AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene87998

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87998.t1 MTR_4g029540 97.635 296 7 0 1 296 1 296 0.0 595
MS.gene87998.t1 MTR_8g006470 45.791 297 135 5 1 292 1 276 1.78e-67 212
MS.gene87998.t1 MTR_3g052450 49.219 128 54 2 10 127 40 166 1.95e-37 139
MS.gene87998.t1 MTR_3g052430 54.206 107 48 1 10 116 41 146 1.90e-36 137
MS.gene87998.t1 MTR_1g021230 54.386 114 50 2 10 122 57 169 2.45e-36 135
MS.gene87998.t1 MTR_8g042410 45.638 149 74 4 2 145 25 171 1.52e-35 134
MS.gene87998.t1 MTR_5g029840 50.833 120 50 3 10 121 12 130 2.04e-34 127
MS.gene87998.t1 MTR_1g085640 47.518 141 68 4 10 147 12 149 8.93e-34 127
MS.gene87998.t1 MTR_7g115650 51.852 108 51 1 6 113 8 114 9.34e-34 122
MS.gene87998.t1 MTR_3g011610 49.533 107 53 1 10 116 37 142 1.00e-33 129
MS.gene87998.t1 MTR_8g017500 51.754 114 54 1 10 123 12 124 1.04e-33 126
MS.gene87998.t1 MTR_5g007370 53.846 104 47 1 10 113 12 114 3.57e-33 124
MS.gene87998.t1 MTR_8g017440 40.805 174 92 3 10 174 12 183 7.85e-33 124
MS.gene87998.t1 MTR_7g110830 55.140 107 47 1 10 116 12 117 1.23e-32 124
MS.gene87998.t1 MTR_4g082230 43.796 137 75 2 6 141 8 143 1.24e-32 124
MS.gene87998.t1 MTR_2g089620 47.541 122 60 3 6 124 8 128 1.25e-32 122
MS.gene87998.t1 MTR_1g062940 53.211 109 49 2 8 115 4 111 1.99e-32 119
MS.gene87998.t1 MTR_3g074520 50.962 104 50 1 10 113 12 114 2.75e-32 122
MS.gene87998.t1 MTR_6g012690 50.000 104 51 1 10 113 12 114 3.95e-32 122
MS.gene87998.t1 MTR_2g011660 50.000 108 52 2 10 116 13 119 5.69e-32 121
MS.gene87998.t1 MTR_0140s0030 49.074 108 54 1 6 113 9 115 6.69e-32 121
MS.gene87998.t1 MTR_0489s0020 49.074 108 54 1 6 113 9 115 6.69e-32 121
MS.gene87998.t1 MTR_4g105130 43.151 146 78 3 10 151 12 156 8.53e-32 121
MS.gene87998.t1 MTR_4g478180 50.000 104 51 1 10 113 13 115 1.09e-31 120
MS.gene87998.t1 MTR_7g010210 49.038 104 52 1 10 113 12 114 1.24e-31 119
MS.gene87998.t1 MTR_4g082290 43.066 137 76 2 6 141 8 143 1.33e-31 121
MS.gene87998.t1 MTR_4g094982 56.863 102 42 2 12 113 5 104 1.35e-31 119
MS.gene87998.t1 MTR_7g011170 50.000 108 53 1 6 113 8 114 1.58e-31 119
MS.gene87998.t1 MTR_8g017540 50.877 114 55 1 10 123 58 170 1.67e-31 121
MS.gene87998.t1 MTR_7g010210 49.038 104 52 1 10 113 12 114 1.88e-31 119
MS.gene87998.t1 MTR_7g035075 36.095 169 93 4 10 170 14 175 2.29e-31 116
MS.gene87998.t1 MTR_7g096930 46.903 113 58 2 6 117 8 119 2.39e-31 118
MS.gene87998.t1 MTR_7g087130 41.791 134 77 1 6 139 8 140 2.74e-31 119
MS.gene87998.t1 MTR_2g096380 33.188 229 141 4 10 233 6 227 3.08e-31 117
MS.gene87998.t1 MTR_2g099740 50.000 114 56 1 10 123 12 124 3.24e-31 120
MS.gene87998.t1 MTR_3g039990 47.321 112 57 2 6 116 9 119 3.65e-31 118
MS.gene87998.t1 MTR_1g086530 47.664 107 55 1 10 116 33 138 3.67e-31 117
MS.gene87998.t1 MTR_5g088080 33.077 260 157 10 11 265 13 260 3.82e-31 117
MS.gene87998.t1 MTR_5g088150 33.077 260 157 10 11 265 13 260 3.82e-31 117
MS.gene87998.t1 MTR_5g488210 33.077 260 157 10 11 265 13 260 3.82e-31 117
MS.gene87998.t1 MTR_1g085040 44.231 156 80 4 10 161 12 164 4.12e-31 119
MS.gene87998.t1 MTR_8g017340 55.660 106 43 3 10 113 12 115 4.13e-31 121
MS.gene87998.t1 MTR_2g064160 51.923 104 49 1 10 113 11 113 4.82e-31 118
MS.gene87998.t1 MTR_2g088170 55.455 110 48 1 7 116 26 134 5.09e-31 120
MS.gene87998.t1 MTR_5g010020 51.000 100 48 1 10 109 12 110 5.40e-31 119
MS.gene87998.t1 MTR_1g043050 43.077 130 72 2 6 134 8 136 7.47e-31 116
MS.gene87998.t1 MTR_8g017390 50.862 116 53 3 10 123 12 125 7.50e-31 120
MS.gene87998.t1 MTR_4g091490 49.074 108 53 2 10 116 13 119 8.94e-31 118
MS.gene87998.t1 MTR_6g006030 46.154 104 55 1 10 113 14 116 1.50e-30 114
MS.gene87998.t1 MTR_7g076740 39.264 163 92 4 10 166 12 173 2.02e-30 116
MS.gene87998.t1 MTR_1g073170 43.443 122 64 2 11 132 21 137 2.26e-30 115
MS.gene87998.t1 MTR_5g488170 35.577 208 127 6 11 217 13 214 2.32e-30 115
MS.gene87998.t1 MTR_5g016510 50.000 126 59 3 12 135 5 128 2.53e-30 116
MS.gene87998.t1 MTR_6g012180 49.000 100 50 1 10 109 12 110 3.06e-30 116
MS.gene87998.t1 MTR_1g043080 46.296 108 57 1 6 113 8 114 3.64e-30 114
MS.gene87998.t1 MTR_1g086510 45.370 108 57 2 3 110 15 120 4.70e-30 114
MS.gene87998.t1 MTR_8g098860 46.789 109 57 1 10 118 12 119 6.70e-30 115
MS.gene87998.t1 MTR_2g097910 46.957 115 60 1 10 124 20 133 6.72e-30 115
MS.gene87998.t1 MTR_1g100653 45.946 111 59 1 6 116 8 117 6.95e-30 115
MS.gene87998.t1 MTR_5g088640 40.237 169 94 6 11 178 13 175 7.50e-30 114
MS.gene87998.t1 MTR_2g067420 48.571 105 53 1 6 110 10 113 7.98e-30 115
MS.gene87998.t1 MTR_1g112760 50.962 104 50 1 10 113 13 115 1.00e-29 112
MS.gene87998.t1 MTR_8g017350 53.774 106 45 3 10 113 12 115 1.03e-29 118
MS.gene87998.t1 MTR_3g077110 51.923 104 49 1 10 113 12 114 1.41e-29 115
MS.gene87998.t1 MTR_1g100667 52.427 103 48 1 11 113 14 115 2.48e-29 112
MS.gene87998.t1 MTR_0251s0050 48.624 109 54 2 10 117 13 120 2.59e-29 112
MS.gene87998.t1 MTR_8g095390 45.528 123 64 2 6 128 8 127 2.71e-29 114
MS.gene87998.t1 MTR_5g079670 44.355 124 65 2 10 133 11 130 4.93e-29 110
MS.gene87998.t1 MTR_1g110460 41.441 111 64 1 6 116 22 131 5.29e-29 112
MS.gene87998.t1 MTR_8g031360 52.381 105 48 2 10 113 13 116 5.30e-29 112
MS.gene87998.t1 MTR_1g076150 47.222 108 56 1 6 113 8 114 5.43e-29 111
MS.gene87998.t1 MTR_1g045610 46.729 107 56 1 11 117 22 127 7.05e-29 111
MS.gene87998.t1 MTR_0008s0280 44.643 112 61 1 5 116 7 117 8.91e-29 110
MS.gene87998.t1 MTR_7g111290 53.535 99 45 1 10 108 12 109 9.95e-29 113
MS.gene87998.t1 MTR_4g063100 48.246 114 56 2 11 122 8 120 1.01e-28 110
MS.gene87998.t1 MTR_0063s0090 45.455 121 63 2 5 123 7 126 1.08e-28 110
MS.gene87998.t1 MTR_4g065017 45.833 120 64 1 10 129 17 135 1.24e-28 112
MS.gene87998.t1 MTR_4g073420 42.188 128 71 2 6 131 8 134 1.48e-28 111
MS.gene87998.t1 MTR_5g062790 37.433 187 105 7 11 195 10 186 1.69e-28 111
MS.gene87998.t1 MTR_3g461490 48.148 108 55 1 6 113 8 114 1.78e-28 112
MS.gene87998.t1 MTR_5g042030 45.833 120 61 3 10 126 7 125 1.80e-28 110
MS.gene87998.t1 MTR_7g102110 47.706 109 55 2 6 113 8 115 1.91e-28 110
MS.gene87998.t1 MTR_4g057635 37.629 194 91 7 10 193 12 185 2.12e-28 111
MS.gene87998.t1 MTR_2g095520 49.524 105 51 2 6 109 8 111 2.38e-28 111
MS.gene87998.t1 MTR_5g088610 50.467 107 51 2 11 116 10 115 3.09e-28 111
MS.gene87998.t1 MTR_4g485530 50.000 104 50 2 12 114 14 116 3.43e-28 107
MS.gene87998.t1 MTR_8g027345 46.789 109 56 2 10 117 12 119 4.05e-28 110
MS.gene87998.t1 MTR_0008s0390 43.846 130 67 3 10 138 13 137 7.68e-28 108
MS.gene87998.t1 MTR_2g089450 38.667 150 90 2 10 158 12 160 7.86e-28 108
MS.gene87998.t1 MTR_4g019370 50.000 102 49 2 12 113 38 137 1.22e-27 110
MS.gene87998.t1 MTR_5g078140 44.186 129 65 2 10 138 12 133 1.40e-27 109
MS.gene87998.t1 MTR_3g097450 34.031 191 114 4 6 189 8 193 1.71e-27 108
MS.gene87998.t1 MTR_3g028740 50.000 104 51 1 10 113 22 124 1.84e-27 109
MS.gene87998.t1 MTR_3g065440 49.038 104 52 1 10 113 12 114 2.21e-27 108
MS.gene87998.t1 MTR_6g090405 45.872 109 57 2 6 113 8 115 3.21e-27 107
MS.gene87998.t1 MTR_1g017000 41.667 132 64 3 10 129 12 142 3.49e-27 106
MS.gene87998.t1 MTR_6g055910 46.087 115 61 1 1 115 5 118 5.07e-27 107
MS.gene87998.t1 MTR_1g017140 47.706 109 55 2 6 113 8 115 5.32e-27 108
MS.gene87998.t1 MTR_6g009430 43.511 131 70 3 10 137 12 141 6.68e-27 107
MS.gene87998.t1 MTR_2g034790 40.288 139 79 3 6 142 8 144 8.35e-27 107
MS.gene87998.t1 MTR_3g101290 50.980 102 48 2 12 113 37 136 1.00e-26 104
MS.gene87998.t1 MTR_0008s0470 46.154 104 55 1 10 113 13 115 1.76e-26 105
MS.gene87998.t1 MTR_1g083630 47.748 111 56 2 10 119 12 121 1.80e-26 109
MS.gene87998.t1 MTR_4g121460 43.269 104 58 1 10 113 12 114 2.86e-26 106
MS.gene87998.t1 MTR_4g102380 47.115 104 54 1 10 113 12 114 3.89e-26 104
MS.gene87998.t1 MTR_5g014990 46.789 109 56 2 6 113 8 115 4.36e-26 105
MS.gene87998.t1 MTR_5g049190 47.788 113 53 4 10 119 17 126 5.38e-26 103
MS.gene87998.t1 MTR_4g100720 45.545 101 54 1 10 110 13 112 7.05e-26 101
MS.gene87998.t1 MTR_7g117730 41.667 108 62 1 10 117 12 118 1.14e-25 102
MS.gene87998.t1 MTR_3g103570 44.954 109 58 2 6 113 8 115 1.43e-25 104
MS.gene87998.t1 MTR_3g083540 42.373 118 64 2 10 124 41 157 1.79e-25 103
MS.gene87998.t1 MTR_4g097570 47.115 104 53 2 6 108 8 110 1.81e-25 103
MS.gene87998.t1 MTR_2g089420 44.037 109 59 2 10 117 11 118 3.30e-25 104
MS.gene87998.t1 MTR_3g463400 50.980 102 48 2 12 113 133 232 4.71e-25 104
MS.gene87998.t1 MTR_6g015455 55.208 96 41 2 12 107 5 98 1.19e-24 104
MS.gene87998.t1 MTR_4g097570 46.667 105 53 3 6 108 8 111 2.31e-24 100
MS.gene87998.t1 MTR_8g020490 45.000 100 54 1 10 109 8 106 2.94e-24 99.0
MS.gene87998.t1 MTR_4g125520 36.220 127 76 2 10 132 12 137 3.04e-24 100
MS.gene87998.t1 MTR_4g128670 45.714 105 55 2 6 109 8 111 4.01e-24 100
MS.gene87998.t1 MTR_1g026870 45.872 109 57 2 10 118 83 189 4.31e-24 102
MS.gene87998.t1 MTR_2g033170 42.991 107 60 1 10 116 24 129 7.82e-24 99.4
MS.gene87998.t1 MTR_3g110028 44.954 109 58 2 10 118 83 189 9.65e-24 101
MS.gene87998.t1 MTR_8g060940 45.098 102 55 1 8 109 5 105 1.37e-23 97.1
MS.gene87998.t1 MTR_4g088015 45.192 104 55 2 10 113 219 320 1.72e-23 99.8
MS.gene87998.t1 MTR_5g070020 45.098 102 54 2 12 113 122 221 2.26e-23 98.6
MS.gene87998.t1 MTR_7g451170 36.025 161 88 5 12 170 191 338 3.29e-23 98.6
MS.gene87998.t1 MTR_7g109320 48.148 108 55 1 6 113 8 114 3.84e-23 97.8
MS.gene87998.t1 MTR_4g105660 44.444 108 58 2 6 113 174 279 4.16e-23 98.6
MS.gene87998.t1 MTR_4g123040 42.056 107 61 1 10 116 24 129 5.83e-23 96.7
MS.gene87998.t1 MTR_5g078950 45.000 100 54 1 10 109 7 105 6.50e-23 95.5
MS.gene87998.t1 MTR_7g061330 48.077 104 52 2 10 113 111 212 7.91e-23 98.6
MS.gene87998.t1 MTR_7g461410 48.077 104 52 2 10 113 111 212 7.91e-23 98.6
MS.gene87998.t1 MTR_7g061330 48.077 104 52 2 10 113 75 176 1.00e-22 98.2
MS.gene87998.t1 MTR_2g096380 32.308 195 120 4 44 233 21 208 1.02e-22 94.0
MS.gene87998.t1 MTR_5g082910 48.077 104 52 2 6 109 13 114 1.24e-22 95.5
MS.gene87998.t1 MTR_0197s0010 35.333 150 77 2 14 144 5 153 1.98e-22 93.6
MS.gene87998.t1 MTR_5g078910 43.269 104 58 1 10 113 7 109 3.76e-22 94.4
MS.gene87998.t1 MTR_7g037260 33.149 181 99 6 10 190 143 301 4.44e-22 95.1
MS.gene87998.t1 MTR_5g079290 42.609 115 63 3 1 114 9 121 4.58e-22 93.2
MS.gene87998.t1 MTR_5g078930 44.118 102 56 1 11 112 10 110 4.68e-22 92.0
MS.gene87998.t1 MTR_1g085880 40.000 160 82 6 10 157 11 168 4.91e-22 91.7
MS.gene87998.t1 MTR_4g128190 38.994 159 77 6 10 164 11 153 5.50e-22 92.4
MS.gene87998.t1 MTR_7g035350 32.979 188 114 6 15 201 228 404 1.54e-21 94.4
MS.gene87998.t1 MTR_3g077650 44.118 102 55 2 12 113 181 280 1.91e-21 94.0
MS.gene87998.t1 MTR_1g085770 40.000 160 82 6 10 157 11 168 1.93e-21 92.4
MS.gene87998.t1 MTR_7g017260 44.660 103 54 2 10 110 25 126 2.67e-21 91.3
MS.gene87998.t1 MTR_5g079220 42.609 115 63 3 1 114 13 125 2.80e-21 91.3
MS.gene87998.t1 MTR_0001s0360 42.574 101 57 1 10 110 7 106 3.19e-21 90.9
MS.gene87998.t1 MTR_4g063100 53.086 81 35 2 44 122 12 91 3.30e-21 90.1
MS.gene87998.t1 MTR_6g074860 44.762 105 56 2 12 116 4 106 4.47e-21 90.1
MS.gene87998.t1 MTR_5g079120 41.818 110 62 2 4 113 56 163 5.69e-21 91.3
MS.gene87998.t1 MTR_5g007300 53.846 78 35 1 10 87 64 140 1.19e-20 86.3
MS.gene87998.t1 MTR_7g037130 29.688 192 109 6 1 190 134 301 1.43e-20 90.9
MS.gene87998.t1 MTR_1g057980 35.669 157 93 5 10 163 78 229 1.55e-20 89.7
MS.gene87998.t1 MTR_0193s0090 40.385 104 61 1 10 113 7 109 2.35e-20 87.4
MS.gene87998.t1 MTR_0247s0040 43.000 100 56 1 10 109 7 105 4.22e-20 85.9
MS.gene87998.t1 MTR_5g078800 42.609 115 62 3 4 116 2 114 4.70e-20 87.8
MS.gene87998.t1 MTR_7g450950 33.333 150 86 4 12 157 157 296 6.53e-20 88.6
MS.gene87998.t1 MTR_5g041570 41.085 129 60 4 12 126 134 260 9.96e-20 89.0
MS.gene87998.t1 MTR_5g078860 41.739 115 63 3 4 116 2 114 1.63e-19 87.0
MS.gene87998.t1 MTR_4g082040 43.590 117 61 3 3 116 93 207 2.68e-19 87.8
MS.gene87998.t1 MTR_6g055910 50.588 85 36 2 36 115 6 89 5.29e-19 84.7
MS.gene87998.t1 MTR_7g111290 58.462 65 26 1 44 108 4 67 7.28e-19 85.5
MS.gene87998.t1 MTR_3g045430 39.623 106 63 1 8 113 11 115 9.53e-19 84.7
MS.gene87998.t1 MTR_7g061550 41.346 104 58 2 15 116 10 112 3.78e-18 84.0
MS.gene87998.t1 MTR_5g010650 43.878 98 53 2 10 107 108 203 9.91e-18 83.6
MS.gene87998.t1 MTR_6g027370 40.000 105 61 2 12 116 99 201 1.11e-17 82.4
MS.gene87998.t1 MTR_6g027360 37.500 112 68 2 5 116 71 180 1.68e-17 81.3
MS.gene87998.t1 MTR_3g089045 45.714 105 55 2 12 116 16 118 2.82e-17 80.5
MS.gene87998.t1 MTR_6g027340 39.048 105 62 2 12 116 16 118 2.84e-17 79.0
MS.gene87998.t1 MTR_7g086960 44.643 112 57 3 8 116 82 191 4.35e-17 80.9
MS.gene87998.t1 MTR_8g468380 37.864 103 62 2 15 117 25 125 4.18e-16 78.6
MS.gene87998.t1 MTR_5g038910 39.394 99 58 2 15 113 29 125 4.67e-15 75.5
MS.gene87998.t1 MTR_5g038910 39.394 99 58 2 15 113 29 125 6.35e-15 74.7
MS.gene87998.t1 MTR_0023s0210 39.744 78 46 1 10 87 7 83 1.24e-11 60.1
MS.gene87998.t1 MTR_2g096380 26.506 166 111 3 73 233 5 164 6.76e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87998.t1 AT3G60460 41.613 310 138 7 4 292 5 292 4.90e-62 199
MS.gene87998.t1 AT4G26930 51.613 124 57 3 10 132 19 140 5.80e-37 135
MS.gene87998.t1 AT5G06100 54.206 107 48 1 10 116 32 137 6.10e-37 137
MS.gene87998.t1 AT5G06100 54.206 107 48 1 10 116 32 137 2.12e-36 136
MS.gene87998.t1 AT5G06100 54.206 107 48 1 10 116 32 137 2.12e-36 136
MS.gene87998.t1 AT5G06100 54.206 107 48 1 10 116 32 137 2.12e-36 136
MS.gene87998.t1 AT5G06100 54.206 107 48 1 10 116 32 137 2.12e-36 136
MS.gene87998.t1 AT3G11440 51.351 111 53 1 6 116 37 146 3.25e-36 135
MS.gene87998.t1 AT3G11440 51.351 111 53 1 6 116 37 146 1.54e-35 134
MS.gene87998.t1 AT3G11440 51.351 111 53 1 6 116 37 146 1.54e-35 134
MS.gene87998.t1 AT3G11440 51.351 111 53 1 6 116 37 146 1.54e-35 134
MS.gene87998.t1 AT5G55020 52.336 107 50 1 10 116 26 131 1.18e-34 132
MS.gene87998.t1 AT2G32460 50.467 107 52 1 10 116 6 111 4.80e-34 129
MS.gene87998.t1 AT2G32460 50.467 107 52 1 10 116 18 123 4.92e-34 129
MS.gene87998.t1 AT2G26960 53.333 105 48 1 12 116 22 125 1.55e-33 127
MS.gene87998.t1 AT1G34670 50.962 104 50 1 10 113 12 114 1.69e-32 123
MS.gene87998.t1 AT3G13890 54.808 104 46 1 10 113 12 114 1.88e-32 123
MS.gene87998.t1 AT4G21440 49.180 122 58 3 6 124 8 128 2.91e-32 122
MS.gene87998.t1 AT4G28110 47.541 122 60 3 6 124 8 128 3.00e-32 120
MS.gene87998.t1 AT4G01680 53.271 107 49 1 10 116 12 117 4.67e-32 119
MS.gene87998.t1 AT3G27810 36.905 168 100 3 10 174 20 184 4.82e-32 119
MS.gene87998.t1 AT5G65230 50.962 104 50 1 10 113 12 114 6.73e-32 120
MS.gene87998.t1 AT5G15310 50.000 104 51 1 10 113 12 114 1.18e-31 118
MS.gene87998.t1 AT4G01680 53.271 107 49 1 10 116 12 117 1.30e-31 120
MS.gene87998.t1 AT5G26660 53.271 107 49 1 10 116 12 117 1.35e-31 120
MS.gene87998.t1 AT3G01530 42.063 126 69 2 6 131 21 142 1.67e-31 117
MS.gene87998.t1 AT3G12720 47.967 123 63 1 10 132 22 143 3.32e-31 119
MS.gene87998.t1 AT5G54230 50.000 104 51 1 10 113 12 114 3.63e-31 119
MS.gene87998.t1 AT5G15310 50.000 104 51 1 10 113 12 114 3.82e-31 119
MS.gene87998.t1 AT1G57560 46.212 132 67 3 10 138 12 142 4.14e-31 118
MS.gene87998.t1 AT1G63910 50.467 107 52 1 10 116 12 117 4.21e-31 119
MS.gene87998.t1 AT5G15310 50.000 104 51 1 10 113 12 114 4.27e-31 118
MS.gene87998.t1 AT1G08810 50.962 104 50 1 10 113 12 114 5.00e-31 117
MS.gene87998.t1 AT1G74650 48.148 108 55 1 6 113 8 114 5.06e-31 119
MS.gene87998.t1 AT3G28910 46.296 108 57 1 6 113 8 114 5.29e-31 118
MS.gene87998.t1 AT3G61250 41.892 148 71 3 10 143 12 158 5.73e-31 118
MS.gene87998.t1 AT3G30210 43.066 137 70 2 11 147 28 156 7.19e-31 117
MS.gene87998.t1 AT1G57560 44.776 134 70 3 10 140 12 144 7.34e-31 117
MS.gene87998.t1 AT3G02940 49.057 106 52 2 10 114 12 116 8.52e-31 117
MS.gene87998.t1 AT5G59780 48.696 115 56 2 11 123 9 122 9.02e-31 115
MS.gene87998.t1 AT4G05100 50.000 106 51 2 10 114 13 117 1.07e-30 117
MS.gene87998.t1 AT3G01140 47.222 108 56 1 6 113 8 114 1.13e-30 118
MS.gene87998.t1 AT3G47600 48.077 104 53 1 10 113 12 114 1.20e-30 117
MS.gene87998.t1 AT3G46130 49.565 115 55 2 11 123 10 123 1.20e-30 116
MS.gene87998.t1 AT3G50060 57.843 102 41 2 12 113 6 105 1.22e-30 117
MS.gene87998.t1 AT3G02940 49.057 106 52 2 10 114 12 116 1.27e-30 117
MS.gene87998.t1 AT3G02940 49.057 106 52 2 10 114 12 116 1.27e-30 117
MS.gene87998.t1 AT5G62470 47.222 108 56 1 6 113 8 114 1.45e-30 118
MS.gene87998.t1 AT1G79180 47.458 118 60 2 10 126 14 130 1.47e-30 116
MS.gene87998.t1 AT3G01140 47.222 108 56 1 6 113 51 157 1.90e-30 118
MS.gene87998.t1 AT1G09540 52.885 104 48 1 10 113 12 114 2.19e-30 117
MS.gene87998.t1 AT1G16490 50.962 104 50 1 10 113 14 116 2.27e-30 115
MS.gene87998.t1 AT5G16770 49.057 106 52 2 10 114 12 116 3.47e-30 116
MS.gene87998.t1 AT5G16770 49.057 106 52 2 10 114 12 116 3.47e-30 116
MS.gene87998.t1 AT2G47190 45.370 108 58 1 10 117 20 126 3.90e-30 115
MS.gene87998.t1 AT5G16770 49.057 106 52 2 10 114 12 116 4.60e-30 116
MS.gene87998.t1 AT5G16770 49.057 106 52 2 10 114 12 116 4.60e-30 116
MS.gene87998.t1 AT5G40350 45.192 104 56 1 10 113 17 119 4.97e-30 113
MS.gene87998.t1 AT3G13890 50.442 113 46 2 10 113 12 123 5.60e-30 116
MS.gene87998.t1 AT4G09460 42.754 138 74 4 6 142 8 141 8.75e-30 113
MS.gene87998.t1 AT1G48000 47.525 101 52 1 10 110 32 131 1.47e-29 112
MS.gene87998.t1 AT1G18570 44.928 138 68 4 10 147 13 142 1.52e-29 115
MS.gene87998.t1 AT2G31180 44.248 113 61 2 6 117 8 119 1.95e-29 112
MS.gene87998.t1 AT3G23250 41.353 133 76 2 6 137 8 139 2.32e-29 113
MS.gene87998.t1 AT5G10280 49.038 104 52 1 10 113 12 114 2.51e-29 114
MS.gene87998.t1 AT3G55730 56.863 102 42 2 12 113 56 155 2.82e-29 115
MS.gene87998.t1 AT5G62470 47.222 108 55 2 6 113 8 113 2.95e-29 114
MS.gene87998.t1 AT1G56160 46.296 108 57 1 6 113 10 116 3.05e-29 113
MS.gene87998.t1 AT5G61420 35.533 197 101 6 10 201 12 187 3.34e-29 114
MS.gene87998.t1 AT5G67300 56.863 102 42 2 12 113 6 105 3.52e-29 113
MS.gene87998.t1 AT1G35515 48.624 109 53 3 6 113 8 114 3.53e-29 110
MS.gene87998.t1 AT4G34990 48.148 108 55 1 6 113 8 114 3.56e-29 112
MS.gene87998.t1 AT3G24310 43.411 129 65 3 6 134 15 135 3.63e-29 112
MS.gene87998.t1 AT3G48920 52.427 103 48 1 11 113 19 120 3.68e-29 112
MS.gene87998.t1 AT4G38620 36.667 180 99 5 6 175 8 182 4.66e-29 112
MS.gene87998.t1 AT1G22640 47.222 108 56 1 6 113 8 114 8.63e-29 111
MS.gene87998.t1 AT5G07690 46.667 105 55 1 10 114 12 115 9.29e-29 112
MS.gene87998.t1 AT5G60890 50.000 104 51 1 10 113 12 114 1.09e-28 111
MS.gene87998.t1 AT3G53200 48.673 113 55 2 10 120 9 120 1.13e-28 110
MS.gene87998.t1 AT4G37780 49.524 105 51 2 10 113 12 115 1.84e-28 111
MS.gene87998.t1 AT5G57620 48.624 109 54 2 6 113 8 115 1.89e-28 112
MS.gene87998.t1 AT4G01680 48.739 119 48 3 10 116 12 129 2.09e-28 112
MS.gene87998.t1 AT5G23000 50.467 107 50 3 10 114 12 117 2.21e-28 111
MS.gene87998.t1 AT4G13480 47.573 103 53 1 11 113 7 108 2.38e-28 110
MS.gene87998.t1 AT2G16720 48.624 109 53 3 6 113 8 114 3.73e-28 109
MS.gene87998.t1 AT2G47460 44.915 118 64 1 6 123 8 124 4.03e-28 111
MS.gene87998.t1 AT5G07700 48.077 104 53 1 10 113 12 114 4.52e-28 111
MS.gene87998.t1 AT5G07700 48.077 104 53 1 10 113 12 114 4.52e-28 111
MS.gene87998.t1 AT4G37260 53.922 102 45 2 12 113 13 112 4.72e-28 110
MS.gene87998.t1 AT4G17785 48.077 104 53 1 10 113 13 115 5.13e-28 111
MS.gene87998.t1 AT4G17785 48.077 104 53 1 10 113 13 115 5.59e-28 111
MS.gene87998.t1 AT1G18710 44.262 122 64 3 10 128 12 132 9.12e-28 108
MS.gene87998.t1 AT1G06180 45.370 108 58 1 6 113 8 114 9.38e-28 108
MS.gene87998.t1 AT3G12820 48.148 108 55 1 6 113 10 116 9.48e-28 107
MS.gene87998.t1 AT1G66230 45.968 124 63 2 10 130 12 134 1.28e-27 108
MS.gene87998.t1 AT2G23290 53.922 102 45 2 12 113 13 112 1.42e-27 109
MS.gene87998.t1 AT5G49330 46.296 108 57 1 6 113 8 114 1.65e-27 109
MS.gene87998.t1 AT1G68320 42.056 107 61 1 10 116 19 124 2.76e-27 107
MS.gene87998.t1 AT5G56110 46.296 108 57 1 6 113 8 114 2.82e-27 108
MS.gene87998.t1 AT1G25340 43.396 106 59 1 11 116 19 123 3.70e-27 107
MS.gene87998.t1 AT5G16600 44.776 134 67 3 10 137 12 144 4.14e-27 108
MS.gene87998.t1 AT5G14340 42.982 114 64 1 10 123 24 136 6.19e-27 106
MS.gene87998.t1 AT2G36890 44.037 109 59 2 6 113 8 115 6.91e-27 107
MS.gene87998.t1 AT3G08500 50.000 104 51 1 10 113 30 132 6.91e-27 107
MS.gene87998.t1 AT5G12870 48.148 108 54 2 10 116 18 124 8.75e-27 106
MS.gene87998.t1 AT3G13540 42.063 126 69 3 10 132 23 147 9.00e-27 105
MS.gene87998.t1 AT4G22680 49.038 104 52 1 10 113 12 114 1.01e-26 105
MS.gene87998.t1 AT4G25560 48.544 103 52 1 11 113 11 112 1.19e-26 106
MS.gene87998.t1 AT2G36890 44.037 109 59 2 6 113 49 156 1.27e-26 107
MS.gene87998.t1 AT5G52600 45.370 108 58 1 2 109 4 110 1.47e-26 103
MS.gene87998.t1 AT4G18770 40.940 149 84 4 3 149 208 354 1.48e-26 108
MS.gene87998.t1 AT3G49690 46.552 116 60 2 6 120 8 122 1.95e-26 106
MS.gene87998.t1 AT3G28470 49.038 104 52 1 6 109 8 110 2.13e-26 106
MS.gene87998.t1 AT1G74430 43.333 120 64 3 10 126 12 130 3.05e-26 104
MS.gene87998.t1 AT5G14750 48.000 100 51 1 11 110 17 115 3.50e-26 102
MS.gene87998.t1 AT5G35550 37.419 155 90 4 7 159 11 160 3.82e-26 104
MS.gene87998.t1 AT4G12350 45.902 122 60 3 10 127 12 131 5.16e-26 104
MS.gene87998.t1 AT3G62610 43.220 118 66 1 6 123 8 124 5.18e-26 105
MS.gene87998.t1 AT2G26950 45.192 104 56 1 12 115 18 120 5.21e-26 106
MS.gene87998.t1 AT5G40330 44.545 110 60 1 1 110 3 111 8.08e-26 102
MS.gene87998.t1 AT5G65790 45.690 116 61 2 6 120 8 122 1.26e-25 105
MS.gene87998.t1 AT1G79180 37.179 156 61 4 6 126 10 163 1.32e-25 104
MS.gene87998.t1 AT1G74080 46.154 104 55 1 10 113 12 114 1.38e-25 104
MS.gene87998.t1 AT2G39880 51.961 102 47 2 12 113 50 149 1.47e-25 104
MS.gene87998.t1 AT3G27920 42.400 125 62 3 11 126 15 138 6.17e-25 100
MS.gene87998.t1 AT5G11050 43.697 119 63 3 10 126 103 219 8.42e-25 103
MS.gene87998.t1 AT1G25340 42.453 106 55 2 11 116 19 118 1.38e-24 100
MS.gene87998.t1 AT5G52260 47.009 117 60 2 11 126 13 128 1.54e-24 100
MS.gene87998.t1 AT3G09230 50.000 102 49 2 12 113 55 154 2.57e-24 101
MS.gene87998.t1 AT1G25340 42.453 106 55 2 11 116 19 118 2.87e-24 100
MS.gene87998.t1 AT5G62320 45.946 111 52 2 10 113 13 122 4.53e-24 98.2
MS.gene87998.t1 AT3G06490 45.794 107 57 1 10 116 19 124 1.17e-23 99.0
MS.gene87998.t1 AT5G49620 46.154 104 55 1 10 113 26 128 1.21e-23 98.6
MS.gene87998.t1 AT5G58850 45.946 111 56 3 12 120 105 213 2.07e-23 99.8
MS.gene87998.t1 AT5G02320 44.628 121 62 3 10 127 65 183 3.84e-23 99.4
MS.gene87998.t1 AT5G02320 44.628 121 62 3 10 127 125 243 4.08e-23 99.4
MS.gene87998.t1 AT5G02320 44.628 121 62 3 10 127 125 243 4.08e-23 99.4
MS.gene87998.t1 AT5G40360 42.727 110 61 2 6 115 152 259 8.24e-23 97.1
MS.gene87998.t1 AT4G32730 44.545 110 58 3 10 118 85 192 2.22e-22 97.8
MS.gene87998.t1 AT4G32730 44.545 110 58 3 10 118 85 192 2.22e-22 97.8
MS.gene87998.t1 AT4G32730 44.545 110 58 3 10 118 85 192 2.22e-22 97.8
MS.gene87998.t1 AT4G32730 44.545 110 58 3 10 118 85 192 2.22e-22 97.8
MS.gene87998.t1 AT4G32730 44.545 110 58 3 10 118 85 192 2.38e-22 97.4
MS.gene87998.t1 AT3G27810 38.060 134 77 3 44 174 5 135 2.63e-22 91.7
MS.gene87998.t1 AT3G46130 52.874 87 38 2 39 123 6 91 3.57e-22 92.8
MS.gene87998.t1 AT1G66370 35.859 198 99 7 10 182 8 202 3.96e-22 93.2
MS.gene87998.t1 AT5G59780 54.878 82 34 2 44 123 21 101 4.14e-22 92.4
MS.gene87998.t1 AT3G09370 45.794 107 56 2 12 118 135 239 4.80e-22 96.3
MS.gene87998.t1 AT5G26660 58.904 73 29 1 44 116 15 86 4.84e-22 94.4
MS.gene87998.t1 AT3G09370 45.794 107 56 2 12 118 130 234 5.61e-22 95.9
MS.gene87998.t1 AT3G09370 45.794 107 56 2 12 118 143 247 6.55e-22 95.9
MS.gene87998.t1 AT5G11510 41.284 109 62 2 10 118 79 185 7.07e-22 96.3
MS.gene87998.t1 AT5G11510 41.284 109 62 2 10 118 79 185 7.07e-22 96.3
MS.gene87998.t1 AT5G11510 41.284 109 62 2 10 118 79 185 7.07e-22 96.3
MS.gene87998.t1 AT3G46130 54.878 82 34 2 44 123 21 101 7.09e-22 92.0
MS.gene87998.t1 AT5G11510 41.284 109 62 2 10 118 79 185 8.42e-22 95.9
MS.gene87998.t1 AT5G11510 41.284 109 62 2 10 118 79 185 8.64e-22 95.9
MS.gene87998.t1 AT3G27785 41.667 108 61 2 6 113 183 288 1.48e-21 94.4
MS.gene87998.t1 AT1G66380 45.000 100 54 1 10 109 8 106 1.99e-21 88.6
MS.gene87998.t1 AT3G29020 44.762 105 56 2 12 116 65 167 2.24e-21 90.9
MS.gene87998.t1 AT3G29020 44.762 105 56 2 12 116 67 169 3.22e-21 91.7
MS.gene87998.t1 AT1G56650 44.554 101 55 1 10 110 8 107 5.97e-21 90.1
MS.gene87998.t1 AT5G40350 51.429 70 33 1 44 113 6 74 3.35e-20 85.9
MS.gene87998.t1 AT5G49620 40.678 118 55 2 10 113 26 142 3.66e-20 89.0
MS.gene87998.t1 AT3G53200 53.165 79 34 2 44 120 10 87 9.41e-20 85.9
MS.gene87998.t1 AT1G69560 44.554 101 54 2 7 107 102 200 1.05e-19 87.8
MS.gene87998.t1 AT1G69560 44.554 101 54 2 7 107 118 216 1.18e-19 88.2
MS.gene87998.t1 AT1G26780 39.683 126 61 3 10 122 96 219 1.91e-19 87.8
MS.gene87998.t1 AT1G26780 39.683 126 61 3 10 122 96 219 1.98e-19 86.3
MS.gene87998.t1 AT4G33450 41.935 124 65 4 11 131 18 137 2.03e-19 85.9
MS.gene87998.t1 AT1G66390 42.574 101 57 1 10 110 8 107 2.59e-19 85.5
MS.gene87998.t1 AT5G17800 42.241 116 62 3 12 124 93 206 3.13e-19 86.7
MS.gene87998.t1 AT3G12820 55.882 68 29 1 46 113 2 68 3.37e-19 84.0
MS.gene87998.t1 AT2G25230 38.793 116 67 4 10 124 24 136 5.08e-19 84.3
MS.gene87998.t1 AT3G47600 52.857 70 32 1 44 113 40 108 6.40e-19 85.9
MS.gene87998.t1 AT1G17950 43.810 105 54 3 12 113 5 107 6.62e-19 84.3
MS.gene87998.t1 AT5G35550 41.525 118 62 4 44 159 51 163 2.05e-18 83.2
MS.gene87998.t1 AT4G00540 45.045 111 55 4 10 116 101 209 8.89e-18 83.2
MS.gene87998.t1 AT4G00540 45.045 111 55 4 10 116 99 207 1.46e-17 82.8
MS.gene87998.t1 AT2G37630 41.346 104 58 2 15 116 7 109 3.49e-17 81.3
MS.gene87998.t1 AT5G39700 38.793 116 69 2 1 116 45 158 5.82e-17 77.8
MS.gene87998.t1 AT1G73410 44.762 105 53 3 12 113 6 108 6.56e-17 79.0
MS.gene87998.t1 AT1G73410 44.762 105 53 3 12 113 6 108 7.24e-17 77.8
MS.gene87998.t1 AT5G14750 52.308 65 30 1 46 110 18 81 3.11e-16 75.1
MS.gene87998.t1 AT5G40430 37.500 112 67 3 10 121 52 160 6.95e-16 76.3
MS.gene87998.t1 AT2G02820 32.877 146 76 4 15 160 33 156 1.29e-14 74.3
MS.gene87998.t1 AT2G02820 32.877 146 76 4 15 160 33 156 1.29e-14 73.6
MS.gene87998.t1 AT2G02820 32.877 146 76 4 15 160 33 156 1.68e-14 73.9
MS.gene87998.t1 AT1G14350 36.449 107 66 2 15 121 28 132 3.65e-14 72.8
MS.gene87998.t1 AT1G14350 36.449 107 66 2 15 121 28 132 3.65e-14 72.8
MS.gene87998.t1 AT1G66380 51.515 66 31 1 44 109 9 73 8.66e-13 63.9
MS.gene87998.t1 AT1G66380 36.735 98 60 2 10 106 8 104 1.91e-12 63.2
MS.gene87998.t1 AT3G23250 40.964 83 47 2 56 137 1 82 3.24e-12 65.5
MS.gene87998.t1 AT1G22640 50.000 58 28 1 56 113 1 57 2.20e-11 62.4
MS.gene87998.t1 AT3G18100 38.144 97 58 2 11 107 545 639 5.21e-11 63.5
MS.gene87998.t1 AT3G18100 38.144 97 58 2 11 107 384 478 5.29e-11 63.5
MS.gene87998.t1 AT3G18100 38.144 97 58 2 11 107 497 591 5.36e-11 63.5
MS.gene87998.t1 AT3G18100 38.144 97 58 2 11 107 332 426 5.41e-11 63.5
MS.gene87998.t1 AT5G59780 48.148 54 26 1 72 123 4 57 6.59e-11 60.5

Find 70 sgRNAs with CRISPR-Local

Find 133 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCAAATATGTAGCAATTT+TGG 0.139113 4.3:-70220499 None:intergenic
CTCAAACATGTCCATAAAAT+TGG 0.140060 4.3:-70221364 None:intergenic
GGCCAAAATTGCTACATATT+TGG 0.140847 4.3:+70220497 MS.gene87998:CDS
TACTTACCCAACTTCTTATA+TGG 0.155167 4.3:+70221113 MS.gene87998:CDS
ATTGAACTACAGGGCCAATT+TGG 0.210428 4.3:+70220465 MS.gene87998:CDS
TTTGGAGTAGCAGGAGAAAA+AGG 0.243245 4.3:+70220550 MS.gene87998:CDS
TTAGTTCACTTTCCAAATTT+TGG 0.243837 4.3:-70221191 None:intergenic
TTGTGTTTCTGCTGCTTTGA+TGG 0.256433 4.3:-70220606 None:intergenic
AAAGCCAAACTACCAAAATT+TGG 0.257129 4.3:+70221179 MS.gene87998:CDS
TGGCCCATTTGTTCCCAAAT+TGG 0.264545 4.3:-70220479 None:intergenic
AAGTTCAAACTGCTTCTTTC+AGG 0.270783 4.3:+70221473 MS.gene87998:CDS
GGAAAGTCCATCTGTGATTC+AGG 0.284117 4.3:-70221297 None:intergenic
TTGAAACATGTTAACAAATA+TGG 0.313597 4.3:+70219527 MS.gene87998:CDS
TAGTTTGGCTTTGTTAAATC+TGG 0.332623 4.3:-70221168 None:intergenic
AGCTGATTTGAACCACATTC+AGG 0.362249 4.3:-70221078 None:intergenic
TCAAACATGTCCATAAAATT+GGG 0.364368 4.3:-70221363 None:intergenic
AGTTCTTGGCAAAAGACCTT+TGG 0.382985 4.3:-70219576 None:intergenic
GAAAATCATGTCGGTTAAGA+TGG 0.389252 4.3:+70219600 MS.gene87998:CDS
AATTTGGAAAGTGAACTAAA+TGG 0.393704 4.3:+70221195 MS.gene87998:CDS
ACTTACCCAACTTCTTATAT+GGG 0.406058 4.3:+70221114 MS.gene87998:CDS
TGCTGCTTTGATGGTGGTGA+TGG 0.407537 4.3:-70220597 None:intergenic
AGGGCCAATTTGGGAACAAA+TGG 0.408226 4.3:+70220475 MS.gene87998:CDS
ACAAATATGGTCCTAGAGAT+TGG 0.416347 4.3:+70219540 MS.gene87998:CDS
AAGGGTGGTGATTGAACTAC+AGG 0.423925 4.3:+70220455 MS.gene87998:CDS
AAATGGAATTATTGAGTTTG+AGG 0.424108 4.3:+70221212 MS.gene87998:CDS
TTGAACTACAGGGCCAATTT+GGG 0.426312 4.3:+70220466 MS.gene87998:CDS
TTGCCAAGTCTTGGACTTGA+AGG 0.435753 4.3:+70221435 MS.gene87998:CDS
TGAACAAGGTCTTGGCACTC+TGG 0.436596 4.3:-70221327 None:intergenic
TGTTTCCCATATAAGAAGTT+GGG 0.440519 4.3:-70221119 None:intergenic
GTCCATAAAATTGGGGTCAA+AGG 0.440887 4.3:-70221355 None:intergenic
TCTTGGCACTCTGGGAATAG+TGG 0.453927 4.3:-70221318 None:intergenic
TCCATAAAATTGGGGTCAAA+GGG 0.456231 4.3:-70221354 None:intergenic
TTGTTTCCCATATAAGAAGT+TGG 0.464251 4.3:-70221120 None:intergenic
GATGGTGGTGATGGTGTCCT+TGG 0.466017 4.3:-70220588 None:intergenic
GGAACTAGGTTGCCAAGTCT+TGG 0.466768 4.3:+70221426 MS.gene87998:CDS
AAATCAAGTAAAAGTTGAAA+AGG 0.470372 4.3:+70220644 MS.gene87998:CDS
CTATTTCAGGTTCCTGAATG+TGG 0.476424 4.3:+70221066 MS.gene87998:intron
AGGGATCTTGAACAAGGTCT+TGG 0.494997 4.3:-70221335 None:intergenic
CAAAAGACCTTTGGATCGAA+TGG 0.500376 4.3:-70219567 None:intergenic
AGTGTTTGGAGCAAGAAGAA+TGG 0.502724 4.3:+70221405 MS.gene87998:CDS
TTCATTAGAGGAAGAAAGGG+TGG 0.503576 4.3:+70220440 MS.gene87998:CDS
ATCTGTGATTCAGGGAGTAA+TGG 0.504206 4.3:-70221288 None:intergenic
GAACAAGGTCTTGGCACTCT+GGG 0.512429 4.3:-70221326 None:intergenic
CGAATGGAGCTCCAATCTCT+AGG 0.517393 4.3:-70219551 None:intergenic
ATCAAAGCAGCAGAAACACA+AGG 0.531957 4.3:+70220608 MS.gene87998:CDS
AAAATTGCTACATATTTGGA+AGG 0.543315 4.3:+70220501 MS.gene87998:CDS
TCATCTTCTTCACTACTCCA+TGG 0.545375 4.3:-70219497 None:intergenic
TGTTTCTGCTGCTTTGATGG+TGG 0.546809 4.3:-70220603 None:intergenic
GGGCCAATTTGGGAACAAAT+GGG 0.547359 4.3:+70220476 MS.gene87998:CDS
TTTCCTTCAAGTCCAAGACT+TGG 0.558372 4.3:-70221438 None:intergenic
TTGGCTTTGTTAAATCTGGA+AGG 0.560135 4.3:-70221164 None:intergenic
ATGGAAAGAGAATATGAAAG+AGG 0.565781 4.3:+70219458 MS.gene87998:CDS
AAAATCATGTCGGTTAAGAT+GGG 0.567797 4.3:+70219601 MS.gene87998:CDS
GGAGCAAGAAGAATGGAACT+AGG 0.574079 4.3:+70221412 MS.gene87998:CDS
TGGAGCTCCATTCGATCCAA+AGG 0.580870 4.3:+70219560 MS.gene87998:CDS
TTCTTATATGGGAAACAAAG+AGG 0.593324 4.3:+70221125 MS.gene87998:CDS
GAAAGTCCATCTGTGATTCA+GGG 0.593626 4.3:-70221296 None:intergenic
ATTACTCCCTGAATCACAGA+TGG 0.605254 4.3:+70221290 MS.gene87998:CDS
GGATGGAGAGGAATTATCCA+AGG 0.606339 4.3:+70220571 MS.gene87998:CDS
TGCTGATGAAGACTCAAATG+AGG 0.614303 4.3:-70221256 None:intergenic
ATGTGGTTCAAATCAGCTTG+AGG 0.615982 4.3:+70221083 MS.gene87998:CDS
AATGAGGGTACTGTGTGAAG+TGG 0.635827 4.3:-70221240 None:intergenic
CAAACATGTCCATAAAATTG+GGG 0.636075 4.3:-70221362 None:intergenic
GGTCAAAGGGATCTTGAACA+AGG 0.644333 4.3:-70221341 None:intergenic
GCTGATGAAGACTCAAATGA+GGG 0.648150 4.3:-70221255 None:intergenic
AAATTGCTACATATTTGGAA+GGG 0.659564 4.3:+70220502 MS.gene87998:CDS
CAAGAACTGGAAAATCATGT+CGG 0.674438 4.3:+70219591 MS.gene87998:CDS
TCAAAGCAGCAGAAACACAA+GGG 0.678275 4.3:+70220609 MS.gene87998:CDS
GGGTACTGTGTGAAGTGGAG+TGG 0.686347 4.3:-70221235 None:intergenic
AGGGTGGTGATTGAACTACA+GGG 0.755598 4.3:+70220456 MS.gene87998:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTATAACAATAATTAAAATT+AGG - chr4.3:70219675-70219694 None:intergenic 10.0%
!!! AAATACATTGCTATATTTTT+GGG - chr4.3:70220119-70220138 None:intergenic 15.0%
!!! AATTTAGAATTAAAAAAACC+AGG - chr4.3:70219847-70219866 None:intergenic 15.0%
!!! TGGTTTTTTTAATTCTAAAT+TGG + chr4.3:70219846-70219865 MS.gene87998:intron 15.0%
!! AAATCAAGTAAAAGTTGAAA+AGG + chr4.3:70220644-70220663 MS.gene87998:CDS 20.0%
!! AATAACACCAAAAATTTGAA+AGG - chr4.3:70219885-70219904 None:intergenic 20.0%
!! ACAAACACTGTTAAATTAAA+CGG - chr4.3:70220340-70220359 None:intergenic 20.0%
!! ATAACACCAAAAATTTGAAA+GGG - chr4.3:70219884-70219903 None:intergenic 20.0%
!! TCAAAATGATTATGTAATCA+CGG - chr4.3:70220750-70220769 None:intergenic 20.0%
!! TTGAAACATGTTAACAAATA+TGG + chr4.3:70219527-70219546 MS.gene87998:CDS 20.0%
!! TTGATTCAATTATACTTCAT+AGG + chr4.3:70220056-70220075 MS.gene87998:intron 20.0%
!!! CAAATACATTGCTATATTTT+TGG - chr4.3:70220120-70220139 None:intergenic 20.0%
!!! TTGTTTGTTTCTACTATTTT+TGG - chr4.3:70220180-70220199 None:intergenic 20.0%
! AAAATTGCTACATATTTGGA+AGG + chr4.3:70220501-70220520 MS.gene87998:CDS 25.0%
! AAATGGAATTATTGAGTTTG+AGG + chr4.3:70221212-70221231 MS.gene87998:CDS 25.0%
! AAATTGCTACATATTTGGAA+GGG + chr4.3:70220502-70220521 MS.gene87998:CDS 25.0%
! AAGAAGTTACATTTATTGCA+AGG - chr4.3:70220243-70220262 None:intergenic 25.0%
! AAGTATTCAAAAATCTCAGT+TGG - chr4.3:70221504-70221523 None:intergenic 25.0%
! AATTTGGAAAGTGAACTAAA+TGG + chr4.3:70221195-70221214 MS.gene87998:CDS 25.0%
! ACATGAAAGATTAGAAAGTA+TGG + chr4.3:70221025-70221044 MS.gene87998:intron 25.0%
! AGAATTAAAAAAACCAGGAA+AGG - chr4.3:70219842-70219861 None:intergenic 25.0%
! ATAGTGAAAATGTCTATTTC+AGG + chr4.3:70221053-70221072 MS.gene87998:intron 25.0%
! GAAAGAGGTTACATAAAAAA+AGG + chr4.3:70219473-70219492 MS.gene87998:CDS 25.0%
! TCAAACATGTCCATAAAATT+GGG - chr4.3:70221366-70221385 None:intergenic 25.0%
!! ACAATGATGTGAAGAATTTT+TGG + chr4.3:70220532-70220551 MS.gene87998:CDS 25.0%
!! ATGAAATGTCCAATTTTGTT+CGG + chr4.3:70220830-70220849 MS.gene87998:intron 25.0%
!! TTAGTTCACTTTCCAAATTT+TGG - chr4.3:70221194-70221213 None:intergenic 25.0%
!! TTCCAAATATGTAGCAATTT+TGG - chr4.3:70220502-70220521 None:intergenic 25.0%
!! TTGAAATGTCCAATTTTGTT+CGG + chr4.3:70220766-70220785 MS.gene87998:intron 25.0%
!!! AAAAATGTTCAGAAAGTGTT+TGG + chr4.3:70221391-70221410 MS.gene87998:CDS 25.0%
!!! AAACGATAATTTTAGTGTGA+AGG + chr4.3:70220976-70220995 MS.gene87998:intron 25.0%
!!! AACGATAATTTTAGTGTGAA+GGG + chr4.3:70220977-70220996 MS.gene87998:intron 25.0%
!!! TATATTTTTGGGATAAACCT+TGG - chr4.3:70220108-70220127 None:intergenic 25.0%
!!! TTGTGTTTTGTGTTTTGTTA+TGG + chr4.3:70219759-70219778 MS.gene87998:intron 25.0%
!!! TTTGTTTTGTGATGAAAGTT+TGG + chr4.3:70220384-70220403 MS.gene87998:intron 25.0%
AAAGCCAAACTACCAAAATT+TGG + chr4.3:70221179-70221198 MS.gene87998:CDS 30.0%
ACTTACCCAACTTCTTATAT+GGG + chr4.3:70221114-70221133 MS.gene87998:CDS 30.0%
ATGAATCATCCGATTAACAT+CGG + chr4.3:70220904-70220923 MS.gene87998:intron 30.0%
ATGGAAAGAGAATATGAAAG+AGG + chr4.3:70219458-70219477 MS.gene87998:CDS 30.0%
ATGTGTGATTTCAATTGTAG+AGG + chr4.3:70220408-70220427 MS.gene87998:intron 30.0%
CAAACATGTCCATAAAATTG+GGG - chr4.3:70221365-70221384 None:intergenic 30.0%
CTCAAACATGTCCATAAAAT+TGG - chr4.3:70221367-70221386 None:intergenic 30.0%
GCTATTATTGTTCAAGTGTT+GGG + chr4.3:70220286-70220305 MS.gene87998:intron 30.0%
GTAATCACATGTGTTGAAAT+TGG - chr4.3:70219963-70219982 None:intergenic 30.0%
GTTACATAAAAAAAGGACCA+TGG + chr4.3:70219480-70219499 MS.gene87998:CDS 30.0%
TACTTACCCAACTTCTTATA+TGG + chr4.3:70221113-70221132 MS.gene87998:CDS 30.0%
TGCTATTATTGTTCAAGTGT+TGG + chr4.3:70220285-70220304 MS.gene87998:intron 30.0%
TGTTTCCCATATAAGAAGTT+GGG - chr4.3:70221122-70221141 None:intergenic 30.0%
TTACACTGACACATTAACAT+CGG - chr4.3:70220020-70220039 None:intergenic 30.0%
TTCTTATATGGGAAACAAAG+AGG + chr4.3:70221125-70221144 MS.gene87998:CDS 30.0%
TTGTTTCCCATATAAGAAGT+TGG - chr4.3:70221123-70221142 None:intergenic 30.0%
! AAAATCATGTCGGTTAAGAT+GGG + chr4.3:70219601-70219620 MS.gene87998:CDS 30.0%
! AGTTTTCATTAGAGGAAGAA+AGG + chr4.3:70220436-70220455 MS.gene87998:CDS 30.0%
! ATAGGTTGAAACATTGGATA+TGG + chr4.3:70220074-70220093 MS.gene87998:intron 30.0%
! CTATTATTGTTCAAGTGTTG+GGG + chr4.3:70220287-70220306 MS.gene87998:intron 30.0%
! GTTTTCATTAGAGGAAGAAA+GGG + chr4.3:70220437-70220456 MS.gene87998:CDS 30.0%
! TACTTCATAGGTTGAAACAT+TGG + chr4.3:70220068-70220087 MS.gene87998:intron 30.0%
! TTCACACCCTTTCAAATTTT+TGG + chr4.3:70219875-70219894 MS.gene87998:intron 30.0%
!! CTTTCCAAATTTTGGTAGTT+TGG - chr4.3:70221186-70221205 None:intergenic 30.0%
!! TAGTTTGGCTTTGTTAAATC+TGG - chr4.3:70221171-70221190 None:intergenic 30.0%
!!! ACAGTGTTTGTTTTAGTGTA+CGG + chr4.3:70220349-70220368 MS.gene87998:intron 30.0%
!!! TGTTACTACGTTTTCAAGTT+GGG - chr4.3:70219641-70219660 None:intergenic 30.0%
!!! TTGTTACTACGTTTTCAAGT+TGG - chr4.3:70219642-70219661 None:intergenic 30.0%
AAGTTCAAACTGCTTCTTTC+AGG + chr4.3:70221473-70221492 MS.gene87998:CDS 35.0%
ACAAATATGGTCCTAGAGAT+TGG + chr4.3:70219540-70219559 MS.gene87998:CDS 35.0%
ACGAATTATAGAAACCTCTG+TGG + chr4.3:70219923-70219942 MS.gene87998:intron 35.0%
CAAGAACTGGAAAATCATGT+CGG + chr4.3:70219591-70219610 MS.gene87998:CDS 35.0%
CGAATTATAGAAACCTCTGT+GGG + chr4.3:70219924-70219943 MS.gene87998:intron 35.0%
GGCCAAAATTGCTACATATT+TGG + chr4.3:70220497-70220516 MS.gene87998:CDS 35.0%
TCCATAAAATTGGGGTCAAA+GGG - chr4.3:70221357-70221376 None:intergenic 35.0%
TGGACATTTCATTGCAATGT+AGG - chr4.3:70220822-70220841 None:intergenic 35.0%
TTCTAGTGTCCGATGTTAAT+CGG - chr4.3:70220916-70220935 None:intergenic 35.0%
! AGGATGCAAGTTTTCATTAG+AGG + chr4.3:70220428-70220447 MS.gene87998:CDS 35.0%
! GAAAATCATGTCGGTTAAGA+TGG + chr4.3:70219600-70219619 MS.gene87998:CDS 35.0%
! GTGAAGTATCCGAACAAAAT+TGG - chr4.3:70220778-70220797 None:intergenic 35.0%
!! TTGGCTTTGTTAAATCTGGA+AGG - chr4.3:70221167-70221186 None:intergenic 35.0%
!!! TGAAGAATTTTTGGAGTAGC+AGG + chr4.3:70220541-70220560 MS.gene87998:CDS 35.0%
AGTTCTTGGCAAAAGACCTT+TGG - chr4.3:70219579-70219598 None:intergenic 40.0%
ATCAAAGCAGCAGAAACACA+AGG + chr4.3:70220608-70220627 MS.gene87998:CDS 40.0%
ATCTGTGATTCAGGGAGTAA+TGG - chr4.3:70221291-70221310 None:intergenic 40.0%
ATGTGGTTCAAATCAGCTTG+AGG + chr4.3:70221083-70221102 MS.gene87998:CDS 40.0%
ATTACTCCCTGAATCACAGA+TGG + chr4.3:70221290-70221309 MS.gene87998:CDS 40.0%
ATTGAACTACAGGGCCAATT+TGG + chr4.3:70220465-70220484 MS.gene87998:CDS 40.0%
CAAAAGACCTTTGGATCGAA+TGG - chr4.3:70219570-70219589 None:intergenic 40.0%
GAAAGTCCATCTGTGATTCA+GGG - chr4.3:70221299-70221318 None:intergenic 40.0%
GCTGATGAAGACTCAAATGA+GGG - chr4.3:70221258-70221277 None:intergenic 40.0%
GTCCATAAAATTGGGGTCAA+AGG - chr4.3:70221358-70221377 None:intergenic 40.0%
TCAAAGCAGCAGAAACACAA+GGG + chr4.3:70220609-70220628 MS.gene87998:CDS 40.0%
TCATCTTCTTCACTACTCCA+TGG - chr4.3:70219500-70219519 None:intergenic 40.0%
TGCTGATGAAGACTCAAATG+AGG - chr4.3:70221259-70221278 None:intergenic 40.0%
TGGATATGGCAATGTAACCA+AGG + chr4.3:70220088-70220107 MS.gene87998:intron 40.0%
TGTTTATCTTGCTCCTTTCC+TGG + chr4.3:70219826-70219845 MS.gene87998:intron 40.0%
TTCATTAGAGGAAGAAAGGG+TGG + chr4.3:70220440-70220459 MS.gene87998:CDS 40.0%
TTGAACTACAGGGCCAATTT+GGG + chr4.3:70220466-70220485 MS.gene87998:CDS 40.0%
TTTCCTTCAAGTCCAAGACT+TGG - chr4.3:70221441-70221460 None:intergenic 40.0%
! AAAGGTCTTTTGCCAAGAAC+TGG + chr4.3:70219578-70219597 MS.gene87998:CDS 40.0%
! AGTGTTTGGAGCAAGAAGAA+TGG + chr4.3:70221405-70221424 MS.gene87998:CDS 40.0%
! CGACATGATTTTCCAGTTCT+TGG - chr4.3:70219593-70219612 None:intergenic 40.0%
! TCCCTTTGACCCCAATTTTA+TGG + chr4.3:70221353-70221372 MS.gene87998:CDS 40.0%
! TTTGGAGTAGCAGGAGAAAA+AGG + chr4.3:70220550-70220569 MS.gene87998:CDS 40.0%
!! AGCTGATTTGAACCACATTC+AGG - chr4.3:70221081-70221100 None:intergenic 40.0%
!! CTATTTCAGGTTCCTGAATG+TGG + chr4.3:70221066-70221085 MS.gene87998:intron 40.0%
!! TTGTGTTTCTGCTGCTTTGA+TGG - chr4.3:70220609-70220628 None:intergenic 40.0%
AAGGGTGGTGATTGAACTAC+AGG + chr4.3:70220455-70220474 MS.gene87998:CDS 45.0%
AGGGATCTTGAACAAGGTCT+TGG - chr4.3:70221338-70221357 None:intergenic 45.0%
AGGGCCAATTTGGGAACAAA+TGG + chr4.3:70220475-70220494 MS.gene87998:CDS 45.0%
AGGGTGGTGATTGAACTACA+GGG + chr4.3:70220456-70220475 MS.gene87998:CDS 45.0%
GAGTAGCAGGAGAAAAAGGA+TGG + chr4.3:70220554-70220573 MS.gene87998:CDS 45.0%
GGAAAGTCCATCTGTGATTC+AGG - chr4.3:70221300-70221319 None:intergenic 45.0%
GGAGCAAGAAGAATGGAACT+AGG + chr4.3:70221412-70221431 MS.gene87998:CDS 45.0%
GGATGGAGAGGAATTATCCA+AGG + chr4.3:70220571-70220590 MS.gene87998:CDS 45.0%
GGGCCAATTTGGGAACAAAT+GGG + chr4.3:70220476-70220495 MS.gene87998:CDS 45.0%
GGTCAAAGGGATCTTGAACA+AGG - chr4.3:70221344-70221363 None:intergenic 45.0%
TAGAAACCTCTGTGGGTGAT+TGG + chr4.3:70219931-70219950 MS.gene87998:intron 45.0%
TGGCCCATTTGTTCCCAAAT+TGG - chr4.3:70220482-70220501 None:intergenic 45.0%
TTGCCAAGTCTTGGACTTGA+AGG + chr4.3:70221435-70221454 MS.gene87998:CDS 45.0%
!! AATGAGGGTACTGTGTGAAG+TGG - chr4.3:70221243-70221262 None:intergenic 45.0%
!! TGTTTCTGCTGCTTTGATGG+TGG - chr4.3:70220606-70220625 None:intergenic 45.0%
!! TATAACAATAATTAAAATTA+GGG - chr4.3:70219674-70219693 None:intergenic 5.0%
CGAATGGAGCTCCAATCTCT+AGG - chr4.3:70219554-70219573 None:intergenic 50.0%
GAACAAGGTCTTGGCACTCT+GGG - chr4.3:70221329-70221348 None:intergenic 50.0%
GAGATAACCCTGCATTCACG+CGG - chr4.3:70220953-70220972 None:intergenic 50.0%
GCAGGAGAAAAAGGATGGAG+AGG + chr4.3:70220559-70220578 MS.gene87998:CDS 50.0%
GGAACTAGGTTGCCAAGTCT+TGG + chr4.3:70221426-70221445 MS.gene87998:CDS 50.0%
TGAACAAGGTCTTGGCACTC+TGG - chr4.3:70221330-70221349 None:intergenic 50.0%
TGGAGCTCCATTCGATCCAA+AGG + chr4.3:70219560-70219579 MS.gene87998:CDS 50.0%
! TCTTGGCACTCTGGGAATAG+TGG - chr4.3:70221321-70221340 None:intergenic 50.0%
!! TGCTGCTTTGATGGTGGTGA+TGG - chr4.3:70220600-70220619 None:intergenic 50.0%
CGAACACCAATCACCCACAG+AGG - chr4.3:70219940-70219959 None:intergenic 55.0%
CGTATGACCGCGTGAATGCA+GGG + chr4.3:70220943-70220962 MS.gene87998:intron 55.0%
TCGTATGACCGCGTGAATGC+AGG + chr4.3:70220942-70220961 MS.gene87998:intron 55.0%
! GGGTACTGTGTGAAGTGGAG+TGG - chr4.3:70221238-70221257 None:intergenic 55.0%
!! GATGGTGGTGATGGTGTCCT+TGG - chr4.3:70220591-70220610 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 70219458 70221533 70219458 ID=MS.gene87998
chr4.3 mRNA 70219458 70221533 70219458 ID=MS.gene87998.t1;Parent=MS.gene87998
chr4.3 exon 70219458 70219651 70219458 ID=MS.gene87998.t1.exon1;Parent=MS.gene87998.t1
chr4.3 CDS 70219458 70219651 70219458 ID=cds.MS.gene87998.t1;Parent=MS.gene87998.t1
chr4.3 exon 70220428 70220665 70220428 ID=MS.gene87998.t1.exon2;Parent=MS.gene87998.t1
chr4.3 CDS 70220428 70220665 70220428 ID=cds.MS.gene87998.t1;Parent=MS.gene87998.t1
chr4.3 exon 70221075 70221533 70221075 ID=MS.gene87998.t1.exon3;Parent=MS.gene87998.t1
chr4.3 CDS 70221075 70221533 70221075 ID=cds.MS.gene87998.t1;Parent=MS.gene87998.t1
Gene Sequence

>MS.gene87998

ATGGAAAGAGAATATGAAAGAGGTTACATAAAAAAAGGACCATGGAGTAGTGAAGAAGATGAAGTGTTATTGAAACATGTTAACAAATATGGTCCTAGAGATTGGAGCTCCATTCGATCCAAAGGTCTTTTGCCAAGAACTGGAAAATCATGTCGGTTAAGATGGGTTAATAAGCTTAGACCCAACTTGAAAACGTAGTAACAATTTTCTTAACCCTAATTTTAATTATTGTTATACTTAATTTGAACATTGACATTGATTTCATGTTGTGTTGCAACTTTTTGTTTTTAATGTAATGTGTTTGTGTTTTGTGTTTTGTTATGGTTGTTGAATTAGAAAGAACTTGATTGTGCATAATTTTCATATATTGTTTATCTTGCTCCTTTCCTGGTTTTTTTAATTCTAAATTGGTAGTTTTTCACACCCTTTCAAATTTTTGGTGTTATTTATACTATATTTTTAGTAACGAATTATAGAAACCTCTGTGGGTGATTGGTGTTCGCCAATTTCAACACATGTGATTACATTCAATTGATATGTTTTTTTTTTTCAATTATTACCGATGTTAATGTGTCAGTGTAATGTGTTGTGATTGTGTTTGATTCAATTATACTTCATAGGTTGAAACATTGGATATGGCAATGTAACCAAGGTTTATCCCAAAAATATAGCAATGTATTTGTCTCTATGCATCTGTTTGATTTTGAAAAATGACTTTGCCAAAAATAGTAGAAACAAACAAAGTTGCTAAAAATAGTTCGATACAATACAAGAATATTTTACCTTGCAATAAATGTAACTTCTTTTTCTTTTTAAGTTTAATGTAATGCTATTATTGTTCAAGTGTTGGGGTTTGTGTCAATTTGTAAAATAACAATACCGTTTAATTTAACAGTGTTTGTTTTAGTGTACGGAAATTGTTGTGTTTTGTTTTGTGATGAAAGTTTGGAATGTGTGATTTCAATTGTAGAGGATGCAAGTTTTCATTAGAGGAAGAAAGGGTGGTGATTGAACTACAGGGCCAATTTGGGAACAAATGGGCCAAAATTGCTACATATTTGGAAGGGAGAACTGACAATGATGTGAAGAATTTTTGGAGTAGCAGGAGAAAAAGGATGGAGAGGAATTATCCAAGGACACCATCACCACCATCAAAGCAGCAGAAACACAAGGGAAAAGCTACTTCAAATCAAGTAAAAGTTGAAAAGGTTAAGTGAAAATGTTTTTCTCTTCAAACTTGTACATAAAGTTTTTCTAAAACAAGTGAGTTATGTTTTGAAATAGATTCTCCGTGATTACATAATCATTTTGAAATGTCCAATTTTGTTCGGATACTTCACATTTTGACTTCGTGTTTTGTACCTACATTGCAATGAAATGTCCAATTTTGTTCGGATACTTCACATTTTGACTTCGTGTTTTGTACATACATTGCAAATTTGTAATATGAATCATCCGATTAACATCGGACACTAGAATCTTGATCGTATGACCGCGTGAATGCAGGGTTATCTCGATAAACGATAATTTTAGTGTGAAGGGTTTTTCAAAATACACTTGATCTATTACATGAAAGATTAGAAAGTATGGACTTAATAGTGAAAATGTCTATTTCAGGTTCCTGAATGTGGTTCAAATCAGCTTGAGGAAAATCTTACTTACCCAACTTCTTATATGGGAAACAAAGAGGAGTTCAAGATGATCAACCTTCCAGATTTAACAAAGCCAAACTACCAAAATTTGGAAAGTGAACTAAATGGAATTATTGAGTTTGAGGCCACTCCACTTCACACAGTACCCTCATTTGAGTCTTCATCAGCAAACAACTTTCCATTACTCCCTGAATCACAGATGGACTTTCCACTATTCCCAGAGTGCCAAGACCTTGTTCAAGATCCCTTTGACCCCAATTTTATGGACATGTTTGAGCAGAAAAAATGTTCAGAAAGTGTTTGGAGCAAGAAGAATGGAACTAGGTTGCCAAGTCTTGGACTTGAAGGAAATTCTCAGAGTACAAGTTCAAACTGCTTCTTTCAGGACATTCCAACTGAGATTTTTGAATACTTTTCTCAGTAA
Protein sequence

>MS.gene87998.t1

MEREYERGYIKKGPWSSEEDEVLLKHVNKYGPRDWSSIRSKGLLPRTGKSCRLRWVNKLRPNLKTGCKFSLEEERVVIELQGQFGNKWAKIATYLEGRTDNDVKNFWSSRRKRMERNYPRTPSPPSKQQKHKGKATSNQVKVEKVPECGSNQLEENLTYPTSYMGNKEEFKMINLPDLTKPNYQNLESELNGIIEFEATPLHTVPSFESSSANNFPLLPESQMDFPLFPECQDLVQDPFDPNFMDMFEQKKCSESVWSKKNGTRLPSLGLEGNSQSTSSNCFFQDIPTEIFEYFSQ