Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87437.t1 | KEH20443.1 | 91 | 201 | 18 | 0 | 25 | 225 | 139 | 339 | 2.30E-97 | 365.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87437.t1 | Q6Z2G9 | 39.5 | 210 | 114 | 7 | 24 | 223 | 159 | 365 | 4.5e-25 | 116.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87437.t1 | A0A072TUE8 | 91.0 | 201 | 18 | 0 | 25 | 225 | 139 | 339 | 1.7e-97 | 365.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene87437.t1 | TF | TUB |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87437.t1 | MTR_8g077675 | 91.045 | 201 | 18 | 0 | 25 | 225 | 139 | 339 | 2.74e-130 | 373 |
| MS.gene87437.t1 | MTR_8g077195 | 60.976 | 205 | 74 | 4 | 27 | 227 | 146 | 348 | 3.13e-76 | 236 |
| MS.gene87437.t1 | MTR_5g020580 | 48.684 | 228 | 103 | 7 | 7 | 227 | 132 | 352 | 5.08e-57 | 186 |
| MS.gene87437.t1 | MTR_8g077620 | 58.523 | 176 | 53 | 3 | 25 | 200 | 143 | 298 | 8.94e-57 | 185 |
| MS.gene87437.t1 | MTR_8g077650 | 49.733 | 187 | 75 | 5 | 3 | 179 | 70 | 247 | 3.25e-46 | 156 |
| MS.gene87437.t1 | MTR_1g022370 | 37.441 | 211 | 114 | 7 | 23 | 227 | 160 | 358 | 2.44e-32 | 122 |
| MS.gene87437.t1 | MTR_2g020280 | 42.667 | 150 | 72 | 5 | 29 | 167 | 35 | 181 | 6.40e-29 | 110 |
| MS.gene87437.t1 | MTR_2g020280 | 43.046 | 151 | 70 | 6 | 29 | 167 | 134 | 280 | 3.10e-28 | 110 |
| MS.gene87437.t1 | MTR_1g098790 | 36.052 | 233 | 126 | 9 | 9 | 223 | 129 | 356 | 2.74e-27 | 108 |
| MS.gene87437.t1 | MTR_2g007930 | 42.484 | 153 | 73 | 6 | 9 | 151 | 130 | 277 | 3.52e-24 | 99.8 |
| MS.gene87437.t1 | MTR_1g088960 | 37.234 | 188 | 91 | 8 | 18 | 184 | 131 | 312 | 3.09e-23 | 97.1 |
| MS.gene87437.t1 | MTR_2g076200 | 40.625 | 128 | 70 | 4 | 29 | 152 | 137 | 262 | 3.65e-19 | 85.1 |
| MS.gene87437.t1 | MTR_8g077640 | 57.333 | 75 | 14 | 1 | 27 | 83 | 186 | 260 | 6.55e-18 | 81.6 |
| MS.gene87437.t1 | MTR_2g076210 | 37.302 | 126 | 69 | 5 | 30 | 150 | 133 | 253 | 1.09e-13 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87437.t1 | AT2G47900 | 42.446 | 139 | 73 | 4 | 23 | 156 | 142 | 278 | 2.41e-29 | 113 |
| MS.gene87437.t1 | AT2G47900 | 42.446 | 139 | 73 | 4 | 23 | 156 | 142 | 278 | 2.41e-29 | 113 |
| MS.gene87437.t1 | AT2G47900 | 39.869 | 153 | 85 | 4 | 9 | 156 | 129 | 279 | 2.68e-29 | 113 |
| MS.gene87437.t1 | AT1G76900 | 46.923 | 130 | 59 | 5 | 30 | 151 | 154 | 281 | 3.79e-28 | 110 |
| MS.gene87437.t1 | AT1G76900 | 46.923 | 130 | 59 | 5 | 30 | 151 | 154 | 281 | 3.79e-28 | 110 |
| MS.gene87437.t1 | AT1G76900 | 46.923 | 130 | 59 | 5 | 30 | 151 | 154 | 281 | 3.79e-28 | 110 |
| MS.gene87437.t1 | AT1G47270 | 34.513 | 226 | 116 | 11 | 9 | 227 | 121 | 321 | 2.78e-26 | 105 |
| MS.gene87437.t1 | AT1G47270 | 34.513 | 226 | 116 | 11 | 9 | 227 | 145 | 345 | 3.94e-26 | 105 |
| MS.gene87437.t1 | AT1G47270 | 34.513 | 226 | 116 | 11 | 9 | 227 | 146 | 346 | 3.98e-26 | 105 |
| MS.gene87437.t1 | AT1G43640 | 33.333 | 225 | 136 | 7 | 9 | 227 | 65 | 281 | 1.78e-24 | 99.8 |
| MS.gene87437.t1 | AT1G43640 | 33.333 | 225 | 136 | 7 | 9 | 227 | 131 | 347 | 2.21e-24 | 100 |
| MS.gene87437.t1 | AT1G25280 | 35.160 | 219 | 114 | 10 | 30 | 223 | 156 | 371 | 2.97e-24 | 100 |
| MS.gene87437.t1 | AT2G18280 | 34.722 | 216 | 116 | 11 | 19 | 227 | 132 | 329 | 5.40e-23 | 96.3 |
| MS.gene87437.t1 | AT2G18280 | 34.722 | 216 | 116 | 11 | 19 | 227 | 132 | 329 | 5.40e-23 | 96.3 |
| MS.gene87437.t1 | AT1G25280 | 34.184 | 196 | 104 | 9 | 50 | 223 | 1 | 193 | 4.77e-21 | 89.0 |
| MS.gene87437.t1 | AT1G25280 | 34.184 | 196 | 104 | 9 | 50 | 223 | 1 | 193 | 4.77e-21 | 89.0 |
| MS.gene87437.t1 | AT1G53320 | 50.526 | 95 | 43 | 2 | 30 | 121 | 140 | 233 | 7.44e-21 | 90.1 |
| MS.gene87437.t1 | AT3G06380 | 37.097 | 124 | 67 | 6 | 30 | 148 | 38 | 155 | 8.80e-17 | 77.8 |
| MS.gene87437.t1 | AT3G06380 | 37.097 | 124 | 67 | 6 | 30 | 148 | 130 | 247 | 1.80e-16 | 77.8 |
| MS.gene87437.t1 | AT5G18680 | 35.075 | 134 | 79 | 5 | 29 | 157 | 43 | 173 | 2.46e-16 | 76.6 |
| MS.gene87437.t1 | AT5G18680 | 35.075 | 134 | 79 | 5 | 29 | 157 | 135 | 265 | 4.63e-16 | 76.6 |
Find 53 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTACCTGCTTCACTGAAAT+AGG | 0.231730 | 8.3:-26582964 | None:intergenic |
| CTACATGCTGGAACTCTTCT+AGG | 0.289252 | 8.3:-26583808 | None:intergenic |
| AGTGCTGGTGAACGAGAAAA+AGG | 0.350410 | 8.3:-26583982 | None:intergenic |
| CCATGGTATGAATCTTTCAT+TGG | 0.357531 | 8.3:-26584018 | None:intergenic |
| ACAAATTTGTTGGTAATGTA+AGG | 0.360129 | 8.3:+26583572 | MS.gene87437:CDS |
| ATTACCAACAAATTTGTTGC+TGG | 0.362843 | 8.3:-26583566 | None:intergenic |
| GATTGAACTGCAGTATTATC+TGG | 0.363440 | 8.3:-26583742 | None:intergenic |
| GATGCGCCACCACACTAATA+TGG | 0.363966 | 8.3:-26584158 | None:intergenic |
| ATAGAGCTTTGACTCTGTTC+TGG | 0.366906 | 8.3:-26584057 | None:intergenic |
| CAAGCCAGCAACAAATTTGT+TGG | 0.370996 | 8.3:+26583562 | MS.gene87437:CDS |
| TGATCAACCGATCCAGTGTC+GGG | 0.421360 | 8.3:+26584119 | MS.gene87437:CDS |
| TCTGTTCTGGTAGCTCTGAT+AGG | 0.423822 | 8.3:-26584044 | None:intergenic |
| CCAGCATGTAGCCATCTTGT+TGG | 0.449241 | 8.3:+26583820 | MS.gene87437:CDS |
| ATTTCCTATTTCAGTGAAGC+AGG | 0.455183 | 8.3:+26582960 | MS.gene87437:CDS |
| TGCTAAGGATACGACAAATT+CGG | 0.458151 | 8.3:-26583524 | None:intergenic |
| CGGAGCATCGTCCCCGACAC+TGG | 0.472417 | 8.3:-26584131 | None:intergenic |
| ATGATGCAGTTGATCTTTCG+TGG | 0.477066 | 8.3:-26583880 | None:intergenic |
| TGTTGGCACCGTTTCCTATG+AGG | 0.484236 | 8.3:+26583837 | MS.gene87437:CDS |
| CCCGTCTCAGCTCTTTATGA+AGG | 0.499502 | 8.3:+26583913 | MS.gene87437:CDS |
| AATGACAGTGATCACCTCAT+AGG | 0.505003 | 8.3:-26583851 | None:intergenic |
| TGTCGGGGACGATGCTCCGC+GGG | 0.509673 | 8.3:+26584135 | MS.gene87437:CDS |
| AATATTGGAGGTAACGATGT+TGG | 0.541161 | 8.3:-26583952 | None:intergenic |
| GTAGCTCTGATAGGCTTCCA+TGG | 0.546817 | 8.3:-26584035 | None:intergenic |
| CGCGGGCCATATTAGTGTGG+TGG | 0.555680 | 8.3:+26584152 | MS.gene87437:CDS |
| CCGTCTCAGCTCTTTATGAA+GGG | 0.557348 | 8.3:+26583914 | MS.gene87437:CDS |
| TTAGAATTCAATATCCCGCT+TGG | 0.557985 | 8.3:-26583775 | None:intergenic |
| CCCTTCATAAAGAGCTGAGA+CGG | 0.565562 | 8.3:-26583914 | None:intergenic |
| AATCAAATTGTCGACCAAGC+GGG | 0.569918 | 8.3:+26583761 | MS.gene87437:CDS |
| AGTGATCACCTCATAGGAAA+CGG | 0.575348 | 8.3:-26583845 | None:intergenic |
| TTGATCAACCGATCCAGTGT+CGG | 0.575709 | 8.3:+26584118 | MS.gene87437:CDS |
| CCAATGAAAGATTCATACCA+TGG | 0.582725 | 8.3:+26584018 | MS.gene87437:CDS |
| CCTTCATAAAGAGCTGAGAC+GGG | 0.585813 | 8.3:-26583913 | None:intergenic |
| CCAACAAGATGGCTACATGC+TGG | 0.587008 | 8.3:-26583820 | None:intergenic |
| AGGAAACGGTGCCAACAAGA+TGG | 0.588598 | 8.3:-26583831 | None:intergenic |
| ACTGTCGTATATAGAGAACT+TGG | 0.591158 | 8.3:-26583713 | None:intergenic |
| GTGATCCTTCCACATTGTTG+AGG | 0.591561 | 8.3:-26582937 | None:intergenic |
| AGAGATGTTTATGAGTGTCA+AGG | 0.596164 | 8.3:-26584085 | None:intergenic |
| CATCGTCCCCGACACTGGAT+CGG | 0.599982 | 8.3:-26584126 | None:intergenic |
| GGAGGTAACGATGTTGGAGT+CGG | 0.604172 | 8.3:-26583946 | None:intergenic |
| AGACTCCTCAACAATGTGGA+AGG | 0.611801 | 8.3:+26582932 | MS.gene87437:CDS |
| CGTCTCAGCTCTTTATGAAG+GGG | 0.613180 | 8.3:+26583915 | MS.gene87437:CDS |
| GAGATGTTTATGAGTGTCAA+GGG | 0.619622 | 8.3:-26584084 | None:intergenic |
| GTCTCAGCTCTTTATGAAGG+GGG | 0.630906 | 8.3:+26583916 | MS.gene87437:CDS |
| AAAGGTATATCAAATATTGG+AGG | 0.636262 | 8.3:-26583964 | None:intergenic |
| CACCACACTAATATGGCCCG+CGG | 0.637266 | 8.3:-26584151 | None:intergenic |
| CAATCAAATTGTCGACCAAG+CGG | 0.651811 | 8.3:+26583760 | MS.gene87437:CDS |
| CTCCGCGGGCCATATTAGTG+TGG | 0.653740 | 8.3:+26584149 | MS.gene87437:CDS |
| GTGTCGGGGACGATGCTCCG+CGG | 0.659179 | 8.3:+26584134 | MS.gene87437:CDS |
| GATCAACCGATCCAGTGTCG+GGG | 0.678042 | 8.3:+26584120 | MS.gene87437:CDS |
| GTCAAGACTCCTCAACAATG+TGG | 0.680111 | 8.3:+26582928 | MS.gene87437:CDS |
| TGAACTGCAGTATTATCTGG+TGG | 0.690164 | 8.3:-26583739 | None:intergenic |
| AGTCTTGACGATCTCTAACG+TGG | 0.698293 | 8.3:-26582914 | None:intergenic |
| CTTGACGATCTCTAACGTGG+CGG | 0.741325 | 8.3:-26582911 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAAAAAGGTATATCAAATAT+TGG | - | chr8.3:26583970-26583989 | None:intergenic | 20.0% |
| !!! | TATTTACCCTTTTATTCTAT+TGG | + | chr8.3:26583619-26583638 | MS.gene87437:intron | 20.0% |
| ! | AAGAGAACATAAAAAACATG+AGG | - | chr8.3:26583035-26583054 | None:intergenic | 25.0% |
| ! | AGAGAACATAAAAAACATGA+GGG | - | chr8.3:26583034-26583053 | None:intergenic | 25.0% |
| ! | ATTCATTGTCATTATGATTG+TGG | + | chr8.3:26583332-26583351 | MS.gene87437:intron | 25.0% |
| ! | GAAAAGCCAATAGAATAAAA+GGG | - | chr8.3:26583628-26583647 | None:intergenic | 25.0% |
| ! | TGAAAAGCCAATAGAATAAA+AGG | - | chr8.3:26583629-26583648 | None:intergenic | 25.0% |
| !! | AAAGGTATATCAAATATTGG+AGG | - | chr8.3:26583967-26583986 | None:intergenic | 25.0% |
| !! | ACTTACTTGCTCTAAATTTA+TGG | + | chr8.3:26583284-26583303 | MS.gene87437:intron | 25.0% |
| !! | CTTACTTGCTCTAAATTTAT+GGG | + | chr8.3:26583285-26583304 | MS.gene87437:intron | 25.0% |
| !! | TTGATTTTTATACATATGCC+AGG | + | chr8.3:26583674-26583693 | MS.gene87437:intron | 25.0% |
| !!! | ACAAATTTGTTGGTAATGTA+AGG | + | chr8.3:26583572-26583591 | MS.gene87437:CDS | 25.0% |
| CAACCAAAACAAAAACAATC+TGG | - | chr8.3:26583442-26583461 | None:intergenic | 30.0% | |
| CATGAGGGAAAAGAATAATT+CGG | - | chr8.3:26583019-26583038 | None:intergenic | 30.0% | |
| CATTGTCTTAGAAAAAGAGA+TGG | - | chr8.3:26583191-26583210 | None:intergenic | 30.0% | |
| TCAGCAATGAAATACTTACA+TGG | - | chr8.3:26583162-26583181 | None:intergenic | 30.0% | |
| TTCTCTTTCCTTTATGTGTA+TGG | + | chr8.3:26583048-26583067 | MS.gene87437:intron | 30.0% | |
| ! | ATCAAGTTGTGAAGACTATA+AGG | - | chr8.3:26583659-26583678 | None:intergenic | 30.0% |
| ! | TCAAGTTGTGAAGACTATAA+GGG | - | chr8.3:26583658-26583677 | None:intergenic | 30.0% |
| !! | ATTACCAACAAATTTGTTGC+TGG | - | chr8.3:26583569-26583588 | None:intergenic | 30.0% |
| !!! | AAGCCAGATTGTTTTTGTTT+TGG | + | chr8.3:26583436-26583455 | MS.gene87437:intron | 30.0% |
| AATATTGGAGGTAACGATGT+TGG | - | chr8.3:26583955-26583974 | None:intergenic | 35.0% | |
| ACTGTCGTATATAGAGAACT+TGG | - | chr8.3:26583716-26583735 | None:intergenic | 35.0% | |
| AGAGATGTTTATGAGTGTCA+AGG | - | chr8.3:26584088-26584107 | None:intergenic | 35.0% | |
| ATTACCTGCTTCACTGAAAT+AGG | - | chr8.3:26582967-26582986 | None:intergenic | 35.0% | |
| ATTTCCTATTTCAGTGAAGC+AGG | + | chr8.3:26582960-26582979 | MS.gene87437:CDS | 35.0% | |
| CAAGTTGTGAAGACTATAAG+GGG | - | chr8.3:26583657-26583676 | None:intergenic | 35.0% | |
| CAATTATTTCACCCACTTTC+TGG | + | chr8.3:26582987-26583006 | MS.gene87437:intron | 35.0% | |
| CCAATGAAAGATTCATACCA+TGG | + | chr8.3:26584018-26584037 | MS.gene87437:CDS | 35.0% | |
| CCATGGTATGAATCTTTCAT+TGG | - | chr8.3:26584021-26584040 | None:intergenic | 35.0% | |
| CTTTATGTGTATGGATAACC+CGG | + | chr8.3:26583057-26583076 | MS.gene87437:intron | 35.0% | |
| GAGATGTTTATGAGTGTCAA+GGG | - | chr8.3:26584087-26584106 | None:intergenic | 35.0% | |
| GATTGAACTGCAGTATTATC+TGG | - | chr8.3:26583745-26583764 | None:intergenic | 35.0% | |
| TAGCTGCCAAAAAGATAAGA+AGG | + | chr8.3:26583500-26583519 | MS.gene87437:CDS | 35.0% | |
| TCTACATTCCTGTTGTACTT+AGG | + | chr8.3:26583129-26583148 | MS.gene87437:intron | 35.0% | |
| TGCTAAGGATACGACAAATT+CGG | - | chr8.3:26583527-26583546 | None:intergenic | 35.0% | |
| TGTTCATCCTAATAAAGCAC+TGG | - | chr8.3:26583101-26583120 | None:intergenic | 35.0% | |
| TTAGAATTCAATATCCCGCT+TGG | - | chr8.3:26583778-26583797 | None:intergenic | 35.0% | |
| ! | TTCGGACCTTCTTATCTTTT+TGG | - | chr8.3:26583509-26583528 | None:intergenic | 35.0% |
| !! | ATCCTAATAAAGCACTGGAT+CGG | - | chr8.3:26583096-26583115 | None:intergenic | 35.0% |
| !!! | GGACTTTTTTCTTTAAGTGC+TGG | - | chr8.3:26584000-26584019 | None:intergenic | 35.0% |
| AATCAAATTGTCGACCAAGC+GGG | + | chr8.3:26583761-26583780 | MS.gene87437:CDS | 40.0% | |
| AATGACAGTGATCACCTCAT+AGG | - | chr8.3:26583854-26583873 | None:intergenic | 40.0% | |
| AGAAAAATCGTCTGCTGCTA+AGG | - | chr8.3:26583542-26583561 | None:intergenic | 40.0% | |
| AGTGATCACCTCATAGGAAA+CGG | - | chr8.3:26583848-26583867 | None:intergenic | 40.0% | |
| ATGATGCAGTTGATCTTTCG+TGG | - | chr8.3:26583883-26583902 | None:intergenic | 40.0% | |
| ATTCCTGTTGTACTTAGGCT+TGG | + | chr8.3:26583134-26583153 | MS.gene87437:intron | 40.0% | |
| CAAGCCAGCAACAAATTTGT+TGG | + | chr8.3:26583562-26583581 | MS.gene87437:CDS | 40.0% | |
| CAATCAAATTGTCGACCAAG+CGG | + | chr8.3:26583760-26583779 | MS.gene87437:CDS | 40.0% | |
| CGGGTTATCCATACACATAA+AGG | - | chr8.3:26583059-26583078 | None:intergenic | 40.0% | |
| TGAACTGCAGTATTATCTGG+TGG | - | chr8.3:26583742-26583761 | None:intergenic | 40.0% | |
| TTGTGAAGACTATAAGGGGT+AGG | - | chr8.3:26583653-26583672 | None:intergenic | 40.0% | |
| ! | ATAGAGCTTTGACTCTGTTC+TGG | - | chr8.3:26584060-26584079 | None:intergenic | 40.0% |
| ! | ATCCGATCCAGTGCTTTATT+AGG | + | chr8.3:26583091-26583110 | MS.gene87437:intron | 40.0% |
| ! | ATTCGGATTAGACCAGAAAG+TGG | - | chr8.3:26583002-26583021 | None:intergenic | 40.0% |
| ! | CATATGCCAGGTCCAATTTT+TGG | + | chr8.3:26583686-26583705 | MS.gene87437:intron | 40.0% |
| ! | TTCGGATTAGACCAGAAAGT+GGG | - | chr8.3:26583001-26583020 | None:intergenic | 40.0% |
| !! | GAACTTGGTGCACCAAAAAT+TGG | - | chr8.3:26583701-26583720 | None:intergenic | 40.0% |
| AGACTCCTCAACAATGTGGA+AGG | + | chr8.3:26582932-26582951 | MS.gene87437:CDS | 45.0% | |
| AGTCTTGACGATCTCTAACG+TGG | - | chr8.3:26582917-26582936 | None:intergenic | 45.0% | |
| CACTGGATCGGATAATCACA+GGG | - | chr8.3:26583084-26583103 | None:intergenic | 45.0% | |
| CCCTTCATAAAGAGCTGAGA+CGG | - | chr8.3:26583917-26583936 | None:intergenic | 45.0% | |
| CCGTCTCAGCTCTTTATGAA+GGG | + | chr8.3:26583914-26583933 | MS.gene87437:CDS | 45.0% | |
| CCTTCATAAAGAGCTGAGAC+GGG | - | chr8.3:26583916-26583935 | None:intergenic | 45.0% | |
| CGTCTCAGCTCTTTATGAAG+GGG | + | chr8.3:26583915-26583934 | MS.gene87437:CDS | 45.0% | |
| CTACATGCTGGAACTCTTCT+AGG | - | chr8.3:26583811-26583830 | None:intergenic | 45.0% | |
| GTCAAGACTCCTCAACAATG+TGG | + | chr8.3:26582928-26582947 | MS.gene87437:CDS | 45.0% | |
| GTCTCAGCTCTTTATGAAGG+GGG | + | chr8.3:26583916-26583935 | MS.gene87437:CDS | 45.0% | |
| GTGATCCTTCCACATTGTTG+AGG | - | chr8.3:26582940-26582959 | None:intergenic | 45.0% | |
| TTGATCAACCGATCCAGTGT+CGG | + | chr8.3:26584118-26584137 | MS.gene87437:CDS | 45.0% | |
| !! | AGTGCTGGTGAACGAGAAAA+AGG | - | chr8.3:26583985-26584004 | None:intergenic | 45.0% |
| !! | TCTGTTCTGGTAGCTCTGAT+AGG | - | chr8.3:26584047-26584066 | None:intergenic | 45.0% |
| ATCGGATAATCACAGGGACC+GGG | - | chr8.3:26583078-26583097 | None:intergenic | 50.0% | |
| CCAACAAGATGGCTACATGC+TGG | - | chr8.3:26583823-26583842 | None:intergenic | 50.0% | |
| CCAGCATGTAGCCATCTTGT+TGG | + | chr8.3:26583820-26583839 | MS.gene87437:CDS | 50.0% | |
| CCCGTCTCAGCTCTTTATGA+AGG | + | chr8.3:26583913-26583932 | MS.gene87437:CDS | 50.0% | |
| CTTGACGATCTCTAACGTGG+CGG | - | chr8.3:26582914-26582933 | None:intergenic | 50.0% | |
| GATCGGATAATCACAGGGAC+CGG | - | chr8.3:26583079-26583098 | None:intergenic | 50.0% | |
| GATGCGCCACCACACTAATA+TGG | - | chr8.3:26584161-26584180 | None:intergenic | 50.0% | |
| GCACTGGATCGGATAATCAC+AGG | - | chr8.3:26583085-26583104 | None:intergenic | 50.0% | |
| GCTCCAAGCCTAAGTACAAC+AGG | - | chr8.3:26583140-26583159 | None:intergenic | 50.0% | |
| GGAGGTAACGATGTTGGAGT+CGG | - | chr8.3:26583949-26583968 | None:intergenic | 50.0% | |
| GGTGCACCAAAAATTGGACC+TGG | - | chr8.3:26583695-26583714 | None:intergenic | 50.0% | |
| TGATCAACCGATCCAGTGTC+GGG | + | chr8.3:26584119-26584138 | MS.gene87437:CDS | 50.0% | |
| TGTTGGCACCGTTTCCTATG+AGG | + | chr8.3:26583837-26583856 | MS.gene87437:CDS | 50.0% | |
| ! | AGGAAACGGTGCCAACAAGA+TGG | - | chr8.3:26583834-26583853 | None:intergenic | 50.0% |
| !! | GTAGCTCTGATAGGCTTCCA+TGG | - | chr8.3:26584038-26584057 | None:intergenic | 50.0% |
| CACCACACTAATATGGCCCG+CGG | - | chr8.3:26584154-26584173 | None:intergenic | 55.0% | |
| GATCAACCGATCCAGTGTCG+GGG | + | chr8.3:26584120-26584139 | MS.gene87437:CDS | 55.0% | |
| CATCGTCCCCGACACTGGAT+CGG | - | chr8.3:26584129-26584148 | None:intergenic | 60.0% | |
| CGCGGGCCATATTAGTGTGG+TGG | + | chr8.3:26584152-26584171 | MS.gene87437:CDS | 60.0% | |
| CTCCGCGGGCCATATTAGTG+TGG | + | chr8.3:26584149-26584168 | MS.gene87437:CDS | 60.0% | |
| GTGTCGGGGACGATGCTCCG+CGG | + | chr8.3:26584134-26584153 | MS.gene87437:CDS | 70.0% | |
| TGTCGGGGACGATGCTCCGC+GGG | + | chr8.3:26584135-26584154 | MS.gene87437:CDS | 70.0% | |
| !! | CGGAGCATCGTCCCCGACAC+TGG | - | chr8.3:26584134-26584153 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 26582903 | 26584185 | 26582903 | ID=MS.gene87437 |
| chr8.3 | mRNA | 26582903 | 26584185 | 26582903 | ID=MS.gene87437.t1;Parent=MS.gene87437 |
| chr8.3 | exon | 26582903 | 26582981 | 26582903 | ID=MS.gene87437.t1.exon1;Parent=MS.gene87437.t1 |
| chr8.3 | CDS | 26582903 | 26582981 | 26582903 | ID=cds.MS.gene87437.t1;Parent=MS.gene87437.t1 |
| chr8.3 | exon | 26583473 | 26583593 | 26583473 | ID=MS.gene87437.t1.exon2;Parent=MS.gene87437.t1 |
| chr8.3 | CDS | 26583473 | 26583593 | 26583473 | ID=cds.MS.gene87437.t1;Parent=MS.gene87437.t1 |
| chr8.3 | exon | 26583696 | 26584185 | 26583696 | ID=MS.gene87437.t1.exon3;Parent=MS.gene87437.t1 |
| chr8.3 | CDS | 26583696 | 26584185 | 26583696 | ID=cds.MS.gene87437.t1;Parent=MS.gene87437.t1 |
| Gene Sequence |
| Protein sequence |
