Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87723.t1 | KEH23271.1 | 85.3 | 129 | 19 | 0 | 1 | 129 | 1 | 129 | 6.90E-56 | 227.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87723.t1 | Q39950 | 44.8 | 116 | 60 | 2 | 3 | 118 | 2 | 113 | 7.5e-19 | 95.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87723.t1 | A0A072U1F4 | 85.3 | 129 | 19 | 0 | 1 | 129 | 1 | 129 | 5.0e-56 | 227.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene87723.t1 | TF | MADS-M-type |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87723.t1 | MTR_7g072993 | 85.271 | 129 | 19 | 0 | 1 | 129 | 1 | 129 | 1.71e-66 | 203 |
| MS.gene87723.t1 | MTR_7g072900 | 76.271 | 118 | 26 | 1 | 1 | 118 | 1 | 116 | 5.32e-59 | 184 |
| MS.gene87723.t1 | MTR_7g073130 | 75.630 | 119 | 26 | 2 | 1 | 119 | 1 | 116 | 2.60e-56 | 177 |
| MS.gene87723.t1 | MTR_7g072980 | 66.667 | 138 | 45 | 1 | 1 | 138 | 1 | 137 | 1.48e-55 | 176 |
| MS.gene87723.t1 | MTR_1g040335 | 79.661 | 118 | 22 | 2 | 1 | 118 | 1 | 116 | 1.41e-54 | 172 |
| MS.gene87723.t1 | MTR_7g073100 | 58.915 | 129 | 51 | 1 | 1 | 129 | 1 | 127 | 1.22e-43 | 145 |
| MS.gene87723.t1 | MTR_1g040330 | 68.908 | 119 | 35 | 2 | 1 | 119 | 1 | 117 | 2.53e-42 | 141 |
| MS.gene87723.t1 | MTR_7g073120 | 56.154 | 130 | 55 | 2 | 1 | 129 | 1 | 129 | 1.49e-41 | 140 |
| MS.gene87723.t1 | MTR_7g072930 | 55.085 | 118 | 51 | 1 | 1 | 118 | 1 | 116 | 8.33e-40 | 135 |
| MS.gene87723.t1 | MTR_7g073030 | 52.713 | 129 | 59 | 1 | 1 | 129 | 1 | 127 | 1.71e-38 | 132 |
| MS.gene87723.t1 | MTR_7g073150 | 50.781 | 128 | 61 | 1 | 1 | 128 | 1 | 126 | 2.02e-38 | 132 |
| MS.gene87723.t1 | MTR_7g073060 | 58.824 | 119 | 47 | 1 | 1 | 119 | 1 | 117 | 3.11e-38 | 130 |
| MS.gene87723.t1 | MTR_7g073170 | 53.390 | 118 | 52 | 2 | 1 | 118 | 1 | 115 | 2.67e-36 | 125 |
| MS.gene87723.t1 | MTR_7g072830 | 49.153 | 118 | 59 | 1 | 1 | 118 | 1 | 117 | 1.18e-32 | 116 |
| MS.gene87723.t1 | MTR_7g072730 | 49.153 | 118 | 59 | 1 | 1 | 118 | 1 | 117 | 4.35e-30 | 111 |
| MS.gene87723.t1 | MTR_7g072960 | 41.781 | 146 | 69 | 2 | 1 | 146 | 1 | 130 | 1.80e-28 | 106 |
| MS.gene87723.t1 | MTR_7g072810 | 49.219 | 128 | 58 | 2 | 1 | 128 | 1 | 121 | 3.94e-28 | 105 |
| MS.gene87723.t1 | MTR_4g028190 | 46.281 | 121 | 61 | 3 | 1 | 119 | 1 | 119 | 3.83e-27 | 102 |
| MS.gene87723.t1 | MTR_7g072760 | 47.107 | 121 | 61 | 2 | 1 | 119 | 1 | 120 | 3.52e-23 | 92.0 |
| MS.gene87723.t1 | MTR_4g028180 | 41.322 | 121 | 65 | 3 | 3 | 118 | 4 | 123 | 7.00e-22 | 88.6 |
| MS.gene87723.t1 | MTR_8g043650 | 56.000 | 75 | 26 | 2 | 158 | 231 | 169 | 237 | 1.43e-18 | 82.8 |
| MS.gene87723.t1 | MTR_4g027840 | 39.831 | 118 | 66 | 4 | 8 | 124 | 5 | 118 | 1.70e-18 | 80.1 |
| MS.gene87723.t1 | MTR_4g027800 | 41.071 | 112 | 61 | 4 | 8 | 118 | 5 | 112 | 2.35e-18 | 79.0 |
| MS.gene87723.t1 | MTR_4g428370 | 41.071 | 112 | 61 | 3 | 8 | 118 | 62 | 169 | 6.97e-18 | 79.3 |
| MS.gene87723.t1 | MTR_1g105905 | 52.000 | 75 | 29 | 2 | 158 | 231 | 152 | 220 | 6.31e-16 | 75.1 |
| MS.gene87723.t1 | MTR_4g029210 | 34.513 | 113 | 71 | 2 | 8 | 120 | 5 | 114 | 9.36e-16 | 72.0 |
| MS.gene87723.t1 | MTR_1g075600 | 57.143 | 63 | 21 | 1 | 158 | 220 | 169 | 225 | 2.08e-15 | 73.9 |
| MS.gene87723.t1 | MTR_1g077360 | 57.143 | 63 | 21 | 1 | 158 | 220 | 169 | 225 | 3.10e-15 | 73.6 |
| MS.gene87723.t1 | MTR_2g085250 | 55.224 | 67 | 23 | 2 | 162 | 227 | 173 | 233 | 4.10e-15 | 73.2 |
| MS.gene87723.t1 | MTR_1g105920 | 63.158 | 57 | 15 | 1 | 158 | 214 | 169 | 219 | 5.05e-15 | 73.2 |
| MS.gene87723.t1 | MTR_2g085280 | 53.731 | 67 | 24 | 2 | 162 | 227 | 173 | 233 | 5.92e-15 | 72.8 |
| MS.gene87723.t1 | MTR_4g029350 | 36.975 | 119 | 70 | 3 | 1 | 119 | 1 | 114 | 2.96e-14 | 68.2 |
| MS.gene87723.t1 | MTR_0121s0080 | 51.515 | 66 | 26 | 1 | 162 | 227 | 173 | 232 | 1.07e-13 | 69.3 |
| MS.gene87723.t1 | MTR_5g055100 | 49.296 | 71 | 29 | 2 | 162 | 231 | 173 | 237 | 1.09e-13 | 69.3 |
| MS.gene87723.t1 | MTR_7g062350 | 54.545 | 66 | 24 | 1 | 162 | 227 | 185 | 244 | 1.13e-13 | 69.3 |
| MS.gene87723.t1 | MTR_2g030740 | 59.649 | 57 | 17 | 1 | 158 | 214 | 169 | 219 | 1.54e-13 | 68.9 |
| MS.gene87723.t1 | MTR_5g045560 | 55.932 | 59 | 20 | 1 | 162 | 220 | 173 | 225 | 1.65e-13 | 68.9 |
| MS.gene87723.t1 | MTR_4g029390 | 36.792 | 106 | 64 | 2 | 13 | 118 | 11 | 113 | 7.21e-13 | 64.3 |
| MS.gene87723.t1 | MTR_1g105910 | 50.794 | 63 | 25 | 1 | 158 | 220 | 169 | 225 | 1.27e-12 | 66.2 |
| MS.gene87723.t1 | MTR_3g052870 | 56.140 | 57 | 19 | 1 | 158 | 214 | 150 | 200 | 1.29e-12 | 65.9 |
| MS.gene87723.t1 | MTR_3g030770 | 55.224 | 67 | 22 | 2 | 151 | 215 | 154 | 214 | 1.39e-12 | 65.9 |
| MS.gene87723.t1 | MTR_2g062600 | 33.019 | 106 | 68 | 2 | 13 | 118 | 10 | 112 | 6.10e-12 | 61.6 |
| MS.gene87723.t1 | MTR_1g012570 | 54.386 | 57 | 20 | 1 | 158 | 214 | 169 | 219 | 7.00e-12 | 64.3 |
| MS.gene87723.t1 | MTR_7g072987 | 50.820 | 61 | 28 | 1 | 39 | 99 | 68 | 126 | 1.39e-11 | 62.0 |
| MS.gene87723.t1 | MTR_1g108510 | 53.731 | 67 | 23 | 2 | 151 | 215 | 154 | 214 | 1.77e-11 | 62.8 |
| MS.gene87723.t1 | MTR_5g053390 | 52.542 | 59 | 22 | 1 | 162 | 220 | 173 | 225 | 2.69e-11 | 62.4 |
| MS.gene87723.t1 | MTR_3g056640 | 30.894 | 123 | 77 | 3 | 5 | 121 | 2 | 122 | 6.46e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87723.t1 | AT2G38540 | 39.496 | 119 | 65 | 5 | 1 | 117 | 1 | 114 | 6.57e-17 | 75.5 |
| MS.gene87723.t1 | AT4G33355 | 37.500 | 112 | 67 | 1 | 7 | 118 | 8 | 116 | 9.57e-17 | 74.7 |
| MS.gene87723.t1 | AT4G33355 | 37.500 | 112 | 67 | 1 | 7 | 118 | 8 | 116 | 1.30e-16 | 74.3 |
| MS.gene87723.t1 | AT3G51590 | 41.441 | 111 | 61 | 2 | 9 | 119 | 8 | 114 | 1.48e-16 | 74.3 |
| MS.gene87723.t1 | AT5G59320 | 41.441 | 111 | 58 | 4 | 10 | 119 | 9 | 113 | 3.17e-16 | 73.6 |
| MS.gene87723.t1 | AT2G38530 | 37.168 | 113 | 66 | 4 | 8 | 118 | 6 | 115 | 1.65e-15 | 71.6 |
| MS.gene87723.t1 | AT2G15050 | 40.187 | 107 | 59 | 4 | 6 | 109 | 4 | 108 | 1.80e-15 | 71.2 |
| MS.gene87723.t1 | AT2G15050 | 40.187 | 107 | 59 | 4 | 6 | 109 | 4 | 108 | 2.10e-15 | 71.2 |
| MS.gene87723.t1 | AT2G15050 | 40.187 | 107 | 59 | 4 | 6 | 109 | 4 | 108 | 2.87e-15 | 70.9 |
| MS.gene87723.t1 | AT5G01870 | 35.714 | 98 | 58 | 2 | 24 | 119 | 20 | 114 | 9.53e-15 | 69.3 |
| MS.gene87723.t1 | AT3G08770 | 40.000 | 100 | 55 | 2 | 25 | 122 | 18 | 114 | 1.52e-14 | 68.9 |
| MS.gene87723.t1 | AT3G08770 | 40.206 | 97 | 53 | 2 | 25 | 119 | 18 | 111 | 5.18e-14 | 67.4 |
| MS.gene87723.t1 | AT3G51600 | 32.174 | 115 | 73 | 3 | 6 | 118 | 4 | 115 | 7.73e-12 | 61.6 |
| MS.gene87723.t1 | AT5G59310 | 37.895 | 95 | 53 | 3 | 25 | 119 | 22 | 110 | 1.80e-11 | 60.5 |
| MS.gene87723.t1 | AT2G18370 | 36.283 | 113 | 64 | 4 | 11 | 119 | 6 | 114 | 5.08e-11 | 59.3 |
Find 75 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAACAAATTGAGTTGTTTA+TGG | 0.183547 | 7.1:+29292061 | None:intergenic |
| GAAATTGTGATAGAAATATT+TGG | 0.186830 | 7.1:+29292201 | None:intergenic |
| GGCTATGATATGCTTGGTTT+TGG | 0.218231 | 7.1:-29294530 | MS.gene87723:CDS |
| TCGACGATCTTGGGGAGTTT+TGG | 0.263906 | 7.1:+29294363 | None:intergenic |
| GCTAAAGTTTGTTGCACTTC+AGG | 0.278040 | 7.1:+29294475 | None:intergenic |
| ATGTCAACACCACAGTCTTT+AGG | 0.283593 | 7.1:+29294268 | None:intergenic |
| ACCGCATTGCAACATGGTTC+AGG | 0.289771 | 7.1:+29294406 | None:intergenic |
| GCAAACATCTCGACGATCTT+GGG | 0.310329 | 7.1:+29294354 | None:intergenic |
| TGTCAACACCACAGTCTTTA+GGG | 0.317231 | 7.1:+29294269 | None:intergenic |
| CGCAAACATCTCGACGATCT+TGG | 0.319102 | 7.1:+29294353 | None:intergenic |
| GATATAGGAGGACGAGGATA+TGG | 0.332505 | 7.1:-29292137 | MS.gene87723:CDS |
| AAATTGTGATAGAAATATTT+GGG | 0.347782 | 7.1:+29292202 | None:intergenic |
| ATTTGGGCTTGTTGAAGATT+TGG | 0.348426 | 7.1:+29292218 | None:intergenic |
| GCTTACCAAGGTTACTTGTT+TGG | 0.349327 | 7.1:-29294551 | MS.gene87723:CDS |
| TACTTGCTGCAGTCCATGTC+AGG | 0.352769 | 7.1:+29294229 | None:intergenic |
| TTGTTTGTCTTCAATGATAT+AGG | 0.371157 | 7.1:-29292152 | MS.gene87723:CDS |
| AGAGGGGAGAGGGATGTTAG+AGG | 0.374777 | 7.1:+29292262 | None:intergenic |
| TCGATGATGGGCGGCATACC+TGG | 0.388848 | 7.1:-29294319 | MS.gene87723:CDS |
| AGGACACGAAGGGGCAGAAT+TGG | 0.395503 | 7.1:+29294495 | None:intergenic |
| ATGATGGAGAGGGATGTTAG+AGG | 0.405190 | 7.1:+29292244 | None:intergenic |
| CGGTTGCCTCAAATCGATGA+TGG | 0.452362 | 7.1:-29294332 | MS.gene87723:CDS |
| CCGCATTGCAACATGGTTCA+GGG | 0.458475 | 7.1:+29294407 | None:intergenic |
| TGATGGAGAGGGATGTTAGA+GGG | 0.462370 | 7.1:+29292245 | None:intergenic |
| CAAGATCGTCGAGATGTTTG+CGG | 0.467447 | 7.1:-29294352 | MS.gene87723:CDS |
| GTAGAACTTCAAAAGAATCC+AGG | 0.472965 | 7.1:+29292111 | None:intergenic |
| GTTGAAGATTTGGCTGATGA+TGG | 0.475193 | 7.1:+29292228 | None:intergenic |
| GAGGGATGTTAGAGGGGAGA+GGG | 0.482083 | 7.1:+29292252 | None:intergenic |
| TTGTTTGGCTATGATATGCT+TGG | 0.487498 | 7.1:-29294536 | MS.gene87723:CDS |
| TTGAGTTTCAAGACGGGACA+TGG | 0.489755 | 7.1:+29292038 | None:intergenic |
| GGGGAGAGATGGGTGGACCT+GGG | 0.494021 | 7.1:+29294428 | None:intergenic |
| TTATGAATCTAGTTATATCT+CGG | 0.497387 | 7.1:-29292009 | MS.gene87723:CDS |
| TTGCTCTTGTTATTCTCACT+TGG | 0.500307 | 7.1:-29292652 | MS.gene87723:intron |
| ATATAACTAGATTCATAAAA+CGG | 0.504673 | 7.1:+29292014 | None:intergenic |
| GGACCTGGGTGTGTTGCGTA+CGG | 0.511866 | 7.1:+29294442 | None:intergenic |
| TTAGGGAGGGTAGCAACAGC+AGG | 0.512840 | 7.1:+29294286 | None:intergenic |
| AGAGGGATGTTAGAGGGGAG+AGG | 0.516535 | 7.1:+29292251 | None:intergenic |
| AACAAATGAGGTTGCAACAT+AGG | 0.527233 | 7.1:+29292170 | None:intergenic |
| ACAAATGAGGTTGCAACATA+GGG | 0.531969 | 7.1:+29292171 | None:intergenic |
| GATGGAGAGGGATGTTAGAG+GGG | 0.542495 | 7.1:+29292246 | None:intergenic |
| TTTGTCTTCAATGATATAGG+AGG | 0.549968 | 7.1:-29292149 | MS.gene87723:CDS |
| TAGAACTTCAAAAGAATCCA+GGG | 0.550593 | 7.1:+29292112 | None:intergenic |
| GAAGGGGCAGAATTGGTTAG+TGG | 0.552006 | 7.1:+29294502 | None:intergenic |
| AAAGACTGTGGTGTTGACAT+AGG | 0.556773 | 7.1:-29294265 | MS.gene87723:CDS |
| CATAGCCAAACAAGTAACCT+TGG | 0.558795 | 7.1:+29294546 | None:intergenic |
| CTATATTATTAGCCCTGACA+TGG | 0.578198 | 7.1:-29294242 | MS.gene87723:CDS |
| AACGGTTTGAGTTTCAAGAC+GGG | 0.587705 | 7.1:+29292032 | None:intergenic |
| AAAAGTGGAAGAGTTTGAGC+AGG | 0.590767 | 7.1:+29292302 | None:intergenic |
| AGGACGAGGATATGGACCCC+TGG | 0.591293 | 7.1:-29292129 | MS.gene87723:CDS |
| ACAGCAGGAAGATTGAGTCC+AGG | 0.592974 | 7.1:+29294301 | None:intergenic |
| GGTTGCCTCAAATCGATGAT+GGG | 0.597219 | 7.1:-29294331 | MS.gene87723:CDS |
| TGTGTTGCGTACGGAACGCA+TGG | 0.597687 | 7.1:+29294451 | None:intergenic |
| TTCAATGATATAGGAGGACG+AGG | 0.600793 | 7.1:-29292143 | MS.gene87723:CDS |
| TGCCGCCCATCATCGATTTG+AGG | 0.604592 | 7.1:+29294326 | None:intergenic |
| GTTGCACTTCAGGACACGAA+GGG | 0.605481 | 7.1:+29294485 | None:intergenic |
| CGCATTGCAACATGGTTCAG+GGG | 0.606881 | 7.1:+29294408 | None:intergenic |
| AAACGGTTTGAGTTTCAAGA+CGG | 0.608051 | 7.1:+29292031 | None:intergenic |
| GGCTAGTTCAATGCTTACCA+AGG | 0.608658 | 7.1:-29294563 | MS.gene87723:CDS |
| TTTGATAGGATTATAACTTG+GGG | 0.626760 | 7.1:-29292329 | MS.gene87723:intron |
| AGCAACGTCTACACCACGAA+AGG | 0.631108 | 7.1:+29292670 | None:intergenic |
| GTCTTAACCGCATTGCAACA+TGG | 0.632276 | 7.1:+29294400 | None:intergenic |
| AGATTTGGCTGATGATGGAG+AGG | 0.636437 | 7.1:+29292233 | None:intergenic |
| AACACCACAGTCTTTAGGGA+GGG | 0.649527 | 7.1:+29294273 | None:intergenic |
| TGTTGCACTTCAGGACACGA+AGG | 0.651824 | 7.1:+29294484 | None:intergenic |
| ACTTGCTGCAGTCCATGTCA+GGG | 0.654891 | 7.1:+29294230 | None:intergenic |
| TCATTGAAGACAAACAAATG+AGG | 0.658731 | 7.1:+29292158 | None:intergenic |
| TGCCTCAAATCGATGATGGG+CGG | 0.660181 | 7.1:-29294328 | MS.gene87723:CDS |
| CAAACATCTCGACGATCTTG+GGG | 0.662281 | 7.1:+29294355 | None:intergenic |
| GCTACCCTCCCTAAAGACTG+TGG | 0.674647 | 7.1:-29294277 | MS.gene87723:CDS |
| CCCTGAACCATGTTGCAATG+CGG | 0.675174 | 7.1:-29294407 | MS.gene87723:CDS |
| GCATTGCAACATGGTTCAGG+GGG | 0.680076 | 7.1:+29294409 | None:intergenic |
| GATTTGGCTGATGATGGAGA+GGG | 0.682226 | 7.1:+29292234 | None:intergenic |
| CAACACCACAGTCTTTAGGG+AGG | 0.690471 | 7.1:+29294272 | None:intergenic |
| TTGCACTTCAGGACACGAAG+GGG | 0.699822 | 7.1:+29294486 | None:intergenic |
| GTTCCGTACGCAACACACCC+AGG | 0.709298 | 7.1:-29294445 | MS.gene87723:CDS |
| AGAACTTCAAAAGAATCCAG+GGG | 0.720026 | 7.1:+29292113 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTAATTATATATTT+CGG | + | chr7.1:29292691-29292710 | None:intergenic | 0.0% |
| !! | ATATATGAAATAGAAAAATA+GGG | + | chr7.1:29292361-29292380 | None:intergenic | 10.0% |
| !! | TATATATGAAATAGAAAAAT+AGG | + | chr7.1:29292362-29292381 | None:intergenic | 10.0% |
| !!! | AAATTAAACCATTTTTTTTT+TGG | + | chr7.1:29292649-29292668 | None:intergenic | 10.0% |
| !!! | TTTTTAACATCAAAATTAAT+TGG | - | chr7.1:29293462-29293481 | MS.gene87723:intron | 10.0% |
| !! | AAATTGTGATAGAAATATTT+GGG | + | chr7.1:29294349-29294368 | None:intergenic | 15.0% |
| !! | ATATAACTAGATTCATAAAA+CGG | + | chr7.1:29294537-29294556 | None:intergenic | 15.0% |
| !! | ATATAAAACCCTATATTTGA+AGG | + | chr7.1:29293442-29293461 | None:intergenic | 20.0% |
| !! | GAAATTGTGATAGAAATATT+TGG | + | chr7.1:29294350-29294369 | None:intergenic | 20.0% |
| !! | GACAAAAAACAATCTTTAAT+CGG | - | chr7.1:29292931-29292950 | MS.gene87723:intron | 20.0% |
| !! | TACTCTTACCAAAAAAAAAA+TGG | - | chr7.1:29292638-29292657 | MS.gene87723:intron | 20.0% |
| !! | TATAAAACCCTATATTTGAA+GGG | + | chr7.1:29293441-29293460 | None:intergenic | 20.0% |
| !! | TCAAAATAATCAATATCTGT+TGG | - | chr7.1:29292727-29292746 | MS.gene87723:CDS | 20.0% |
| !! | TTATGAATCTAGTTATATCT+CGG | - | chr7.1:29294539-29294558 | MS.gene87723:CDS | 20.0% |
| !!! | AAAAGGACTTTTTTTTTTTG+TGG | + | chr7.1:29293203-29293222 | None:intergenic | 20.0% |
| !!! | ATAACAAATTGAGTTGTTTA+TGG | + | chr7.1:29294490-29294509 | None:intergenic | 20.0% |
| !!! | ATTTTGATAGGATTATAACT+TGG | - | chr7.1:29294217-29294236 | MS.gene87723:intron | 20.0% |
| !!! | TACAATGAATTTTTTTTTGC+CGG | + | chr7.1:29293030-29293049 | None:intergenic | 20.0% |
| !!! | TTTTGATAGGATTATAACTT+GGG | - | chr7.1:29294218-29294237 | MS.gene87723:intron | 20.0% |
| ! | AAATAGAAAAATAGGGTTGA+TGG | + | chr7.1:29292354-29292373 | None:intergenic | 25.0% |
| ! | AAATGATAAAATCGAATCGA+TGG | + | chr7.1:29293248-29293267 | None:intergenic | 25.0% |
| ! | AATGTAAGAATTAAGAGAGA+TGG | + | chr7.1:29292769-29292788 | None:intergenic | 25.0% |
| ! | AATTTCTCTTTACTAATTGC+AGG | - | chr7.1:29292515-29292534 | MS.gene87723:intron | 25.0% |
| ! | ATTTCTCTTTACTAATTGCA+GGG | - | chr7.1:29292516-29292535 | MS.gene87723:intron | 25.0% |
| ! | CCAAGTATTACTTATTCATT+AGG | + | chr7.1:29292575-29292594 | None:intergenic | 25.0% |
| ! | CCTAATGAATAAGTAATACT+TGG | - | chr7.1:29292572-29292591 | MS.gene87723:intron | 25.0% |
| ! | TACACATTTACAACATGTTA+GGG | - | chr7.1:29292419-29292438 | MS.gene87723:intron | 25.0% |
| ! | TATGGACAATGCATAATATA+TGG | - | chr7.1:29293152-29293171 | MS.gene87723:intron | 25.0% |
| ! | TCCAATTTATGAGATGAATA+GGG | - | chr7.1:29294137-29294156 | MS.gene87723:intron | 25.0% |
| ! | TCGTAAAAGTTTGCAATATT+TGG | - | chr7.1:29293302-29293321 | MS.gene87723:intron | 25.0% |
| ! | TTACACATTTACAACATGTT+AGG | - | chr7.1:29292418-29292437 | MS.gene87723:intron | 25.0% |
| ! | TTCAATTTCAATAACCTCAT+TGG | - | chr7.1:29293409-29293428 | MS.gene87723:intron | 25.0% |
| ! | TTGTTTGTCTTCAATGATAT+AGG | - | chr7.1:29294396-29294415 | MS.gene87723:CDS | 25.0% |
| ! | TTTCGGTTAAAACTTACAAT+CGG | + | chr7.1:29292674-29292693 | None:intergenic | 25.0% |
| ! | TTTGATAGGATTATAACTTG+GGG | - | chr7.1:29294219-29294238 | MS.gene87723:intron | 25.0% |
| !! | AACTTTATTTATCCCAAAAG+AGG | + | chr7.1:29293713-29293732 | None:intergenic | 25.0% |
| !! | AATAAGTAATACTTGGTTTG+TGG | - | chr7.1:29292579-29292598 | MS.gene87723:intron | 25.0% |
| !! | ACTTTATTTATCCCAAAAGA+GGG | + | chr7.1:29293712-29293731 | None:intergenic | 25.0% |
| !! | AGTTTGCAATATTTGGAATT+AGG | - | chr7.1:29293309-29293328 | MS.gene87723:intron | 25.0% |
| !! | ATTGCAAACTTTTACGATTA+TGG | + | chr7.1:29293299-29293318 | None:intergenic | 25.0% |
| !!! | CTTTTGGGATAAATAAAGTT+CGG | - | chr7.1:29293713-29293732 | MS.gene87723:intron | 25.0% |
| AAGTACATGTTTCGAAGAAA+AGG | + | chr7.1:29293220-29293239 | None:intergenic | 30.0% | |
| ATCAATATCTGTTGGACATT+TGG | - | chr7.1:29292735-29292754 | MS.gene87723:CDS | 30.0% | |
| ATGGAAAAAGACTCTCAAAA+AGG | + | chr7.1:29293086-29293105 | None:intergenic | 30.0% | |
| ATTAACTTTGTGCATGACAA+AGG | + | chr7.1:29292838-29292857 | None:intergenic | 30.0% | |
| CTTTAATCGGATTATCTAGA+GGG | - | chr7.1:29292944-29292963 | MS.gene87723:intron | 30.0% | |
| GAAGAAAAAGACTAGAACAA+TGG | + | chr7.1:29293105-29293124 | None:intergenic | 30.0% | |
| GTCCAATTTATGAGATGAAT+AGG | - | chr7.1:29294136-29294155 | MS.gene87723:intron | 30.0% | |
| TAGAACTTCAAAAGAATCCA+GGG | + | chr7.1:29294439-29294458 | None:intergenic | 30.0% | |
| TCATTGAAGACAAACAAATG+AGG | + | chr7.1:29294393-29294412 | None:intergenic | 30.0% | |
| TCTTTAATCGGATTATCTAG+AGG | - | chr7.1:29292943-29292962 | MS.gene87723:intron | 30.0% | |
| TGAATTAGTCAAGAAGTCTT+TGG | - | chr7.1:29294167-29294186 | MS.gene87723:intron | 30.0% | |
| TGCATAATATATGGAAGATC+CGG | - | chr7.1:29293161-29293180 | MS.gene87723:intron | 30.0% | |
| TTCAACATCATTTCTCTGTT+AGG | - | chr7.1:29293379-29293398 | MS.gene87723:intron | 30.0% | |
| TTTGTCTTCAATGATATAGG+AGG | - | chr7.1:29294399-29294418 | MS.gene87723:CDS | 30.0% | |
| ! | TATTTTCCTTTCCCTCTTTT+GGG | - | chr7.1:29293698-29293717 | MS.gene87723:intron | 30.0% |
| ! | TTATTTTCCTTTCCCTCTTT+TGG | - | chr7.1:29293697-29293716 | MS.gene87723:intron | 30.0% |
| ! | TTTATGATTGTACCGACATT+GGG | + | chr7.1:29293947-29293966 | None:intergenic | 30.0% |
| !! | ATGTTGCACAACATTTTGAT+AGG | - | chr7.1:29294205-29294224 | MS.gene87723:intron | 30.0% |
| !!! | AGGACTTTTTTTTTTTGTGG+TGG | + | chr7.1:29293200-29293219 | None:intergenic | 30.0% |
| !!! | TTCTAGTTTTTGCTAGTTGT+GGG | + | chr7.1:29293510-29293529 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTTTGTGGTGGTC+AGG | + | chr7.1:29293195-29293214 | None:intergenic | 30.0% |
| AACAAATGAGGTTGCAACAT+AGG | + | chr7.1:29294381-29294400 | None:intergenic | 35.0% | |
| ACAAATGAGGTTGCAACATA+GGG | + | chr7.1:29294380-29294399 | None:intergenic | 35.0% | |
| AGAACTTCAAAAGAATCCAG+GGG | + | chr7.1:29294438-29294457 | None:intergenic | 35.0% | |
| ATAAACACTCGCAACGATAA+CGG | + | chr7.1:29293747-29293766 | None:intergenic | 35.0% | |
| ATAACACGTGAAAAGACGTT+TGG | - | chr7.1:29294060-29294079 | MS.gene87723:intron | 35.0% | |
| ATACCTAAACTCATTGGGTA+GGG | - | chr7.1:29292987-29293006 | MS.gene87723:intron | 35.0% | |
| ATTAGTCAAGAAGTCTTTGG+AGG | - | chr7.1:29294170-29294189 | MS.gene87723:intron | 35.0% | |
| ATTTATCCCAAAAGAGGGAA+AGG | + | chr7.1:29293707-29293726 | None:intergenic | 35.0% | |
| CATAAACCACTATCTCTCTT+AGG | - | chr7.1:29293961-29293980 | MS.gene87723:intron | 35.0% | |
| CATAATATATGGAAGATCCG+GGG | - | chr7.1:29293163-29293182 | MS.gene87723:intron | 35.0% | |
| CGTCGCGAAAAATAAAGATA+TGG | + | chr7.1:29293778-29293797 | None:intergenic | 35.0% | |
| CTATATTATTAGCCCTGACA+TGG | - | chr7.1:29292306-29292325 | MS.gene87723:CDS | 35.0% | |
| CTCGTTTATTCTGACTGTAT+TGG | + | chr7.1:29292611-29292630 | None:intergenic | 35.0% | |
| GATAAAACCTTGAGTGAACA+TGG | + | chr7.1:29293676-29293695 | None:intergenic | 35.0% | |
| GCATAATATATGGAAGATCC+GGG | - | chr7.1:29293162-29293181 | MS.gene87723:intron | 35.0% | |
| GCCCTATTCATCTCATAAAT+TGG | + | chr7.1:29294141-29294160 | None:intergenic | 35.0% | |
| GTAAGAATTAAGAGAGATGG+CGG | + | chr7.1:29292766-29292785 | None:intergenic | 35.0% | |
| GTAGAACTTCAAAAGAATCC+AGG | + | chr7.1:29294440-29294459 | None:intergenic | 35.0% | |
| TATACCTAAACTCATTGGGT+AGG | - | chr7.1:29292986-29293005 | MS.gene87723:intron | 35.0% | |
| TATGGTTACCCAATGATTGA+GGG | + | chr7.1:29293281-29293300 | None:intergenic | 35.0% | |
| TCGGTATACCTAAACTCATT+GGG | - | chr7.1:29292982-29293001 | MS.gene87723:intron | 35.0% | |
| TGAACTTAACTCACTTGGTA+TGG | - | chr7.1:29293134-29293153 | MS.gene87723:intron | 35.0% | |
| TTATCTAGAGGGAAAAAGCT+CGG | - | chr7.1:29292955-29292974 | MS.gene87723:intron | 35.0% | |
| TTATGGTTACCCAATGATTG+AGG | + | chr7.1:29293282-29293301 | None:intergenic | 35.0% | |
| TTCGGTATACCTAAACTCAT+TGG | - | chr7.1:29292981-29293000 | MS.gene87723:intron | 35.0% | |
| TTGGGATAAATAAAGTTCGG+TGG | - | chr7.1:29293716-29293735 | MS.gene87723:intron | 35.0% | |
| TTGTTTGGCTATGATATGCT+TGG | - | chr7.1:29292012-29292031 | MS.gene87723:CDS | 35.0% | |
| ! | AAACGGTTTGAGTTTCAAGA+CGG | + | chr7.1:29294520-29294539 | None:intergenic | 35.0% |
| ! | GTTTATGATTGTACCGACAT+TGG | + | chr7.1:29293948-29293967 | None:intergenic | 35.0% |
| ! | TTATGATTGTACCGACATTG+GGG | + | chr7.1:29293946-29293965 | None:intergenic | 35.0% |
| !! | ATTTGGGCTTGTTGAAGATT+TGG | + | chr7.1:29294333-29294352 | None:intergenic | 35.0% |
| !! | GCTATGATATGCTTGGTTTT+GGG | - | chr7.1:29292019-29292038 | MS.gene87723:CDS | 35.0% |
| !! | TTGCTCTTGTTATTCTCACT+TGG | - | chr7.1:29293896-29293915 | MS.gene87723:intron | 35.0% |
| !!! | ATTGCGTGATGTTGTTGTTT+TGG | + | chr7.1:29293994-29294013 | None:intergenic | 35.0% |
| !!! | CAAACTCTTCCACTTTTTGT+TGG | - | chr7.1:29294252-29294271 | MS.gene87723:CDS | 35.0% |
| !!! | CTTCTAGTTTTTGCTAGTTG+TGG | + | chr7.1:29293511-29293530 | None:intergenic | 35.0% |
| !!! | TTGCGTGATGTTGTTGTTTT+GGG | + | chr7.1:29293993-29294012 | None:intergenic | 35.0% |
| AAAAGTGGAAGAGTTTGAGC+AGG | + | chr7.1:29294249-29294268 | None:intergenic | 40.0% | |
| ATGGTTACCCAATGATTGAG+GGG | + | chr7.1:29293280-29293299 | None:intergenic | 40.0% | |
| ATGTCAACACCACAGTCTTT+AGG | + | chr7.1:29292283-29292302 | None:intergenic | 40.0% | |
| ATGTTAGTCAGCTAAGACGT+TGG | + | chr7.1:29294038-29294057 | None:intergenic | 40.0% | |
| CAACATCACGCAATTCATTG+AGG | - | chr7.1:29294000-29294019 | MS.gene87723:intron | 40.0% | |
| CATAGCCAAACAAGTAACCT+TGG | + | chr7.1:29292005-29292024 | None:intergenic | 40.0% | |
| GCACACTCCCTTCAAATATA+GGG | - | chr7.1:29293431-29293450 | MS.gene87723:intron | 40.0% | |
| GCTTACCAAGGTTACTTGTT+TGG | - | chr7.1:29291997-29292016 | MS.gene87723:CDS | 40.0% | |
| GTTGAAGATTTGGCTGATGA+TGG | + | chr7.1:29294323-29294342 | None:intergenic | 40.0% | |
| TACCTAAACTCATTGGGTAG+GGG | - | chr7.1:29292988-29293007 | MS.gene87723:intron | 40.0% | |
| TATCTAGAGGGAAAAAGCTC+GGG | - | chr7.1:29292956-29292975 | MS.gene87723:intron | 40.0% | |
| TGTCAACACCACAGTCTTTA+GGG | + | chr7.1:29292282-29292301 | None:intergenic | 40.0% | |
| TTCAATGATATAGGAGGACG+AGG | - | chr7.1:29294405-29294424 | MS.gene87723:CDS | 40.0% | |
| ! | AACGGTTTGAGTTTCAAGAC+GGG | + | chr7.1:29294519-29294538 | None:intergenic | 40.0% |
| ! | ACTAGTATTGAGCAGCTTGA+AGG | - | chr7.1:29292542-29292561 | MS.gene87723:intron | 40.0% |
| ! | AGTAAGTTTTGCACCTTTCG+TGG | - | chr7.1:29293865-29293884 | MS.gene87723:intron | 40.0% |
| ! | CTAGTATTGAGCAGCTTGAA+GGG | - | chr7.1:29292543-29292562 | MS.gene87723:intron | 40.0% |
| ! | GGCTAAGGCTCAATTTTGTT+GGG | - | chr7.1:29294110-29294129 | MS.gene87723:intron | 40.0% |
| ! | GGCTATGATATGCTTGGTTT+TGG | - | chr7.1:29292018-29292037 | MS.gene87723:CDS | 40.0% |
| ! | GTTATTCTCACTTGGTGAGA+AGG | - | chr7.1:29293904-29293923 | MS.gene87723:intron | 40.0% |
| ! | GTTTTTGCCCCTCAATCATT+GGG | - | chr7.1:29293270-29293289 | MS.gene87723:intron | 40.0% |
| !! | AAAGACTGTGGTGTTGACAT+AGG | - | chr7.1:29292283-29292302 | MS.gene87723:CDS | 40.0% |
| !! | GAAGCATTGCCAACAAAAAG+TGG | + | chr7.1:29294264-29294283 | None:intergenic | 40.0% |
| !! | GCTAAAGTTTGTTGCACTTC+AGG | + | chr7.1:29292076-29292095 | None:intergenic | 40.0% |
| !! | TGTTTTTGCCCCTCAATCAT+TGG | - | chr7.1:29293269-29293288 | MS.gene87723:intron | 40.0% |
| !!! | TGATGTTGTTGTTTTGGGGT+GGG | + | chr7.1:29293988-29294007 | None:intergenic | 40.0% |
| !!! | TGCGTGATGTTGTTGTTTTG+GGG | + | chr7.1:29293992-29294011 | None:intergenic | 40.0% |
| ACCTAAACTCATTGGGTAGG+GGG | - | chr7.1:29292989-29293008 | MS.gene87723:intron | 45.0% | |
| ATCTAGAGGGAAAAAGCTCG+GGG | - | chr7.1:29292957-29292976 | MS.gene87723:intron | 45.0% | |
| ATGGTCTGTGAACCATGAGA+TGG | + | chr7.1:29293657-29293676 | None:intergenic | 45.0% | |
| ATGGTTCCCGTTGAGTACAA+CGG | - | chr7.1:29293584-29293603 | MS.gene87723:intron | 45.0% | |
| CAAACATCTCGACGATCTTG+GGG | + | chr7.1:29292196-29292215 | None:intergenic | 45.0% | |
| CAAGATCGTCGAGATGTTTG+CGG | - | chr7.1:29292196-29292215 | MS.gene87723:CDS | 45.0% | |
| CCAAGTGAGTTAAGTTCACG+AGG | + | chr7.1:29293132-29293151 | None:intergenic | 45.0% | |
| CCTCGTGAACTTAACTCACT+TGG | - | chr7.1:29293129-29293148 | MS.gene87723:intron | 45.0% | |
| CGCAATTCATTGAGGATCAC+TGG | - | chr7.1:29294008-29294027 | MS.gene87723:intron | 45.0% | |
| GATATAGGAGGACGAGGATA+TGG | - | chr7.1:29294411-29294430 | MS.gene87723:CDS | 45.0% | |
| GCAAACATCTCGACGATCTT+GGG | + | chr7.1:29292197-29292216 | None:intergenic | 45.0% | |
| GGCACACTCCCTTCAAATAT+AGG | - | chr7.1:29293430-29293449 | MS.gene87723:intron | 45.0% | |
| GGTTGCCTCAAATCGATGAT+GGG | - | chr7.1:29292217-29292236 | MS.gene87723:CDS | 45.0% | |
| GTACTCAACGGGAACCATTT+AGG | + | chr7.1:29293582-29293601 | None:intergenic | 45.0% | |
| GTCTTAACCGCATTGCAACA+TGG | + | chr7.1:29292151-29292170 | None:intergenic | 45.0% | |
| GTTGCGAGTGTTTATACTCG+TGG | - | chr7.1:29293752-29293771 | MS.gene87723:intron | 45.0% | |
| TCACAGACCATGTTCACTCA+AGG | - | chr7.1:29293666-29293685 | MS.gene87723:intron | 45.0% | |
| TGATGGAGAGGGATGTTAGA+GGG | + | chr7.1:29294306-29294325 | None:intergenic | 45.0% | |
| TGGTCTGTGAACCATGAGAT+GGG | + | chr7.1:29293656-29293675 | None:intergenic | 45.0% | |
| TTGAGTTTCAAGACGGGACA+TGG | + | chr7.1:29294513-29294532 | None:intergenic | 45.0% | |
| ! | AACACCACAGTCTTTAGGGA+GGG | + | chr7.1:29292278-29292297 | None:intergenic | 45.0% |
| ! | AAGTTGGTTATGCGAGAGGA+AGG | + | chr7.1:29293628-29293647 | None:intergenic | 45.0% |
| ! | ATGATGGAGAGGGATGTTAG+AGG | + | chr7.1:29294307-29294326 | None:intergenic | 45.0% |
| ! | CGGCTAAGGCTCAATTTTGT+TGG | - | chr7.1:29294109-29294128 | MS.gene87723:intron | 45.0% |
| ! | GGCTAGTTCAATGCTTACCA+AGG | - | chr7.1:29291985-29292004 | MS.gene87723:CDS | 45.0% |
| ! | TCCTTTGGTAACCCCAATGT+CGG | - | chr7.1:29293932-29293951 | MS.gene87723:intron | 45.0% |
| ! | TGTGAACCATGAGATGGGTT+CGG | + | chr7.1:29293651-29293670 | None:intergenic | 45.0% |
| !! | AGATTTGGCTGATGATGGAG+AGG | + | chr7.1:29294318-29294337 | None:intergenic | 45.0% |
| !! | GATTTGGCTGATGATGGAGA+GGG | + | chr7.1:29294317-29294336 | None:intergenic | 45.0% |
| !! | GCTTAGCCTTTTGCGTAAAG+CGG | - | chr7.1:29294089-29294108 | MS.gene87723:intron | 45.0% |
| !!! | GGTGAGAAGGCATTTTCCTT+TGG | - | chr7.1:29293917-29293936 | MS.gene87723:intron | 45.0% |
| !!! | GTGATGTTGTTGTTTTGGGG+TGG | + | chr7.1:29293989-29294008 | None:intergenic | 45.0% |
| !!! | TTAAAATACAATATATTTTT+TGG | - | chr7.1:29292890-29292909 | MS.gene87723:intron | 5.0% |
| AAACTCATTGGGTAGGGGGT+GGG | - | chr7.1:29292993-29293012 | MS.gene87723:intron | 50.0% | |
| AAGCGAACCTTCCGCCTAAA+TGG | - | chr7.1:29293565-29293584 | MS.gene87723:intron | 50.0% | |
| ACAGCAGGAAGATTGAGTCC+AGG | + | chr7.1:29292250-29292269 | None:intergenic | 50.0% | |
| ACCCCCTACCCAATGAGTTT+AGG | + | chr7.1:29292993-29293012 | None:intergenic | 50.0% | |
| ACCGACATTGGGGTTACCAA+AGG | + | chr7.1:29293936-29293955 | None:intergenic | 50.0% | |
| ACCGCATTGCAACATGGTTC+AGG | + | chr7.1:29292145-29292164 | None:intergenic | 50.0% | |
| AGCAACGTCTACACCACGAA+AGG | + | chr7.1:29293881-29293900 | None:intergenic | 50.0% | |
| AGGGAAAAAGCTCGGGGATT+CGG | - | chr7.1:29292963-29292982 | MS.gene87723:intron | 50.0% | |
| CAACTTCCGAACCCATCTCA+TGG | - | chr7.1:29293642-29293661 | MS.gene87723:intron | 50.0% | |
| CCCTGAACCATGTTGCAATG+CGG | - | chr7.1:29292141-29292160 | MS.gene87723:CDS | 50.0% | |
| CCGCATTGCAACATGGTTCA+GGG | + | chr7.1:29292144-29292163 | None:intergenic | 50.0% | |
| CGCAAACATCTCGACGATCT+TGG | + | chr7.1:29292198-29292217 | None:intergenic | 50.0% | |
| CGCATTGCAACATGGTTCAG+GGG | + | chr7.1:29292143-29292162 | None:intergenic | 50.0% | |
| CGGTTGCCTCAAATCGATGA+TGG | - | chr7.1:29292216-29292235 | MS.gene87723:CDS | 50.0% | |
| CTCAACGGGAACCATTTAGG+CGG | + | chr7.1:29293579-29293598 | None:intergenic | 50.0% | |
| CTCGCATCCGTTGTACTCAA+CGG | + | chr7.1:29293594-29293613 | None:intergenic | 50.0% | |
| GAAGGGGCAGAATTGGTTAG+TGG | + | chr7.1:29292049-29292068 | None:intergenic | 50.0% | |
| GAAGGTTCGCTTACTCTCAC+AGG | + | chr7.1:29293557-29293576 | None:intergenic | 50.0% | |
| GATGGAGAGGGATGTTAGAG+GGG | + | chr7.1:29294305-29294324 | None:intergenic | 50.0% | |
| GCATTGCAACATGGTTCAGG+GGG | + | chr7.1:29292142-29292161 | None:intergenic | 50.0% | |
| GGGGTGGGGTTAAAATCAAC+CGG | - | chr7.1:29293008-29293027 | MS.gene87723:intron | 50.0% | |
| GTGGGACCTAAGAGAGATAG+TGG | + | chr7.1:29293970-29293989 | None:intergenic | 50.0% | |
| GTTGAGTACAACGGATGCGA+GGG | - | chr7.1:29293593-29293612 | MS.gene87723:intron | 50.0% | |
| GTTGCACTTCAGGACACGAA+GGG | + | chr7.1:29292066-29292085 | None:intergenic | 50.0% | |
| TAAACTCATTGGGTAGGGGG+TGG | - | chr7.1:29292992-29293011 | MS.gene87723:intron | 50.0% | |
| TCGCATCCGTTGTACTCAAC+GGG | + | chr7.1:29293593-29293612 | None:intergenic | 50.0% | |
| TGGTGGTCAGGTTTAAACCC+CGG | + | chr7.1:29293183-29293202 | None:intergenic | 50.0% | |
| TGTTGCACTTCAGGACACGA+AGG | + | chr7.1:29292067-29292086 | None:intergenic | 50.0% | |
| TTGAGTACAACGGATGCGAG+GGG | - | chr7.1:29293594-29293613 | MS.gene87723:intron | 50.0% | |
| TTGCACTTCAGGACACGAAG+GGG | + | chr7.1:29292065-29292084 | None:intergenic | 50.0% | |
| ! | ACTTGCTGCAGTCCATGTCA+GGG | + | chr7.1:29292321-29292340 | None:intergenic | 50.0% |
| ! | CAACACCACAGTCTTTAGGG+AGG | + | chr7.1:29292279-29292298 | None:intergenic | 50.0% |
| ! | CATGAGATGGGTTCGGAAGT+TGG | + | chr7.1:29293644-29293663 | None:intergenic | 50.0% |
| ! | CCTTAGCCGCTTTACGCAAA+AGG | + | chr7.1:29294098-29294117 | None:intergenic | 50.0% |
| ! | CCTTTTGCGTAAAGCGGCTA+AGG | - | chr7.1:29294095-29294114 | MS.gene87723:intron | 50.0% |
| ! | TACTTGCTGCAGTCCATGTC+AGG | + | chr7.1:29292322-29292341 | None:intergenic | 50.0% |
| ! | TCGACGATCTTGGGGAGTTT+TGG | + | chr7.1:29292188-29292207 | None:intergenic | 50.0% |
| ! | TCGGAAGTTGGTTATGCGAG+AGG | + | chr7.1:29293632-29293651 | None:intergenic | 50.0% |
| ! | TTGAAGGGAGTGTGCCAATG+AGG | + | chr7.1:29293426-29293445 | None:intergenic | 50.0% |
| ! | TTTTTCGCGACGCTACAGCA+AGG | - | chr7.1:29293786-29293805 | MS.gene87723:intron | 50.0% |
| !! | AGTCTTTGGAGGCGCTTAAG+AGG | - | chr7.1:29294181-29294200 | MS.gene87723:intron | 50.0% |
| !! | TGCCTCAAATCGATGATGGG+CGG | - | chr7.1:29292220-29292239 | MS.gene87723:CDS | 50.0% |
| AACTCATTGGGTAGGGGGTG+GGG | - | chr7.1:29292994-29293013 | MS.gene87723:intron | 55.0% | |
| ACATGGTTCAGGGGGAGAGA+TGG | + | chr7.1:29292134-29292153 | None:intergenic | 55.0% | |
| ACGGGAACCATTTAGGCGGA+AGG | + | chr7.1:29293575-29293594 | None:intergenic | 55.0% | |
| AGAGGGATGTTAGAGGGGAG+AGG | + | chr7.1:29294300-29294319 | None:intergenic | 55.0% | |
| AGAGGGGAGAGGGATGTTAG+AGG | + | chr7.1:29294289-29294308 | None:intergenic | 55.0% | |
| AGGACACGAAGGGGCAGAAT+TGG | + | chr7.1:29292056-29292075 | None:intergenic | 55.0% | |
| CATGGTTCAGGGGGAGAGAT+GGG | + | chr7.1:29292133-29292152 | None:intergenic | 55.0% | |
| CGTTGAGTACAACGGATGCG+AGG | - | chr7.1:29293592-29293611 | MS.gene87723:intron | 55.0% | |
| GAGGGATGTTAGAGGGGAGA+GGG | + | chr7.1:29294299-29294318 | None:intergenic | 55.0% | |
| GCTACCCTCCCTAAAGACTG+TGG | - | chr7.1:29292271-29292290 | MS.gene87723:CDS | 55.0% | |
| TGTGTTGCGTACGGAACGCA+TGG | + | chr7.1:29292100-29292119 | None:intergenic | 55.0% | |
| TTAGGGAGGGTAGCAACAGC+AGG | + | chr7.1:29292265-29292284 | None:intergenic | 55.0% | |
| !! | TGCCGCCCATCATCGATTTG+AGG | + | chr7.1:29292225-29292244 | None:intergenic | 55.0% |
| AGGACGAGGATATGGACCCC+TGG | - | chr7.1:29294419-29294438 | MS.gene87723:CDS | 60.0% | |
| GGACCTGGGTGTGTTGCGTA+CGG | + | chr7.1:29292109-29292128 | None:intergenic | 60.0% | |
| GTTCCGTACGCAACACACCC+AGG | - | chr7.1:29292103-29292122 | MS.gene87723:CDS | 60.0% | |
| !! | TCGATGATGGGCGGCATACC+TGG | - | chr7.1:29292229-29292248 | MS.gene87723:CDS | 60.0% |
| GGGGAGAGATGGGTGGACCT+GGG | + | chr7.1:29292123-29292142 | None:intergenic | 65.0% | |
| GGTTCAGGGGGAGAGATGGG+TGG | + | chr7.1:29292130-29292149 | None:intergenic | 65.0% | |
| GGGGGAGAGATGGGTGGACC+TGG | + | chr7.1:29292124-29292143 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 29291983 | 29294587 | 29291983 | ID=MS.gene87723 |
| chr7.1 | mRNA | 29291983 | 29294587 | 29291983 | ID=MS.gene87723.t1;Parent=MS.gene87723 |
| chr7.1 | exon | 29294232 | 29294587 | 29294232 | ID=MS.gene87723.t1.exon1;Parent=MS.gene87723.t1 |
| chr7.1 | CDS | 29294232 | 29294587 | 29294232 | ID=cds.MS.gene87723.t1;Parent=MS.gene87723.t1 |
| chr7.1 | exon | 29292653 | 29292766 | 29292653 | ID=MS.gene87723.t1.exon2;Parent=MS.gene87723.t1 |
| chr7.1 | CDS | 29292653 | 29292766 | 29292653 | ID=cds.MS.gene87723.t1;Parent=MS.gene87723.t1 |
| chr7.1 | exon | 29291983 | 29292343 | 29291983 | ID=MS.gene87723.t1.exon3;Parent=MS.gene87723.t1 |
| chr7.1 | CDS | 29291983 | 29292343 | 29291983 | ID=cds.MS.gene87723.t1;Parent=MS.gene87723.t1 |
| Gene Sequence |
| Protein sequence |
