87427:intron 30.0%
TGATTTACAGCTAAATGAAG+TGG + chr8.3:26403837-26403856 None:intergenic 30.0%
TGCATAAATTTAGATCAGCA+AGG - chr8.3:26403000-26403019 MS.gene87427:intron 30.0%
TGTGAAAGAATTCATGGTTT+GGG - chr8.3:26402268-26402287 MS.gene87427:intron 30.0%
TTAACTCACTTCATCTTCAT+CGG + chr8.3:26404901-26404920 None:intergenic 30.0%
TTACTTACATTGGGAAACAT+AGG + chr8.3:26404219-26404238 None:intergenic 30.0%
TTCAATATCTGACTCAGTTA+TGG + chr8.3:26400314-26400333 None:intergenic 30.0%
TTCTCCAAATTATCATCACA+GGG + chr8.3:26399671-26399690 None:intergenic 30.0%
TTGATAAAGGATATGTGATG+TGG - chr8.3:26402342-26402361 MS.gene87427:intron 30.0%
TTGTAGCATTTATTGTCTAG+AGG - chr8.3:26400541-26400560 MS.gene87427:intron 30.0%
TTGTGAAAGAATTCATGGTT+TGG - chr8.3:26402267-26402286 MS.gene87427:intron 30.0%
TTTCTCCAAATTATCATCAC+AGG + chr8.3:26399672-26399691 None:intergenic 30.0%
! ATGATGCCATTTCATCTATT+TGG - chr8.3:26401021-26401040 MS.gene87427:intron 30.0%
! GCATCATATTGACATTTTTC+TGG - chr8.3:26399900-26399919 MS.gene87427:intron 30.0%
! TGTTTGGATTGACTTATTTG+AGG - chr8.3:26400566-26400585 MS.gene87427:intron 30.0%
! TTCTTTACATTTTTGTTGGC+TGG - chr8.3:26405973-26405992 MS.gene87427:intron 30.0%
! TTGCCATTGTAGAAATTTTC+CGG + chr8.3:26404138-26404157 None:intergenic 30.0%
! TTTACTCCTTTGAAGAAATG+TGG - chr8.3:26401986-26402005 MS.gene87427:CDS 30.0%
! TTTGACTTTGATGAATGACA+CGG - chr8.3:26404003-26404022 MS.gene87427:intron 30.0%
! TTTGTTTATTGCAGCAGTTT+TGG - chr8.3:26401905-26401924 MS.gene87427:CDS 30.0%
!! ACACTCAATTTTGACCAATT+TGG - chr8.3:26402832-26402851 MS.gene87427:intron 30.0%
!! ACTCAGATTCTGAAACAATA+GGG + chr8.3:26406280-26406299 None:intergenic 30.0%
!! ATCAGTTCTCTAATTTGCTT+TGG + chr8.3:26403314-26403333 None:intergenic 30.0%
!! CATCATTTTTACTTTCATCG+GGG - chr8.3:26406207-26406226 MS.gene87427:CDS 30.0%
!! CCATCATTTTTACTTTCATC+GGG - chr8.3:26406206-26406225 MS.gene87427:CDS 30.0%
!! GTTGTTATGTGCTTTTTACA+AGG - chr8.3:26405743-26405762 MS.gene87427:intron 30.0%
!! TGACTGAGATTTTGTTTAAC+AGG - chr8.3:26405407-26405426 MS.gene87427:CDS 30.0%
!! TTCTGAAACAATAGGGAATT+TGG + chr8.3:26406273-26406292 None:intergenic 30.0%
!! TTTGGAGTTTTCGATTCAAT+GGG - chr8.3:26401856-26401875 MS.gene87427:intron 30.0%
!!! TTAAGCCTTGTTTTATGGAA+GGG + chr8.3:26405711-26405730 None:intergenic 30.0%
!!! TTTAAGCCTTGTTTTATGGA+AGG + chr8.3:26405712-26405731 None:intergenic 30.0%
AAAAACATCTCCTGCACATT+AGG + chr8.3:26405444-26405463 None:intergenic 35.0%
AAAAAGAAAAGCGGAATCTG+AGG - chr8.3:26406241-26406260 MS.gene87427:CDS 35.0%
AAAGCTGTTCCTTCCAAAAA+TGG - chr8.3:26404604-26404623 MS.gene87427:intron 35.0%
AAATCATACGTACCATCCAA+CGG + chr8.3:26401287-26401306 None:intergenic 35.0%
AAGCTGTTCCTTCCAAAAAT+GGG - chr8.3:26404605-26404624 MS.gene87427:intron 35.0%
AATCTGATCAAGGATTGTTC+CGG + chr8.3:26403091-26403110 None:intergenic 35.0%
ACGAGAGGATATTACTATTG+AGG - chr8.3:26399549-26399568 MS.gene87427:CDS 35.0%
AGCACTATCAACTTTCTTTG+CGG + chr8.3:26404638-26404657 None:intergenic 35.0%
AGGGTATGCATGAAAGTTTA+GGG + chr8.3:26405692-26405711 None:intergenic 35.0%
AGTTACTAGGTGTTTGATGA+TGG - chr8.3:26403438-26403457 MS.gene87427:intron 35.0%
ATGCCGGAAAATTTCTACAA+TGG - chr8.3:26404132-26404151 MS.gene87427:intron 35.0%
ATTACCAGCTTGAAATGATG+AGG - chr8.3:26401230-26401249 MS.gene87427:intron 35.0%
CAAAATAACGCTCAATGAGA+TGG + chr8.3:26405609-26405628 None:intergenic 35.0%
CAATACAATGACTCTTCCAA+AGG - chr8.3:26403780-26403799 MS.gene87427:CDS 35.0%
CAGAAAAATTGGAGGAACTT+GGG - chr8.3:26400131-26400150 MS.gene87427:intron 35.0%
CAGGAAATTTGAACTTATGC+CGG - chr8.3:26404116-26404135 MS.gene87427:intron 35.0%
CATCATTTCAAGCTGGTAAT+TGG + chr8.3:26401230-26401249 None:intergenic 35.0%
CCCGATGAAAGTAAAAATGA+TGG + chr8.3:26406209-26406228 None:intergenic 35.0%
CGTATAACATGAATTGCAAG+AGG + chr8.3:26402029-26402048 None:intergenic 35.0%
CTAACTGCTAAGGCTATATT+TGG + chr8.3:26405940-26405959 None:intergenic 35.0%
CTTCACAGGAAAAAGAAAAG+CGG - chr8.3:26406232-26406251 MS.gene87427:CDS 35.0%
CTTCTAACCTTCTAGTAGAA+AGG + chr8.3:26404991-26405010 None:intergenic 35.0%
GAGTCATTGTATTGTTCTTG+AGG + chr8.3:26403774-26403793 None:intergenic 35.0%
GCAGATCTGGTTATTAATCT+CGG + chr8.3:26406105-26406124 None:intergenic 35.0%
GGAAAATTTCTACAATGGCA+AGG - chr8.3:26404137-26404156 MS.gene87427:intron 35.0%
GGAGGTTATTAATCTGATCA+AGG + chr8.3:26403101-26403120 None:intergenic 35.0%
GTAAATGCTGCAAACGAATA+TGG - chr8.3:26405579-26405598 MS.gene87427:CDS 35.0%
GTGAAAGAATTCATGGTTTG+GGG - chr8.3:26402269-26402288 MS.gene87427:intron 35.0%
TAATCATTGTCTTCATGTGC+AGG - chr8.3:26400887-26400906 MS.gene87427:intron 35.0%
TATGCTACCTTTCTACTAGA+AGG - chr8.3:26404981-26405000 MS.gene87427:intron 35.0%
TCAAGTTCTTGCTTATCATC+TGG + chr8.3:26400955-26400974 None:intergenic 35.0%
TCACTTGAAGCTTTCTTTGT+GGG + chr8.3:26404864-26404883 None:intergenic 35.0%
TCTATCCCGAAATCAAATCT+TGG - chr8.3:26403065-26403084 MS.gene87427:CDS 35.0%
TCTTCACTTCATCATTAGTC+AGG + chr8.3:26403349-26403368 None:intergenic 35.0%
TGATAAGCAAGAACTTGATG+AGG - chr8.3:26400957-26400976 MS.gene87427:intron 35.0%
TTAGTTCACCAGTGAAGTTA+GGG - chr8.3:26402975-26402994 MS.gene87427:intron 35.0%
TTCACTTGAAGCTTTCTTTG+TGG + chr8.3:26404865-26404884 None:intergenic 35.0%
TTGACTTTGATGAATGACAC+GGG - chr8.3:26404004-26404023 MS.gene87427:intron 35.0%
TTGTAGTTCTTGGAGGTTTA+TGG - chr8.3:26403745-26403764 MS.gene87427:CDS 35.0%
TTTCTACAATGGCAAGGTAT+TGG - chr8.3:26404143-26404162 MS.gene87427:intron 35.0%
! AAAGAAACAGCTTTTGGTCA+TGG - chr8.3:26399946-26399965 MS.gene87427:intron 35.0%
! AACTTTTCTTTCTACGTGCT+TGG + chr8.3:26402323-26402342 None:intergenic 35.0%
! AAGGGTATGCATGAAAGTTT+AGG + chr8.3:26405693-26405712 None:intergenic 35.0%
! AATGATGAGGTTCTTTTGAG+AGG - chr8.3:26401243-26401262 MS.gene87427:intron 35.0%
! AGGCATTTAGGATTGAGATT+TGG - chr8.3:26403610-26403629 MS.gene87427:intron 35.0%
! CAACAAAGGCCTCTAAAAAT+GGG - chr8.3:26404832-26404851 MS.gene87427:intron 35.0%
! CACAAGAAATTGGTGACATA+AGG + chr8.3:26401735-26401754 None:intergenic 35.0%
! GCCATTTGCAAGTAAGTTTT+TGG - chr8.3:26403369-26403388 MS.gene87427:intron 35.0%
! TCATTTAAGCTGGAGTTTTG+TGG - chr8.3:26401544-26401563 MS.gene87427:CDS 35.0%
! TTATTGTCTAGAGGCATGTT+TGG - chr8.3:26400550-26400569 MS.gene87427:intron 35.0%
! TTCTACAATGGCAAGGTATT+GGG - chr8.3:26404144-26404163 MS.gene87427:intron 35.0%
! TTGGAGTTTTCGATTCAATG+GGG - chr8.3:26401857-26401876 MS.gene87427:intron 35.0%
! TTGGGAATTTGATGGTTGAT+AGG - chr8.3:26400060-26400079 MS.gene87427:intron 35.0%
! TTGTGGCAATTTTTGAACGA+AGG - chr8.3:26400847-26400866 MS.gene87427:CDS 35.0%
! TTTAGTTCACCAGTGAAGTT+AGG - chr8.3:26402974-26402993 MS.gene87427:intron 35.0%
!! CACTCAGATTCTGAAACAAT+AGG + chr8.3:26406281-26406300 None:intergenic 35.0%
!! TGTTGATTCTGATGAAGATG+AGG - chr8.3:26404449-26404468 MS.gene87427:intron 35.0%
!!! ACTGTTTTTGGTCTTGGATA+TGG - chr8.3:26399691-26399710 MS.gene87427:intron 35.0%
!!! CTTTGGAGTTTTCGATTCAA+TGG - chr8.3:26401855-26401874 MS.gene87427:intron 35.0%
!!! TAGGAGTTTTGGGAATTTGA+TGG - chr8.3:26400052-26400071 MS.gene87427:intron 35.0%
!!! TTTTGGTTTGAAGGAGGAAT+TGG - chr8.3:26401922-26401941 MS.gene87427:CDS 35.0%
AAGAGTTTGAGGGAAGGATT+TGG - chr8.3:26402513-26402532 MS.gene87427:intron 40.0%
AAGGATTCAATTGGGTCTCT+AGG - chr8.3:26399470-26399489 MS.gene87427:CDS 40.0%
AATCAGCTCCACAGTTTGAT+AGG + chr8.3:26401463-26401482 None:intergenic 40.0%
AATGAGTAAGATTAACGGCG+AGG - chr8.3:26405542-26405561 MS.gene87427:CDS 40.0%
ACAAATCTCCAGTGCAATTC+CGG + chr8.3:26402669-26402688 None:intergenic 40.0%
AGAACCTCATCATTTCAAGC+TGG + chr8.3:26401237-26401256 None:intergenic 40.0%
AGAAGTCGTACTTCTACCTT+TGG + chr8.3:26403799-26403818 None:intergenic 40.0%
AGATCAGCAAGGAGACAAAT+AGG - chr8.3:26403011-26403030 MS.gene87427:intron 40.0%
AGCTATCAGCAGAGTATGAA+GGG - chr8.3:26400098-26400117 MS.gene87427:intron 40.0%
AGCTTAGATCCCTCCTAATT+GGG - chr8.3:26399583-26399602 MS.gene87427:intron 40.0%
AGTGTGGACAATATTACCGT+TGG - chr8.3:26401268-26401287 MS.gene87427:CDS 40.0%
AGTTCTTGCTTATCATCTGG+TGG + chr8.3:26400952-26400971 None:intergenic 40.0%
ATAACCTCCCAACCAAACTA+TGG - chr8.3:26403112-26403131 MS.gene87427:intron 40.0%
ATTGAGCCTTTCTGTGCTAA+AGG - chr8.3:26399783-26399802 MS.gene87427:intron 40.0%
CAGAGATGGTTTGATGCTTA+TGG - chr8.3:26406012-26406031 MS.gene87427:intron 40.0%
CCAGAAAAATTGGAGGAACT+TGG - chr8.3:26400130-26400149 MS.gene87427:intron 40.0%
CTCAATCGCAGATATAAACG+AGG - chr8.3:26403519-26403538 MS.gene87427:intron 40.0%
CTCGTTTATATCTGCGATTG+AGG + chr8.3:26403521-26403540 None:intergenic 40.0%
CTGCTAACCATAGTTTGGTT+GGG + chr8.3:26403122-26403141 None:intergenic 40.0%
GAACTTGGGAATATGTTGAC+TGG - chr8.3:26400145-26400164 MS.gene87427:CDS 40.0%
GATCAGTCTGTTGTAGTTCT+TGG - chr8.3:26403735-26403754 MS.gene87427:CDS 40.0%
GCACTATCAACTTTCTTTGC+GGG + chr8.3:26404637-26404656 None:intergenic 40.0%
GCATACCCTTCCATAAAACA+AGG - chr8.3:26405703-26405722 MS.gene87427:intron 40.0%
GGAGTAAACTCTTCCAAAAC+TGG + chr8.3:26401974-26401993 None:intergenic 40.0%
GTGTGGAAGAGATGAATAGA+CGG + chr8.3:26405367-26405386 None:intergenic 40.0%
GTTGCCCTGTGATGATAATT+TGG - chr8.3:26399664-26399683 MS.gene87427:intron 40.0%
TAAACTCAAGAAGACTCCTC+TGG - chr8.3:26400357-26400376 MS.gene87427:intron 40.0%
TAATAACGCACGCAGTTAAG+AGG + chr8.3:26403413-26403432 None:intergenic 40.0%
TAGCTTAGATCCCTCCTAAT+TGG - chr8.3:26399582-26399601 MS.gene87427:intron 40.0%
TAGTGAATCGATGGATGTGT+CGG - chr8.3:26402868-26402887 MS.gene87427:intron 40.0%
TATGCAATCCCTAACTTCAC+TGG + chr8.3:26402986-26403005 None:intergenic 40.0%
TCTTAACCTTCCGATTCCTA+GGG + chr8.3:26403155-26403174 None:intergenic 40.0%
TCTTATATGGTTGTGCTGTG+AGG - chr8.3:26402802-26402821 MS.gene87427:intron 40.0%
TGAATTTGGGAATTCCTGCA+AGG + chr8.3:26406157-26406176 None:intergenic 40.0%
TGATGAGGCTTTACAAAGAG+AGG - chr8.3:26400972-26400991 MS.gene87427:intron 40.0%
TGATGTATGTACTTGTGGCT+AGG - chr8.3:26400033-26400052 MS.gene87427:intron 40.0%
TGGACAATATTACCGTTGGA+TGG - chr8.3:26401272-26401291 MS.gene87427:CDS 40.0%
TGTGGAAGAGATGAATAGAC+GGG + chr8.3:26405366-26405385 None:intergenic 40.0%
TGTTCGTGTGCATGATTACA+TGG - chr8.3:26404031-26404050 MS.gene87427:intron 40.0%
TGTTTCCTAGAAGTCTACTG+CGG + chr8.3:26402630-26402649 None:intergenic 40.0%
TTAGGAGGGATCTAAGCTAT+AGG + chr8.3:26399581-26399600 None:intergenic 40.0%
TTGTCTTCATGTGCAGGATA+AGG - chr8.3:26400893-26400912 MS.gene87427:intron 40.0%
TTTGAACCGTGGAAAACTCT+TGG - chr8.3:26399526-26399545 MS.gene87427:CDS 40.0%
! AATTGGGTCTCTAGGAATCT+CGG - chr8.3:26399478-26399497 MS.gene87427:CDS 40.0%
! AGTAGACTTCTAGGAAACAG+AGG - chr8.3:26402631-26402650 MS.gene87427:intron 40.0%
! ATCGAGTAGCAGTTCTAACA+GGG - chr8.3:26402545-26402564 MS.gene87427:intron 40.0%
! ATCTAAAAATGGGAGTGCAC+CGG - chr8.3:26404401-26404420 MS.gene87427:intron 40.0%
! ATGTAGATTGTAGTCTTGGG+AGG - chr8.3:26405234-26405253 MS.gene87427:intron 40.0%
! CCAAGTTCCTCCAATTTTTC+TGG + chr8.3:26400133-26400152 None:intergenic 40.0%
! GCAACAAAGGCCTCTAAAAA+TGG - chr8.3:26404831-26404850 MS.gene87427:intron 40.0%
! GTTTTCCACGGTTCAAAGTT+AGG + chr8.3:26399523-26399542 None:intergenic 40.0%
! TAAAGCATCTAGGTCCTGTT+TGG + chr8.3:26400778-26400797 None:intergenic 40.0%
! TACTTGTGGCTAGGAGTTTT+GGG - chr8.3:26400042-26400061 MS.gene87427:intron 40.0%
! TGTCTGGTTATGAGGCATTT+AGG - chr8.3:26403598-26403617 MS.gene87427:intron 40.0%
! TTCCGGCCAAGATTTGATTT+CGG + chr8.3:26403074-26403093 None:intergenic 40.0%
!! TGTTGGTTCTGCTATTTGCA+AGG - chr8.3:26405266-26405285 MS.gene87427:CDS 40.0%
!! TTTTTAGAGGCCTTTGTTGC+AGG + chr8.3:26404831-26404850 None:intergenic 40.0%
!!! GGAGAAACTGTTTTTGGTCT+TGG - chr8.3:26399685-26399704 MS.gene87427:intron 40.0%
!!! TTGCAGCAGTTTTGGTTTGA+AGG - chr8.3:26401913-26401932 MS.gene87427:CDS 40.0%
ACTGAGTAGGATGAGCAGTT+AGG + chr8.3:26400423-26400442 None:intergenic 45.0%
AGGTACCAGTCTACATTGCT+TGG - chr8.3:26401435-26401454 MS.gene87427:intron 45.0%
CAGTCTGTTGTAGTTCTTGG+AGG - chr8.3:26403738-26403757 MS.gene87427:CDS 45.0%
CAGTGTTATGCCTAATGTGC+AGG - chr8.3:26405431-26405450 MS.gene87427:CDS 45.0%
CCAACCAAACTATGGTTAGC+AGG - chr8.3:26403120-26403139 MS.gene87427:intron 45.0%
CCTGCTAACCATAGTTTGGT+TGG + chr8.3:26403123-26403142 None:intergenic 45.0%
CGATCTTTGCTGCAAAAGCA+TGG - chr8.3:26400451-26400470 MS.gene87427:CDS 45.0%
CTAACCATAGTTTGGTTGGG+AGG + chr8.3:26403119-26403138 None:intergenic 45.0%
GACGAGGAAATTGAAGCTGA+TGG - chr8.3:26401202-26401221 MS.gene87427:intron 45.0%
GAGCTATCAGCAGAGTATGA+AGG - chr8.3:26400097-26400116 MS.gene87427:intron 45.0%
GATGGAACAACTTTAGCTGC+AGG + chr8.3:26404384-26404403 None:intergenic 45.0%
GCATAGGCCAGAAAAATTGG+AGG - chr8.3:26400123-26400142 MS.gene87427:intron 45.0%
GCTATCAGCAGAGTATGAAG+GGG - chr8.3:26400099-26400118 MS.gene87427:intron 45.0%
GGAGCATAGGCCAGAAAAAT+TGG - chr8.3:26400120-26400139 MS.gene87427:intron 45.0%
GTCTTAACCTTCCGATTCCT+AGG + chr8.3:26403156-26403175 None:intergenic 45.0%
GTGGAAGAGATGAATAGACG+GGG + chr8.3:26405365-26405384 None:intergenic 45.0%
GTTAATGCGTTGCAGAAGCT+TGG - chr8.3:26402687-26402706 MS.gene87427:intron 45.0%
GTTCACAGTGTCTGGTTATG+AGG - chr8.3:26403590-26403609 MS.gene87427:intron 45.0%
TCACAGGGCAACTAAACATG+CGG + chr8.3:26399656-26399675 None:intergenic 45.0%
TCCCGAAATCAAATCTTGGC+CGG - chr8.3:26403069-26403088 MS.gene87427:CDS 45.0%
TCCTGAGGTGAAGAGTTTGA+GGG - chr8.3:26402503-26402522 MS.gene87427:intron 45.0%
TCTTCGTCAGCTTTCTTTGC+CGG + chr8.3:26404423-26404442 None:intergenic 45.0%
TGAGACGTGAATAGCAGATC+TGG + chr8.3:26406118-26406137 None:intergenic 45.0%
TGGAAGAGATGAATAGACGG+GGG + chr8.3:26405364-26405383 None:intergenic 45.0%
TTCGATTCAATGGGGCTGAT+GGG - chr8.3:26401865-26401884 MS.gene87427:intron 45.0%
TTTCGATTCAATGGGGCTGA+TGG - chr8.3:26401864-26401883 MS.gene87427:intron 45.0%
! AAAGCACCAAAGACTTCCAG+AGG + chr8.3:26400376-26400395 None:intergenic 45.0%
! AACTGGGACAAAGTACTTCC+TGG - chr8.3:26405471-26405490 MS.gene87427:CDS 45.0%
! AAGACTCCTCTGGAAGTCTT+TGG - chr8.3:26400367-26400386 MS.gene87427:intron 45.0%
! ATTGTAGTCTTGGGAGGCAA+TGG - chr8.3:26405240-26405259 MS.gene87427:intron 45.0%
! CAGCTGTTCTTTTACCTTGC+AGG - chr8.3:26406140-26406159 MS.gene87427:intron 45.0%
! CTTTGCTGCAAAAGCATGGA+AGG - chr8.3:26400455-26400474 MS.gene87427:CDS 45.0%
! GATCGAGTAGCAGTTCTAAC+AGG - chr8.3:26402544-26402563 MS.gene87427:intron 45.0%
! GCTAAATGAAGTGGACTCTG+TGG + chr8.3:26403828-26403847 None:intergenic 45.0%
! GCTTTCTTTTCTGACTCCTG+AGG - chr8.3:26402488-26402507 MS.gene87427:intron 45.0%
! GTACTTGTGGCTAGGAGTTT+TGG - chr8.3:26400041-26400060 MS.gene87427:intron 45.0%
! TCCGGCCAAGATTTGATTTC+GGG + chr8.3:26403073-26403092 None:intergenic 45.0%
! TCTCGTCCAAGAGTTTTCCA+CGG + chr8.3:26399535-26399554 None:intergenic 45.0%
! TTGTAGTCTTGGGAGGCAAT+GGG - chr8.3:26405241-26405260 MS.gene87427:intron 45.0%
!! AGAAATACCGACTTCACACG+CGG - chr8.3:26403688-26403707 MS.gene87427:intron 45.0%
!! AGGGAAGGATTTGGTTTGAG+GGG - chr8.3:26402522-26402541 MS.gene87427:intron 45.0%
!! ATGTTGACTGGTCTTGATGC+TGG - chr8.3:26400157-26400176 MS.gene87427:CDS 45.0%
!! GAGGGAAGGATTTGGTTTGA+GGG - chr8.3:26402521-26402540 MS.gene87427:intron 45.0%
!! GGTACACTCCCATTTTTGGA+AGG + chr8.3:26404616-26404635 None:intergenic 45.0%
!! GGTGCACTCCCATTTTTAGA+TGG + chr8.3:26404402-26404421 None:intergenic 45.0%
!! GTTCTTTTGAGAGGTCAGTG+TGG - chr8.3:26401252-26401271 MS.gene87427:intron 45.0%
!! TGAGGGAAGGATTTGGTTTG+AGG - chr8.3:26402520-26402539 MS.gene87427:intron 45.0%
!! TTGGAAGGTGCTAACTGCTA+AGG + chr8.3:26405950-26405969 None:intergenic 45.0%
!!! CAGCAGTTTTGGTTTGAAGG+AGG - chr8.3:26401916-26401935 MS.gene87427:CDS 45.0%
AATGCGTTGCAGAAGCTTGG+AGG - chr8.3:26402690-26402709 MS.gene87427:intron 50.0%
ACCTTCCGATTCCTAGGGAA+AGG + chr8.3:26403150-26403169 None:intergenic 50.0%
ACTGCAGTAGTCTCAACCCT+TGG - chr8.3:26405498-26405517 MS.gene87427:CDS 50.0%
AGGAGCCAAGCAATGTAGAC+TGG + chr8.3:26401443-26401462 None:intergenic 50.0%
AGGGCCTGCTAACCATAGTT+TGG + chr8.3:26403127-26403146 None:intergenic 50.0%
CAGAAGCTTGGAGGTTCTCA+AGG - chr8.3:26402699-26402718 MS.gene87427:intron 50.0%
CTAGGAAACAGAGGAGATGC+TGG - chr8.3:26402640-26402659 MS.gene87427:intron 50.0%
CTCCTGAGGTGAAGAGTTTG+AGG - chr8.3:26402502-26402521 MS.gene87427:intron 50.0%
CTCGCTACCAAAACCTCCAA+GGG + chr8.3:26405517-26405536 None:intergenic 50.0%
CTTGGCCTAACTTTGAACCG+TGG - chr8.3:26399515-26399534 MS.gene87427:CDS 50.0%
GAGGTGAAGAGTTTGAGGGA+AGG - chr8.3:26402507-26402526 MS.gene87427:intron 50.0%
GATCGACGAATCGACTGAGT+AGG + chr8.3:26400436-26400455 None:intergenic 50.0%
GCTTCTGACTTCTATGCCCT+TGG + chr8.3:26405301-26405320 None:intergenic 50.0%
GCTTGGCTCCTATCAAACTG+TGG - chr8.3:26401452-26401471 MS.gene87427:intron 50.0%
GGCTCAGAAACCTGCAACAA+AGG - chr8.3:26404818-26404837 MS.gene87427:intron 50.0%
GTATGTGCGTTCACAGTGTC+TGG - chr8.3:26403582-26403601 MS.gene87427:intron 50.0%
GTGGAAAACTCTTGGACGAG+AGG - chr8.3:26399534-26399553 MS.gene87427:CDS 50.0%
TAACGGCGAGGCTAATGTTG+TGG - chr8.3:26405554-26405573 MS.gene87427:CDS 50.0%
TCCCTCAAACTCTTCACCTC+AGG + chr8.3:26402507-26402526 None:intergenic 50.0%
TCCGATTCCTAGGGAAAGGA+GGG + chr8.3:26403146-26403165 None:intergenic 50.0%
TCCTTTCCCTAGGAATCGGA+AGG - chr8.3:26403146-26403165 MS.gene87427:CDS 50.0%
TGCAAGGCAGCAGTATCCAA+GGG - chr8.3:26405282-26405301 MS.gene87427:CDS 50.0%
TGTTGCAGGTTTCTGAGCCA+AGG + chr8.3:26404817-26404836 None:intergenic 50.0%
TTCAGCCGCAGTAGACTTCT+AGG - chr8.3:26402622-26402641 MS.gene87427:intron 50.0%
TTCCGATTCCTAGGGAAAGG+AGG + chr8.3:26403147-26403166 None:intergenic 50.0%
TTGCAAGGCAGCAGTATCCA+AGG - chr8.3:26405281-26405300 MS.gene87427:CDS 50.0%
! CAGAGTATGAAGGGGAGCAT+AGG - chr8.3:26400107-26400126 MS.gene87427:intron 50.0%
! CTTTCATCGGGGTACTTCAC+AGG - chr8.3:26406218-26406237 MS.gene87427:CDS 50.0%
! GAAGGAACAGCTTTTGCTGC+AGG + chr8.3:26404598-26404617 None:intergenic 50.0%
! GATGAATAGACGGGGGTATG+TGG + chr8.3:26405357-26405376 None:intergenic 50.0%
! GGAGGCGTATGAGCGTTTAA+AGG - chr8.3:26399436-26399455 MS.gene87427:CDS 50.0%
! GTCTCAACCCTTGGAGGTTT+TGG - chr8.3:26405507-26405526 MS.gene87427:CDS 50.0%
! TGACTGGTTGATCGAAGTGC+AGG - chr8.3:26404097-26404116 MS.gene87427:intron 50.0%
! TGCGGGTACACTCCCATTTT+TGG + chr8.3:26404620-26404639 None:intergenic 50.0%
! TTGGGAGGCAATGGGTTTGT+TGG - chr8.3:26405249-26405268 MS.gene87427:intron 50.0%
!! GGGTGCACTCCCATTTTTAG+AGG + chr8.3:26404844-26404863 None:intergenic 50.0%
ACAGAGGAGATGCTGGTCAC+CGG - chr8.3:26402647-26402666 MS.gene87427:intron 55.0%
ATACTCGGCTGCATGGTAGG+AGG + chr8.3:26402588-26402607 None:intergenic 55.0%
CCTCGCTACCAAAACCTCCA+AGG + chr8.3:26405518-26405537 None:intergenic 55.0%
GAACTCTCCGCGTGTGAAGT+CGG + chr8.3:26403698-26403717 None:intergenic 55.0%
GAAGTCTACTGCGGCTGAAG+TGG + chr8.3:26402621-26402640 None:intergenic 55.0%
GAGACTACTGCAGTAGCTCC+AGG + chr8.3:26405492-26405511 None:intergenic 55.0%
GCAGATGAGGGAAGAAGACG+AGG - chr8.3:26401186-26401205 MS.gene87427:intron 55.0%
GCAGTAGTCTCAACCCTTGG+AGG - chr8.3:26405501-26405520 MS.gene87427:CDS 55.0%
GCCCTCCTTTCCCTAGGAAT+CGG - chr8.3:26403142-26403161 MS.gene87427:CDS 55.0%
!!! CCTTGGAGGTTTTGGTAGCG+AGG - chr8.3:26405515-26405534 MS.gene87427:CDS 55.0%
AGGACGCATACTCGGCTGCA+TGG + chr8.3:26402595-26402614 None:intergenic 60.0%
AGTGGCGCAGGACGCATACT+CGG + chr8.3:26402603-26402622 None:intergenic 60.0%
CGCATACTCGGCTGCATGGT+AGG + chr8.3:26402591-26402610 None:intergenic 60.0%
CGGAGAGTTCCAGCTGCAAG+TGG - chr8.3:26403708-26403727 MS.gene87427:intron 60.0%
GCTGGTCACCGGAATTGCAC+TGG - chr8.3:26402658-26402677 MS.gene87427:intron 60.0%
TAGCAGGCCCTCCTTTCCCT+AGG - chr8.3:26403136-26403155 MS.gene87427:CDS 60.0%
CTCGGCTGCATGGTAGGAGG+AGG + chr8.3:26402585-26402604 None:intergenic 65.0%
TACTGCGGCTGAAGTGGCGC+AGG + chr8.3:26402615-26402634 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 26399434 26406301 26399434 ID=MS.gene87427
chr8.3 mRNA 26399434 26406301 26399434 ID=MS.gene87427.t1;Parent=MS.gene87427
chr8.3 exon 26406165 26406301 26406165 ID=MS.gene87427.t1.exon1;Parent=MS.gene87427.t1
chr8.3 CDS 26406165 26406301 26406165 ID=cds.MS.gene87427.t1;Parent=MS.gene87427.t1
chr8.3 exon 26405931 26405946 26405931 ID=MS.gene87427.t1.exon2;Parent=MS.gene87427.t1
chr8.3 CDS 26405931 26405946 26405931 ID=cds.MS.gene87427.t1;Parent=MS.gene87427.t1
chr8.3 exon 26405259 26405653 26405259 ID=MS.gene87427.t1.exon3;Parent=MS.gene87427.t1
chr8.3 CDS 26405259 26405653 26405259 ID=cds.MS.gene87427.t1;Parent=MS.gene87427.t1
chr8.3 exon 26404742 26404826 26404742 ID=MS.gene87427.t1.exon4;Parent=MS.gene87427.t1
chr8.3 CDS 26404742 26404826 26404742 ID=cds.MS.gene87427.t1;Parent=MS.gene87427.t1
chr8.3 exon 26404484 26404545 26404484 ID=MS.gene87427.t1.exon5;Parent=MS.gene87427.t1
chr8.3 CDS 26404484 26404545 26404484 ID=cds.MS.gene87427.t1;Parent=MS.gene87427.t1
chr8.3 exon 26403728 26403816 26403728 ID=MS.gene87427.t1.exon6;Parent=MS.gene87427.t1
chr8.3 CDS 26403728 26403816 26403728 ID=cds.MS.gene87427.t1;Parent=MS.gene87427.t1
chr8.3 exon 26403128 26403206 26403128 ID=MS.gene87427.t1.exon7;Parent=MS.gene87427.t1
chr8.3 CDS 26403128 26403206 26403128 ID=cds.MS.gene87427.t1;Parent=MS.gene87427.t1
chr8.3 exon 26403015 26403091 26403015 ID=MS.gene87427.t1.exon8;Parent=MS.gene87427.t1
chr8.3 CDS 26403015 26403091 26403015 ID=cds.MS.gene87427.t1;Parent=MS.gene87427.t1
chr8.3 exon 26402356 26402432 26402356 ID=MS.gene87427.t1.exon9;Parent=MS.gene87427.t1
chr8.3 CDS 26402356 26402432 26402356 ID=cds.MS.gene87427.t1;Parent=MS.gene87427.t1
chr8.3 exon 26401887 26402045 26401887 ID=MS.gene87427.t1.exon10;Parent=MS.gene87427.t1
chr8.3 CDS 26401887 26402045 26401887 ID=cds.MS.gene87427.t1;Parent=MS.gene87427.t1
chr8.3 exon 26401505 26401621 26401505 ID=MS.gene87427.t1.exon11;Parent=MS.gene87427.t1
chr8.3 CDS 26401505 26401621 26401505 ID=cds.MS.gene87427.t1;Parent=MS.gene87427.t1
chr8.3 exon 26401265 26401357 26401265 ID=MS.gene87427.t1.exon12;Parent=MS.gene87427.t1
chr8.3 CDS 26401265 26401357 26401265 ID=cds.MS.gene87427.t1;Parent=MS.gene87427.t1
chr8.3 exon 26401028 26401143 26401028 ID=MS.gene87427.t1.exon13;Parent=MS.gene87427.t1
chr8.3 CDS 26401028 26401143 26401028 ID=cds.MS.gene87427.t1;Parent=MS.gene87427.t1
chr8.3 exon 26400824 26400878 26400824 ID=MS.gene87427.t1.exon14;Parent=MS.gene87427.t1
chr8.3 CDS 26400824 26400878 26400824 ID=cds.MS.gene87427.t1;Parent=MS.gene87427.t1
chr8.3 exon 26400407 26400495 26400407 ID=MS.gene87427.t1.exon15;Parent=MS.gene87427.t1
chr8.3 CDS 26400407 26400495 26400407 ID=cds.MS.gene87427.t1;Parent=MS.gene87427.t1
chr8.3 exon 26400135 26400301 26400135 ID=MS.gene87427.t1.exon16;Parent=MS.gene87427.t1
chr8.3 CDS 26400135 26400301 26400135 ID=cds.MS.gene87427.t1;Parent=MS.gene87427.t1
chr8.3 exon 26399434 26399573 26399434 ID=MS.gene87427.t1.exon17;Parent=MS.gene87427.t1
chr8.3 CDS 26399434 26399573 26399434 ID=cds.MS.gene87427.t1;Parent=MS.gene87427.t1
Gene Sequence

>MS.gene87427

ATGGAGGCGTATGAGCGTTTAAAGGAGATGATTGTAAAGGATTCAATTGGGTCTCTAGGAATCTCGGAAGAAAATAAGAAACTTGGCCTAACTTTGAACCGTGGAAAACTCTTGGACGAGAGGATATTACTATTGAGGTGAGTGCCTATAGCTTAGATCCCTCCTAATTGGGTAGATTATATTTTGATTGTGTGAGATGAGTACCAATTAAGTTAATTACCGCATGTTTAGTTGCCCTGTGATGATAATTTGGAGAAACTGTTTTTGGTCTTGGATATGGAATTAGTTTATATTATACATAATTTCAAAATTGGACTTGAGTATGTGTTCTACCTATGTCTTTTCTTATATTGAGCCTTTCTGTGCTAAAGGTTTTATTTTTTTGTGTAATGCAAAATATTGTTTTTAAGTAAATAAAACTGTATTTTCAATTCCTTATGCTTATGAAAAAATATTACTTTTTTTAGCATCATATTGACATTTTTCTGGAACCCCACTTAAATTTTTATTGAAAAGAAACAGCTTTTGGTCATGGATGAAAAAATAGTTGATATTTGATAATATAATTTTCAAAATTGGCCTTGAAAATAGTTGATATTTGATGTATGTACTTGTGGCTAGGAGTTTTGGGAATTTGATGGTTGATAGGTTCAAGATTGTTATGAGCTATCAGCAGAGTATGAAGGGGAGCATAGGCCAGAAAAATTGGAGGAACTTGGGAATATGTTGACTGGTCTTGATGCTGGAGATTCTATTGTTATAGCCAAATCATTTTCTCACATGCTTAATTTGGCAAATTTAGCTGAAGAAGTTCAAATTGCATATAGAAGAAGGATTAAGTTACTGAAGAAAGGTGATTTTGCTGATGAAAATTCTTCCATAACTGAGTCAGATATTGAAGAGATATTCAAGAGTCTTGTGACTAAACTCAAGAAGACTCCTCTGGAAGTCTTTGGTGCTTTGAAGAATCAAATTGTTGATTTGGTCCTAACTGCTCATCCTACTCAGTCGATTCGTCGATCTTTGCTGCAAAAGCATGGAAGGTTTGTCCATTATATTTGTTAATAACTTTCTGTCATAACTTAGTTGTGTTATGGTAGTCCATTGTTGTAGCATTTATTGTCTAGAGGCATGTTTGGATTGACTTATTTGAGGTTATCTATTAGCATAAACATTTGTGAGACTATTTGGGAGAATTTATATAAACAACGTATGACTGTCTATAGCTTACGAAAACAATTTATAGTTTATATGAAAACAGTTATCAAAGTAGTTTATAATAAGCACTTATATGATGAATGCTTATAAGAATAAGTGCTTGATTAAGAATAAGATGTTTATCCAAACAGGACCTAGATGCTTTAATCAATAAATGTCCTGTAATTACATGTCATTACAATACAATTTATGGAATTGTGGCAATTTTTGAACGAAGGATTAGTCTTTGTGTTAGTAATCATTGTCTTCATGTGCAGGATAAGGAATAACTTAACACAGTTGTATGCTAAAGACATACCACCAGATGATAAGCAAGAACTTGATGAGGCTTTACAAAGAGAGGTACATGCTTGATTCCTTATTGAATATATGATGCCATTTCATCTATTTGGCATTCAGATGACTCTCTGAGTTGATTGATATATAAATATTAATTCTGAAAATAACTTTTTTTATTTGTTTATTTTGTTTCTCAATTTTGAAATTAGCTAACATTGACTCATTAAGTTTTCATCATATCTATTTCTAAAATTTGCAGATGAGGGAAGAAGACGAGGAAATTGAAGCTGATGGTGCCAATTACCAGCTTGAAATGATGAGGTTCTTTTGAGAGGTCAGTGTGGACAATATTACCGTTGGATGGTACGTATGATTTATGTAACATTTTACGTATGTATGAGTTTTTCTAATTTCAGCGGTTTGATAAACACAATTTGATTTGGTTCAAATTTCATTGTGTTATTTGTAATAACCTATCTAGCATATGGATAATTCTCTGAATCTAGGTACCAGTCTACATTGCTTGGCTCCTATCAAACTGTGGAGCTGATTGAAACCTTTATGAATTACCAGGTAATAGTTCTTGATTTATATTTTTTTTCTTGCATATTTTTCATTTAAGCTGGAGTTTTGTGGATTTGTATAATTATATGTTATGATGAAAACTAAATGTTACTGTAGTTTACTATTTAATGTGAATGTACTCAATATATTATTTTTTTACGCTTCTCTAAGTTATTCAAATAGAGGATTATAAGAGATTCATGAAAAGTAGAAGTCTCTTAGTTTGAATCAATTTCTCCTTATGTCACCAATTTCTTGTGTTGATGATAAGGTAATTTGATTTTGAATTTGATTTTAGATACCCAATGATTTTATGATACCTTTTGAATTTTTGATGTGGGTTTTGAATAAAGTTATCAACTTTGGAGTTTTCGATTCAATGGGGCTGATGGGTTTGTTTTGTTTTTTGTTTTGTTTATTGCAGCAGTTTTGGTTTGAAGGAGGAATTGGAAAAATGTAGAAGTAAAAATTATGTGCCAGTTTTGGAAGAGTTTACTCCTTTGAAGAAATGTGGTTAATGTATGAGGTTCTCCTCTTGCAATTCATGTTATACGTTGATTTTGCAAATGATTTAGTATGTTTATTCTTGAAATTTTATTGTTGTGTTTATGATTTTATGGTAAGAATGGTTGATTTGAAAATAGGAAGATAACTGCAGTGTTAATATAATTGCATAAGAGAATATAGAAGAAAATTAAGGTGGTTGTTGCTATTTAAATTACGTGTGATGTATAAACAAATGTATAATTTTTATTAGATGATCAATATGTATTTGTGAAAGAATTCATGGTTTGGGGAATATGTGTGTCATGAATTGAGATGTTTCCAAGCACGTAGAAAGAAAAGTTTGATAAAGGATATGTGATGTGGATGCACGCTATGAACTCTTGTAAGCCGTCATTGATGTTGTTAAACAAAAGGCCAAATATATTATGAGGTCATTTTAATTTAATGTATGTACCATATTAATCATTTTTAGGTTTTTTGGAATGGGCTTTCTTTTCTGACTCCTGAGGTGAAGAGTTTGAGGGAAGGATTTGGTTTGAGGGGATCGAGTAGCAGTTCTAACAGGGCAGTTTCGTCGTCTCCTCCTCCTACCATGCAGCCGAGTATGCGTCCTGCGCCACTTCAGCCGCAGTAGACTTCTAGGAAACAGAGGAGATGCTGGTCACCGGAATTGCACTGGAGATTTGTTAATGCGTTGCAGAAGCTTGGAGGTTCTCAAGGTATGAATTTGAAACTTTACTGTTTTTGTGATGTAGCGTATATTTCACTTTCTTAAATTAGAAATGTACATATATTTAATATCTTATATGGTTGTGCTGTGAGGTTTCAAAACACTCAATTTTGACCAATTTGGAAATATTATAGATTAGTGAATCGATGGATGTGTCGGAACTGAATGCCAGTGTTAAAAGTTTAAGGATTTGATGCTTGAAGTTGTGTTGATGTGAAATTTTAAAGAAAATGTTTATTCTGTTTAGTTCACCAGTGAAGTTAGGGATTGCATAAATTTAGATCAGCAAGGAGACAAATAGGAGTGTTATATATAGACAAGTCAATTTGTAGGTCTATCCCGAAATCAAATCTTGGCCGGAACAATCCTTGATCAGATTAATAACCTCCCAACCAAACTATGGTTAGCAGGCCCTCCTTTCCCTAGGAATCGGAAGGTTAAGACCAAAAAACATATAAGCCTATCAAGTTCAAATGATTTGCCTTTGCAATTTTGCATACATAGTTTTGGTATGTTGTAATAACATTACATTTGTTTGGTTCATTTGTCTAATTAACTGTTTTAACTGCAGCAGCAACTCCAAAGCAAATTAGAGAACTGATGCAAGTTGATAGCCTGACTAATGATGAAGTGAAGAGCCATTTGCAAGTAAGTTTTTGGTTTTCTTTTTATTTTTCTCCTCTTAACTGCGTGCGTTATTAAGCTTAGTTACTAGGTGTTTGATGATGGTTTATGATATAGTTAATTTAATACAATATTAATTATATTATGTTGCTATTGAAGTATCCTCAATCGCAGATATAAACGAGGTATACTAGATGGTATTTATGATGATGATGAATATCATATTGTATGTGCGTTCACAGTGTCTGGTTATGAGGCATTTAGGATTGAGATTTGGTTGTGTTATAAAGTTTGAACTGGATGTTTGGCATATGATTCTTGATTATTATTGCAGAAATACCGACTTCACACGCGGAGAGTTCCAGCTGCAAGTGGAACTGATCAGTCTGTTGTAGTTCTTGGAGGTTTATGGATGCCTCAAGAACAATACAATGACTCTTCCAAAGGTAGAAGTACGACTTCTGCTTCTCCACAGAGTCCACTTCATTTAGCTGTAAATCATAGAATAAAAGGATAATGAATTGGCTGCAACTGAGTATATTGATGACATCTACAAGTATTACAAACTCTCTGAAGTAATGTTCTATGCTTTGTTTTGTGTTTCTTCTCTATATATATATCTCTACTTTTTTAACATTATCTAATATTTTGACTTTGATGAATGACACGGGATGATGTTCGTGTGCATGATTACATGGATTCACAACCAGATATAAATGCTAAGATGAGATCAATTCTTATTGACTGGTTGATCGAAGTGCAGGAAATTTGAACTTATGCCGGAAAATTTCTACAATGGCAAGGTATTGGGAGAAAGTCTTGATTTGATCAAATATGTAGATGCTAACTTTAAGGGAACACCTATGTTTCCCAATGTAAGTAATTAGAATTGCACATTAAATTCTCTTTTTGTCCATCATCATGATACCTTTAATTTATAGCTAAAACATTGTGTTGCCAACTTTTTGTTTTGTTTATTAAAACTCCCTCTATAACTCACTTACATGTTTTTTATTGTTCAGAAACCTGCAGCTAAAGTTGTTCCATCTAAAAATGGGAGTGCACCGGCAAAGAAAGCTGACGAAGATTCTGATGTTGATTCTGATGAAGATGAGGTATTAGACATTTTGAAGTTTATTGCATGATGATAATACCCTTAATTTTATATCATTGTATTTACAACTATTGTTTGGTTTTTTAAAATGTTGTTTTAAATTTTTTTTTTTTATGGTTCAGAAACCTGCAGCAAAAGCTGTTCCTTCCAAAAATGGGAGTGTACCCGCAAAGAAAGTTGATAGTGCTGATAGTTCTTCCGATGAGACTCTAATGAATCTTCTGATGAAGAAGATAAGGTATTGGACATTTTGAAGTTAATTGCACGATAAATCTTAATTTATATTATTGTATTGACAACTTCTTTATTTTGTTTTTTAAAATGGCCATTAAATATATATTTTTCCTTGGCTCAGAAACCTGCAACAAAGGCCTCTAAAAATGGGAGTGCACCCACAAAGAAAGCTTCAAGTGAATCTGATGAAGAATCCGATGAAGATGAAGTGAGTTAAACCTTTCATATGATTTGATTACATATAACCATAAGAACAGTAATATTTAAATGTCGCTTATATGCTACCTTTCTACTAGAAGGTTAGAAGACGCAAGTATTCATTTATAATGCTTTGATGTTCTAACTTATATAGAGCTTTGATGTTCTAACTTATATAGTGAATTAATTGATAGGATTTTGTAAAATGAATACATCAAGATCATTATATAGAGCTTAGAAGAAGATTAACTTATTAACAAATTAACTAAAATCCAAACTAACTAAACTCTAACTAACTAACTAAATTGTAACTCAATTTCTGTATTTCTGATATGTAGATTGTAGTCTTGGGAGGCAATGGGTTTGTTGGTTCTGCTATTTGCAAGGCAGCAGTATCCAAGGGCATAGAAGTCAGAAGCTTAAACAAGTTTGTGACACGTCAAACTAATTCACCACATACCCCCGTCTATTCATCTCTTCCACACTTCTTTTGTTTTTGTGTATTTGACTGAGATTTTGTTTAACAGGTCAGTGTTATGCCTAATGTGCAGGAGATGTTTTTTTATGTAAACTGGGACAAAGTACTTCCTGGAGCTACTGCAGTAGTCTCAACCCTTGGAGGTTTTGGTAGCGAGGAGCAAATGAGTAAGATTAACGGCGAGGCTAATGTTGTGGCTGTAAATGCTGCAAACGAATATGGTGAGCCATCTCATTGAGCGTTATTTTGCAGTTAAATTATTCACTTGCATTTATCTTTTATCTTTCATGTTTGACTCTATTATTGTAGCCCTAAACTTTCATGCATACCCTTCCATAAAACAAGGCTTAAAATTTTGAGACCGTTGTTATGTGCTTTTTACAAGGCGAGTTCATTCTAATTTCCATCAACTGTCATATATAAGTAGGTATAGCTTGATTTGAAGTTGAAGTGCATAGAATTGTGTGATAGTATCATTAGATCAAGTTGAATGTTTACAGATATGGAGATGGATAAGTGAAATAAATTAGACATAACCGCTTAATTAAGTTGTTTATCCAAATATAGCCTTAGCAGTTAGCACCTTCCAATGTTTCTTTACATTTTTGTTGGCTGGTTTGTATATATACAAACAGAGATGGTTTGATGCTTATGGCTTTATATGAAGTATGTTATGTCTGGGATATTCTTTTGCGATGATGCTTTAAATTTATTTATGAAGTCCGAGATTAATAACCAGATCTGCTATTCACGTCTCACGCAGCTGTTCTTTTACCTTGCAGGAATTCCCAAATTCATATTGATCTCAGTTCATGACTATAACTTACCATCATTTTTACTTTCATCGGGGTACTTCACAGGAAAAAGAAAAGCGGAATCTGAGGTTCTATCCAAATTCCCTATTGTTTCAGAATCTGAGTGA
Protein sequence

>MS.gene87427.t1

MEAYERLKEMIVKDSIGSLGISEENKKLGLTLNRGKLLDERILLLSLSVLKVQDCYELSAEYEGEHRPEKLEELGNMLTGLDAGDSIVIAKSFSHMLNLANLAEEVQIAYRRRIKLLKKGDFADENSSITESDIEEIFKSLVTKLKKTPLEVFGALKNQIVDLVLTAHPTQSIRRSLLQKHGRIRNNLTQLYAKDIPPDDKQELDEALQREMREEDEEIEADGANYQLEMMSSFGLKEELEKCRSKNYVPVLEEFTPLKKCGFGLRGSSSSSNRAVSSSPPPTMQPSMKQRRCWSPELHWRFVNALQKLGGSQAATPKQIRELMQVDSLTNDEVKSHLQKYRLHTRRVPAASGTDQSVVVLGGLWMPQEQYNDSSKGRSTTSASPQSPLHLACRKFELMPENFYNGKVLGESLDLIKYVDANFKGTPMFPNKPAAKVVPSKNGSAPAKKADEDSDVDSDEDEKPAAKAVPSKNGSVPAKKVDSADSSSDETLMNLLMKKISAPTKKASSESDEESDEDEIVVLGGNGFVGSAICKAAVSKGIEVRSLNNVMPNVQEMFFYVNWDKVLPGATAVVSTLGGFGSEEQMSKINGEANVVAVNAANEYGIPKFILISVHDYNLPSFLLSSGYFTGKRKAESEVLSKFPIVSESE