Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87841.t1 | XP_024630170.1 | 86 | 750 | 103 | 2 | 1 | 749 | 1 | 749 | 0.00E+00 | 1310.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87841.t1 | Q9SZL8 | 33.4 | 575 | 374 | 7 | 6 | 574 | 69 | 640 | 2.0e-98 | 361.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87841.t1 | A0A396JHA3 | 79.1 | 593 | 124 | 0 | 1 | 593 | 1 | 593 | 5.1e-289 | 1003.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene87841.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87841.t1 | MTR_7g074790 | 72.472 | 178 | 31 | 1 | 1 | 178 | 1 | 160 | 6.10e-82 | 261 |
| MS.gene87841.t1 | MTR_7g074790 | 81.081 | 74 | 13 | 1 | 676 | 749 | 157 | 229 | 1.20e-33 | 129 |
| MS.gene87841.t1 | MTR_5g039760 | 61.165 | 206 | 55 | 2 | 1 | 205 | 1 | 182 | 3.18e-79 | 252 |
| MS.gene87841.t1 | MTR_7g061980 | 66.387 | 119 | 40 | 0 | 1 | 119 | 1 | 119 | 1.26e-50 | 172 |
| MS.gene87841.t1 | MTR_0558s0020 | 33.582 | 268 | 155 | 6 | 3 | 250 | 32 | 296 | 4.98e-39 | 147 |
| MS.gene87841.t1 | MTR_6g051425 | 31.900 | 279 | 178 | 5 | 9 | 277 | 13 | 289 | 1.34e-37 | 144 |
| MS.gene87841.t1 | MTR_3g058090 | 52.846 | 123 | 37 | 1 | 543 | 665 | 5 | 106 | 3.42e-31 | 118 |
| MS.gene87841.t1 | MTR_8g446020 | 31.600 | 250 | 145 | 6 | 3 | 250 | 31 | 256 | 1.12e-30 | 121 |
| MS.gene87841.t1 | MTR_0402s0040 | 41.989 | 181 | 100 | 4 | 10 | 187 | 26 | 204 | 1.82e-30 | 126 |
| MS.gene87841.t1 | MTR_6g090505 | 33.624 | 229 | 136 | 5 | 45 | 257 | 10 | 238 | 4.20e-28 | 117 |
| MS.gene87841.t1 | MTR_4g102720 | 34.911 | 169 | 76 | 2 | 7 | 175 | 4 | 138 | 1.28e-26 | 108 |
| MS.gene87841.t1 | MTR_1g083640 | 27.984 | 243 | 152 | 6 | 3 | 225 | 47 | 286 | 1.16e-24 | 105 |
| MS.gene87841.t1 | MTR_1g070355 | 27.039 | 233 | 163 | 3 | 15 | 243 | 79 | 308 | 6.28e-23 | 103 |
| MS.gene87841.t1 | MTR_4g069880 | 58.824 | 68 | 28 | 0 | 1 | 68 | 1 | 68 | 7.30e-21 | 87.4 |
| MS.gene87841.t1 | MTR_1g019850 | 33.566 | 143 | 82 | 4 | 3 | 141 | 63 | 196 | 1.92e-17 | 82.8 |
| MS.gene87841.t1 | MTR_4g035820 | 23.988 | 321 | 223 | 8 | 10 | 319 | 75 | 385 | 5.06e-17 | 85.9 |
| MS.gene87841.t1 | MTR_5g015480 | 37.179 | 156 | 84 | 5 | 4 | 156 | 53 | 197 | 8.40e-17 | 81.6 |
| MS.gene87841.t1 | MTR_5g076070 | 25.328 | 229 | 166 | 3 | 13 | 238 | 56 | 282 | 1.41e-16 | 81.3 |
| MS.gene87841.t1 | MTR_0337s0040 | 27.751 | 209 | 128 | 4 | 11 | 217 | 37 | 224 | 1.93e-16 | 79.7 |
| MS.gene87841.t1 | MTR_2g099430 | 48.837 | 86 | 42 | 2 | 35 | 119 | 28 | 112 | 7.47e-16 | 74.7 |
| MS.gene87841.t1 | MTR_6g022070 | 28.571 | 175 | 118 | 3 | 304 | 477 | 1 | 169 | 1.02e-15 | 79.7 |
| MS.gene87841.t1 | MTR_4g117620 | 72.000 | 50 | 12 | 2 | 699 | 748 | 30 | 77 | 2.56e-15 | 72.0 |
| MS.gene87841.t1 | MTR_7g113010 | 41.732 | 127 | 58 | 5 | 10 | 134 | 457 | 569 | 2.68e-15 | 80.1 |
| MS.gene87841.t1 | MTR_7g446510 | 29.651 | 172 | 121 | 0 | 87 | 258 | 158 | 329 | 3.17e-15 | 78.2 |
| MS.gene87841.t1 | MTR_2g014100 | 25.837 | 209 | 132 | 6 | 3 | 191 | 40 | 245 | 4.28e-14 | 73.2 |
| MS.gene87841.t1 | MTR_1g013060 | 26.923 | 208 | 145 | 3 | 7 | 208 | 21 | 227 | 4.31e-14 | 72.8 |
| MS.gene87841.t1 | MTR_7g446520 | 26.872 | 227 | 151 | 3 | 14 | 240 | 92 | 303 | 4.71e-14 | 74.7 |
| MS.gene87841.t1 | MTR_7g446480 | 29.651 | 172 | 121 | 0 | 87 | 258 | 143 | 314 | 1.49e-13 | 72.8 |
| MS.gene87841.t1 | MTR_5g045210 | 31.000 | 100 | 67 | 1 | 545 | 642 | 20 | 119 | 6.09e-13 | 68.6 |
| MS.gene87841.t1 | MTR_6g017200 | 45.783 | 83 | 43 | 2 | 10 | 91 | 58 | 139 | 6.63e-13 | 67.4 |
| MS.gene87841.t1 | MTR_2g070590 | 41.346 | 104 | 57 | 3 | 10 | 110 | 17 | 119 | 8.23e-13 | 66.2 |
| MS.gene87841.t1 | MTR_1g086270 | 31.707 | 82 | 56 | 0 | 304 | 385 | 1 | 82 | 9.78e-13 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87841.t1 | AT4G38180 | 32.149 | 619 | 408 | 8 | 6 | 615 | 69 | 684 | 6.96e-111 | 355 |
| MS.gene87841.t1 | AT4G15090 | 30.890 | 573 | 390 | 6 | 3 | 572 | 44 | 613 | 2.89e-102 | 333 |
| MS.gene87841.t1 | AT4G15090 | 30.890 | 573 | 390 | 6 | 3 | 572 | 44 | 613 | 2.89e-102 | 333 |
| MS.gene87841.t1 | AT4G15090 | 30.890 | 573 | 390 | 6 | 3 | 572 | 44 | 613 | 2.89e-102 | 333 |
| MS.gene87841.t1 | AT4G15090 | 30.890 | 573 | 390 | 6 | 3 | 572 | 44 | 613 | 2.89e-102 | 333 |
| MS.gene87841.t1 | AT4G15090 | 30.890 | 573 | 390 | 6 | 3 | 572 | 44 | 613 | 2.89e-102 | 333 |
| MS.gene87841.t1 | AT1G76320 | 29.953 | 641 | 422 | 12 | 14 | 651 | 1 | 617 | 3.22e-84 | 281 |
| MS.gene87841.t1 | AT3G22170 | 28.916 | 581 | 373 | 8 | 3 | 568 | 63 | 618 | 8.00e-84 | 284 |
| MS.gene87841.t1 | AT3G22170 | 28.916 | 581 | 373 | 8 | 3 | 568 | 63 | 618 | 8.00e-84 | 284 |
| MS.gene87841.t1 | AT3G06250 | 29.519 | 603 | 367 | 12 | 9 | 604 | 189 | 740 | 1.19e-83 | 282 |
| MS.gene87841.t1 | AT3G06250 | 38.462 | 104 | 48 | 3 | 9 | 110 | 27 | 116 | 9.77e-11 | 65.9 |
| MS.gene87841.t1 | AT3G06250 | 29.519 | 603 | 367 | 12 | 9 | 604 | 189 | 740 | 1.19e-83 | 282 |
| MS.gene87841.t1 | AT3G06250 | 38.462 | 104 | 48 | 3 | 9 | 110 | 27 | 116 | 9.77e-11 | 65.9 |
| MS.gene87841.t1 | AT3G06250 | 29.519 | 603 | 367 | 12 | 9 | 604 | 189 | 740 | 1.19e-83 | 282 |
| MS.gene87841.t1 | AT3G06250 | 38.462 | 104 | 48 | 3 | 9 | 110 | 27 | 116 | 9.77e-11 | 65.9 |
| MS.gene87841.t1 | AT1G76320 | 29.953 | 641 | 422 | 12 | 14 | 651 | 1 | 617 | 1.27e-83 | 281 |
| MS.gene87841.t1 | AT1G76320 | 29.953 | 641 | 422 | 12 | 14 | 651 | 1 | 617 | 1.37e-83 | 281 |
| MS.gene87841.t1 | AT1G76320 | 29.953 | 641 | 422 | 12 | 14 | 651 | 1 | 617 | 1.37e-83 | 281 |
| MS.gene87841.t1 | AT5G18960 | 28.358 | 603 | 377 | 13 | 9 | 604 | 210 | 764 | 5.15e-75 | 259 |
| MS.gene87841.t1 | AT5G18960 | 39.423 | 104 | 47 | 3 | 9 | 110 | 42 | 131 | 2.74e-11 | 67.8 |
| MS.gene87841.t1 | AT5G18960 | 28.358 | 603 | 377 | 13 | 9 | 604 | 210 | 764 | 5.15e-75 | 259 |
| MS.gene87841.t1 | AT5G18960 | 39.423 | 104 | 47 | 3 | 9 | 110 | 42 | 131 | 2.74e-11 | 67.8 |
| MS.gene87841.t1 | AT2G27110 | 29.223 | 592 | 384 | 11 | 9 | 596 | 48 | 608 | 7.78e-73 | 254 |
| MS.gene87841.t1 | AT2G27110 | 29.223 | 592 | 384 | 11 | 9 | 596 | 48 | 608 | 7.78e-73 | 254 |
| MS.gene87841.t1 | AT4G19990 | 26.531 | 588 | 374 | 8 | 13 | 581 | 24 | 572 | 6.40e-68 | 238 |
| MS.gene87841.t1 | AT4G19990 | 26.531 | 588 | 374 | 8 | 13 | 581 | 24 | 572 | 6.40e-68 | 238 |
| MS.gene87841.t1 | AT4G19990 | 26.531 | 588 | 374 | 8 | 13 | 581 | 24 | 572 | 6.96e-68 | 238 |
| MS.gene87841.t1 | AT4G19990 | 26.531 | 588 | 374 | 8 | 13 | 581 | 24 | 572 | 1.15e-67 | 238 |
| MS.gene87841.t1 | AT4G19990 | 26.531 | 588 | 374 | 8 | 13 | 581 | 24 | 572 | 1.15e-67 | 238 |
| MS.gene87841.t1 | AT4G19990 | 26.531 | 588 | 374 | 8 | 13 | 581 | 38 | 586 | 1.23e-67 | 238 |
| MS.gene87841.t1 | AT2G27110 | 31.106 | 434 | 290 | 6 | 167 | 596 | 35 | 463 | 1.28e-65 | 231 |
| MS.gene87841.t1 | AT4G38170 | 32.010 | 403 | 253 | 9 | 190 | 587 | 24 | 410 | 2.26e-65 | 227 |
| MS.gene87841.t1 | AT4G19990 | 26.449 | 552 | 349 | 7 | 48 | 581 | 3 | 515 | 8.33e-64 | 226 |
| MS.gene87841.t1 | AT1G52520 | 26.224 | 572 | 387 | 11 | 10 | 566 | 85 | 636 | 4.41e-63 | 224 |
| MS.gene87841.t1 | AT2G32250 | 25.484 | 620 | 398 | 11 | 11 | 620 | 39 | 604 | 2.88e-62 | 223 |
| MS.gene87841.t1 | AT2G32250 | 25.484 | 620 | 398 | 11 | 11 | 620 | 39 | 604 | 4.39e-62 | 223 |
| MS.gene87841.t1 | AT2G32250 | 25.484 | 620 | 398 | 11 | 11 | 620 | 39 | 604 | 4.39e-62 | 223 |
| MS.gene87841.t1 | AT2G32250 | 25.484 | 620 | 398 | 11 | 11 | 620 | 39 | 604 | 5.69e-62 | 223 |
| MS.gene87841.t1 | AT2G32250 | 25.484 | 620 | 398 | 11 | 11 | 620 | 39 | 604 | 5.69e-62 | 223 |
| MS.gene87841.t1 | AT2G32250 | 25.484 | 620 | 398 | 11 | 11 | 620 | 39 | 604 | 5.69e-62 | 223 |
| MS.gene87841.t1 | AT2G32250 | 25.284 | 617 | 397 | 11 | 14 | 620 | 1 | 563 | 3.54e-61 | 220 |
| MS.gene87841.t1 | AT2G32250 | 25.284 | 617 | 397 | 11 | 14 | 620 | 1 | 563 | 3.84e-61 | 220 |
| MS.gene87841.t1 | AT1G10240 | 26.056 | 568 | 397 | 10 | 10 | 565 | 48 | 604 | 2.13e-55 | 202 |
| MS.gene87841.t1 | AT1G10240 | 26.056 | 568 | 397 | 10 | 10 | 565 | 48 | 604 | 2.13e-55 | 202 |
| MS.gene87841.t1 | AT1G80010 | 25.424 | 590 | 412 | 12 | 10 | 581 | 95 | 674 | 4.10e-55 | 202 |
| MS.gene87841.t1 | AT5G28530 | 22.621 | 641 | 448 | 11 | 8 | 620 | 53 | 673 | 1.26e-46 | 177 |
| MS.gene87841.t1 | AT5G28530 | 23.631 | 639 | 440 | 13 | 8 | 620 | 53 | 669 | 1.45e-46 | 177 |
| MS.gene87841.t1 | AT5G28530 | 23.631 | 639 | 440 | 13 | 8 | 620 | 53 | 669 | 1.45e-46 | 177 |
| MS.gene87841.t1 | AT5G28530 | 21.111 | 630 | 408 | 12 | 8 | 620 | 53 | 610 | 2.33e-33 | 137 |
| MS.gene87841.t1 | AT5G28530 | 22.134 | 628 | 400 | 14 | 8 | 620 | 53 | 606 | 3.76e-33 | 136 |
Find 112 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTTGTCTGAAACCGAATT+TGG | 0.185399 | 8.4:-62018925 | MS.gene87841:CDS |
| AGACAATTCCATCATTTAAA+TGG | 0.223041 | 8.4:-62019355 | MS.gene87841:CDS |
| TGGAAGAGGCTGAACAATTT+TGG | 0.238942 | 8.4:-62020114 | MS.gene87841:CDS |
| ATAATCTTCACAATAATAAT+TGG | 0.259572 | 8.4:-62019061 | MS.gene87841:CDS |
| CAAAATGTTTGAAGAATTGT+AGG | 0.276339 | 8.4:+62018898 | None:intergenic |
| ATTACACTTTCACGTCAAAA+TGG | 0.279218 | 8.4:-62019908 | MS.gene87841:CDS |
| TGGAATGAAATTTGATACTA+TGG | 0.288067 | 8.4:-62020134 | MS.gene87841:CDS |
| TGATGATGTTACAAATATTC+AGG | 0.293363 | 8.4:-62017776 | MS.gene87841:CDS |
| AACAAATTACAAACGTGTTC+TGG | 0.334571 | 8.4:-62019538 | MS.gene87841:CDS |
| ATGGCTGATGACTCTGGATT+AGG | 0.348989 | 8.4:-62019767 | MS.gene87841:CDS |
| AAATGATCGTACCTCTATAA+TGG | 0.360454 | 8.4:+62019402 | None:intergenic |
| GCATGTTTCTTGAATCCCTT+TGG | 0.367868 | 8.4:+62018216 | None:intergenic |
| GGAATTAAACATCTTGGAAA+TGG | 0.370237 | 8.4:-62019188 | MS.gene87841:CDS |
| TGACATCTTCAAATGTTGAT+TGG | 0.374678 | 8.4:-62020168 | MS.gene87841:CDS |
| CAGAATGGAATTAAACATCT+TGG | 0.376869 | 8.4:-62019194 | MS.gene87841:CDS |
| CTAGTTTGAGCATGTTTACT+TGG | 0.384506 | 8.4:+62018126 | None:intergenic |
| TGGCTGATGACTCTGGATTA+GGG | 0.390441 | 8.4:-62019766 | MS.gene87841:CDS |
| AGGAAAATCATGAAGGATCT+TGG | 0.394084 | 8.4:-62018650 | MS.gene87841:CDS |
| TCAAATTTCATTCCAAGTCT+TGG | 0.395389 | 8.4:+62020142 | None:intergenic |
| GTGTGTATACCTTTCCCATT+TGG | 0.396083 | 8.4:+62018775 | None:intergenic |
| TTCACCAATACTAATCCAAA+TGG | 0.397247 | 8.4:-62018790 | MS.gene87841:CDS |
| GTTTGTCTGAAACCGAATTT+GGG | 0.397918 | 8.4:-62018924 | MS.gene87841:CDS |
| TGTAAGATGTATGATACATT+TGG | 0.401457 | 8.4:-62018585 | MS.gene87841:CDS |
| TTATGTCGCTTAGTTCCCTT+TGG | 0.401911 | 8.4:+62018189 | None:intergenic |
| CCCTAGACATTGCTTGACTT+TGG | 0.402723 | 8.4:+62019273 | None:intergenic |
| TCAAACAACCATTTAAATGA+TGG | 0.407895 | 8.4:+62019347 | None:intergenic |
| TGGTCAGTGAAGATCGTCTT+TGG | 0.409022 | 8.4:+62019293 | None:intergenic |
| TATACCTGTGAATTTCTTTG+AGG | 0.409803 | 8.4:+62018093 | None:intergenic |
| TATAAAATTAACAACTCAAA+TGG | 0.424095 | 8.4:-62017993 | MS.gene87841:CDS |
| TTTCCCATTTGGATTAGTAT+TGG | 0.428381 | 8.4:+62018786 | None:intergenic |
| CTTCTTAAAATATACTTCTC+AGG | 0.433030 | 8.4:+62018507 | None:intergenic |
| GTATTTCCAACAGCAATTGT+TGG | 0.433256 | 8.4:-62019603 | MS.gene87841:CDS |
| AATTGTAGGATACCCAAATT+CGG | 0.433675 | 8.4:+62018912 | None:intergenic |
| TGTCTAGAAATCGAATGTTC+AGG | 0.434178 | 8.4:-62018413 | MS.gene87841:CDS |
| ATCTTGCACAATGCCATAAC+GGG | 0.434412 | 8.4:+62018470 | None:intergenic |
| ATGTAGGTTTGTTTGTTGTA+AGG | 0.436082 | 8.4:-62020014 | MS.gene87841:CDS |
| ACAAGCAAATGAGATTGATA+TGG | 0.437582 | 8.4:-62019786 | MS.gene87841:CDS |
| TTAACAACTCAAATGGTTGA+TGG | 0.439086 | 8.4:-62017986 | MS.gene87841:CDS |
| CCGTTCTAGACTCGGCTCTC+CGG | 0.443682 | 8.4:+62019945 | None:intergenic |
| TCTGGTTTCAACCATTATAG+AGG | 0.443875 | 8.4:-62019413 | MS.gene87841:CDS |
| ATTGATATGGCTGATGACTC+TGG | 0.443968 | 8.4:-62019773 | MS.gene87841:CDS |
| ACCTGTGAATTTCTTTGAGG+TGG | 0.445591 | 8.4:+62018096 | None:intergenic |
| GTTTGAATTGAATGATGTTA+AGG | 0.447594 | 8.4:-62018535 | MS.gene87841:CDS |
| AAAGGAGGTTCTTTGCTAAG+AGG | 0.453456 | 8.4:-62019158 | MS.gene87841:CDS |
| CATAAACCATGGTGAGTCTC+AGG | 0.455966 | 8.4:+62019233 | None:intergenic |
| ATTCGATTTCTAGACAACTT+AGG | 0.457251 | 8.4:+62018420 | None:intergenic |
| ACATGTCCTCACGTGCTAGC+GGG | 0.469336 | 8.4:+62017930 | None:intergenic |
| CCTGTGAATTTCTTTGAGGT+GGG | 0.471695 | 8.4:+62018097 | None:intergenic |
| AATCTTGCACAATGCCATAA+CGG | 0.484556 | 8.4:+62018469 | None:intergenic |
| TTCACAATAATAATTGGATC+AGG | 0.484565 | 8.4:-62019055 | MS.gene87841:CDS |
| GTTTGAGCATGTTTACTTGG+AGG | 0.485005 | 8.4:+62018129 | None:intergenic |
| AGGTTTGTTTGTTGTAAGGA+AGG | 0.486878 | 8.4:-62020010 | MS.gene87841:CDS |
| CATCTTACAACTACAAGTAA+TGG | 0.489617 | 8.4:+62018599 | None:intergenic |
| TGTCGCTTAGTTCCCTTTGG+AGG | 0.489630 | 8.4:+62018192 | None:intergenic |
| TGGACAAGAGAAGCCCGTTA+TGG | 0.496786 | 8.4:-62018483 | MS.gene87841:CDS |
| GTTGATTGGAAGCCAAGACT+TGG | 0.497681 | 8.4:-62020154 | MS.gene87841:CDS |
| CTTGGAAATGGAATGAAGAA+AGG | 0.500755 | 8.4:-62019176 | MS.gene87841:CDS |
| CATGTCCTCACGTGCTAGCG+GGG | 0.504056 | 8.4:+62017931 | None:intergenic |
| CTGGTCATCCATGAGTTTGA+AGG | 0.505313 | 8.4:-62019881 | MS.gene87841:CDS |
| CTTCTTTCATGCATATCAGA+TGG | 0.507819 | 8.4:-62019570 | MS.gene87841:CDS |
| TGAGAAAGCTTGGTTTGACT+TGG | 0.510934 | 8.4:-62019093 | MS.gene87841:CDS |
| TAGTTACACAACTATGATGA+TGG | 0.512138 | 8.4:-62017903 | MS.gene87841:intron |
| ACCAAAGTCAAGCAATGTCT+AGG | 0.513361 | 8.4:-62019274 | MS.gene87841:CDS |
| GATTCTCCAACAATTGCTGT+TGG | 0.523496 | 8.4:+62019597 | None:intergenic |
| GAAATTTGATACTATGGAAG+AGG | 0.525500 | 8.4:-62020128 | MS.gene87841:CDS |
| TTCACGTCAAAATGGAAAGC+TGG | 0.527122 | 8.4:-62019900 | MS.gene87841:CDS |
| TTCTGATGCTATACAACCAA+AGG | 0.531212 | 8.4:-62018232 | MS.gene87841:CDS |
| AGCATGGTGTATGGCGACGC+TGG | 0.534307 | 8.4:-62019638 | MS.gene87841:CDS |
| CAACTTATGAGCACACATGC+AGG | 0.537532 | 8.4:-62019728 | MS.gene87841:CDS |
| AAGAAACATGCTCCTCCAAA+GGG | 0.539093 | 8.4:-62018204 | MS.gene87841:CDS |
| TCACCAATACTAATCCAAAT+GGG | 0.541805 | 8.4:-62018789 | MS.gene87841:CDS |
| TAAGCAATCCGTTCTAGACT+CGG | 0.542410 | 8.4:+62019937 | None:intergenic |
| CAAGAAACATGCTCCTCCAA+AGG | 0.544628 | 8.4:-62018205 | MS.gene87841:CDS |
| ATGGGCTGCATGTTATATGA+AGG | 0.546460 | 8.4:-62019009 | MS.gene87841:CDS |
| CATCTGATATGCATGAAAGA+AGG | 0.546601 | 8.4:+62019571 | None:intergenic |
| TTGTGAATATGTCATCACTA+AGG | 0.547067 | 8.4:-62018670 | MS.gene87841:CDS |
| GAGTCAGATTCATGTCTAGT+TGG | 0.553408 | 8.4:+62018696 | None:intergenic |
| ATGAAGGAAGCATTGACACT+TGG | 0.556729 | 8.4:-62018993 | MS.gene87841:CDS |
| CTGTGAATTTCTTTGAGGTG+GGG | 0.560693 | 8.4:+62018098 | None:intergenic |
| CTCACCATGGTTTATGCACA+TGG | 0.561626 | 8.4:-62019226 | MS.gene87841:CDS |
| AAGTGGTCTATTGGCATCGT+TGG | 0.563557 | 8.4:+62019445 | None:intergenic |
| CCGGAGAGCCGAGTCTAGAA+CGG | 0.566334 | 8.4:-62019945 | MS.gene87841:CDS |
| CGAAATGTTCAAGAAAGCAA+TGG | 0.571716 | 8.4:-62018307 | MS.gene87841:CDS |
| ACACAAGCTATAGAAAATGA+TGG | 0.577177 | 8.4:-62018276 | MS.gene87841:CDS |
| CCCACCTCAAAGAAATTCAC+AGG | 0.578108 | 8.4:-62018097 | MS.gene87841:intron |
| ATCACTAAGGAAAATCATGA+AGG | 0.579406 | 8.4:-62018657 | MS.gene87841:CDS |
| TTCTATGTGATCGAAGCATG+TGG | 0.582014 | 8.4:+62019822 | None:intergenic |
| AATACTAATCCAAATGGGAA+AGG | 0.589514 | 8.4:-62018784 | MS.gene87841:CDS |
| GCAGGGCATAGAGCTAATGT+TGG | 0.592621 | 8.4:-62019710 | MS.gene87841:CDS |
| AACTTATGAGCACACATGCA+GGG | 0.596381 | 8.4:-62019727 | MS.gene87841:CDS |
| CCAAAGTCAAGCAATGTCTA+GGG | 0.598556 | 8.4:-62019273 | MS.gene87841:CDS |
| TCTGATGCTATACAACCAAA+GGG | 0.598723 | 8.4:-62018231 | MS.gene87841:CDS |
| TGTTTCTAAGTTCATTAGAG+CGG | 0.599783 | 8.4:-62018385 | MS.gene87841:CDS |
| GCATCAGAACTCACAAATGA+CGG | 0.601171 | 8.4:+62018246 | None:intergenic |
| ACGGCGATGTATCGTCATGT+AGG | 0.604688 | 8.4:-62020030 | MS.gene87841:CDS |
| AACATGTCCTCACGTGCTAG+CGG | 0.607345 | 8.4:+62017929 | None:intergenic |
| TGACTCTGGATTAGGGCAGA+AGG | 0.608129 | 8.4:-62019759 | MS.gene87841:CDS |
| TTTGTTGTAAGGAAGGACTA+CGG | 0.614427 | 8.4:-62020003 | MS.gene87841:CDS |
| GGCATCGTTGGTACAATATG+TGG | 0.617702 | 8.4:+62019457 | None:intergenic |
| ACATGGCACTTGTTGCAGAA+TGG | 0.627403 | 8.4:-62019209 | MS.gene87841:CDS |
| ATGTCCTCACGTGCTAGCGG+GGG | 0.629467 | 8.4:+62017932 | None:intergenic |
| GGAAATGGAATGAAGAAAGG+AGG | 0.638695 | 8.4:-62019173 | MS.gene87841:CDS |
| TAAGCTTGCAAGCTTATGTG+AGG | 0.646632 | 8.4:+62018824 | None:intergenic |
| TGATATGCATGAAAGAAGGA+CGG | 0.649185 | 8.4:+62019575 | None:intergenic |
| CACTATTATCAAGAAGCATG+AGG | 0.669252 | 8.4:+62018334 | None:intergenic |
| TCTATGTGATCGAAGCATGT+GGG | 0.671774 | 8.4:+62019823 | None:intergenic |
| ATATTTGTAACATCATCAAG+AGG | 0.673556 | 8.4:+62017781 | None:intergenic |
| GGGCTCATAAGTTGGAGGCG+CGG | 0.683549 | 8.4:+62017952 | None:intergenic |
| TAATGTTGGATATACAGAAG+TGG | 0.683641 | 8.4:-62019696 | MS.gene87841:CDS |
| TTTACAAACAAGAACAAACA+CGG | 0.696353 | 8.4:-62020049 | MS.gene87841:CDS |
| GTGATGCCTGAGACTCACCA+TGG | 0.716138 | 8.4:-62019239 | MS.gene87841:CDS |
| AGTGCCATGTGCATAAACCA+TGG | 0.773388 | 8.4:+62019222 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAATAATTAATATCC+AGG | + | chr8.4:62020087-62020106 | None:intergenic | 10.0% |
| !!! | TTATTTCTTATTATTAATGT+AGG | - | chr8.4:62020128-62020147 | MS.gene87841:CDS | 10.0% |
| !! | ATAATCTTCACAATAATAAT+TGG | - | chr8.4:62018873-62018892 | MS.gene87841:CDS | 15.0% |
| !! | TATAAAATTAACAACTCAAA+TGG | - | chr8.4:62019941-62019960 | MS.gene87841:CDS | 15.0% |
| !! | TTATGCCATTAAAAAAAAAT+GGG | - | chr8.4:62018907-62018926 | MS.gene87841:CDS | 15.0% |
| !! | TTTATGCCATTAAAAAAAAA+TGG | - | chr8.4:62018906-62018925 | MS.gene87841:CDS | 15.0% |
| !!! | TAGTTTTACATAATCATTTT+AGG | - | chr8.4:62019917-62019936 | MS.gene87841:CDS | 15.0% |
| !!! | AATTTCATATCATTTTCATG+AGG | - | chr8.4:62020055-62020074 | MS.gene87841:CDS | 20.0% |
| ! | AGACAATTCCATCATTTAAA+TGG | - | chr8.4:62018579-62018598 | MS.gene87841:CDS | 25.0% |
| ! | ATATTTGTAACATCATCAAG+AGG | + | chr8.4:62020156-62020175 | None:intergenic | 25.0% |
| ! | CAAAATGTTTGAAGAATTGT+AGG | + | chr8.4:62019039-62019058 | None:intergenic | 25.0% |
| ! | CTTCTTAAAATATACTTCTC+AGG | + | chr8.4:62019430-62019449 | None:intergenic | 25.0% |
| ! | GAGAAAAAATATGCATATGA+AGG | - | chr8.4:62017960-62017979 | MS.gene87841:CDS | 25.0% |
| ! | GTTTGAATTGAATGATGTTA+AGG | - | chr8.4:62019399-62019418 | MS.gene87841:CDS | 25.0% |
| ! | TACAAAAAGAAAAAGAAGCA+TGG | - | chr8.4:62018280-62018299 | MS.gene87841:CDS | 25.0% |
| ! | TCAAACAACCATTTAAATGA+TGG | + | chr8.4:62018590-62018609 | None:intergenic | 25.0% |
| ! | TGGAATGAAATTTGATACTA+TGG | - | chr8.4:62017800-62017819 | MS.gene87841:intron | 25.0% |
| ! | TGTAAGATGTATGATACATT+TGG | - | chr8.4:62019349-62019368 | MS.gene87841:CDS | 25.0% |
| ! | TTCACAATAATAATTGGATC+AGG | - | chr8.4:62018879-62018898 | MS.gene87841:CDS | 25.0% |
| ! | TTTACAAACAAGAACAAACA+CGG | - | chr8.4:62017885-62017904 | MS.gene87841:intron | 25.0% |
| !! | CAAAAATGATTTTGGATTAC+GGG | - | chr8.4:62018426-62018445 | MS.gene87841:CDS | 25.0% |
| !! | GCAAAAATGATTTTGGATTA+CGG | - | chr8.4:62018425-62018444 | MS.gene87841:CDS | 25.0% |
| !! | TGATGATGTTACAAATATTC+AGG | - | chr8.4:62020158-62020177 | MS.gene87841:CDS | 25.0% |
| !!! | AGAAGTATATTTTAAGAAGG+TGG | - | chr8.4:62019431-62019450 | MS.gene87841:CDS | 25.0% |
| !!! | CTGAGAAGTATATTTTAAGA+AGG | - | chr8.4:62019428-62019447 | MS.gene87841:CDS | 25.0% |
| AAAAAAAGCAAGTGGTCTAT+TGG | + | chr8.4:62018501-62018520 | None:intergenic | 30.0% | |
| AAACCAGAAAAAAAAGCAAG+TGG | + | chr8.4:62018509-62018528 | None:intergenic | 30.0% | |
| AAATGATCGTACCTCTATAA+TGG | + | chr8.4:62018535-62018554 | None:intergenic | 30.0% | |
| AACAAATTACAAACGTGTTC+TGG | - | chr8.4:62018396-62018415 | MS.gene87841:CDS | 30.0% | |
| AATACTAATCCAAATGGGAA+AGG | - | chr8.4:62019150-62019169 | MS.gene87841:CDS | 30.0% | |
| AATTGTAGGATACCCAAATT+CGG | + | chr8.4:62019025-62019044 | None:intergenic | 30.0% | |
| ACAAGCAAATGAGATTGATA+TGG | - | chr8.4:62018148-62018167 | MS.gene87841:CDS | 30.0% | |
| ACACAAGCTATAGAAAATGA+TGG | - | chr8.4:62019658-62019677 | MS.gene87841:CDS | 30.0% | |
| ATCACTAAGGAAAATCATGA+AGG | - | chr8.4:62019277-62019296 | MS.gene87841:CDS | 30.0% | |
| ATGCATATGAAGGAAAAATC+CGG | - | chr8.4:62017970-62017989 | MS.gene87841:CDS | 30.0% | |
| ATTACACTTTCACGTCAAAA+TGG | - | chr8.4:62018026-62018045 | MS.gene87841:intron | 30.0% | |
| CAGAATGGAATTAAACATCT+TGG | - | chr8.4:62018740-62018759 | MS.gene87841:CDS | 30.0% | |
| CATCTTACAACTACAAGTAA+TGG | + | chr8.4:62019338-62019357 | None:intergenic | 30.0% | |
| GAAATTTGATACTATGGAAG+AGG | - | chr8.4:62017806-62017825 | MS.gene87841:intron | 30.0% | |
| GGAATTAAACATCTTGGAAA+TGG | - | chr8.4:62018746-62018765 | MS.gene87841:CDS | 30.0% | |
| TAATGTTGGATATACAGAAG+TGG | - | chr8.4:62018238-62018257 | MS.gene87841:CDS | 30.0% | |
| TAGTTACACAACTATGATGA+TGG | - | chr8.4:62020031-62020050 | MS.gene87841:CDS | 30.0% | |
| TATACCTGTGAATTTCTTTG+AGG | + | chr8.4:62019844-62019863 | None:intergenic | 30.0% | |
| TCAAATTTCATTCCAAGTCT+TGG | + | chr8.4:62017795-62017814 | None:intergenic | 30.0% | |
| TCACCAATACTAATCCAAAT+GGG | - | chr8.4:62019145-62019164 | MS.gene87841:CDS | 30.0% | |
| TGACATCTTCAAATGTTGAT+TGG | - | chr8.4:62017766-62017785 | MS.gene87841:CDS | 30.0% | |
| TTAACAACTCAAATGGTTGA+TGG | - | chr8.4:62019948-62019967 | MS.gene87841:CDS | 30.0% | |
| TTCACCAATACTAATCCAAA+TGG | - | chr8.4:62019144-62019163 | MS.gene87841:CDS | 30.0% | |
| TTGTGAATATGTCATCACTA+AGG | - | chr8.4:62019264-62019283 | MS.gene87841:CDS | 30.0% | |
| ! | ATTCGATTTCTAGACAACTT+AGG | + | chr8.4:62019517-62019536 | None:intergenic | 30.0% |
| ! | ATTTTGGATTACGGGTATTT+TGG | - | chr8.4:62018434-62018453 | MS.gene87841:CDS | 30.0% |
| ! | GTGTGATGCAAAAATGATTT+TGG | - | chr8.4:62018418-62018437 | MS.gene87841:CDS | 30.0% |
| ! | TATGTTTTCCTTCAAACTCA+TGG | + | chr8.4:62018064-62018083 | None:intergenic | 30.0% |
| ! | TGTTTCTAAGTTCATTAGAG+CGG | - | chr8.4:62019549-62019568 | MS.gene87841:CDS | 30.0% |
| !! | ATGTAGGTTTGTTTGTTGTA+AGG | - | chr8.4:62017920-62017939 | MS.gene87841:CDS | 30.0% |
| !! | TATAGAGGTACGATCATTTT+TGG | - | chr8.4:62018536-62018555 | MS.gene87841:CDS | 30.0% |
| !! | TTTCCCATTTGGATTAGTAT+TGG | + | chr8.4:62019151-62019170 | None:intergenic | 30.0% |
| !!! | TGCAGCCCATTTTTTTTTAA+TGG | + | chr8.4:62018915-62018934 | None:intergenic | 30.0% |
| !!! | TTTTGGTGATGTTGTTTCAT+TGG | - | chr8.4:62018451-62018470 | MS.gene87841:CDS | 30.0% |
| AATCTTGCACAATGCCATAA+CGG | + | chr8.4:62019468-62019487 | None:intergenic | 35.0% | |
| AGGAAAATCATGAAGGATCT+TGG | - | chr8.4:62019284-62019303 | MS.gene87841:CDS | 35.0% | |
| CATCTGATATGCATGAAAGA+AGG | + | chr8.4:62018366-62018385 | None:intergenic | 35.0% | |
| CGAAATGTTCAAGAAAGCAA+TGG | - | chr8.4:62019627-62019646 | MS.gene87841:CDS | 35.0% | |
| CTAGTTTGAGCATGTTTACT+TGG | + | chr8.4:62019811-62019830 | None:intergenic | 35.0% | |
| CTTCTTTCATGCATATCAGA+TGG | - | chr8.4:62018364-62018383 | MS.gene87841:CDS | 35.0% | |
| CTTGGAAATGGAATGAAGAA+AGG | - | chr8.4:62018758-62018777 | MS.gene87841:CDS | 35.0% | |
| GTATTTCCAACAGCAATTGT+TGG | - | chr8.4:62018331-62018350 | MS.gene87841:CDS | 35.0% | |
| TCTGATGCTATACAACCAAA+GGG | - | chr8.4:62019703-62019722 | MS.gene87841:CDS | 35.0% | |
| TGATATGCATGAAAGAAGGA+CGG | + | chr8.4:62018362-62018381 | None:intergenic | 35.0% | |
| TGTCTAGAAATCGAATGTTC+AGG | - | chr8.4:62019521-62019540 | MS.gene87841:CDS | 35.0% | |
| TTCTGATGCTATACAACCAA+AGG | - | chr8.4:62019702-62019721 | MS.gene87841:CDS | 35.0% | |
| ! | AGAAAAAGAAGCATGGTGTA+TGG | - | chr8.4:62018287-62018306 | MS.gene87841:CDS | 35.0% |
| ! | AGTTTGTCTGAAACCGAATT+TGG | - | chr8.4:62019009-62019028 | MS.gene87841:CDS | 35.0% |
| ! | ATGGCATTGTGCAAGATTTT+AGG | - | chr8.4:62019470-62019489 | MS.gene87841:CDS | 35.0% |
| ! | CACTATTATCAAGAAGCATG+AGG | + | chr8.4:62019603-62019622 | None:intergenic | 35.0% |
| ! | GTTTGTCTGAAACCGAATTT+GGG | - | chr8.4:62019010-62019029 | MS.gene87841:CDS | 35.0% |
| ! | TCTGGTTTCAACCATTATAG+AGG | - | chr8.4:62018521-62018540 | MS.gene87841:CDS | 35.0% |
| ! | TGGCATTGTGCAAGATTTTA+GGG | - | chr8.4:62019471-62019490 | MS.gene87841:CDS | 35.0% |
| ! | TTTGTTGTAAGGAAGGACTA+CGG | - | chr8.4:62017931-62017950 | MS.gene87841:CDS | 35.0% |
| !! | AAGCAGATTTTGAGAAAGCT+TGG | - | chr8.4:62018831-62018850 | MS.gene87841:CDS | 35.0% |
| !! | AGGTTTGTTTGTTGTAAGGA+AGG | - | chr8.4:62017924-62017943 | MS.gene87841:CDS | 35.0% |
| !! | TCTCTCGTTTTAGTAGATCA+TGG | + | chr8.4:62018088-62018107 | None:intergenic | 35.0% |
| !!! | AGACCACTTGCTTTTTTTTC+TGG | - | chr8.4:62018503-62018522 | MS.gene87841:CDS | 35.0% |
| !!! | GAACAATTTTGGCTAGCTTA+CGG | - | chr8.4:62017831-62017850 | MS.gene87841:intron | 35.0% |
| AAAGGAGGTTCTTTGCTAAG+AGG | - | chr8.4:62018776-62018795 | MS.gene87841:CDS | 40.0% | |
| AACTTATGAGCACACATGCA+GGG | - | chr8.4:62018207-62018226 | MS.gene87841:CDS | 40.0% | |
| AAGAAACATGCTCCTCCAAA+GGG | - | chr8.4:62019730-62019749 | MS.gene87841:CDS | 40.0% | |
| ACCAAAGTCAAGCAATGTCT+AGG | - | chr8.4:62018660-62018679 | MS.gene87841:CDS | 40.0% | |
| ATCTTGCACAATGCCATAAC+GGG | + | chr8.4:62019467-62019486 | None:intergenic | 40.0% | |
| ATTGATATGGCTGATGACTC+TGG | - | chr8.4:62018161-62018180 | MS.gene87841:CDS | 40.0% | |
| CCAAAGTCAAGCAATGTCTA+GGG | - | chr8.4:62018661-62018680 | MS.gene87841:CDS | 40.0% | |
| GAGTCAGATTCATGTCTAGT+TGG | + | chr8.4:62019241-62019260 | None:intergenic | 40.0% | |
| GATTCTCCAACAATTGCTGT+TGG | + | chr8.4:62018340-62018359 | None:intergenic | 40.0% | |
| GCATCAGAACTCACAAATGA+CGG | + | chr8.4:62019691-62019710 | None:intergenic | 40.0% | |
| GCATGTTTCTTGAATCCCTT+TGG | + | chr8.4:62019721-62019740 | None:intergenic | 40.0% | |
| GGAAATGGAATGAAGAAAGG+AGG | - | chr8.4:62018761-62018780 | MS.gene87841:CDS | 40.0% | |
| GTGTGTATACCTTTCCCATT+TGG | + | chr8.4:62019162-62019181 | None:intergenic | 40.0% | |
| GTTTGAGCATGTTTACTTGG+AGG | + | chr8.4:62019808-62019827 | None:intergenic | 40.0% | |
| TAAGCTTGCAAGCTTATGTG+AGG | + | chr8.4:62019113-62019132 | None:intergenic | 40.0% | |
| TCTATGTGATCGAAGCATGT+GGG | + | chr8.4:62018114-62018133 | None:intergenic | 40.0% | |
| TTCACGTCAAAATGGAAAGC+TGG | - | chr8.4:62018034-62018053 | MS.gene87841:intron | 40.0% | |
| TTCTATGTGATCGAAGCATG+TGG | + | chr8.4:62018115-62018134 | None:intergenic | 40.0% | |
| ! | ACCTGTGAATTTCTTTGAGG+TGG | + | chr8.4:62019841-62019860 | None:intergenic | 40.0% |
| ! | ATGGGCTGCATGTTATATGA+AGG | - | chr8.4:62018925-62018944 | MS.gene87841:CDS | 40.0% |
| ! | ATTTTCATGAGGAACTGTCC+TGG | - | chr8.4:62020066-62020085 | MS.gene87841:CDS | 40.0% |
| ! | GGCATTGTGCAAGATTTTAG+GGG | - | chr8.4:62019472-62019491 | MS.gene87841:CDS | 40.0% |
| ! | TAAGCAATCCGTTCTAGACT+CGG | + | chr8.4:62018000-62018019 | None:intergenic | 40.0% |
| ! | TGAGAAAGCTTGGTTTGACT+TGG | - | chr8.4:62018841-62018860 | MS.gene87841:CDS | 40.0% |
| ! | TGGAAGAGGCTGAACAATTT+TGG | - | chr8.4:62017820-62017839 | MS.gene87841:intron | 40.0% |
| ! | TTATGTCGCTTAGTTCCCTT+TGG | + | chr8.4:62019748-62019767 | None:intergenic | 40.0% |
| !! | ATGAAGGAAGCATTGACACT+TGG | - | chr8.4:62018941-62018960 | MS.gene87841:CDS | 40.0% |
| !! | CCTGTGAATTTCTTTGAGGT+GGG | + | chr8.4:62019840-62019859 | None:intergenic | 40.0% |
| !! | CTGTGAATTTCTTTGAGGTG+GGG | + | chr8.4:62019839-62019858 | None:intergenic | 40.0% |
| !! | TGTGCAAGATTTTAGGGGAA+AGG | - | chr8.4:62019477-62019496 | MS.gene87841:CDS | 40.0% |
| !!! | TTTTCTTAGGTTGACGCTCA+AGG | + | chr8.4:62019777-62019796 | None:intergenic | 40.0% |
| AAGTGGTCTATTGGCATCGT+TGG | + | chr8.4:62018492-62018511 | None:intergenic | 45.0% | |
| AGTGCCATGTGCATAAACCA+TGG | + | chr8.4:62018715-62018734 | None:intergenic | 45.0% | |
| ATGGCTGATGACTCTGGATT+AGG | - | chr8.4:62018167-62018186 | MS.gene87841:CDS | 45.0% | |
| CAACTTATGAGCACACATGC+AGG | - | chr8.4:62018206-62018225 | MS.gene87841:CDS | 45.0% | |
| CAAGAAACATGCTCCTCCAA+AGG | - | chr8.4:62019729-62019748 | MS.gene87841:CDS | 45.0% | |
| CATAAACCATGGTGAGTCTC+AGG | + | chr8.4:62018704-62018723 | None:intergenic | 45.0% | |
| CCCACCTCAAAGAAATTCAC+AGG | - | chr8.4:62019837-62019856 | MS.gene87841:CDS | 45.0% | |
| CCCTAGACATTGCTTGACTT+TGG | + | chr8.4:62018664-62018683 | None:intergenic | 45.0% | |
| CTCACCATGGTTTATGCACA+TGG | - | chr8.4:62018708-62018727 | MS.gene87841:CDS | 45.0% | |
| CTGGTCATCCATGAGTTTGA+AGG | - | chr8.4:62018053-62018072 | MS.gene87841:intron | 45.0% | |
| GGCATCGTTGGTACAATATG+TGG | + | chr8.4:62018480-62018499 | None:intergenic | 45.0% | |
| GTTGATTGGAAGCCAAGACT+TGG | - | chr8.4:62017780-62017799 | MS.gene87841:CDS | 45.0% | |
| TGGCTGATGACTCTGGATTA+GGG | - | chr8.4:62018168-62018187 | MS.gene87841:CDS | 45.0% | |
| TGGTCAGTGAAGATCGTCTT+TGG | + | chr8.4:62018644-62018663 | None:intergenic | 45.0% | |
| ! | ACATGGCACTTGTTGCAGAA+TGG | - | chr8.4:62018725-62018744 | MS.gene87841:CDS | 45.0% |
| ! | CTAGCTTACGGTTTTCGTGA+GGG | - | chr8.4:62017843-62017862 | MS.gene87841:intron | 45.0% |
| !! | GCAAGATTTTAGGGGAAAGG+AGG | - | chr8.4:62019480-62019499 | MS.gene87841:CDS | 45.0% |
| !!! | GGAGGAGCACTTCTTTTCTT+AGG | + | chr8.4:62019790-62019809 | None:intergenic | 45.0% |
| AACATGTCCTCACGTGCTAG+CGG | + | chr8.4:62020008-62020027 | None:intergenic | 50.0% | |
| ACGGCGATGTATCGTCATGT+AGG | - | chr8.4:62017904-62017923 | MS.gene87841:CDS | 50.0% | |
| GCAGGGCATAGAGCTAATGT+TGG | - | chr8.4:62018224-62018243 | MS.gene87841:CDS | 50.0% | |
| TGGACAAGAGAAGCCCGTTA+TGG | - | chr8.4:62019451-62019470 | MS.gene87841:CDS | 50.0% | |
| ! | TACGGTTTTCGTGAGGGCTT+CGG | - | chr8.4:62017849-62017868 | MS.gene87841:intron | 50.0% |
| ! | TGACTCTGGATTAGGGCAGA+AGG | - | chr8.4:62018175-62018194 | MS.gene87841:CDS | 50.0% |
| ! | TGTCGCTTAGTTCCCTTTGG+AGG | + | chr8.4:62019745-62019764 | None:intergenic | 50.0% |
| !! | GCTAGCTTACGGTTTTCGTG+AGG | - | chr8.4:62017842-62017861 | MS.gene87841:intron | 50.0% |
| ACATGTCCTCACGTGCTAGC+GGG | + | chr8.4:62020007-62020026 | None:intergenic | 55.0% | |
| GTGATGCCTGAGACTCACCA+TGG | - | chr8.4:62018695-62018714 | MS.gene87841:CDS | 55.0% | |
| AGCATGGTGTATGGCGACGC+TGG | - | chr8.4:62018296-62018315 | MS.gene87841:CDS | 60.0% | |
| ATGTCCTCACGTGCTAGCGG+GGG | + | chr8.4:62020005-62020024 | None:intergenic | 60.0% | |
| CATGTCCTCACGTGCTAGCG+GGG | + | chr8.4:62020006-62020025 | None:intergenic | 60.0% | |
| CCGGAGAGCCGAGTCTAGAA+CGG | - | chr8.4:62017989-62018008 | MS.gene87841:CDS | 60.0% | |
| GCTAGCGGGGGCTCATAAGT+TGG | + | chr8.4:62019993-62020012 | None:intergenic | 60.0% | |
| ! | AGCGGGGGCTCATAAGTTGG+AGG | + | chr8.4:62019990-62020009 | None:intergenic | 60.0% |
| ! | CCGTTCTAGACTCGGCTCTC+CGG | + | chr8.4:62017992-62018011 | None:intergenic | 60.0% |
| ! | GGGCTCATAAGTTGGAGGCG+CGG | + | chr8.4:62019985-62020004 | None:intergenic | 60.0% |
| TGAGCCCCCGCTAGCACGTG+AGG | - | chr8.4:62019998-62020017 | MS.gene87841:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 62017765 | 62020191 | 62017765 | ID=MS.gene87841 |
| chr8.4 | mRNA | 62017765 | 62020191 | 62017765 | ID=MS.gene87841.t1;Parent=MS.gene87841 |
| chr8.4 | exon | 62018098 | 62020191 | 62018098 | ID=MS.gene87841.t1.exon1;Parent=MS.gene87841.t1 |
| chr8.4 | CDS | 62018098 | 62020191 | 62018098 | ID=cds.MS.gene87841.t1;Parent=MS.gene87841.t1 |
| chr8.4 | exon | 62017904 | 62018017 | 62017904 | ID=MS.gene87841.t1.exon2;Parent=MS.gene87841.t1 |
| chr8.4 | CDS | 62017904 | 62018017 | 62017904 | ID=cds.MS.gene87841.t1;Parent=MS.gene87841.t1 |
| chr8.4 | exon | 62017765 | 62017806 | 62017765 | ID=MS.gene87841.t1.exon3;Parent=MS.gene87841.t1 |
| chr8.4 | CDS | 62017765 | 62017806 | 62017765 | ID=cds.MS.gene87841.t1;Parent=MS.gene87841.t1 |
| Gene Sequence |
| Protein sequence |
