AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene88076

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene88076.t1 MTR_7g427710 88.432 657 54 5 15 664 1 642 0.0 1183
MS.gene88076.t1 MTR_6g477820 64.843 731 184 12 1 663 1 726 0.0 892
MS.gene88076.t1 MTR_7g427690 79.956 454 51 7 140 584 26 448 0.0 718
MS.gene88076.t1 MTR_8g432540 45.288 711 305 16 25 662 109 808 0.0 567
MS.gene88076.t1 MTR_7g076080 45.042 706 307 17 24 662 85 776 0.0 561
MS.gene88076.t1 MTR_2g088470 44.477 688 308 14 29 661 65 733 0.0 535
MS.gene88076.t1 MTR_5g029320 42.999 707 331 14 20 660 78 778 1.26e-180 533
MS.gene88076.t1 MTR_4g047800 42.535 710 332 17 11 661 38 730 1.09e-176 521
MS.gene88076.t1 MTR_1g101280 41.726 707 327 18 29 660 54 750 4.96e-174 514
MS.gene88076.t1 MTR_7g427700 84.775 289 28 3 15 297 1 279 2.47e-171 496
MS.gene88076.t1 MTR_7g427700 88.462 156 18 0 509 664 280 435 1.80e-87 280
MS.gene88076.t1 MTR_2g101720 36.953 663 367 13 36 662 144 791 3.02e-152 460
MS.gene88076.t1 MTR_0198s0030 37.482 707 345 17 36 660 60 751 9.87e-140 426
MS.gene88076.t1 MTR_2g030570 37.410 695 364 13 21 660 17 695 9.09e-136 414
MS.gene88076.t1 MTR_2g030600 36.950 682 361 12 31 660 24 688 8.05e-130 399
MS.gene88076.t1 MTR_5g005600 37.085 693 338 21 38 660 52 716 3.40e-128 395
MS.gene88076.t1 MTR_2g030660 35.940 665 370 20 25 660 10 647 2.58e-112 352
MS.gene88076.t1 MTR_0653s0020 84.375 192 20 2 360 550 1 183 2.04e-107 323
MS.gene88076.t1 MTR_0653s0010 90.678 118 11 0 547 664 1 118 2.03e-66 214
MS.gene88076.t1 MTR_2g083330 31.614 446 260 12 238 661 104 526 7.93e-60 210
MS.gene88076.t1 MTR_7g027605 93.407 91 6 0 267 357 1 91 3.95e-57 188
MS.gene88076.t1 MTR_2g083350 32.063 446 260 15 238 661 108 532 1.76e-56 201
MS.gene88076.t1 MTR_7g027265 62.500 136 40 1 15 139 1 136 1.57e-48 167
MS.gene88076.t1 MTR_7g427670 88.235 85 10 0 85 169 32 116 1.07e-42 150
MS.gene88076.t1 MTR_5g046040 48.780 164 70 3 8 160 14 174 4.16e-39 148
MS.gene88076.t1 MTR_7g427720 89.474 76 8 0 589 664 24 99 5.32e-38 136
MS.gene88076.t1 MTR_7g027245 71.429 77 14 1 187 263 19 87 7.94e-27 105
MS.gene88076.t1 MTR_2g030690 30.640 297 166 10 384 660 1 277 8.71e-27 110
MS.gene88076.t1 MTR_2g451350 43.284 134 74 2 192 324 1 133 2.64e-25 102
MS.gene88076.t1 MTR_2g030130 22.070 512 303 19 37 504 16 475 1.25e-18 90.9
MS.gene88076.t1 MTR_4g058970 21.053 722 398 28 1 630 7 648 1.09e-17 87.8
MS.gene88076.t1 MTR_6g027290 33.333 129 74 1 42 158 36 164 2.09e-17 80.9
MS.gene88076.t1 MTR_6g086740 77.083 48 8 1 619 663 3 50 1.10e-14 68.9
MS.gene88076.t1 MTR_2g030720 33.613 119 69 3 37 152 24 135 6.31e-14 70.5
MS.gene88076.t1 MTR_2g030700 32.143 140 75 5 37 164 24 155 3.63e-12 65.5
MS.gene88076.t1 MTR_1g105420 29.500 200 88 8 86 245 1 187 4.19e-12 66.6
MS.gene88076.t1 MTR_2g030680 31.429 140 76 5 37 164 24 155 3.61e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene88076.t1 AT1G73360 52.579 698 255 13 30 663 31 716 0.0 668
MS.gene88076.t1 AT1G17920 52.907 688 239 17 34 663 24 684 0.0 653
MS.gene88076.t1 AT1G17920 52.907 688 239 17 34 663 24 684 0.0 653
MS.gene88076.t1 AT4G04890 45.864 689 303 19 31 662 62 737 0.0 558
MS.gene88076.t1 AT4G04890 45.864 689 303 19 31 662 62 737 0.0 558
MS.gene88076.t1 AT4G21750 44.304 711 304 17 31 662 62 759 0.0 537
MS.gene88076.t1 AT4G21750 44.304 711 304 17 31 662 62 759 0.0 537
MS.gene88076.t1 AT4G21750 44.304 711 304 17 31 662 62 759 0.0 537
MS.gene88076.t1 AT4G21750 44.304 711 304 17 31 662 62 759 0.0 537
MS.gene88076.t1 AT1G05230 42.734 695 318 16 20 662 50 716 4.00e-179 526
MS.gene88076.t1 AT1G05230 42.611 697 318 17 20 662 50 718 4.27e-177 521
MS.gene88076.t1 AT1G05230 42.611 697 318 17 20 662 50 718 4.27e-177 521
MS.gene88076.t1 AT1G05230 42.611 697 318 17 20 662 50 718 4.27e-177 521
MS.gene88076.t1 AT1G05230 42.611 697 318 17 20 662 50 718 4.27e-177 521
MS.gene88076.t1 AT1G05230 42.611 697 318 17 20 662 50 718 4.27e-177 521
MS.gene88076.t1 AT1G05230 42.611 697 318 17 20 662 50 718 4.27e-177 521
MS.gene88076.t1 AT1G05230 42.611 697 318 17 20 662 50 718 4.27e-177 521
MS.gene88076.t1 AT1G05230 42.611 697 318 17 20 662 50 718 4.27e-177 521
MS.gene88076.t1 AT1G05230 42.611 697 318 17 20 662 50 718 4.27e-177 521
MS.gene88076.t1 AT1G05230 42.611 697 318 17 20 662 50 718 4.27e-177 521
MS.gene88076.t1 AT3G61150 41.980 717 324 19 24 662 103 805 4.51e-177 524
MS.gene88076.t1 AT4G00730 44.023 686 311 15 31 662 134 800 1.27e-175 520
MS.gene88076.t1 AT5G52170 41.219 689 329 18 13 663 31 681 2.23e-155 464
MS.gene88076.t1 AT5G52170 41.219 689 329 18 13 663 31 681 2.23e-155 464
MS.gene88076.t1 AT5G52170 41.159 690 333 19 13 663 31 686 1.95e-154 462
MS.gene88076.t1 AT3G03260 38.397 711 346 15 20 663 12 697 2.91e-147 444
MS.gene88076.t1 AT1G05230 42.021 564 270 12 20 538 50 601 2.26e-143 431
MS.gene88076.t1 AT5G46880 39.580 715 328 20 31 660 111 806 4.63e-141 432
MS.gene88076.t1 AT5G46880 39.580 715 328 20 31 660 111 806 4.63e-141 432
MS.gene88076.t1 AT5G46880 39.580 715 328 20 31 660 111 806 4.63e-141 432
MS.gene88076.t1 AT1G79840 37.613 662 369 17 27 660 39 684 1.43e-139 424
MS.gene88076.t1 AT1G79840 37.613 662 369 17 27 660 39 684 1.43e-139 424
MS.gene88076.t1 AT1G79840 37.613 662 369 17 27 660 97 742 8.54e-139 424
MS.gene88076.t1 AT1G79840 37.613 662 369 17 27 660 126 771 3.69e-138 423
MS.gene88076.t1 AT4G17710 40.465 645 340 16 31 660 88 703 5.15e-135 413
MS.gene88076.t1 AT5G17320 36.676 728 352 20 20 662 14 717 1.56e-127 394
MS.gene88076.t1 AT2G32370 36.155 697 364 18 18 662 55 722 2.29e-127 394
MS.gene88076.t1 AT1G79840 38.302 530 301 12 27 536 97 620 4.42e-118 366
MS.gene88076.t1 AT1G34650 36.222 704 351 12 38 662 23 707 9.89e-118 368
MS.gene88076.t1 AT4G00730 45.755 424 186 8 31 417 134 550 3.91e-114 354
MS.gene88076.t1 AT3G03260 39.212 533 274 10 20 508 12 538 5.12e-113 350
MS.gene88076.t1 AT4G25530 33.973 677 378 17 26 661 35 683 2.62e-102 327
MS.gene88076.t1 AT1G79840 39.810 422 238 10 27 437 97 513 1.13e-91 294
MS.gene88076.t1 AT5G07260 26.012 519 319 18 97 589 10 489 3.09e-38 149
MS.gene88076.t1 AT5G07260 26.296 521 310 18 97 589 10 484 4.33e-38 149
MS.gene88076.t1 AT5G60690 22.433 526 308 20 17 504 8 471 1.36e-19 94.0
MS.gene88076.t1 AT1G30490 21.135 705 408 27 14 630 1 645 1.25e-17 87.8
MS.gene88076.t1 AT2G34710 21.331 511 310 18 37 504 28 489 1.95e-15 80.9

Find 124 sgRNAs with CRISPR-Local

Find 269 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAATTGTTAATGGACTTAT+TGG 0.149364 7.1:-69721810 MS.gene88076:CDS
TGGAAACTAATGAGCCTTTA+TGG 0.155056 7.1:-69724530 MS.gene88076:CDS
AACAGTTGCATTTCAAATTA+TGG 0.161793 7.1:-69721865 MS.gene88076:CDS
TAACTGCATTTCCGTGTTTA+AGG 0.164073 7.1:-69722822 MS.gene88076:intron
CTTGCTTATCTTATGGATTC+TGG 0.206740 7.1:-69723524 MS.gene88076:CDS
GAGTCTGTTCCAATTGTTAA+TGG 0.231563 7.1:-69721819 MS.gene88076:CDS
GACTTTGGTTGAAATGCTTA+TGG 0.235062 7.1:-69724364 MS.gene88076:CDS
ATCCTACCAAGATCAAATTT+TGG 0.239855 7.1:-69725607 MS.gene88076:CDS
AGAAGCTTCGATGCGAATAT+TGG 0.259862 7.1:+69724419 None:intergenic
CATTCTCTTCTATGAGTATA+CGG 0.271618 7.1:+69725441 None:intergenic
AACAATGATCCTCCAATGTT+TGG 0.280132 7.1:+69721888 None:intergenic
TGTTTCTTCTAAGAGACTTA+TGG 0.294415 7.1:-69726306 MS.gene88076:CDS
TGAAAGGCTTGCTTATCTTA+TGG 0.295191 7.1:-69723531 MS.gene88076:CDS
ACCTGCTGGTCTCTCTAATA+AGG 0.317654 7.1:-69724610 MS.gene88076:CDS
AGGAAGTAAAATTCTCTAAT+AGG 0.322633 7.1:+69723941 None:intergenic
ATCTATAGTGGAGTTGCATT+TGG 0.334624 7.1:-69723590 MS.gene88076:CDS
AATTGCCATTAGGCATGTTT+TGG 0.343841 7.1:+69723798 None:intergenic
ACTCTTACGCTTCAAGCCTT+TGG 0.345673 7.1:+69726201 None:intergenic
CGAGGCCATCGTCTTCCTTC+CGG 0.346534 7.1:-69723830 MS.gene88076:CDS
CAAGGAGGTAATAGTGATAA+TGG 0.367284 7.1:-69721936 MS.gene88076:CDS
TCTTAGTGGTTCTTTGCAAT+TGG 0.371610 7.1:-69724160 MS.gene88076:intron
CTGAAACCAAAATTTGATCT+TGG 0.383519 7.1:+69725601 None:intergenic
TTCGCCATTGTCACAATAGT+TGG 0.383650 7.1:+69724219 None:intergenic
ACAATGATCCTCCAATGTTT+GGG 0.386821 7.1:+69721889 None:intergenic
TATAGAAATGTTATCTATAG+TGG 0.388325 7.1:-69723602 MS.gene88076:CDS
CCAATAAGTCCATTAACAAT+TGG 0.391204 7.1:+69721810 None:intergenic
ATCGAAGCTTCTAGAAATTC+TGG 0.400503 7.1:-69724408 MS.gene88076:CDS
GAAGCTTCGATGCGAATATT+GGG 0.405652 7.1:+69724420 None:intergenic
GCAGGTTGGTAAGGAACATT+TGG 0.407059 7.1:+69724627 None:intergenic
CTCATTATTGATGAATCAAC+AGG 0.412591 7.1:+69722041 None:intergenic
CGAACAAAGGATGGTCTTAG+TGG 0.418714 7.1:-69724174 MS.gene88076:CDS
TTCATCCAAAACATGCCTAA+TGG 0.421114 7.1:-69723803 MS.gene88076:CDS
ATTACCTTGGAATTGCCATT+AGG 0.421267 7.1:+69723788 None:intergenic
TTTCTTCTGATACTCATAAG+AGG 0.424848 7.1:-69726262 MS.gene88076:CDS
GGTTTCGCAATTACTTCTGA+TGG 0.425225 7.1:-69721981 MS.gene88076:CDS
ATGCATCAGCTAGTCATAGA+TGG 0.431673 7.1:-69723197 MS.gene88076:CDS
GCGCTTAGCACCTCACCATT+AGG 0.435182 7.1:+69723129 None:intergenic
TTTCTATAGAGCATATGAAC+TGG 0.444548 7.1:+69723617 None:intergenic
ATCATGGTCCTCTTTCCATC+AGG 0.446341 7.1:+69723264 None:intergenic
GGCAATGTTGATGAACTTCC+TGG 0.447876 7.1:+69724648 None:intergenic
TACATTCAATTACTACCATC+AGG 0.449951 7.1:-69722002 MS.gene88076:CDS
GAGAGACCAGCAGGTTGGTA+AGG 0.458220 7.1:+69724618 None:intergenic
CCTTTGTGTTAGCTTCATCA+TGG 0.462487 7.1:+69723248 None:intergenic
GGAACAGACTCCATGTTAGA+TGG 0.463514 7.1:+69721831 None:intergenic
CAAAATGATAATAATATTCA+AGG 0.464579 7.1:-69721954 MS.gene88076:CDS
GAAAGTTGCGTGGACTCATC+AGG 0.464695 7.1:-69722083 MS.gene88076:CDS
AACACGGAAATGCAGTTACC+AGG 0.472364 7.1:+69722827 None:intergenic
TACTGTAAACAATTTGAGAA+AGG 0.478598 7.1:-69723914 MS.gene88076:CDS
ACATTGTTTCGTAGGTTTCA+AGG 0.480442 7.1:+69724472 None:intergenic
TAAGCGCATCTACTACCATT+TGG 0.483607 7.1:-69723113 MS.gene88076:CDS
CGACGAAAGGAAAAGATCTC+AGG 0.484990 7.1:-69723052 MS.gene88076:intron
ATGGATTCTGGCCATTCTAC+CGG 0.490249 7.1:-69723512 MS.gene88076:CDS
CTTCGAGATGACCGGTAGAA+TGG 0.492926 7.1:+69723501 None:intergenic
CTCTTGAACATCATTACCAT+TGG 0.494619 7.1:+69722877 None:intergenic
AGCATTGCAGCTGGATACAC+TGG 0.498024 7.1:-69724693 MS.gene88076:CDS
TTTGATCTTGGTAGGATCCA+TGG 0.500300 7.1:+69725613 None:intergenic
TCCTTATTAGAGAGACCAGC+AGG 0.504163 7.1:+69724609 None:intergenic
GTAAACAATTTGAGAAAGGA+TGG 0.505133 7.1:-69723910 MS.gene88076:CDS
TTGATGAACTTCCTGGTAGA+AGG 0.508996 7.1:+69724655 None:intergenic
TATCATGAACGCCTTGACTT+TGG 0.514251 7.1:-69724379 MS.gene88076:CDS
TTTAACTGATTATTAACCCT+AGG 0.515861 7.1:+69724447 None:intergenic
AGTTATATCTTCTCGAACAA+AGG 0.524691 7.1:-69724187 MS.gene88076:CDS
CCTAGGGAACATTGTTTCGT+AGG 0.525554 7.1:+69724464 None:intergenic
AACACAGTCTGTGGAGGGAG+AGG 0.525919 7.1:+69723087 None:intergenic
TCAATTTCTTGAACGACGAA+AGG 0.527175 7.1:-69723065 MS.gene88076:CDS
TGGATAAAATCAAACACTGA+TGG 0.528970 7.1:-69724510 MS.gene88076:CDS
CTCATTCAAAGTTGATATTG+TGG 0.534041 7.1:+69723173 None:intergenic
TCAGTGATTCCATCACCTGA+TGG 0.534239 7.1:-69723279 MS.gene88076:intron
GTGAGGAAGAGTCAGCCTAA+TGG 0.538342 7.1:-69723144 MS.gene88076:CDS
AAGAAATTGAACACAGTCTG+TGG 0.542018 7.1:+69723078 None:intergenic
CCTACGAAACAATGTTCCCT+AGG 0.544052 7.1:-69724464 MS.gene88076:CDS
TTAACTGATTATTAACCCTA+GGG 0.546265 7.1:+69724448 None:intergenic
TTCTATAGAGCATATGAACT+GGG 0.555956 7.1:+69723618 None:intergenic
TAGTCGAATGTACTTTCCAA+TGG 0.556387 7.1:-69722893 MS.gene88076:CDS
CACTTCAAAGAATGTGTGAA+AGG 0.558355 7.1:-69723547 MS.gene88076:CDS
AATGTTCCTTACCAACCTGC+TGG 0.559665 7.1:-69724624 MS.gene88076:CDS
AGAGTATCTAGCATTGCAGC+TGG 0.559790 7.1:-69724702 MS.gene88076:CDS
GTCCTCTTTCCATCAGGTGA+TGG 0.565474 7.1:+69723270 None:intergenic
AGCTCAAACCCAAACATTGG+AGG 0.568422 7.1:-69721897 MS.gene88076:CDS
GAAGTAATTGCGAAACCTGA+TGG 0.568742 7.1:+69721987 None:intergenic
GATGAAGCTAACACAAAGGA+TGG 0.568765 7.1:-69723244 MS.gene88076:CDS
GAATAGAAGGACTCAGATGA+AGG 0.569088 7.1:-69725579 MS.gene88076:intron
TTCCATCACCTGATGGAAAG+AGG 0.570470 7.1:-69723272 MS.gene88076:CDS
CATGCCTAATGGCAATTCCA+AGG 0.570990 7.1:-69723792 MS.gene88076:intron
CAATGGTAATGATGTTCAAG+AGG 0.572359 7.1:-69722876 MS.gene88076:CDS
ATATCTTCTCGAACAAAGGA+TGG 0.574939 7.1:-69724183 MS.gene88076:CDS
ACAAGCTCAAACCCAAACAT+TGG 0.579839 7.1:-69721900 MS.gene88076:CDS
GATCTGAGAATATAGCTATG+AGG 0.582816 7.1:-69725409 MS.gene88076:CDS
TCACTGTCACACCTTCTACC+AGG 0.583984 7.1:-69724666 MS.gene88076:CDS
ATTTCCAACTATTGTGACAA+TGG 0.591683 7.1:-69724223 MS.gene88076:CDS
GCTACCTCCTTCGAGATGAC+CGG 0.591729 7.1:+69723493 None:intergenic
ACAAAGGTTGCAGTTAGGCA+AGG 0.593066 7.1:-69725642 MS.gene88076:CDS
TGGAGGGAGAGGTAGCCAAA+TGG 0.596344 7.1:+69723098 None:intergenic
ATACCAATAAGGAACTACAT+AGG 0.600755 7.1:+69721750 None:intergenic
GGTAGTAATTGAATGTATGA+AGG 0.601567 7.1:+69722008 None:intergenic
TACTTGGATTGAACATGTTG+AGG 0.602638 7.1:-69723654 MS.gene88076:CDS
CAAATTGTTTACAGTAACGT+AGG 0.603339 7.1:+69723921 None:intergenic
TAAACAATTTGAGAAAGGAT+GGG 0.603561 7.1:-69723909 MS.gene88076:CDS
ATAGCAAATGTTTCGCACCC+TGG 0.605806 7.1:-69722845 MS.gene88076:CDS
CTACGAAACAATGTTCCCTA+GGG 0.607636 7.1:-69724463 MS.gene88076:CDS
AACCAAAATTTGATCTTGGT+AGG 0.607752 7.1:+69725605 None:intergenic
AAATTGAACACAGTCTGTGG+AGG 0.609412 7.1:+69723081 None:intergenic
GTTAGGCAAGGAATTAGCCA+TGG 0.615783 7.1:-69725630 MS.gene88076:CDS
CATTCTACCGGTCATCTCGA+AGG 0.616307 7.1:-69723500 MS.gene88076:CDS
AAGCATTTCAACCAAAGTCA+AGG 0.617506 7.1:+69724368 None:intergenic
AATTGAACACAGTCTGTGGA+GGG 0.617532 7.1:+69723082 None:intergenic
GGATCTGATCAGCAGTGTGA+CGG 0.618661 7.1:+69726222 None:intergenic
GGACTCATCAGGTTCACTTG+TGG 0.618888 7.1:-69722072 MS.gene88076:CDS
TATTAGAGAGACCAGCAGGT+TGG 0.619511 7.1:+69724613 None:intergenic
CTTATGGAGCATCACAGTGA+AGG 0.621938 7.1:-69726290 MS.gene88076:CDS
CTTATGGAGCATCACAGTGA+AGG 0.621938 7.1:-69726332 MS.gene88076:CDS
GAGTAGTTTACCATCTAACA+TGG 0.623707 7.1:-69721841 MS.gene88076:CDS
AAATGCTCGACTCAAAGAAG+AGG 0.627561 7.1:-69725330 MS.gene88076:intron
ACACTGCTGATCAGATCCAA+AGG 0.630792 7.1:-69726217 MS.gene88076:CDS
TCTACCGGTCATCTCGAAGG+AGG 0.660893 7.1:-69723497 MS.gene88076:intron
GAAGAGTCAGCCTAATGGTG+AGG 0.665543 7.1:-69723139 MS.gene88076:CDS
ACACGGAAATGCAGTTACCA+GGG 0.673209 7.1:+69722828 None:intergenic
AGCATGTCTTACCTTAAACA+CGG 0.679978 7.1:+69722811 None:intergenic
GATACTACAAGAAAGTTGCG+TGG 0.681208 7.1:-69722093 MS.gene88076:CDS
AATGATAATAATATTCAAGG+AGG 0.684472 7.1:-69721951 MS.gene88076:CDS
TGATTCATCAATAATGAGCG+AGG 0.688237 7.1:-69722036 MS.gene88076:CDS
CCATGATGAAGCTAACACAA+AGG 0.718830 7.1:-69723248 MS.gene88076:CDS
AACAACCGGAAGGAAGACGA+TGG 0.725479 7.1:+69723825 None:intergenic
CTTTGAATGAGATTACTGTG+AGG 0.784055 7.1:-69723161 MS.gene88076:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATAAATAAATAAATAA+AGG + chr7.1:69721951-69721970 None:intergenic 0.0%
!! TAAATAAATAAATAAATAAA+GGG + chr7.1:69721950-69721969 None:intergenic 0.0%
!! TTTATATAATGTATAAAAAC+GGG + chr7.1:69725455-69725474 None:intergenic 10.0%
!!! TAAAAACATTTTTTTTTTTC+TGG + chr7.1:69722995-69723014 None:intergenic 10.0%
!!! TAAAAGAATTTTAGAAATTA+AGG + chr7.1:69723259-69723278 None:intergenic 10.0%
!!! TCTTGTATATTTTAATTTAT+AGG - chr7.1:69724415-69724434 MS.gene88076:CDS 10.0%
!!! TTAAATATAGTTTAAAATTG+CGG - chr7.1:69723146-69723165 MS.gene88076:CDS 10.0%
!!! TTCTAATTTGATTTTTATTA+TGG + chr7.1:69725559-69725578 None:intergenic 10.0%
!!! TTGAAAATCATATTTTATTA+AGG + chr7.1:69725593-69725612 None:intergenic 10.0%
!! ACAAAAAAAAAAAAAAATGG+AGG + chr7.1:69725309-69725328 None:intergenic 15.0%
!! ATGTTGAAAAATTAGAATAT+TGG + chr7.1:69724038-69724057 None:intergenic 15.0%
!! ATTATTTATTCCCATATTAA+TGG + chr7.1:69725114-69725133 None:intergenic 15.0%
!! ATTTATGTGGTAAATTAAAA+TGG - chr7.1:69723342-69723361 MS.gene88076:intron 15.0%
!! CAAAAAAAAAAAAGTTTGTA+TGG - chr7.1:69723073-69723092 MS.gene88076:CDS 15.0%
!! CAAAATGATAATAATATTCA+AGG - chr7.1:69726139-69726158 MS.gene88076:intron 15.0%
!! TGTTGAAAAATTAGAATATT+GGG + chr7.1:69724037-69724056 None:intergenic 15.0%
!! TTTCTATTATGGTAAAATAT+AGG - chr7.1:69723183-69723202 MS.gene88076:CDS 15.0%
!! TTTGTTAATCTGAAAATATA+GGG - chr7.1:69725950-69725969 MS.gene88076:intron 15.0%
!!! AGATTGTGAATTAATTTTAT+AGG - chr7.1:69723108-69723127 MS.gene88076:CDS 15.0%
!!! AGGTATTTTATATAACAAAA+TGG + chr7.1:69725139-69725158 None:intergenic 15.0%
!!! ATTTTAATTTATAGGTTACT+TGG - chr7.1:69724423-69724442 MS.gene88076:CDS 15.0%
!!! TATATTTTACCATAATAGAA+AGG + chr7.1:69723184-69723203 None:intergenic 15.0%
!!! TTTTGTTAATCTGAAAATAT+AGG - chr7.1:69725949-69725968 MS.gene88076:intron 15.0%
!! AAATCTAAACTAACATTCTA+AGG + chr7.1:69722936-69722955 None:intergenic 20.0%
!! AATGATAATAATATTCAAGG+AGG - chr7.1:69726142-69726161 MS.gene88076:intron 20.0%
!! ATATTAATGGCTTAATCTAA+GGG + chr7.1:69725101-69725120 None:intergenic 20.0%
!! ATTAATTACACACTAATAGA+AGG + chr7.1:69722337-69722356 None:intergenic 20.0%
!! CAATTAAAAGTTAATTACCT+TGG + chr7.1:69724321-69724340 None:intergenic 20.0%
!! TAAAATACCTTAGAGTTAAA+AGG - chr7.1:69725149-69725168 MS.gene88076:intron 20.0%
!! TATAGAAATGTTATCTATAG+TGG - chr7.1:69724491-69724510 MS.gene88076:CDS 20.0%
!! TTAGATTAAGCCATTAATAT+GGG - chr7.1:69725101-69725120 MS.gene88076:intron 20.0%
!!! ACGAAAATTGTTTGTTTTTA+TGG + chr7.1:69725903-69725922 None:intergenic 20.0%
!!! AGATTTTGTAGTTTTCTTTT+TGG - chr7.1:69722950-69722969 MS.gene88076:intron 20.0%
!!! ATAGTTTTAAATTGTAGTTG+CGG - chr7.1:69724633-69724652 MS.gene88076:CDS 20.0%
!!! ATTTTAGATGTATTTTTGTG+CGG - chr7.1:69723997-69724016 MS.gene88076:intron 20.0%
!!! CGAAAATTGTTTGTTTTTAT+GGG + chr7.1:69725902-69725921 None:intergenic 20.0%
!!! CTATAAAATCTCATTTTTGT+TGG - chr7.1:69724345-69724364 MS.gene88076:intron 20.0%
!!! GATTTTGTAGTTTTCTTTTT+GGG - chr7.1:69722951-69722970 MS.gene88076:intron 20.0%
!!! TAAAAACAAACAATTTTCGT+CGG - chr7.1:69725903-69725922 MS.gene88076:intron 20.0%
!!! TAGATATAGAGACTATTTTT+AGG + chr7.1:69725404-69725423 None:intergenic 20.0%
!!! TATTACATGCACAATTTTAA+TGG - chr7.1:69722847-69722866 MS.gene88076:CDS 20.0%
!!! TCTTTTGAACTATATATAGA+AGG + chr7.1:69722210-69722229 None:intergenic 20.0%
!!! TGTTGTATTTTGTATTTATG+TGG - chr7.1:69723329-69723348 MS.gene88076:intron 20.0%
! AAAGAATAAGAAGTTCTTAC+AGG + chr7.1:69723757-69723776 None:intergenic 25.0%
! AAATACAACACATGTAAACA+TGG + chr7.1:69723319-69723338 None:intergenic 25.0%
! AACAGTTGCATTTCAAATTA+TGG - chr7.1:69726228-69726247 MS.gene88076:CDS 25.0%
! AGGAAGTAAAATTCTCTAAT+AGG + chr7.1:69724155-69724174 None:intergenic 25.0%
! CAATGTAAACCTTTCTATTA+TGG - chr7.1:69723172-69723191 MS.gene88076:CDS 25.0%
! CATATTAATGGCTTAATCTA+AGG + chr7.1:69725102-69725121 None:intergenic 25.0%
! CTTAGATTAAGCCATTAATA+TGG - chr7.1:69725100-69725119 MS.gene88076:intron 25.0%
! TAAACAATTTGAGAAAGGAT+GGG - chr7.1:69724184-69724203 MS.gene88076:CDS 25.0%
! TACTGTAAACAATTTGAGAA+AGG - chr7.1:69724179-69724198 MS.gene88076:CDS 25.0%
! TTAACTGATTATTAACCCTA+GGG + chr7.1:69723648-69723667 None:intergenic 25.0%
! TTGTAGTTAAAATGTTGTTG+CGG - chr7.1:69723230-69723249 MS.gene88076:CDS 25.0%
! TTTAACTGATTATTAACCCT+AGG + chr7.1:69723649-69723668 None:intergenic 25.0%
!! ACATTTTAAATGTGAAGAAG+TGG + chr7.1:69725852-69725871 None:intergenic 25.0%
!! CATTTTAAATGTGAAGAAGT+GGG + chr7.1:69725851-69725870 None:intergenic 25.0%
!! GCTGCAAATAACATTTTTAA+GGG + chr7.1:69722714-69722733 None:intergenic 25.0%
!! TGCTGCAAATAACATTTTTA+AGG + chr7.1:69722715-69722734 None:intergenic 25.0%
!!! AAGAAAACCTTTTAACTCTA+AGG + chr7.1:69725159-69725178 None:intergenic 25.0%
!!! AATTTTGGTTTCAGAATAGA+AGG - chr7.1:69722501-69722520 MS.gene88076:intron 25.0%
!!! ACTTTGCTTTTATTGAAACT+TGG + chr7.1:69723040-69723059 None:intergenic 25.0%
!!! CCACAATATAAATGTTTTAG+AGG - chr7.1:69724656-69724675 MS.gene88076:CDS 25.0%
!!! CCTCTAAAACATTTATATTG+TGG + chr7.1:69724659-69724678 None:intergenic 25.0%
!!! CTATTTGTTTTTGACACTTT+TGG - chr7.1:69722160-69722179 MS.gene88076:intron 25.0%
!!! GTAAACATGGTTTTAAATTG+CGG + chr7.1:69723306-69723325 None:intergenic 25.0%
!!! GTGTTTGATTTTATCCATAA+AGG + chr7.1:69723580-69723599 None:intergenic 25.0%
!!! TTTTATTGAAACTTGGTAGT+TGG + chr7.1:69723033-69723052 None:intergenic 25.0%
!!! TTTTTTTTCTGGTACAAAAG+AGG + chr7.1:69722984-69723003 None:intergenic 25.0%
AAATGGTATAAGGTCCTAAA+TGG + chr7.1:69725725-69725744 None:intergenic 30.0%
AACCAAAATTTGATCTTGGT+AGG + chr7.1:69722491-69722510 None:intergenic 30.0%
AAGAGAATATTGTGCATGTA+TGG + chr7.1:69722888-69722907 None:intergenic 30.0%
AGTTATATCTTCTCGAACAA+AGG - chr7.1:69723906-69723925 MS.gene88076:CDS 30.0%
ATTCAATGTGCAAGAGAAAT+TGG + chr7.1:69724067-69724086 None:intergenic 30.0%
ATTTCCAACTATTGTGACAA+TGG - chr7.1:69723870-69723889 MS.gene88076:CDS 30.0%
CAAATTGTTTACAGTAACGT+AGG + chr7.1:69724175-69724194 None:intergenic 30.0%
CAATGTTATGATATACGGAT+GGG - chr7.1:69721987-69722006 MS.gene88076:CDS 30.0%
CATATCCTGATGAAAAACAA+AGG - chr7.1:69722435-69722454 MS.gene88076:intron 30.0%
CATTCTCTTCTATGAGTATA+CGG + chr7.1:69722655-69722674 None:intergenic 30.0%
CCAATAAGTCCATTAACAAT+TGG + chr7.1:69726286-69726305 None:intergenic 30.0%
CTCATTATTGATGAATCAAC+AGG + chr7.1:69726055-69726074 None:intergenic 30.0%
CTGAAACCAAAATTTGATCT+TGG + chr7.1:69722495-69722514 None:intergenic 30.0%
CTTTATCTAAGTGTGGTTAT+TGG - chr7.1:69724784-69724803 MS.gene88076:intron 30.0%
GAGTTACTCTAAATGGTATA+AGG + chr7.1:69725735-69725754 None:intergenic 30.0%
GATTTCACAATGATTCTTTG+TGG - chr7.1:69722586-69722605 MS.gene88076:intron 30.0%
GCATGCAATGTTATGATATA+CGG - chr7.1:69721982-69722001 MS.gene88076:CDS 30.0%
GGTAGTAATTGAATGTATGA+AGG + chr7.1:69726088-69726107 None:intergenic 30.0%
GTAAACAATTTGAGAAAGGA+TGG - chr7.1:69724183-69724202 MS.gene88076:CDS 30.0%
TAACAATTAAGCTAAGCTCA+CGG + chr7.1:69725780-69725799 None:intergenic 30.0%
TACATTCAATTACTACCATC+AGG - chr7.1:69726091-69726110 MS.gene88076:intron 30.0%
TCTGTTAGAGTTACTCTAAA+TGG + chr7.1:69725742-69725761 None:intergenic 30.0%
TGAGCTTAGCTTAATTGTTA+GGG - chr7.1:69725780-69725799 MS.gene88076:intron 30.0%
TGGATAAAATCAAACACTGA+TGG - chr7.1:69723583-69723602 MS.gene88076:CDS 30.0%
TTCTATAGAGCATATGAACT+GGG + chr7.1:69724478-69724497 None:intergenic 30.0%
TTCTTGTCTTTATCTAAGTG+TGG - chr7.1:69724777-69724796 MS.gene88076:intron 30.0%
TTTCTATAGAGCATATGAAC+TGG + chr7.1:69724479-69724498 None:intergenic 30.0%
TTTCTTCTGATACTCATAAG+AGG - chr7.1:69721831-69721850 MS.gene88076:CDS 30.0%
! AAACAATTTTCGTCGGATTT+TGG - chr7.1:69725910-69725929 MS.gene88076:intron 30.0%
! ACAATGATTCTTTGTGGTTT+TGG - chr7.1:69722592-69722611 MS.gene88076:intron 30.0%
! ACACAATTCTTTTGCATTAG+TGG + chr7.1:69722812-69722831 None:intergenic 30.0%
! ATCCTACCAAGATCAAATTT+TGG - chr7.1:69722486-69722505 MS.gene88076:intron 30.0%
! TGTTTCTTCTAAGAGACTTA+TGG - chr7.1:69721787-69721806 MS.gene88076:CDS 30.0%
!! ATTTTATTTCCCATTCCTGA+GGG - chr7.1:69725335-69725354 MS.gene88076:CDS 30.0%
!! CCAATTGTTAATGGACTTAT+TGG - chr7.1:69726283-69726302 MS.gene88076:CDS 30.0%
!! CTCATTCAAAGTTGATATTG+TGG + chr7.1:69724923-69724942 None:intergenic 30.0%
!! GATTGATTTTGTAGAACAAG+TGG - chr7.1:69723839-69723858 MS.gene88076:CDS 30.0%
!! TATGTGTGTGTTTTAGACAT+GGG - chr7.1:69722545-69722564 MS.gene88076:intron 30.0%
!! TTATGTGTGTGTTTTAGACA+TGG - chr7.1:69722544-69722563 MS.gene88076:intron 30.0%
AACAATGATCCTCCAATGTT+TGG + chr7.1:69726208-69726227 None:intergenic 35.0%
AACAATTAAGCTAAGCTCAC+GGG + chr7.1:69725779-69725798 None:intergenic 35.0%
AAGAAATTGAACACAGTCTG+TGG + chr7.1:69725018-69725037 None:intergenic 35.0%
AAGCATTTCAACCAAAGTCA+AGG + chr7.1:69723728-69723747 None:intergenic 35.0%
ACAATGATCCTCCAATGTTT+GGG + chr7.1:69726207-69726226 None:intergenic 35.0%
ACAATTGTGGCTACATTTGT+CGG - chr7.1:69724690-69724709 MS.gene88076:CDS 35.0%
ACATTGTTTCGTAGGTTTCA+AGG + chr7.1:69723624-69723643 None:intergenic 35.0%
AGCATGTCTTACCTTAAACA+CGG + chr7.1:69725285-69725304 None:intergenic 35.0%
ATATCTTCTCGAACAAAGGA+TGG - chr7.1:69723910-69723929 MS.gene88076:CDS 35.0%
ATCGATCGATCTCCTTAAAA+GGG - chr7.1:69725698-69725717 MS.gene88076:intron 35.0%
ATTACACGCTTTCTCATGTT+TGG + chr7.1:69722125-69722144 None:intergenic 35.0%
ATTACCTTGGAATTGCCATT+AGG + chr7.1:69724308-69724327 None:intergenic 35.0%
CAAGGAGGTAATAGTGATAA+TGG - chr7.1:69726157-69726176 MS.gene88076:intron 35.0%
CACTTCAAAGAATGTGTGAA+AGG - chr7.1:69724546-69724565 MS.gene88076:CDS 35.0%
CTCAGGAATGGGAAATAAAA+TGG + chr7.1:69725336-69725355 None:intergenic 35.0%
CTCTTGAACATCATTACCAT+TGG + chr7.1:69725219-69725238 None:intergenic 35.0%
CTTCGTAAACACAACATTCA+TGG + chr7.1:69722263-69722282 None:intergenic 35.0%
CTTGCTTATCTTATGGATTC+TGG - chr7.1:69724569-69724588 MS.gene88076:CDS 35.0%
CTTTGAATGAGATTACTGTG+AGG - chr7.1:69724932-69724951 MS.gene88076:intron 35.0%
GAAAAACAAAGGTTGCAGTT+AGG - chr7.1:69722446-69722465 MS.gene88076:intron 35.0%
GACGTTGCATATTATATGCA+GGG - chr7.1:69725802-69725821 MS.gene88076:intron 35.0%
GACTTTGGTTGAAATGCTTA+TGG - chr7.1:69723729-69723748 MS.gene88076:intron 35.0%
GAGTAGTTTACCATCTAACA+TGG - chr7.1:69726252-69726271 MS.gene88076:CDS 35.0%
GAGTCTGTTCCAATTGTTAA+TGG - chr7.1:69726274-69726293 MS.gene88076:CDS 35.0%
GATCTGAGAATATAGCTATG+AGG - chr7.1:69722684-69722703 MS.gene88076:intron 35.0%
GCAATGTTATGATATACGGA+TGG - chr7.1:69721986-69722005 MS.gene88076:CDS 35.0%
GTGAGCTTAGCTTAATTGTT+AGG - chr7.1:69725779-69725798 MS.gene88076:intron 35.0%
GTGTGTGAAACTTTATCTTG+CGG + chr7.1:69724723-69724742 None:intergenic 35.0%
TAAAAATGCAATGCAAGAGC+TGG - chr7.1:69723531-69723550 MS.gene88076:CDS 35.0%
TAACTGCATTTCCGTGTTTA+AGG - chr7.1:69725271-69725290 MS.gene88076:intron 35.0%
TACAATATCAACCGCATCAA+GGG + chr7.1:69723215-69723234 None:intergenic 35.0%
TACTTGGATTGAACATGTTG+AGG - chr7.1:69724439-69724458 MS.gene88076:CDS 35.0%
TAGTCGAATGTACTTTCCAA+TGG - chr7.1:69725200-69725219 MS.gene88076:intron 35.0%
TATAGAAGGTCAACAACATC+TGG + chr7.1:69722196-69722215 None:intergenic 35.0%
TATCGATCGATCTCCTTAAA+AGG - chr7.1:69725697-69725716 MS.gene88076:intron 35.0%
TATGAGGAAACATGTATGTG+TGG - chr7.1:69722010-69722029 MS.gene88076:CDS 35.0%
TCAATTTCTTGAACGACGAA+AGG - chr7.1:69725028-69725047 MS.gene88076:intron 35.0%
TCTTAGTGGTTCTTTGCAAT+TGG - chr7.1:69723933-69723952 MS.gene88076:CDS 35.0%
TGATTCATCAATAATGAGCG+AGG - chr7.1:69726057-69726076 MS.gene88076:intron 35.0%
TGCAATCCAAAAAGACCTAA+CGG - chr7.1:69722291-69722310 MS.gene88076:intron 35.0%
TGGAAACTAATGAGCCTTTA+TGG - chr7.1:69723563-69723582 MS.gene88076:CDS 35.0%
TTCATCCAAAACATGCCTAA+TGG - chr7.1:69724290-69724309 MS.gene88076:intron 35.0%
! AATTGCCATTAGGCATGTTT+TGG + chr7.1:69724298-69724317 None:intergenic 35.0%
! ATCGAAGCTTCTAGAAATTC+TGG - chr7.1:69723685-69723704 MS.gene88076:intron 35.0%
! ATCTATAGTGGAGTTGCATT+TGG - chr7.1:69724503-69724522 MS.gene88076:CDS 35.0%
! ATTAGAGGACATGGCTTTTA+CGG - chr7.1:69722060-69722079 MS.gene88076:CDS 35.0%
! CAATGGTAATGATGTTCAAG+AGG - chr7.1:69725217-69725236 MS.gene88076:intron 35.0%
! CATTTTGCTACGAAATTTCG+AGG - chr7.1:69724245-69724264 MS.gene88076:intron 35.0%
! GATTTTGTAGAACAAGTGGA+TGG - chr7.1:69723843-69723862 MS.gene88076:CDS 35.0%
! TCAGAGCAACTTTTATGTGT+TGG + chr7.1:69726318-69726337 None:intergenic 35.0%
! TGAAAGGCTTGCTTATCTTA+TGG - chr7.1:69724562-69724581 MS.gene88076:CDS 35.0%
! TTATGGGTTAAGTAGTCTAG+TGG + chr7.1:69725886-69725905 None:intergenic 35.0%
! TTGCATTTGGAGCTGAAAAA+TGG - chr7.1:69724516-69724535 MS.gene88076:CDS 35.0%
! TTTGCTTGACGCAACTTTTA+GGG + chr7.1:69722098-69722117 None:intergenic 35.0%
!! CATGTTTTGGATGAAACAAC+CGG + chr7.1:69724285-69724304 None:intergenic 35.0%
!! CATTTTATTTCCCATTCCTG+AGG - chr7.1:69725334-69725353 MS.gene88076:CDS 35.0%
!!! TGCAACCTTTGTTTTTCATC+AGG + chr7.1:69722443-69722462 None:intergenic 35.0%
AAATGCTCGACTCAAAGAAG+AGG - chr7.1:69722763-69722782 MS.gene88076:intron 40.0%
AAATTGAACACAGTCTGTGG+AGG + chr7.1:69725015-69725034 None:intergenic 40.0%
AATTGAACACAGTCTGTGGA+GGG + chr7.1:69725014-69725033 None:intergenic 40.0%
ACAACAATGTCACGACTCAT+AGG - chr7.1:69722236-69722255 MS.gene88076:intron 40.0%
ACAAGCTCAAACCCAAACAT+TGG - chr7.1:69726193-69726212 MS.gene88076:intron 40.0%
AGAAGCTTCGATGCGAATAT+TGG + chr7.1:69723677-69723696 None:intergenic 40.0%
ATAGGAAAATGCCCTTGATG+CGG - chr7.1:69723201-69723220 MS.gene88076:CDS 40.0%
ATGATATACGGATGGGTATG+AGG - chr7.1:69721994-69722013 MS.gene88076:CDS 40.0%
ATGCATCAGCTAGTCATAGA+TGG - chr7.1:69724896-69724915 MS.gene88076:intron 40.0%
ATGTATGTGTGGATTTGACC+GGG - chr7.1:69722021-69722040 MS.gene88076:CDS 40.0%
ATGTGAAGAAGTGGGATGTT+CGG + chr7.1:69725843-69725862 None:intergenic 40.0%
CATGTATGTGTGGATTTGAC+CGG - chr7.1:69722020-69722039 MS.gene88076:CDS 40.0%
CCATGATGAAGCTAACACAA+AGG - chr7.1:69724845-69724864 MS.gene88076:intron 40.0%
CTACAATATCAACCGCATCA+AGG + chr7.1:69723216-69723235 None:intergenic 40.0%
CTACGAAACAATGTTCCCTA+GGG - chr7.1:69723630-69723649 MS.gene88076:CDS 40.0%
CTCCTTAAAAGGGTCCATTT+AGG - chr7.1:69725708-69725727 MS.gene88076:intron 40.0%
GAAGCTTCGATGCGAATATT+GGG + chr7.1:69723676-69723695 None:intergenic 40.0%
GAAGTAATTGCGAAACCTGA+TGG + chr7.1:69726109-69726128 None:intergenic 40.0%
GAATAGAAGGACTCAGATGA+AGG - chr7.1:69722514-69722533 MS.gene88076:intron 40.0%
GACAAATGTAGCCACAATTG+TGG + chr7.1:69724691-69724710 None:intergenic 40.0%
GATACTACAAGAAAGTTGCG+TGG - chr7.1:69726000-69726019 MS.gene88076:intron 40.0%
GATGAAGCTAACACAAAGGA+TGG - chr7.1:69724849-69724868 MS.gene88076:intron 40.0%
GCATATTATATGCAGGGATC+AGG - chr7.1:69725808-69725827 MS.gene88076:intron 40.0%
GGACGTTGCATATTATATGC+AGG - chr7.1:69725801-69725820 MS.gene88076:intron 40.0%
GGTCTTTGTAACCACAATTG+TGG - chr7.1:69724677-69724696 MS.gene88076:CDS 40.0%
GGTTTCGCAATTACTTCTGA+TGG - chr7.1:69726112-69726131 MS.gene88076:intron 40.0%
TAAGCGCATCTACTACCATT+TGG - chr7.1:69724980-69724999 MS.gene88076:intron 40.0%
TATCATGAACGCCTTGACTT+TGG - chr7.1:69723714-69723733 MS.gene88076:intron 40.0%
TTCGCCATTGTCACAATAGT+TGG + chr7.1:69723877-69723896 None:intergenic 40.0%
TTGATGAACTTCCTGGTAGA+AGG + chr7.1:69723441-69723460 None:intergenic 40.0%
TTTGATCTTGGTAGGATCCA+TGG + chr7.1:69722483-69722502 None:intergenic 40.0%
! CCTTTGTGTTAGCTTCATCA+TGG + chr7.1:69724848-69724867 None:intergenic 40.0%
! GTCCTAAATGGACCCTTTTA+AGG + chr7.1:69725713-69725732 None:intergenic 40.0%
! GTTTGCTTGACGCAACTTTT+AGG + chr7.1:69722099-69722118 None:intergenic 40.0%
! TTTTGGATGAAACAACCGGA+AGG + chr7.1:69724281-69724300 None:intergenic 40.0%
!! ATTCTAAGGCATGCAAGTGT+CGG + chr7.1:69722922-69722941 None:intergenic 40.0%
AACACGGAAATGCAGTTACC+AGG + chr7.1:69725269-69725288 None:intergenic 45.0%
AATGTTCCTTACCAACCTGC+TGG - chr7.1:69723469-69723488 MS.gene88076:intron 45.0%
ACAAAGGTTGCAGTTAGGCA+AGG - chr7.1:69722451-69722470 MS.gene88076:intron 45.0%
ACACGGAAATGCAGTTACCA+GGG + chr7.1:69725268-69725287 None:intergenic 45.0%
ACACTGCTGATCAGATCCAA+AGG - chr7.1:69721876-69721895 MS.gene88076:CDS 45.0%
ACTCTTACGCTTCAAGCCTT+TGG + chr7.1:69721895-69721914 None:intergenic 45.0%
AGCTCAAACCCAAACATTGG+AGG - chr7.1:69726196-69726215 MS.gene88076:intron 45.0%
AGGTCAACAACATCTGGTGT+TGG + chr7.1:69722190-69722209 None:intergenic 45.0%
ATAGCAAATGTTTCGCACCC+TGG - chr7.1:69725248-69725267 MS.gene88076:intron 45.0%
ATCATGGTCCTCTTTCCATC+AGG + chr7.1:69724832-69724851 None:intergenic 45.0%
ATGGATTCTGGCCATTCTAC+CGG - chr7.1:69724581-69724600 MS.gene88076:CDS 45.0%
CATGCCTAATGGCAATTCCA+AGG - chr7.1:69724301-69724320 MS.gene88076:intron 45.0%
CCTACGAAACAATGTTCCCT+AGG - chr7.1:69723629-69723648 MS.gene88076:CDS 45.0%
CCTAGGGAACATTGTTTCGT+AGG + chr7.1:69723632-69723651 None:intergenic 45.0%
CGACGAAAGGAAAAGATCTC+AGG - chr7.1:69725041-69725060 MS.gene88076:intron 45.0%
GGAACAGACTCCATGTTAGA+TGG + chr7.1:69726265-69726284 None:intergenic 45.0%
GGGTTAAGTAGTCTAGTGGT+TGG + chr7.1:69725882-69725901 None:intergenic 45.0%
GGTCAACAACATCTGGTGTT+GGG + chr7.1:69722189-69722208 None:intergenic 45.0%
GTTAGGCAAGGAATTAGCCA+TGG - chr7.1:69722463-69722482 MS.gene88076:intron 45.0%
TATTAGAGAGACCAGCAGGT+TGG + chr7.1:69723483-69723502 None:intergenic 45.0%
TCAGTGATTCCATCACCTGA+TGG - chr7.1:69724814-69724833 MS.gene88076:intron 45.0%
TCCTTATTAGAGAGACCAGC+AGG + chr7.1:69723487-69723506 None:intergenic 45.0%
TGACAACAAACTGCACCGTT+AGG + chr7.1:69722309-69722328 None:intergenic 45.0%
TGTGAAGAAGTGGGATGTTC+GGG + chr7.1:69725842-69725861 None:intergenic 45.0%
TTCCATCACCTGATGGAAAG+AGG - chr7.1:69724821-69724840 MS.gene88076:intron 45.0%
TTTACCACTCGTGGGATTAG+AGG - chr7.1:69722045-69722064 MS.gene88076:CDS 45.0%
! ACCTGCTGGTCTCTCTAATA+AGG - chr7.1:69723483-69723502 MS.gene88076:intron 45.0%
! ACTGCACCGTTAGGTCTTTT+TGG + chr7.1:69722300-69722319 None:intergenic 45.0%
! AGAGTATCTAGCATTGCAGC+TGG - chr7.1:69723391-69723410 MS.gene88076:intron 45.0%
! CGAACAAAGGATGGTCTTAG+TGG - chr7.1:69723919-69723938 MS.gene88076:CDS 45.0%
! CTTATGGAGCATCACAGTGA+AGG - chr7.1:69721803-69721822 MS.gene88076:CDS 45.0%
! GGCAATGTTGATGAACTTCC+TGG + chr7.1:69723448-69723467 None:intergenic 45.0%
!! GCAGGTTGGTAAGGAACATT+TGG + chr7.1:69723469-69723488 None:intergenic 45.0%
!!! GCAAGAGCTGGTTTTGCTTA+TGG - chr7.1:69723543-69723562 MS.gene88076:CDS 45.0%
!! TAAACAAAAAAAAAAAAAAA+TGG + chr7.1:69725312-69725331 None:intergenic 5.0%
!!! ACTTTTTTATTTTATTTTTT+AGG - chr7.1:69722396-69722415 MS.gene88076:intron 5.0%
!!! ATTGAAATTTAATAATTTTA+GGG - chr7.1:69725479-69725498 MS.gene88076:intron 5.0%
!!! CTTTTTTATTTTATTTTTTA+GGG - chr7.1:69722397-69722416 MS.gene88076:intron 5.0%
!!! TATTGAAATTTAATAATTTT+AGG - chr7.1:69725478-69725497 MS.gene88076:intron 5.0%
!!! TTTTATATAATGTATAAAAA+CGG + chr7.1:69725456-69725475 None:intergenic 5.0%
AAACGGGTCGCTAGTACATG+TGG + chr7.1:69725439-69725458 None:intergenic 50.0%
AACAACCGGAAGGAAGACGA+TGG + chr7.1:69724271-69724290 None:intergenic 50.0%
ACTCGTGGGATTAGAGGACA+TGG - chr7.1:69722051-69722070 MS.gene88076:CDS 50.0%
AGCATTGCAGCTGGATACAC+TGG - chr7.1:69723400-69723419 MS.gene88076:intron 50.0%
ATCCCACGAGTGGTAAAACC+CGG + chr7.1:69722042-69722061 None:intergenic 50.0%
ATGTCCTCTAATCCCACGAG+TGG + chr7.1:69722052-69722071 None:intergenic 50.0%
CATTCTACCGGTCATCTCGA+AGG - chr7.1:69724593-69724612 MS.gene88076:CDS 50.0%
CTTCGAGATGACCGGTAGAA+TGG + chr7.1:69724595-69724614 None:intergenic 50.0%
GAAAGTTGCGTGGACTCATC+AGG - chr7.1:69726010-69726029 MS.gene88076:intron 50.0%
GAAGAGTCAGCCTAATGGTG+AGG - chr7.1:69724954-69724973 MS.gene88076:intron 50.0%
GGACTCATCAGGTTCACTTG+TGG - chr7.1:69726021-69726040 MS.gene88076:intron 50.0%
GGATCTGATCAGCAGTGTGA+CGG + chr7.1:69721874-69721893 None:intergenic 50.0%
GTCCTCTTTCCATCAGGTGA+TGG + chr7.1:69724826-69724845 None:intergenic 50.0%
GTGAGGAAGAGTCAGCCTAA+TGG - chr7.1:69724949-69724968 MS.gene88076:intron 50.0%
TCACTGTCACACCTTCTACC+AGG - chr7.1:69723427-69723446 MS.gene88076:intron 50.0%
TCAGCTCAACTGTGACGTAG+AGG - chr7.1:69725364-69725383 MS.gene88076:CDS 50.0%
TGAAGAACGCCCTCAGGAAT+GGG + chr7.1:69725347-69725366 None:intergenic 50.0%
AACACAGTCTGTGGAGGGAG+AGG + chr7.1:69725009-69725028 None:intergenic 55.0%
CTGAAGAACGCCCTCAGGAA+TGG + chr7.1:69725348-69725367 None:intergenic 55.0%
GCGCTTAGCACCTCACCATT+AGG + chr7.1:69724967-69724986 None:intergenic 55.0%
GCTACCTCCTTCGAGATGAC+CGG + chr7.1:69724603-69724622 None:intergenic 55.0%
TCTACCGGTCATCTCGAAGG+AGG - chr7.1:69724596-69724615 MS.gene88076:CDS 55.0%
TGGAGGGAGAGGTAGCCAAA+TGG + chr7.1:69724998-69725017 None:intergenic 55.0%
TTGAGCTGAAGAACGCCCTC+AGG + chr7.1:69725353-69725372 None:intergenic 55.0%
! GACCGGGTTTTACCACTCGT+GGG - chr7.1:69722037-69722056 MS.gene88076:CDS 55.0%
! TGACCGGGTTTTACCACTCG+TGG - chr7.1:69722036-69722055 MS.gene88076:CDS 55.0%
!! GAGAGACCAGCAGGTTGGTA+AGG + chr7.1:69723478-69723497 None:intergenic 55.0%
CGAGGCCATCGTCTTCCTTC+CGG - chr7.1:69724263-69724282 MS.gene88076:intron 60.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 69721764 69726351 69721764 ID=MS.gene88076
chr7.1 mRNA 69721764 69726351 69721764 ID=MS.gene88076.t1;Parent=MS.gene88076
chr7.1 exon 69726209 69726351 69726209 ID=MS.gene88076.t1.exon1;Parent=MS.gene88076.t1
chr7.1 CDS 69726209 69726351 69726209 ID=cds.MS.gene88076.t1;Parent=MS.gene88076.t1
chr7.1 exon 69725580 69725697 69725580 ID=MS.gene88076.t1.exon2;Parent=MS.gene88076.t1
chr7.1 CDS 69725580 69725697 69725580 ID=cds.MS.gene88076.t1;Parent=MS.gene88076.t1
chr7.1 exon 69725331 69725486 69725331 ID=MS.gene88076.t1.exon3;Parent=MS.gene88076.t1
chr7.1 CDS 69725331 69725486 69725331 ID=cds.MS.gene88076.t1;Parent=MS.gene88076.t1
chr7.1 exon 69724359 69724730 69724359 ID=MS.gene88076.t1.exon4;Parent=MS.gene88076.t1
chr7.1 CDS 69724359 69724730 69724359 ID=cds.MS.gene88076.t1;Parent=MS.gene88076.t1
chr7.1 exon 69724161 69724262 69724161 ID=MS.gene88076.t1.exon5;Parent=MS.gene88076.t1
chr7.1 CDS 69724161 69724262 69724161 ID=cds.MS.gene88076.t1;Parent=MS.gene88076.t1
chr7.1 exon 69723793 69723999 69723793 ID=MS.gene88076.t1.exon6;Parent=MS.gene88076.t1
chr7.1 CDS 69723793 69723999 69723793 ID=cds.MS.gene88076.t1;Parent=MS.gene88076.t1
chr7.1 exon 69723498 69723678 69723498 ID=MS.gene88076.t1.exon7;Parent=MS.gene88076.t1
chr7.1 CDS 69723498 69723678 69723498 ID=cds.MS.gene88076.t1;Parent=MS.gene88076.t1
chr7.1 exon 69723053 69723297 69723053 ID=MS.gene88076.t1.exon8;Parent=MS.gene88076.t1
chr7.1 CDS 69723053 69723297 69723053 ID=cds.MS.gene88076.t1;Parent=MS.gene88076.t1
chr7.1 exon 69722823 69722912 69722823 ID=MS.gene88076.t1.exon9;Parent=MS.gene88076.t1
chr7.1 CDS 69722823 69722912 69722823 ID=cds.MS.gene88076.t1;Parent=MS.gene88076.t1
chr7.1 exon 69721764 69722144 69721764 ID=MS.gene88076.t1.exon10;Parent=MS.gene88076.t1
chr7.1 CDS 69721764 69722144 69721764 ID=cds.MS.gene88076.t1;Parent=MS.gene88076.t1
Gene Sequence

>MS.gene88076

ATGGAGCATCACAGTGAAGGAAGTGTTTCTTCTAAGAGACTTATGGAGCATCACAGTGAAGGAAGTGTTTCTTCTGATACTCATAAGAGGAAGAAACGTCGTTGCAACCGTCACACTGCTGATCAGATCCAAAGGCTTGAAGCGTAAGAGTTCTATCTCTGTTAAAAATCTATTATTTTTGCACCCTTTATTTATTTATTTATTTATACGACACTTATGCATGCAATGTTATGATATACGGATGGGTATGAGGAAACATGTATGTGTGGATTTGACCGGGTTTTACCACTCGTGGGATTAGAGGACATGGCTTTTACGGTATTACAGACATCCCTAAAAGTTGCGTCAAGCAAACATGCCAAACATGAGAAAGCGTGTAATCAACATGTTTTTATACTATTTGTTTTTGACACTTTTGGCTTCCCAACACCAGATGTTGTTGACCTTCTATATATAGTTCAAAAGATCATGCACAACAATGTCACGACTCATAGGTCCATGAATGTTGTGTTTACGAAGATTGAGTTTGCAATCCAAAAAGACCTAACGGTGCAGTTTGTTGTCAGTTTACCTTCTATTAGTGTGTAATTAATCTTTGATATAATAGTTTTTAATATATAATAGTTTATACGACTTTTTTATTTTATTTTTTAGGGTGTTTAAGACATGTTCATATCCTGATGAAAAACAAAGGTTGCAGTTAGGCAAGGAATTAGCCATGGATCCTACCAAGATCAAATTTTGGTTTCAGAATAGAAGGACTCAGATGAAGGTATTTAATTATGTGTGTGTTTTAGACATGGGATTATCATATTTATTTGTGATTTCACAATGATTCTTTGTGGTTTTGGTTTGAACAAAACAGACACAACAAGAAAGAGATGATAACCGTATACTCATAGAAGAGAATGATAAAATAAGATCTGAGAATATAGCTATGAGGCAAGCCCTTAAAAATGTTATTTGCAGCACTTGTGATGAACAAAAGTTGAGAATTGAAAATGCTCGACTCAAAGAAGAGGTACGTAAATAATTAGTACAATATCCACTAATGCAAAAGAATTGTGTGTATTCATTCTTATTTATTACATGCACAATTTTAATGGTTAAATATGTTTAGTCCATACATGCACAATATTCTCTTTGATGACATATCCGACACTTGCATGCCTTAGAATGTTAGTTTAGATTTTGTAGTTTTCTTTTTGGGCTTTTGTCCTCTTTTGTACCAGAAAAAAAAAAATGTTTTTAAATCTTTTAATACTACCAACTACCAAGTTTCAATAAAAGCAAAGTAAGTGCTAAAATTCAAAAAAAAAAAAGTTTGTATGGACTAAACTTTAAAGATTGTGAATTAATTTTATAGGACAACAAAAAAAAAATTAAATATAGTTTAAAATTGCGGTTACAATGTAAACCTTTCTATTATGGTAAAATATAGGAAAATGCCCTTGATGCGGTTGATATTGTAGTTAAAATGTTGTTGCGGAGACCTTAATTTCTAAAATTCTTTTATAATGCTTTTGCTTGTAGTGCACACCGCAATTTAAAACCATGTTTACATGTGTTGTATTTTGTATTTATGTGGTAAATTAAAATGGTGATTTGTGAACTTCTGTAGCTTGTTAGAGTATCTAGCATTGCAGCTGGATACACTGGAAAATCACTGTCACACCTTCTACCAGGAAGTTCATCAACATTGCCAAATGTTCCTTACCAACCTGCTGGTCTCTCTAATAAGGAAAAATCACTCATGTTTGAAATTGCTAAAAATGCAATGCAAGAGCTGGTTTTGCTTATGGAAACTAATGAGCCTTTATGGATAAAATCAAACACTGATGGAAGAGATACTCTTAACCTTGAAACCTACGAAACAATGTTCCCTAGGGTTAATAATCAGTTAAAGAATCCCAATATTCGCATCGAAGCTTCTAGAAATTCTGGTGATGTTATCATGAACGCCTTGACTTTGGTTGAAATGCTTATGGATCCTGTAAGAACTTCTTATTCTTTAGTGTTTTTTTAGATTTGAATTCACTAATTCAATTTAGTTAACTTAATTAAGCAAATTTAATGATTGATTTTGTAGAACAAGTGGATGGAGCTATTTCCAACTATTGTGACAATGGCGAAGACTATTGAAGTTATATCTTCTCGAACAAAGGATGGTCTTAGTGGTTCTTTGCAATTGGTATGATTAATTTTTTTTTGTCGTTCGATTAGACTAACACTTATTTTAGATGTATTTTTGTGCGGTGTTTCTATACGATCCCAATATTCTAATTTTTCAACATGCATTGCCAATTTCTCTTGCACATTGAATTAATTTTCATTCAATATTTATTTTTTTAGATGTATGAAGAGTTGCAAGTGCTTTCATCACTTGTTCCTATTAGAGAATTTTACTTCCTACGTTACTGTAAACAATTTGAGAAAGGATGGGCAATAGTTGATGTTTCATATGAATTTCGTCATAACAAACATTTTGCTACGAAATTTCGAGGCCATCGTCTTCCTTCCGGTTGTTTCATCCAAAACATGCCTAATGGCAATTCCAAGGTAATTAACTTTTAATTGAACACTATAAAATCTCATTTTTGTTGGACACAATTTATTATTACATTAATATATATGAAGTATTTTTGAGTCACTCTTGTATATTTTAATTTATAGGTTACTTGGATTGAACATGTTGAGGTTGAAGACATAAACCCAGTTCATATGCTCTATAGAAATGTTATCTATAGTGGAGTTGCATTTGGAGCTGAAAAATGGCTCACTACACTTCAAAGAATGTGTGAAAGGCTTGCTTATCTTATGGATTCTGGCCATTCTACCGGTCATCTCGAAGGAGGTAGCGATATAATTTATAGTTTTAAATTGTAGTTGCGGCCACAATATAAATGTTTTAGAGGTCTTTGTAACCACAATTGTGGCTACATTTGTCGGTATTTTACCGCAAGATAAAGTTTCACACACACATATTGCAAGAATTTCGATCATATATTTAATTTTCTTGTCTTTATCTAAGTGTGGTTATTGGAATTTTTTCAGTGATTCCATCACCTGATGGAAAGAGGACCATGATGAAGCTAACACAAAGGATGGTAACTAATTTCTGTGAAAGTATAAATGCATCAGCTAGTCATAGATGGACCACAATATCAACTTTGAATGAGATTACTGTGAGGAAGAGTCAGCCTAATGGTGAGGTGCTAAGCGCATCTACTACCATTTGGCTACCTCTCCCTCCACAGACTGTGTTCAATTTCTTGAACGACGAAAGGAAAAGATCTCAGGTTTGTTATCGATATACGCTATTATTCAAAATATACCCTTAGATTAAGCCATTAATATGGGAATAAATAATGACCATTTTGTTATATAAAATACCTTAGAGTTAAAAGGTTTTCTTATTATCATTATTTTTGTTGCTTAGTCGAATGTACTTTCCAATGGTAATGATGTTCAAGAGGTTGTTCGTATAGCAAATGTTTCGCACCCTGGTAACTGCATTTCCGTGTTTAAGGTAAGACATGCTTCCTCCATTTTTTTTTTTTTTTGTTTATCCATTTTATTTCCCATTCCTGAGGGCGTTCTTCAGCTCAACTGTGACGTAGAGGTCACAAGTTCAAATCCTAAAAATAGTCTCTATATCTACAAAAGTAAGAACCACATGTACTAGCGACCCGTTTTTATACATTATATAAAAAATATTGAAATTTAATAATTTTAGGGATTTATTTTTTTAAAGATTTTTAAGAAAAGCATAAACTACTTTGTATTTGTCTACCATAATAAAAATCAAATTAGAAAAAAAAGTAATCCTTAATAAAATATGATTTTCAATAGAAACAACTAAAAATAGCTTCTCATTTGAAATATTTTTGAGATTTTGTTTCTAGAGAACTTCTAACAAAAGAGTTTTTCTAATATCGATCGATCTCCTTAAAAGGGTCCATTTAGGACCTTATACCATTTAGAGTAACTCTAACAGATAAATGTCGTCGATCCCGTGAGCTTAGCTTAATTGTTAGGGACGTTGCATATTATATGCAGGGATCAGGTTTCGAATCCCGAACATCCCACTTCTTCACATTTAAAATGTGTGAACTCCAACCACTAGACTACTTAACCCATAAAAACAAACAATTTTCGTCGGATTTTGGTTTTGTTTCTAATGTATTTTGTTAATCTGAAAATATAGGGTTTCAACACAAGTAACAACAACATGTTGATACTACAAGAAAGTTGCGTGGACTCATCAGGTTCACTTGTGGTGTCTTGTCCTGTTGATTCATCAATAATGAGCGAGGTAGATCCTTCATACATTCAATTACTACCATCAGGTTTCGCAATTACTTCTGATGGAAAGCAAAATGATAATAATATTCAAGGAGGTAATAGTGATAATGGTGATGTTGCATCAACAAGCTCAAACCCAAACATTGGAGGATCATTGTTAACAGTTGCATTTCAAATTATGGTGAGTAGTTTACCATCTAACATGGAGTCTGTTCCAATTGTTAATGGACTTATTGGTAAGACTGTCCAACACATAAAAGTTGCTCTGAATTGTCCTATGTAG
Protein sequence

>MS.gene88076.t1

MEHHSEGSVSSKRLMEHHSEGSVSSDTHKRKKRRCNRHTADQIQRLEAVFKTCSYPDEKQRLQLGKELAMDPTKIKFWFQNRRTQMKTQQERDDNRILIEENDKIRSENIAMRQALKNVICSTCDEQKLRIENARLKEELVRVSSIAAGYTGKSLSHLLPGSSSTLPNVPYQPAGLSNKEKSLMFEIAKNAMQELVLLMETNEPLWIKSNTDGRDTLNLETYETMFPRVNNQLKNPNIRIEASRNSGDVIMNALTLVEMLMDPNKWMELFPTIVTMAKTIEVISSRTKDGLSGSLQLMYEELQVLSSLVPIREFYFLRYCKQFEKGWAIVDVSYEFRHNKHFATKFRGHRLPSGCFIQNMPNGNSKVTWIEHVEVEDINPVHMLYRNVIYSGVAFGAEKWLTTLQRMCERLAYLMDSGHSTGHLEGVIPSPDGKRTMMKLTQRMVTNFCESINASASHRWTTISTLNEITVRKSQPNGEVLSASTTIWLPLPPQTVFNFLNDERKRSQSNVLSNGNDVQEVVRIANVSHPGNCISVFKGFNTSNNNMLILQESCVDSSGSLVVSCPVDSSIMSEVDPSYIQLLPSGFAITSDGKQNDNNIQGGNSDNGDVASTSSNPNIGGSLLTVAFQIMVSSLPSNMESVPIVNGLIGKTVQHIKVALNCPM