AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene87720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87720.t1 MTR_1g108510 95.604 91 4 0 1 91 1 91 3.06e-59 182
MS.gene87720.t1 MTR_3g030770 95.604 91 4 0 1 91 1 91 3.09e-59 182
MS.gene87720.t1 MTR_2g093190 75.214 117 28 1 1 116 1 117 4.42e-56 174
MS.gene87720.t1 MTR_0121s0100 72.650 117 24 1 1 109 1 117 1.90e-54 167
MS.gene87720.t1 MTR_3g052870 86.813 91 12 0 1 91 1 91 7.81e-54 168
MS.gene87720.t1 MTR_1g105920 86.813 91 12 0 1 91 1 91 3.16e-53 167
MS.gene87720.t1 MTR_1g108580 60.000 145 39 2 1 126 1 145 7.31e-53 166
MS.gene87720.t1 MTR_8g043650 70.940 117 26 1 1 109 1 117 2.08e-52 165
MS.gene87720.t1 MTR_1g105910 85.714 91 13 0 1 91 1 91 6.60e-52 164
MS.gene87720.t1 MTR_2g030740 83.516 91 15 0 1 91 1 91 1.23e-51 163
MS.gene87720.t1 MTR_3g052920 82.418 91 16 0 1 91 1 91 1.45e-50 160
MS.gene87720.t1 MTR_1g106070 81.319 91 17 0 1 91 1 91 5.78e-50 157
MS.gene87720.t1 MTR_1g075600 70.940 117 26 2 1 109 1 117 5.92e-49 156
MS.gene87720.t1 MTR_1g077360 80.220 91 18 0 1 91 1 91 1.29e-48 155
MS.gene87720.t1 MTR_1g012570 80.220 91 18 0 1 91 1 91 2.35e-48 155
MS.gene87720.t1 MTR_3g030780 78.022 91 20 0 1 91 1 91 6.27e-48 150
MS.gene87720.t1 MTR_2g085280 78.022 91 20 0 1 91 1 91 8.04e-48 154
MS.gene87720.t1 MTR_2g085250 78.022 91 20 0 1 91 1 91 8.40e-48 154
MS.gene87720.t1 MTR_0121s0080 80.220 91 18 0 1 91 1 91 1.83e-46 150
MS.gene87720.t1 MTR_5g045560 78.022 91 20 0 1 91 1 91 5.16e-46 149
MS.gene87720.t1 MTR_5g055100 76.923 91 21 0 1 91 1 91 1.80e-45 147
MS.gene87720.t1 MTR_5g053390 75.824 91 22 0 1 91 1 91 1.13e-44 145
MS.gene87720.t1 MTR_1g105905 82.432 74 13 0 18 91 1 74 4.75e-40 133
MS.gene87720.t1 MTR_3g080940 60.440 91 36 0 1 91 1 91 9.06e-36 122
MS.gene87720.t1 MTR_7g062350 58.252 103 41 2 16 116 27 129 8.87e-32 113
MS.gene87720.t1 MTR_8g086290 54.023 87 33 1 4 90 7 86 2.83e-29 104
MS.gene87720.t1 MTR_3g067910 54.167 96 36 1 23 110 4 99 2.83e-29 102
MS.gene87720.t1 MTR_2g105290 54.545 77 35 0 1 77 4 80 3.09e-26 97.1
MS.gene87720.t1 MTR_3g067875 75.000 56 14 0 18 73 1 56 3.15e-26 93.6
MS.gene87720.t1 MTR_1g063160 54.545 77 35 0 9 85 2 78 1.59e-25 95.1
MS.gene87720.t1 MTR_8g079502 57.971 69 29 0 9 77 2 70 2.72e-24 92.0
MS.gene87720.t1 MTR_1g047550 57.971 69 29 0 9 77 2 70 2.77e-24 92.0
MS.gene87720.t1 MTR_1g108500 59.524 84 26 2 23 100 111 192 3.09e-24 95.1
MS.gene87720.t1 MTR_1g054265 53.247 77 36 0 9 85 2 78 4.78e-24 91.3
MS.gene87720.t1 MTR_7g028448 59.740 77 31 0 2 78 5 81 1.17e-23 90.1
MS.gene87720.t1 MTR_4g036915 59.740 77 31 0 2 78 5 81 1.17e-23 90.1
MS.gene87720.t1 MTR_4g131030 53.425 73 34 0 9 81 2 74 8.57e-23 89.0
MS.gene87720.t1 MTR_1g075570 52.000 100 26 3 18 109 1 86 8.52e-22 85.1
MS.gene87720.t1 MTR_8g051580 54.286 70 32 0 9 78 2 71 1.78e-21 84.7
MS.gene87720.t1 MTR_4g094638 44.565 92 51 0 9 100 2 93 2.21e-20 82.0
MS.gene87720.t1 MTR_3g067870 60.317 63 25 0 16 78 83 145 4.51e-20 80.5
MS.gene87720.t1 MTR_8g046350 52.174 69 33 0 9 77 2 70 5.35e-20 80.5
MS.gene87720.t1 MTR_3g005530 51.471 68 33 0 9 76 2 69 9.70e-20 81.3
MS.gene87720.t1 MTR_1g053070 48.148 81 42 0 9 89 2 82 1.71e-19 81.3
MS.gene87720.t1 MTR_4g127140 53.247 77 36 0 1 77 4 80 3.17e-19 79.3
MS.gene87720.t1 MTR_5g066180 50.000 68 34 0 9 76 2 69 1.12e-18 78.6
MS.gene87720.t1 MTR_0003s0590 38.614 101 60 1 9 109 2 100 1.16e-18 79.0
MS.gene87720.t1 MTR_4g093970 54.545 66 30 0 10 75 29 94 1.24e-18 78.6
MS.gene87720.t1 MTR_3g452380 49.333 75 36 1 2 76 12 84 2.00e-18 78.2
MS.gene87720.t1 MTR_4g094632 52.174 69 33 0 9 77 2 70 2.79e-18 75.9
MS.gene87720.t1 MTR_8g033270 48.148 81 38 2 7 85 2 80 3.16e-18 77.8
MS.gene87720.t1 MTR_4g102530 46.575 73 39 0 10 82 3 75 3.94e-18 76.6
MS.gene87720.t1 MTR_5g032520 47.059 68 36 0 9 76 2 69 4.99e-18 77.0
MS.gene87720.t1 MTR_1g101970 50.000 68 34 0 9 76 2 69 6.31e-18 75.9
MS.gene87720.t1 MTR_5g032150 47.059 68 36 0 9 76 2 69 6.96e-18 76.6
MS.gene87720.t1 MTR_4g109830 47.887 71 34 2 7 76 2 70 9.54e-18 76.3
MS.gene87720.t1 MTR_2g017865 49.315 73 35 1 4 76 14 84 2.31e-17 75.9
MS.gene87720.t1 MTR_3g102570 46.341 82 42 2 9 89 2 82 2.55e-17 76.3
MS.gene87720.t1 MTR_8g087860 48.529 68 35 0 9 76 18 85 2.81e-17 75.1
MS.gene87720.t1 MTR_7g075870 49.254 67 34 0 10 76 3 69 2.96e-17 74.7
MS.gene87720.t1 MTR_8g033220 46.154 78 42 0 10 87 3 80 3.97e-17 74.3
MS.gene87720.t1 MTR_6g464720 49.296 71 33 2 7 76 2 70 5.15e-17 74.7
MS.gene87720.t1 MTR_8g033220 49.275 69 35 0 10 78 3 71 5.73e-17 74.3
MS.gene87720.t1 MTR_2g009890 47.059 68 36 0 9 76 2 69 5.85e-17 74.7
MS.gene87720.t1 MTR_5g031000 47.059 68 36 0 9 76 2 69 1.79e-16 72.8
MS.gene87720.t1 MTR_8g066260 46.479 71 35 2 7 76 2 70 1.81e-16 73.2
MS.gene87720.t1 MTR_5g031000 47.059 68 36 0 9 76 2 69 2.11e-16 72.8
MS.gene87720.t1 MTR_2g461710 53.571 56 26 0 9 64 2 57 2.13e-16 68.6
MS.gene87720.t1 MTR_6g015975 49.296 71 33 2 7 76 2 70 2.25e-16 72.8
MS.gene87720.t1 MTR_7g016600 49.296 71 33 2 7 76 2 70 3.23e-16 72.4
MS.gene87720.t1 MTR_7g075870 48.529 68 34 1 10 76 3 70 5.38e-16 71.2
MS.gene87720.t1 MTR_5g046870 46.377 69 36 1 9 76 2 70 6.23e-16 68.9
MS.gene87720.t1 MTR_5g046790 42.029 69 39 1 9 76 2 70 8.90e-16 70.5
MS.gene87720.t1 MTR_1g038300 48.571 70 34 1 9 76 2 71 1.13e-15 70.9
MS.gene87720.t1 MTR_3g088615 44.286 70 37 1 9 76 2 71 1.35e-15 69.7
MS.gene87720.t1 MTR_7g016630 43.662 71 37 2 7 76 2 70 1.73e-15 70.5
MS.gene87720.t1 MTR_8g097090 36.458 96 58 2 9 101 2 97 2.30e-15 70.1
MS.gene87720.t1 MTR_5g021270 48.571 70 34 1 9 76 2 71 2.65e-15 69.7
MS.gene87720.t1 MTR_5g021270 48.571 70 34 1 9 76 2 71 2.66e-15 69.7
MS.gene87720.t1 MTR_3g084980 37.500 96 57 2 9 101 2 97 2.81e-15 69.7
MS.gene87720.t1 MTR_1g029670 42.857 70 38 1 9 76 2 71 4.08e-15 68.2
MS.gene87720.t1 MTR_4g084740 47.222 72 37 1 9 79 2 73 4.73e-15 70.1
MS.gene87720.t1 MTR_8g022970 44.000 75 42 0 8 82 17 91 1.40e-14 67.0
MS.gene87720.t1 MTR_4g109810 50.000 56 28 0 9 64 2 57 2.28e-14 67.4
MS.gene87720.t1 MTR_3g113030 44.286 70 37 1 9 76 2 71 3.09e-14 67.0
MS.gene87720.t1 MTR_5g066960 45.614 57 31 0 9 65 2 58 3.70e-14 62.8
MS.gene87720.t1 MTR_7g075850 47.222 72 34 2 7 76 2 71 4.09e-14 67.0
MS.gene87720.t1 MTR_3g067915 78.125 32 7 0 60 91 30 61 8.79e-14 62.8
MS.gene87720.t1 MTR_4g036050 40.000 70 41 1 9 77 2 71 6.74e-13 62.4
MS.gene87720.t1 MTR_1g041615 58.696 46 19 0 20 65 17 62 7.62e-13 61.2
MS.gene87720.t1 MTR_4g036050 40.000 70 41 1 9 77 2 71 8.05e-13 62.4
MS.gene87720.t1 MTR_4g093030 36.170 94 44 2 9 86 2 95 8.62e-13 61.6
MS.gene87720.t1 MTR_4g036050 40.000 70 41 1 9 77 2 71 9.92e-13 62.0
MS.gene87720.t1 MTR_4g036050 40.000 70 41 1 9 77 2 71 1.07e-12 62.4
MS.gene87720.t1 MTR_4g108720 38.961 77 45 1 9 83 2 78 4.56e-12 62.0
MS.gene87720.t1 MTR_3g437790 36.275 102 53 3 26 115 30 131 1.93e-11 58.5
MS.gene87720.t1 MTR_3g109930 46.429 56 30 0 27 82 20 75 2.58e-11 58.2
MS.gene87720.t1 MTR_4g051538 39.506 81 49 0 1 81 1 81 2.74e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87720.t1 AT5G60440 70.455 88 24 1 5 90 3 90 3.63e-39 133
MS.gene87720.t1 AT4G36590 48.387 124 57 2 8 124 6 129 1.45e-32 115
MS.gene87720.t1 AT1G01530 64.198 81 29 0 5 85 3 83 3.24e-32 114
MS.gene87720.t1 AT1G65360 60.494 81 32 0 5 85 3 83 1.90e-31 111
MS.gene87720.t1 AT2G24840 64.286 70 25 0 9 78 63 132 8.25e-29 105
MS.gene87720.t1 AT2G34440 43.636 110 62 0 9 118 2 111 1.84e-25 94.7
MS.gene87720.t1 AT3G66656 58.824 68 28 0 9 76 2 69 3.06e-23 89.4
MS.gene87720.t1 AT2G45660 51.471 68 33 0 10 77 3 70 2.95e-20 81.3
MS.gene87720.t1 AT4G09960 45.238 84 45 1 9 91 2 85 1.16e-19 80.9
MS.gene87720.t1 AT5G51870 53.731 67 31 0 10 76 3 69 1.19e-19 80.1
MS.gene87720.t1 AT4G09960 45.238 84 45 1 9 91 3 86 1.48e-19 80.9
MS.gene87720.t1 AT2G45660 51.471 68 33 0 10 77 3 70 1.48e-19 80.9
MS.gene87720.t1 AT1G72350 52.055 73 33 1 9 81 43 113 1.51e-19 80.9
MS.gene87720.t1 AT4G09960 45.238 84 45 1 9 91 2 85 1.55e-19 80.9
MS.gene87720.t1 AT5G51870 53.731 67 31 0 10 76 3 69 2.07e-19 80.1
MS.gene87720.t1 AT4G09960 50.000 68 34 0 9 76 12 79 2.12e-19 80.9
MS.gene87720.t1 AT4G09960 45.238 84 45 1 9 91 28 111 2.19e-19 80.9
MS.gene87720.t1 AT5G51870 53.731 67 31 0 10 76 26 92 2.72e-19 79.7
MS.gene87720.t1 AT2G45650 51.471 68 33 0 9 76 2 69 3.03e-19 80.5
MS.gene87720.t1 AT5G51870 53.731 67 31 0 10 76 3 69 3.51e-19 79.7
MS.gene87720.t1 AT5G51870 53.731 67 31 0 10 76 13 79 4.36e-19 79.7
MS.gene87720.t1 AT4G09960 45.238 84 45 1 9 91 97 180 5.17e-19 80.9
MS.gene87720.t1 AT3G57390 51.429 70 32 1 7 76 2 69 7.69e-19 79.0
MS.gene87720.t1 AT2G22540 50.000 68 34 0 9 76 2 69 1.33e-18 78.6
MS.gene87720.t1 AT2G22540 50.000 68 34 0 9 76 2 69 1.33e-18 78.6
MS.gene87720.t1 AT5G13790 52.941 68 32 0 9 76 2 69 1.70e-18 79.0
MS.gene87720.t1 AT3G57390 51.429 70 32 1 7 76 2 69 1.77e-18 78.6
MS.gene87720.t1 AT5G13790 52.941 68 32 0 9 76 2 69 1.80e-18 79.0
MS.gene87720.t1 AT2G42830 49.333 75 36 1 2 76 12 84 2.13e-18 78.2
MS.gene87720.t1 AT2G42830 49.333 75 36 1 2 76 12 84 2.32e-18 78.2
MS.gene87720.t1 AT5G62165 36.082 97 62 0 10 106 3 99 2.44e-18 76.3
MS.gene87720.t1 AT5G62165 36.082 97 62 0 10 106 3 99 2.44e-18 76.3
MS.gene87720.t1 AT5G62165 36.082 97 62 0 10 106 3 99 2.44e-18 76.3
MS.gene87720.t1 AT5G62165 36.082 97 62 0 10 106 3 99 2.70e-18 75.9
MS.gene87720.t1 AT5G62165 36.082 97 62 0 10 106 3 99 2.70e-18 75.9
MS.gene87720.t1 AT5G62165 36.082 97 62 0 10 106 3 99 2.70e-18 75.9
MS.gene87720.t1 AT5G62165 36.082 97 62 0 10 106 3 99 2.70e-18 75.9
MS.gene87720.t1 AT5G62165 36.082 97 62 0 10 106 3 99 2.70e-18 75.9
MS.gene87720.t1 AT3G57230 45.588 68 37 0 9 76 2 69 3.56e-18 75.5
MS.gene87720.t1 AT4G24540 50.000 68 34 0 9 76 2 69 4.06e-18 77.0
MS.gene87720.t1 AT4G18960 45.122 82 43 1 4 85 15 94 4.55e-18 77.4
MS.gene87720.t1 AT5G62165 49.254 67 34 0 10 76 3 69 5.04e-18 73.9
MS.gene87720.t1 AT3G04100 45.000 80 39 1 1 75 1 80 5.08e-18 76.6
MS.gene87720.t1 AT3G58780 49.333 75 36 1 2 76 12 84 5.52e-18 77.0
MS.gene87720.t1 AT3G58780 49.333 75 36 1 2 76 18 90 6.01e-18 77.0
MS.gene87720.t1 AT4G22950 50.746 67 33 0 10 76 3 69 6.23e-18 75.5
MS.gene87720.t1 AT3G58780 49.333 75 36 1 2 76 12 84 6.43e-18 77.4
MS.gene87720.t1 AT1G29962 45.946 74 40 0 5 78 4 77 1.10e-17 75.1
MS.gene87720.t1 AT5G10140 50.725 69 33 1 9 76 2 70 1.37e-17 74.3
MS.gene87720.t1 AT5G62165 36.082 97 62 0 10 106 3 99 1.64e-17 75.1
MS.gene87720.t1 AT5G62165 36.082 97 62 0 10 106 3 99 1.64e-17 75.1
MS.gene87720.t1 AT4G37940 47.059 68 36 0 9 76 2 69 1.79e-17 74.3
MS.gene87720.t1 AT5G62165 36.082 97 62 0 10 106 3 99 1.81e-17 75.1
MS.gene87720.t1 AT5G62165 36.082 97 62 0 10 106 3 99 1.81e-17 75.1
MS.gene87720.t1 AT5G62165 36.082 97 62 0 10 106 3 99 1.81e-17 75.1
MS.gene87720.t1 AT5G10140 50.725 69 33 1 9 76 2 70 1.99e-17 74.7
MS.gene87720.t1 AT4G37940 47.059 68 36 0 9 76 2 69 2.39e-17 75.1
MS.gene87720.t1 AT4G37940 47.059 68 36 0 9 76 2 69 2.57e-17 74.7
MS.gene87720.t1 AT4G22950 50.746 67 33 0 10 76 3 69 2.60e-17 74.7
MS.gene87720.t1 AT4G22950 50.746 67 33 0 10 76 3 69 2.60e-17 74.7
MS.gene87720.t1 AT5G51860 50.746 67 33 0 10 76 3 69 2.92e-17 74.3
MS.gene87720.t1 AT5G10140 50.725 69 33 1 9 76 2 70 2.93e-17 73.9
MS.gene87720.t1 AT1G28460 45.946 74 40 0 5 78 4 77 3.19e-17 73.9
MS.gene87720.t1 AT3G57230 45.588 68 37 0 9 76 2 69 3.72e-17 74.7
MS.gene87720.t1 AT3G57230 45.588 68 37 0 9 76 2 69 3.72e-17 74.7
MS.gene87720.t1 AT5G10140 50.725 69 33 1 9 76 2 70 3.75e-17 73.9
MS.gene87720.t1 AT5G51860 50.746 67 33 0 10 76 3 69 3.81e-17 74.3
MS.gene87720.t1 AT5G20240 46.575 73 37 1 9 79 2 74 4.24e-17 72.8
MS.gene87720.t1 AT5G20240 46.575 73 37 1 9 79 2 74 6.95e-17 73.6
MS.gene87720.t1 AT1G69120 47.887 71 34 2 7 76 2 70 7.31e-17 73.9
MS.gene87720.t1 AT1G26310 47.887 71 34 2 7 76 2 70 8.64e-17 73.9
MS.gene87720.t1 AT3G30260 44.928 69 37 1 9 76 2 70 1.31e-16 73.6
MS.gene87720.t1 AT5G60910 47.887 71 34 2 7 76 2 70 2.14e-16 72.8
MS.gene87720.t1 AT1G69120 47.887 71 34 2 7 76 2 70 2.34e-16 73.2
MS.gene87720.t1 AT2G22540 48.529 68 30 1 9 76 2 64 3.04e-16 72.4
MS.gene87720.t1 AT5G23260 44.086 93 46 2 4 90 13 105 3.64e-16 72.8
MS.gene87720.t1 AT5G23260 44.086 93 46 2 4 90 13 105 3.73e-16 72.4
MS.gene87720.t1 AT4G11880 48.529 68 34 1 10 76 3 70 3.78e-16 70.9
MS.gene87720.t1 AT4G11880 48.529 68 34 1 10 76 3 70 3.78e-16 70.9
MS.gene87720.t1 AT3G61120 47.059 68 36 0 9 76 2 69 5.43e-16 72.0
MS.gene87720.t1 AT3G58780 52.308 65 29 1 2 66 12 74 6.84e-16 71.6
MS.gene87720.t1 AT5G15800 49.296 71 33 2 7 76 2 70 6.94e-16 71.6
MS.gene87720.t1 AT2G14210 41.558 77 44 1 9 84 2 78 7.18e-16 71.2
MS.gene87720.t1 AT3G58780 52.308 65 29 1 2 66 12 74 8.06e-16 71.6
MS.gene87720.t1 AT2G14210 41.558 77 44 1 9 84 2 78 9.07e-16 71.2
MS.gene87720.t1 AT5G65050 34.884 129 69 4 9 122 2 130 9.27e-16 70.1
MS.gene87720.t1 AT4G11880 48.529 68 34 1 10 76 3 70 9.61e-16 70.9
MS.gene87720.t1 AT4G11880 48.529 68 34 1 10 76 3 70 9.61e-16 70.9
MS.gene87720.t1 AT5G15800 47.826 69 35 1 9 76 2 70 1.15e-15 71.2
MS.gene87720.t1 AT5G23260 45.455 88 42 2 9 90 2 89 1.22e-15 70.9
MS.gene87720.t1 AT5G23260 45.455 88 42 2 9 90 2 89 1.25e-15 70.9
MS.gene87720.t1 AT1G77980 50.000 72 35 1 9 79 2 73 1.45e-15 71.6
MS.gene87720.t1 AT1G77950 47.222 72 37 1 9 79 2 73 1.46e-15 70.9
MS.gene87720.t1 AT1G77950 47.222 72 37 1 9 79 2 73 1.46e-15 70.9
MS.gene87720.t1 AT1G77950 47.222 72 37 1 9 79 2 73 1.46e-15 70.9
MS.gene87720.t1 AT1G77950 47.222 72 37 1 9 79 2 73 1.46e-15 70.9
MS.gene87720.t1 AT5G65050 46.377 69 36 1 9 76 2 70 2.09e-15 68.9
MS.gene87720.t1 AT3G54340 43.836 73 39 1 9 79 2 74 2.68e-15 69.7
MS.gene87720.t1 AT2G03710 53.571 56 26 0 9 64 2 57 3.04e-15 68.9
MS.gene87720.t1 AT3G02310 46.377 69 36 1 9 76 2 70 3.05e-15 68.9
MS.gene87720.t1 AT5G65050 46.377 69 36 1 9 76 2 70 3.47e-15 68.6
MS.gene87720.t1 AT1G17310 54.054 74 32 1 8 81 47 118 3.56e-15 69.3
MS.gene87720.t1 AT1G22130 48.611 72 36 1 9 79 2 73 3.65e-15 70.5
MS.gene87720.t1 AT1G17310 51.899 79 36 1 8 86 58 134 3.96e-15 69.3
MS.gene87720.t1 AT5G65050 46.377 69 36 1 9 76 2 70 4.04e-15 68.6
MS.gene87720.t1 AT5G65060 46.377 69 36 1 9 76 2 70 4.98e-15 68.2
MS.gene87720.t1 AT5G65060 46.377 69 36 1 9 76 2 70 6.22e-15 68.2
MS.gene87720.t1 AT5G65060 46.377 69 36 1 9 76 2 70 8.18e-15 67.8
MS.gene87720.t1 AT1G71692 44.286 70 38 1 9 77 2 71 1.08e-14 67.8
MS.gene87720.t1 AT1G24260 51.786 56 27 0 9 64 2 57 1.49e-14 68.2
MS.gene87720.t1 AT1G24260 51.786 56 27 0 9 64 2 57 1.50e-14 68.2
MS.gene87720.t1 AT1G24260 51.786 56 27 0 9 64 2 57 1.55e-14 67.8
MS.gene87720.t1 AT1G28450 40.541 74 44 0 5 78 4 77 1.56e-14 67.0
MS.gene87720.t1 AT3G02310 46.377 69 36 1 9 76 2 70 1.58e-14 68.2
MS.gene87720.t1 AT2G22630 42.647 68 39 0 9 76 2 69 2.06e-14 67.4
MS.gene87720.t1 AT2G22630 42.647 68 39 0 9 76 2 69 2.06e-14 67.4
MS.gene87720.t1 AT2G03710 47.143 70 35 2 9 76 2 71 2.23e-14 67.8
MS.gene87720.t1 AT2G03710 47.143 70 35 2 9 76 2 71 2.30e-14 67.8
MS.gene87720.t1 AT1G47760 40.299 67 40 0 9 75 2 68 3.14e-14 66.2
MS.gene87720.t1 AT5G65070 39.130 69 41 1 9 76 2 70 7.62e-14 64.3
MS.gene87720.t1 AT1G18750 37.662 77 46 1 9 83 2 78 1.46e-13 66.2
MS.gene87720.t1 AT1G18750 37.662 77 46 1 9 83 2 78 1.51e-13 66.2
MS.gene87720.t1 AT5G65070 39.130 69 41 1 9 76 2 70 2.68e-13 63.9
MS.gene87720.t1 AT5G65070 39.130 69 41 1 9 76 2 70 3.44e-13 63.9
MS.gene87720.t1 AT1G18750 37.662 77 46 1 9 83 2 78 4.78e-13 64.7
MS.gene87720.t1 AT5G65070 39.130 69 41 1 9 76 2 70 4.82e-13 63.9
MS.gene87720.t1 AT5G65070 43.860 57 32 0 9 65 2 58 2.12e-12 62.0
MS.gene87720.t1 AT4G37435 39.437 71 42 1 9 78 2 72 2.87e-12 60.8
MS.gene87720.t1 AT1G69540 40.789 76 44 1 9 83 2 77 4.89e-12 62.0
MS.gene87720.t1 AT1G69540 40.789 76 44 1 9 83 2 77 5.12e-12 62.0
MS.gene87720.t1 AT5G49490 37.500 88 48 2 5 85 41 128 7.47e-12 60.8
MS.gene87720.t1 AT5G65080 36.364 77 48 1 1 76 1 77 1.04e-11 59.7
MS.gene87720.t1 AT5G65080 39.683 63 38 0 1 63 1 63 1.34e-11 59.3
MS.gene87720.t1 AT5G49420 36.170 94 53 2 5 91 3 96 1.42e-11 60.5
MS.gene87720.t1 AT2G03060 37.662 77 46 1 9 83 2 78 2.88e-11 59.7
MS.gene87720.t1 AT1G46408 42.500 80 42 2 7 82 2 81 3.58e-11 58.9
MS.gene87720.t1 AT2G03060 37.662 77 46 1 9 83 2 78 3.66e-11 59.3
MS.gene87720.t1 AT2G03060 37.662 77 46 1 9 83 2 78 3.66e-11 59.3
MS.gene87720.t1 AT2G03060 37.662 77 46 1 9 83 2 78 3.66e-11 59.3
MS.gene87720.t1 AT1G60920 37.037 81 46 1 7 82 2 82 7.60e-11 57.4
MS.gene87720.t1 AT2G26320 36.364 77 47 1 5 79 14 90 8.59e-11 55.5

Find 28 sgRNAs with CRISPR-Local

Find 34 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTGGGCTTGTCCGGTTGA+TGG 0.330339 7.1:-29282512 MS.gene87720:CDS
GCTTTGAGAAAGTCACTTGC+AGG 0.373101 7.1:+29282806 None:intergenic
CAACAACACGCTCAAGGAAA+TGG 0.388516 7.1:-29282546 MS.gene87720:CDS
GTCTATGACCGTATCAAGAT+TGG 0.398383 7.1:+29282675 None:intergenic
AGTGAGCTTTGCACCCTTTG+TGG 0.435393 7.1:-29282757 MS.gene87720:CDS
GGTGGGCTTGTCCGGTTGAT+GGG 0.441656 7.1:-29282511 MS.gene87720:CDS
TCTATGACCGTATCAAGATT+GGG 0.446553 7.1:+29282676 None:intergenic
GCCTTTCTTTCTGCTCGACA+TGG 0.460288 7.1:+29282876 None:intergenic
CATAGACCGCTATCTTTCTC+TGG 0.460785 7.1:-29282659 MS.gene87720:CDS
TCCCTATTCATCCCATCAAC+CGG 0.481029 7.1:+29282500 None:intergenic
AGCAGCATCTGCACCACAAA+GGG 0.492573 7.1:+29282744 None:intergenic
GCCATGTCGAGCAGAAAGAA+AGG 0.543058 7.1:-29282877 MS.gene87720:CDS
TGGTCACCCCAATCTTGATA+CGG 0.553864 7.1:-29282683 MS.gene87720:CDS
CTCGTTGTATTCTCACCTAG+TGG 0.580084 7.1:-29282721 MS.gene87720:CDS
ATCAAGATTGGGGTGACCAA+AGG 0.581678 7.1:+29282687 None:intergenic
TCGAGCAGAAAGAAAGGCCG+AGG 0.584906 7.1:-29282871 MS.gene87720:CDS
TCAAATCAACAACACGCTCA+AGG 0.593684 7.1:-29282552 MS.gene87720:CDS
GCACCATGCAACTCATATTG+AGG 0.594573 7.1:-29282618 MS.gene87720:CDS
AGCATTGAGTTCACGAACGT+TGG 0.603238 7.1:+29282583 None:intergenic
TGTATTCTCACCTAGTGGAA+AGG 0.611194 7.1:-29282716 MS.gene87720:CDS
AAGGAAAATACCTTTCCACT+AGG 0.624124 7.1:+29282706 None:intergenic
ACTTTCTCAAAGCGTCGTAG+CGG 0.625617 7.1:-29282796 MS.gene87720:CDS
GAGCAGCATCTGCACCACAA+AGG 0.629318 7.1:+29282743 None:intergenic
CAACACGCTCAAGGAAATGG+AGG 0.632817 7.1:-29282543 MS.gene87720:CDS
CTATGACCGTATCAAGATTG+GGG 0.641126 7.1:+29282677 None:intergenic
GAGCCTCAATATGAGTTGCA+TGG 0.697522 7.1:+29282615 None:intergenic
GTGGTACCAGAGAAAGATAG+CGG 0.703250 7.1:+29282653 None:intergenic
CTGGTACCACCACAAAACAA+CGG 0.718153 7.1:-29282640 MS.gene87720:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCTTTTTCATCTCGATCTTT+TGG + chr7.1:29282539-29282558 None:intergenic 30.0%
AAGGAAAATACCTTTCCACT+AGG + chr7.1:29282678-29282697 None:intergenic 35.0%
TCTATGACCGTATCAAGATT+GGG + chr7.1:29282708-29282727 None:intergenic 35.0%
! AGGAAATGGAGGCTAATTTT+TGG - chr7.1:29282849-29282868 MS.gene87720:CDS 35.0%
!! AAATGGAGGCTAATTTTTGG+TGG - chr7.1:29282852-29282871 MS.gene87720:CDS 35.0%
!!! AATGGAGGCTAATTTTTGGT+GGG - chr7.1:29282853-29282872 MS.gene87720:CDS 35.0%
!!! AGTGGAAAGGTATTTTCCTT+TGG - chr7.1:29282678-29282697 MS.gene87720:CDS 35.0%
CTATGACCGTATCAAGATTG+GGG + chr7.1:29282707-29282726 None:intergenic 40.0%
GTCTATGACCGTATCAAGAT+TGG + chr7.1:29282709-29282728 None:intergenic 40.0%
TCAAATCAACAACACGCTCA+AGG - chr7.1:29282829-29282848 MS.gene87720:CDS 40.0%
TGTATTCTCACCTAGTGGAA+AGG - chr7.1:29282665-29282684 MS.gene87720:CDS 40.0%
!!! TAATTTTTGGTGGGCTTGTC+CGG - chr7.1:29282862-29282881 MS.gene87720:CDS 40.0%
ATCAAGATTGGGGTGACCAA+AGG + chr7.1:29282697-29282716 None:intergenic 45.0%
CAACAACACGCTCAAGGAAA+TGG - chr7.1:29282835-29282854 MS.gene87720:CDS 45.0%
CATAGACCGCTATCTTTCTC+TGG - chr7.1:29282722-29282741 MS.gene87720:CDS 45.0%
CTCGTTGTATTCTCACCTAG+TGG - chr7.1:29282660-29282679 MS.gene87720:CDS 45.0%
CTGGTACCACCACAAAACAA+CGG - chr7.1:29282741-29282760 MS.gene87720:CDS 45.0%
GAGCCTCAATATGAGTTGCA+TGG + chr7.1:29282769-29282788 None:intergenic 45.0%
GCACCATGCAACTCATATTG+AGG - chr7.1:29282763-29282782 MS.gene87720:CDS 45.0%
GTGGTACCAGAGAAAGATAG+CGG + chr7.1:29282731-29282750 None:intergenic 45.0%
TGGTCACCCCAATCTTGATA+CGG - chr7.1:29282698-29282717 MS.gene87720:CDS 45.0%
! AGCATTGAGTTCACGAACGT+TGG + chr7.1:29282801-29282820 None:intergenic 45.0%
!! ACTTTCTCAAAGCGTCGTAG+CGG - chr7.1:29282585-29282604 MS.gene87720:CDS 45.0%
!! GCTTTGAGAAAGTCACTTGC+AGG + chr7.1:29282578-29282597 None:intergenic 45.0%
AGCAGCATCTGCACCACAAA+GGG + chr7.1:29282640-29282659 None:intergenic 50.0%
AGTGAGCTTTGCACCCTTTG+TGG - chr7.1:29282624-29282643 MS.gene87720:CDS 50.0%
CAACACGCTCAAGGAAATGG+AGG - chr7.1:29282838-29282857 MS.gene87720:CDS 50.0%
! TCTCGATCTTTTGGCGACCT+CGG + chr7.1:29282530-29282549 None:intergenic 50.0%
!!! ATGGTGCCGTTGTTTTGTGG+TGG + chr7.1:29282750-29282769 None:intergenic 50.0%
!!! TGCATGGTGCCGTTGTTTTG+TGG + chr7.1:29282753-29282772 None:intergenic 50.0%
GAGCAGCATCTGCACCACAA+AGG + chr7.1:29282641-29282660 None:intergenic 55.0%
TCGAGCAGAAAGAAAGGCCG+AGG - chr7.1:29282510-29282529 MS.gene87720:CDS 55.0%
! GGTGGGCTTGTCCGGTTGAT+GGG - chr7.1:29282870-29282889 MS.gene87720:CDS 60.0%
!! TGGTGGGCTTGTCCGGTTGA+TGG - chr7.1:29282869-29282888 MS.gene87720:CDS 60.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 29282507 29282896 29282507 ID=MS.gene87720
chr7.1 mRNA 29282507 29282896 29282507 ID=MS.gene87720.t1;Parent=MS.gene87720
chr7.1 exon 29282507 29282896 29282507 ID=MS.gene87720.t1.exon1;Parent=MS.gene87720.t1
chr7.1 CDS 29282507 29282896 29282507 ID=cds.MS.gene87720.t1;Parent=MS.gene87720.t1
Gene Sequence

>MS.gene87720

ATGTCGAGCAGAAAGAAAGGCCGAGGTCGCCAAAAGATCGAGATGAAAAAGATGAGCAACGACAACAACCTGCAAGTGACTTTCTCAAAGCGTCGTAGCGGACTCTTCAAGAAATCAAGTGAGCTTTGCACCCTTTGTGGTGCAGATGCTGCTCTCGTTGTATTCTCACCTAGTGGAAAGGTATTTTCCTTTGGTCACCCCAATCTTGATACGGTCATAGACCGCTATCTTTCTCTGGTACCACCACAAAACAACGGCACCATGCAACTCATATTGAGGCTCACTGCAATGCCAACGTTCGTGAACTCAATGCTCAGCTTACTCAAATCAACAACACGCTCAAGGAAATGGAGGCTAATTTTTGGTGGGCTTGTCCGGTTGATGGGATGA
Protein sequence

>MS.gene87720.t1

MSSRKKGRGRQKIEMKKMSNDNNLQVTFSKRRSGLFKKSSELCTLCGADAALVVFSPSGKVFSFGHPNLDTVIDRYLSLVPPQNNGTMQLILRLTAMPTFVNSMLSLLKSTTRSRKWRLIFGGLVRLMG