AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene88080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene88080.t1 MTR_7g427710 66.745 427 95 8 4 404 3 408 0.0 539
MS.gene88080.t1 MTR_6g477820 58.998 439 115 6 7 383 21 456 5.12e-170 496
MS.gene88080.t1 MTR_7g427690 73.929 280 59 5 125 391 26 304 1.79e-136 400
MS.gene88080.t1 MTR_7g427700 61.644 292 75 6 3 271 2 279 8.10e-108 327
MS.gene88080.t1 MTR_7g076080 41.204 432 189 9 18 385 91 521 8.55e-98 311
MS.gene88080.t1 MTR_2g088470 42.308 416 187 9 18 383 67 479 7.00e-96 305
MS.gene88080.t1 MTR_8g432540 39.819 442 196 7 18 391 115 554 9.67e-96 306
MS.gene88080.t1 MTR_4g047800 40.465 430 204 9 4 383 44 471 2.12e-95 303
MS.gene88080.t1 MTR_5g029320 39.865 444 202 12 7 387 78 519 5.89e-95 304
MS.gene88080.t1 MTR_2g101720 36.667 420 232 9 22 409 143 560 6.38e-85 277
MS.gene88080.t1 MTR_2g030570 38.191 398 198 9 25 381 47 437 4.70e-77 254
MS.gene88080.t1 MTR_2g030600 37.688 398 198 10 25 381 47 435 3.72e-72 241
MS.gene88080.t1 MTR_0198s0030 33.641 434 214 8 22 383 59 490 3.25e-71 239
MS.gene88080.t1 MTR_2g030660 37.306 386 213 9 20 381 17 397 6.85e-70 234
MS.gene88080.t1 MTR_7g027265 80.597 134 13 1 4 124 3 136 9.89e-69 215
MS.gene88080.t1 MTR_1g101280 33.484 442 215 14 18 385 56 492 1.73e-58 205
MS.gene88080.t1 MTR_5g005600 33.086 405 214 10 27 384 70 464 1.42e-56 199
MS.gene88080.t1 MTR_7g027605 90.110 91 6 1 241 328 1 91 2.62e-52 171
MS.gene88080.t1 MTR_5g046040 53.147 143 53 2 18 146 33 175 2.30e-38 143
MS.gene88080.t1 MTR_2g083350 36.757 185 107 4 201 380 97 276 1.76e-28 118
MS.gene88080.t1 MTR_2g083330 38.012 171 100 3 211 380 103 268 2.69e-28 117
MS.gene88080.t1 MTR_7g427670 64.368 87 20 1 59 145 32 107 9.09e-28 107
MS.gene88080.t1 MTR_7g027245 70.833 72 20 1 167 237 16 87 1.21e-24 98.6
MS.gene88080.t1 MTR_0653s0020 77.419 62 13 1 331 391 1 62 8.08e-24 99.0
MS.gene88080.t1 MTR_2g451350 40.945 127 73 2 173 298 8 133 4.88e-22 92.0
MS.gene88080.t1 MTR_6g027290 38.017 121 69 3 26 144 49 165 9.70e-20 87.0
MS.gene88080.t1 MTR_2g451350 48.333 60 31 0 239 298 35 94 2.09e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene88080.t1 AT1G73360 46.528 432 165 7 18 385 32 461 2.37e-124 378
MS.gene88080.t1 AT1G17920 47.857 420 162 7 21 385 24 441 3.31e-120 367
MS.gene88080.t1 AT1G17920 47.857 420 162 7 21 385 24 441 3.31e-120 367
MS.gene88080.t1 AT4G04890 42.206 417 187 9 18 383 62 475 5.20e-96 305
MS.gene88080.t1 AT4G04890 42.206 417 187 9 18 383 62 475 5.20e-96 305
MS.gene88080.t1 AT4G00730 41.093 421 188 10 18 385 134 547 3.19e-95 298
MS.gene88080.t1 AT4G21750 40.235 425 192 8 18 383 62 483 5.09e-94 300
MS.gene88080.t1 AT4G21750 40.235 425 192 8 18 383 62 483 5.09e-94 300
MS.gene88080.t1 AT4G21750 40.235 425 192 8 18 383 62 483 5.09e-94 300
MS.gene88080.t1 AT4G21750 40.235 425 192 8 18 383 62 483 5.09e-94 300
MS.gene88080.t1 AT4G00730 41.093 421 188 10 18 385 134 547 2.21e-93 300
MS.gene88080.t1 AT1G05230 39.437 426 201 8 7 383 50 467 7.14e-89 283
MS.gene88080.t1 AT1G05230 39.437 426 201 8 7 383 50 467 2.10e-88 285
MS.gene88080.t1 AT1G05230 39.437 426 201 8 7 383 50 467 2.10e-88 285
MS.gene88080.t1 AT1G05230 39.437 426 201 8 7 383 50 467 2.10e-88 285
MS.gene88080.t1 AT1G05230 39.437 426 201 8 7 383 50 467 2.10e-88 285
MS.gene88080.t1 AT1G05230 39.437 426 201 8 7 383 50 467 2.10e-88 285
MS.gene88080.t1 AT1G05230 39.437 426 201 8 7 383 50 467 2.10e-88 285
MS.gene88080.t1 AT1G05230 39.437 426 201 8 7 383 50 467 2.10e-88 285
MS.gene88080.t1 AT1G05230 39.437 426 201 8 7 383 50 467 2.10e-88 285
MS.gene88080.t1 AT1G05230 39.437 426 201 8 7 383 50 467 2.10e-88 285
MS.gene88080.t1 AT1G05230 39.437 426 201 8 7 383 50 467 2.10e-88 285
MS.gene88080.t1 AT1G05230 39.437 426 201 8 7 383 50 467 2.70e-88 284
MS.gene88080.t1 AT5G52170 40.576 382 197 10 22 385 61 430 1.57e-81 266
MS.gene88080.t1 AT5G52170 40.576 382 197 10 22 385 61 430 1.65e-81 266
MS.gene88080.t1 AT5G52170 40.576 382 197 10 22 385 61 430 1.65e-81 266
MS.gene88080.t1 AT1G79840 36.156 437 213 13 13 411 96 504 3.72e-79 255
MS.gene88080.t1 AT1G79840 37.470 411 203 12 13 385 96 490 2.61e-78 256
MS.gene88080.t1 AT3G03260 36.253 411 211 7 23 383 28 437 4.63e-78 253
MS.gene88080.t1 AT1G79840 37.470 411 203 12 13 385 38 432 9.17e-78 256
MS.gene88080.t1 AT1G79840 37.470 411 203 12 13 385 38 432 9.17e-78 256
MS.gene88080.t1 AT4G17710 39.950 403 188 13 18 387 88 469 1.23e-77 256
MS.gene88080.t1 AT1G79840 37.470 411 203 12 13 385 96 490 2.49e-77 256
MS.gene88080.t1 AT1G79840 37.288 413 205 12 13 387 125 521 5.47e-77 256
MS.gene88080.t1 AT3G03260 36.253 411 211 7 23 383 28 437 1.14e-76 253
MS.gene88080.t1 AT2G32370 36.235 425 226 9 4 385 54 476 7.92e-72 241
MS.gene88080.t1 AT5G17320 35.886 457 208 13 7 384 14 464 6.56e-68 230
MS.gene88080.t1 AT1G34650 35.240 437 201 11 25 383 23 455 2.66e-63 218
MS.gene88080.t1 AT3G61150 42.972 249 135 6 139 385 299 542 1.92e-56 200
MS.gene88080.t1 AT3G61150 48.889 135 56 1 18 139 110 244 1.02e-34 138
MS.gene88080.t1 AT5G46880 33.405 467 198 16 18 387 111 561 2.61e-56 200
MS.gene88080.t1 AT5G46880 33.405 467 198 16 18 387 111 561 2.61e-56 200
MS.gene88080.t1 AT5G46880 33.405 467 198 16 18 387 111 561 2.61e-56 200
MS.gene88080.t1 AT4G25530 31.643 414 236 10 12 385 34 440 2.60e-51 184
MS.gene88080.t1 AT5G07260 27.974 311 193 12 72 377 11 295 1.67e-20 94.7
MS.gene88080.t1 AT5G07260 27.974 311 193 12 72 377 11 295 1.92e-20 94.4

Find 86 sgRNAs with CRISPR-Local

Find 313 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAGGCTTGCTTATCTTTA+TGG 0.090984 7.1:+69774118 MS.gene88080:CDS
GACTTTGGTTGAAATGTTTA+TGG 0.116059 7.1:+69773289 MS.gene88080:CDS
ATGTTTGGTTTCAGAATAAA+AGG 0.228121 7.1:+69769999 MS.gene88080:CDS
GAGGAGGTTTGCTAATCTTT+AGG 0.242607 7.1:-69775149 None:intergenic
CCTAGGGAACATTGTTTCAT+AGG 0.285822 7.1:-69773189 None:intergenic
AATAGCCATTACGCATGTTT+TGG 0.301933 7.1:-69773851 None:intergenic
TTGATTGTGGAGGCTTCTTC+AGG 0.317786 7.1:+69775241 MS.gene88080:CDS
CATACCTTCAACCCGTTACT+TGG 0.318720 7.1:+69772218 MS.gene88080:CDS
AGGAGGTTTGCTAATCTTTA+GGG 0.319034 7.1:-69775148 None:intergenic
ATCAATAGTGAAGTTGCATT+TGG 0.327865 7.1:+69774058 MS.gene88080:CDS
CGAGGCCATCGTCTTCCTTC+CGG 0.346534 7.1:+69773819 MS.gene88080:CDS
TTTGCCATTGTCACAATAGT+TGG 0.352656 7.1:-69773437 None:intergenic
TATTGATCTGCCACTGAATC+TGG 0.364883 7.1:-69772194 None:intergenic
AGGAAGTAGAATTCTCTAAT+AGG 0.366094 7.1:-69773717 None:intergenic
CCAAGTCTCCTATCATTAAC+TGG 0.382924 7.1:+69775172 MS.gene88080:CDS
GAAGCTTTGATGCGAATATT+CGG 0.390241 7.1:-69773233 None:intergenic
TCTTAGTGGTTCTTTCCAAT+TGG 0.402110 7.1:+69773496 MS.gene88080:CDS
CTCCTAGACAGATCGATGTT+TGG 0.403168 7.1:+69769984 MS.gene88080:CDS
CTGGTTTCGTCCCAAGTAAC+GGG 0.406535 7.1:-69772229 None:intergenic
TGGACGAAAGTTGACACTTC+TGG 0.411207 7.1:+69775192 MS.gene88080:CDS
CGAACGAAGGATGGTCTTAG+TGG 0.418990 7.1:+69773482 MS.gene88080:CDS
CATAACAAACATTTATTTCG+AGG 0.422591 7.1:+69773801 MS.gene88080:CDS
ACTTTCGTCCAGTTAATGAT+AGG 0.426724 7.1:-69775180 None:intergenic
AACATAGGTTGCAGTTAAGC+AGG 0.427466 7.1:+69769948 MS.gene88080:intron
AGGCTCATTAGTTTCCATAT+AGG 0.432664 7.1:-69773117 None:intergenic
AAATCACAATCAACATTGAT+TGG 0.437113 7.1:-69771636 None:intergenic
TTTCTATAGAGCATATGAAC+TGG 0.444548 7.1:-69774031 None:intergenic
CCAGTTAATGATAGGAGACT+TGG 0.445121 7.1:-69775172 None:intergenic
CTTCTAATACAGATTATATG+AGG 0.451700 7.1:+69769760 MS.gene88080:CDS
ATGATAGGAGACTTGGGAGG+AGG 0.454832 7.1:-69775165 None:intergenic
CGTCCCAAGTAACGGGTTGA+AGG 0.466739 7.1:-69772222 None:intergenic
ACATTGTTTCATAGGTTTCA+AGG 0.467987 7.1:-69773181 None:intergenic
TACTGTAAACAATTTGAGAA+AGG 0.478598 7.1:+69773744 MS.gene88080:CDS
TCTGGTTTCGTCCCAAGTAA+CGG 0.484246 7.1:-69772230 None:intergenic
CCTCCACAATCAACCTCTAA+AGG 0.485817 7.1:-69775231 None:intergenic
CCTATGAAACAATGTTCCCT+AGG 0.501174 7.1:+69773189 MS.gene88080:CDS
GAATAAAAGGGCTCAGATGA+AGG 0.502319 7.1:+69770012 MS.gene88080:CDS
GTAAACAATTTGAGAAAGGA+TGG 0.505133 7.1:+69773748 MS.gene88080:CDS
CTACAAGATGACAGGTAGAA+TGG 0.507649 7.1:-69774151 None:intergenic
TTTAACTGATTATTAGCCCT+AGG 0.509375 7.1:-69773206 None:intergenic
TATCATGAATGCCTCGACTT+TGG 0.512377 7.1:+69773274 MS.gene88080:CDS
ATCTGAGAATATAGCTATGA+GGG 0.523034 7.1:+69771572 MS.gene88080:CDS
ACACTCCTCGTCAGATTCAA+AGG 0.528470 7.1:+69769802 MS.gene88080:CDS
GATCTGAGAATATAGCTATG+AGG 0.531988 7.1:+69771571 MS.gene88080:CDS
AATCCTTTAGAGGTTGATTG+TGG 0.533751 7.1:+69775228 MS.gene88080:CDS
ATTTCCAACTATTGTGACAA+TGG 0.536153 7.1:+69773433 MS.gene88080:CDS
TACTTGGATTGAACATGTTG+AGG 0.543027 7.1:+69773994 MS.gene88080:CDS
TTAACTGATTATTAGCCCTA+GGG 0.545795 7.1:-69773205 None:intergenic
AGTTATATCTTCTCGAACGA+AGG 0.555948 7.1:+69773469 MS.gene88080:CDS
TTCTATAGAGCATATGAACT+GGG 0.555956 7.1:-69774030 None:intergenic
CCTTTAGAGGTTGATTGTGG+AGG 0.558640 7.1:+69775231 MS.gene88080:CDS
TTCATCCAAAACATGCGTAA+TGG 0.559605 7.1:+69773846 MS.gene88080:CDS
ATATCTTCTCGAACGAAGGA+TGG 0.565148 7.1:+69773473 MS.gene88080:CDS
ATACCTTCAACCCGTTACTT+GGG 0.567944 7.1:+69772219 MS.gene88080:CDS
CATGCGTAATGGCTATTCCA+AGG 0.570990 7.1:+69773857 MS.gene88080:CDS
CAATTCAAAGAATGTGTGAA+AGG 0.576894 7.1:+69774101 MS.gene88080:CDS
TGGATGAAATCAAACACTGA+TGG 0.577338 7.1:+69773143 MS.gene88080:CDS
GGCTTCTTCAGGAACTCACA+TGG 0.580192 7.1:+69775252 MS.gene88080:CDS
AGTTGACACTTCTGGTGTTG+TGG 0.581410 7.1:+69775200 MS.gene88080:CDS
TGTTTGGTTTCAGAATAAAA+GGG 0.584709 7.1:+69770000 MS.gene88080:CDS
TCACAATCAACATTGATTGG+TGG 0.587384 7.1:-69771633 None:intergenic
AAAATTCTATTCTGATGAGA+CGG 0.588765 7.1:+69772264 MS.gene88080:CDS
ATCGATCTGTCTAGGAGACA+AGG 0.592207 7.1:-69769978 None:intergenic
AACCAAACATCGATCTGTCT+AGG 0.593076 7.1:-69769986 None:intergenic
AAATACTCAACTCAAAGAAG+AGG 0.593830 7.1:+69771683 MS.gene88080:CDS
CTATGAAACAATGTTCCCTA+GGG 0.595544 7.1:+69773190 MS.gene88080:CDS
CAAATTGTTTACAGTAACGT+AGG 0.603339 7.1:-69773737 None:intergenic
TAAACAATTTGAGAAAGGAT+GGG 0.603561 7.1:+69773749 MS.gene88080:CDS
AAAATCACTGATACGCATGA+AGG 0.608316 7.1:-69774208 None:intergenic
CAGTTAATGATAGGAGACTT+GGG 0.614592 7.1:-69775171 None:intergenic
AATTCTCTAATAGGAACAAG+TGG 0.620684 7.1:-69773708 None:intergenic
AGCATTGTAGCCAGATTCAG+TGG 0.621323 7.1:+69772184 MS.gene88080:CDS
ATGGAGCATCATCACAGTGA+AGG 0.625104 7.1:+69769729 MS.gene88080:CDS
TCACACGACTACAAGATGAC+AGG 0.627587 7.1:-69774159 None:intergenic
ACATAGGTTGCAGTTAAGCA+GGG 0.638853 7.1:+69769949 MS.gene88080:intron
AAACATTTCAACCAAAGTCG+AGG 0.640163 7.1:-69773285 None:intergenic
TCAAGCCTTTGAATCTGACG+AGG 0.643299 7.1:-69769807 None:intergenic
AATGTTATCTGCAGCACTTG+TGG 0.647495 7.1:+69771606 MS.gene88080:CDS
TGGAAACTAATGAGCCTCTG+TGG 0.648672 7.1:+69773123 MS.gene88080:CDS
GGAATGAATGATACGCGCGA+AGG 0.654386 7.1:-69774187 None:intergenic
GAATCTGACGAGGAGTGTGA+CGG 0.662551 7.1:-69769797 None:intergenic
TCGATCTGTCTAGGAGACAA+GGG 0.677971 7.1:-69769977 None:intergenic
GTTATCTGCAGCACTTGTGG+TGG 0.684640 7.1:+69771609 MS.gene88080:CDS
GTGTTTGATTTCATCCACAG+AGG 0.690229 7.1:-69773137 None:intergenic
AGCAACCGGAAGGAAGACGA+TGG 0.719881 7.1:-69773824 None:intergenic
TTAATGATAGGAGACTTGGG+AGG 0.788294 7.1:-69775168 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATAAAATAATAAA+GGG - chr7.1:69769869-69769888 None:intergenic 0.0%
!! TAAAAAAAATAAAATAATAA+AGG - chr7.1:69769870-69769889 None:intergenic 0.0%
!!! ATTATTTTATTTTTTTTATA+TGG + chr7.1:69769872-69769891 MS.gene88080:intron 0.0%
!! AAAAAATTAGTTAAAAATTG+TGG + chr7.1:69771920-69771939 MS.gene88080:intron 10.0%
!! TTTAATATTAAAACAATTAG+TGG - chr7.1:69770366-69770385 None:intergenic 10.0%
!!! TCTTGTATATTTTAATTTAT+AGG + chr7.1:69773970-69773989 MS.gene88080:intron 10.0%
!! AAAAAATTAATCATACCAAT+TGG - chr7.1:69773514-69773533 None:intergenic 15.0%
!! AAAAATAAAATAATAAAGGG+TGG - chr7.1:69769866-69769885 None:intergenic 15.0%
!! AAACAAAAGAAAAATATTTG+AGG + chr7.1:69771292-69771311 MS.gene88080:intron 15.0%
!! AAATGCTTATTAAATTGTAA+TGG + chr7.1:69771089-69771108 MS.gene88080:intron 15.0%
!! AATTCAACAAAATGTATTTA+AGG + chr7.1:69771857-69771876 MS.gene88080:intron 15.0%
!! ACAATAGAATTAAATATGAT+CGG - chr7.1:69774731-69774750 None:intergenic 15.0%
!! CATGTTAATATATTAAGAAA+TGG + chr7.1:69772773-69772792 MS.gene88080:intron 15.0%
!! TTTATAAGAAAAACTATTAC+CGG - chr7.1:69772800-69772819 None:intergenic 15.0%
!!! AAAATCTTGTTTTTTCATAA+TGG - chr7.1:69770226-69770245 None:intergenic 15.0%
!!! AAAATGGATTTTAAGTATAT+AGG + chr7.1:69770447-69770466 MS.gene88080:intron 15.0%
!!! AATATCTTGAATTTTTGTTT+GGG + chr7.1:69774351-69774370 MS.gene88080:intron 15.0%
!!! ATAATTACTTGACTTTTTTT+TGG + chr7.1:69774419-69774438 MS.gene88080:intron 15.0%
!!! ATGATAAAATAAAAGCATTA+TGG - chr7.1:69772487-69772506 None:intergenic 15.0%
!!! ATTTATATGCAGAATTTTAA+TGG + chr7.1:69771772-69771791 MS.gene88080:intron 15.0%
!!! ATTTTAATTTATAGGTTACT+TGG + chr7.1:69773978-69773997 MS.gene88080:intron 15.0%
!!! ATTTTAGATGTATTTTTGTA+TGG + chr7.1:69773560-69773579 MS.gene88080:intron 15.0%
!!! CTATTGTTTTAAGTTTAATT+GGG - chr7.1:69770965-69770984 None:intergenic 15.0%
!!! GTCTTTTTATTTTATTTTTC+AGG + chr7.1:69769894-69769913 MS.gene88080:intron 15.0%
!!! GTTATAAATTTTAGTTGATT+TGG + chr7.1:69770044-69770063 MS.gene88080:intron 15.0%
!!! TAATATCTTGAATTTTTGTT+TGG + chr7.1:69774350-69774369 MS.gene88080:intron 15.0%
!!! TAATTACTTGACTTTTTTTT+GGG + chr7.1:69774420-69774439 MS.gene88080:intron 15.0%
!!! TATTGTTTTAAGTTTAATTG+GGG - chr7.1:69770964-69770983 None:intergenic 15.0%
!!! TCTATTGTTTTAAGTTTAAT+TGG - chr7.1:69770966-69770985 None:intergenic 15.0%
!! AAATACAAAACATGTAAACA+TGG - chr7.1:69772091-69772110 None:intergenic 20.0%
!! AAGTAAAAGTAAGTTTGTAT+GGG + chr7.1:69770307-69770326 MS.gene88080:intron 20.0%
!! AAGTTGAATAAAAAATAGCA+AGG - chr7.1:69772523-69772542 None:intergenic 20.0%
!! AATATAATCTACAATTTGAG+TGG + chr7.1:69774578-69774597 MS.gene88080:intron 20.0%
!! ACCATTATCATATATCATTT+AGG - chr7.1:69774983-69775002 None:intergenic 20.0%
!! ATAATAAGTAAGTACGTATA+AGG - chr7.1:69770771-69770790 None:intergenic 20.0%
!! ATTATCATATATCATTTAGG+AGG - chr7.1:69774980-69774999 None:intergenic 20.0%
!! CGTGTTCAATTATTAAAAAT+GGG + chr7.1:69770200-69770219 MS.gene88080:intron 20.0%
!! CTTATAAAATAATACAAGTG+AGG + chr7.1:69772812-69772831 MS.gene88080:intron 20.0%
!! GACATCTTATAATAGTTTAT+TGG - chr7.1:69771219-69771238 None:intergenic 20.0%
!! TAAGTAAAAGTAAGTTTGTA+TGG + chr7.1:69770306-69770325 MS.gene88080:intron 20.0%
!! TATTATGTGGTAAATTGAAA+TGG + chr7.1:69772126-69772145 MS.gene88080:intron 20.0%
!! TCCTAAATGATATATGATAA+TGG + chr7.1:69774979-69774998 MS.gene88080:intron 20.0%
!! TCTTATTGTTAAATCTAGTT+TGG - chr7.1:69775016-69775035 None:intergenic 20.0%
!! TTATAAGAAAAACTATTACC+GGG - chr7.1:69772799-69772818 None:intergenic 20.0%
!! TTTATATCGTGGTAAAATAT+AGG + chr7.1:69771957-69771976 MS.gene88080:intron 20.0%
!!! ACAATAACTCTTTTGATATA+AGG - chr7.1:69770803-69770822 None:intergenic 20.0%
!!! ACTATAAAATCTCATTTTGT+TGG + chr7.1:69773900-69773919 MS.gene88080:intron 20.0%
!!! ATAGTAGTTTTCTACATTTA+TGG + chr7.1:69771057-69771076 MS.gene88080:intron 20.0%
!!! CCATTTTTAATAATTGAACA+CGG - chr7.1:69770202-69770221 None:intergenic 20.0%
!!! GATTTAATTTGTGTTGTTAA+TGG + chr7.1:69771007-69771026 MS.gene88080:intron 20.0%
!!! TATATTTTACCACGATATAA+AGG - chr7.1:69771958-69771977 None:intergenic 20.0%
!!! TCACTTTGTTTATTACAAAA+TGG + chr7.1:69770431-69770450 MS.gene88080:intron 20.0%
!!! TGTTTACATGTTTTGTATTT+TGG + chr7.1:69772091-69772110 MS.gene88080:intron 20.0%
!!! TTTGTGTTTTGTTAATAGTT+CGG + chr7.1:69772319-69772338 MS.gene88080:intron 20.0%
! AAAAGTTACACTATAGATAG+CGG + chr7.1:69772567-69772586 MS.gene88080:intron 25.0%
! AAAATTCTATTCTGATGAGA+CGG + chr7.1:69772264-69772283 MS.gene88080:CDS 25.0%
! AAAGAATAAGAAGTTCTTAC+AGG - chr7.1:69773317-69773336 None:intergenic 25.0%
! AAATAACTAAGTGTGACTAT+TGG + chr7.1:69774783-69774802 MS.gene88080:intron 25.0%
! AAATCACAATCAACATTGAT+TGG - chr7.1:69771639-69771658 None:intergenic 25.0%
! AATAGTCTAATCATATGTGT+CGG - chr7.1:69770152-69770171 None:intergenic 25.0%
! AGATTGTGAACTAATTTGAT+AGG + chr7.1:69771892-69771911 MS.gene88080:intron 25.0%
! ATAAAATAATACAAGTGAGG+TGG + chr7.1:69772815-69772834 MS.gene88080:intron 25.0%
! ATATAGCATCTAAATGTGTT+AGG - chr7.1:69771271-69771290 None:intergenic 25.0%
! ATTCAATGTGTAAGAGAAAT+TGG - chr7.1:69773632-69773651 None:intergenic 25.0%
! CAATCAATTAGGATTTGAAA+AGG + chr7.1:69774491-69774510 MS.gene88080:intron 25.0%
! CAATTAAAAGTGAATTACCT+TGG - chr7.1:69773877-69773896 None:intergenic 25.0%
! CAATTACATACACAACTATT+AGG - chr7.1:69771115-69771134 None:intergenic 25.0%
! CATAACAAACATTTATTTCG+AGG + chr7.1:69773801-69773820 MS.gene88080:CDS 25.0%
! CATATGATTAGACTATTACA+AGG + chr7.1:69770155-69770174 MS.gene88080:intron 25.0%
! CCGAGTCAATAATTTAATAA+CGG - chr7.1:69772399-69772418 None:intergenic 25.0%
! CCGTGTTCAATTATTAAAAA+TGG + chr7.1:69770199-69770218 MS.gene88080:intron 25.0%
! CGTGAATTACTTAAATAGTT+CGG + chr7.1:69772421-69772440 MS.gene88080:intron 25.0%
! CTTCTAATACAGATTATATG+AGG + chr7.1:69769760-69769779 MS.gene88080:CDS 25.0%
! GATATTGCAAATAATGTTGA+TGG + chr7.1:69774600-69774619 MS.gene88080:intron 25.0%
! GATTTATGAACTCTATTATG+TGG + chr7.1:69772113-69772132 MS.gene88080:intron 25.0%
! GGGAAGTTAATTTATCAAAA+AGG + chr7.1:69772881-69772900 MS.gene88080:intron 25.0%
! TAAACAATTTGAGAAAGGAT+GGG + chr7.1:69773749-69773768 MS.gene88080:CDS 25.0%
! TAATATATTAAGAAATGGCC+CGG + chr7.1:69772778-69772797 MS.gene88080:intron 25.0%
! TACTGTAAACAATTTGAGAA+AGG + chr7.1:69773744-69773763 MS.gene88080:CDS 25.0%
! TAGCATGCATAATTAAACTT+GGG + chr7.1:69770564-69770583 MS.gene88080:intron 25.0%
! TGACAAACTAGTACTAATAT+CGG + chr7.1:69770510-69770529 MS.gene88080:intron 25.0%
! TGGTAAAATGAAATGCATTT+GGG - chr7.1:69771199-69771218 None:intergenic 25.0%
! TTAACAATAAGAAGATCCTA+TGG + chr7.1:69775024-69775043 MS.gene88080:intron 25.0%
! TTGGTAAAATGAAATGCATT+TGG - chr7.1:69771200-69771219 None:intergenic 25.0%
!! ACATAAATATTTTGCGTAAG+TGG - chr7.1:69771732-69771751 None:intergenic 25.0%
!! ACTTTTCAATCTCATATGTA+TGG + chr7.1:69772687-69772706 MS.gene88080:intron 25.0%
!! ATCAGAATAGAATTTTCGTT+TGG - chr7.1:69772260-69772279 None:intergenic 25.0%
!! ATGTTTGGTTTCAGAATAAA+AGG + chr7.1:69769999-69770018 MS.gene88080:CDS 25.0%
!! CATAAATATTTTGCGTAAGT+GGG - chr7.1:69771731-69771750 None:intergenic 25.0%
!! CCGTTATTAAATTATTGACT+CGG + chr7.1:69772396-69772415 MS.gene88080:intron 25.0%
!! TAGTTTGTCACTATTTAGAT+AGG - chr7.1:69770500-69770519 None:intergenic 25.0%
!! TGGTTTTCTTAAATTATTCG+TGG + chr7.1:69771396-69771415 MS.gene88080:intron 25.0%
!! TGTTTGGTTTCAGAATAAAA+GGG + chr7.1:69770000-69770019 MS.gene88080:CDS 25.0%
!!! AAAATAAAAGCATTATGGCT+AGG - chr7.1:69772482-69772501 None:intergenic 25.0%
!!! AAATAAAAGCATTATGGCTA+GGG - chr7.1:69772481-69772500 None:intergenic 25.0%
!!! AGATTTTGATTAATCAACGT+GGG + chr7.1:69772860-69772879 MS.gene88080:intron 25.0%
!!! CATAAAGTTGATATGTAATC+TGG + chr7.1:69772664-69772683 MS.gene88080:intron 25.0%
!!! GTAAACATGGTTTTAAATTG+CGG - chr7.1:69772078-69772097 None:intergenic 25.0%
!!! TGACTTTTTTTTGGGATTTA+GGG + chr7.1:69774428-69774447 MS.gene88080:intron 25.0%
!!! TTGACTTTTTTTTGGGATTT+AGG + chr7.1:69774427-69774446 MS.gene88080:intron 25.0%
!!! TTGGAATTTTGATACATTGA+AGG + chr7.1:69770891-69770910 MS.gene88080:intron 25.0%
!!! TTTTTGGTTACAATGCAAAA+GGG + chr7.1:69772965-69772984 MS.gene88080:intron 25.0%
!!! TTTTTTGGTTACAATGCAAA+AGG + chr7.1:69772964-69772983 MS.gene88080:intron 25.0%
AAATACTCAACTCAAAGAAG+AGG + chr7.1:69771683-69771702 MS.gene88080:CDS 30.0%
AAGAGTTATTGTGAGTGTTA+AGG + chr7.1:69770811-69770830 MS.gene88080:intron 30.0%
AAGGGGTTATTTAAGCTTTA+GGG + chr7.1:69770830-69770849 MS.gene88080:intron 30.0%
AATTCTCTAATAGGAACAAG+TGG - chr7.1:69773711-69773730 None:intergenic 30.0%
ACAATAAGTAAGTCTACTGA+AGG - chr7.1:69770739-69770758 None:intergenic 30.0%
ACATTGTTTCATAGGTTTCA+AGG - chr7.1:69773184-69773203 None:intergenic 30.0%
ACCATTCTTATTCTTCTTCT+GGG + chr7.1:69774319-69774338 MS.gene88080:intron 30.0%
AGAGTTATTGTGAGTGTTAA+GGG + chr7.1:69770812-69770831 MS.gene88080:intron 30.0%
AGCATGCATAATTAAACTTG+GGG + chr7.1:69770565-69770584 MS.gene88080:intron 30.0%
AGGAAGTAGAATTCTCTAAT+AGG - chr7.1:69773720-69773739 None:intergenic 30.0%
ATAATTCAGTATAGTAGTCC+AGG - chr7.1:69771375-69771394 None:intergenic 30.0%
ATCAATAGTGAAGTTGCATT+TGG + chr7.1:69774058-69774077 MS.gene88080:CDS 30.0%
ATCTGAGAATATAGCTATGA+GGG + chr7.1:69771572-69771591 MS.gene88080:CDS 30.0%
ATTATAAGGAAGGTAGATGA+AGG - chr7.1:69774274-69774293 None:intergenic 30.0%
ATTTCCAACTATTGTGACAA+TGG + chr7.1:69773433-69773452 MS.gene88080:CDS 30.0%
CAAATTGTTTACAGTAACGT+AGG - chr7.1:69773740-69773759 None:intergenic 30.0%
CAATGTAAACCTTTATATCG+TGG + chr7.1:69771946-69771965 MS.gene88080:intron 30.0%
CAATTCAAAGAATGTGTGAA+AGG + chr7.1:69774101-69774120 MS.gene88080:CDS 30.0%
CTAGCATGCATAATTAAACT+TGG + chr7.1:69770563-69770582 MS.gene88080:intron 30.0%
GACCATTCAATTTGATCTAA+CGG + chr7.1:69772634-69772653 MS.gene88080:intron 30.0%
GACTACTATACTGAATTATG+TGG + chr7.1:69771376-69771395 MS.gene88080:intron 30.0%
GACTTTGGTTGAAATGTTTA+TGG + chr7.1:69773289-69773308 MS.gene88080:CDS 30.0%
GTAAACAATTTGAGAAAGGA+TGG + chr7.1:69773748-69773767 MS.gene88080:CDS 30.0%
TAAAAGTAAGTTTGTATGGG+AGG + chr7.1:69770310-69770329 MS.gene88080:intron 30.0%
TAACATGCTAGCTATGAATT+TGG - chr7.1:69772760-69772779 None:intergenic 30.0%
TAAGGGGTTATTTAAGCTTT+AGG + chr7.1:69770829-69770848 MS.gene88080:intron 30.0%
TAGTTCGGTTAATTTCAGTT+TGG + chr7.1:69772436-69772455 MS.gene88080:intron 30.0%
TCATATATCATTTAGGAGGT+TGG - chr7.1:69774976-69774995 None:intergenic 30.0%
TGTGGTTAAAAATCCTTTAG+AGG + chr7.1:69775218-69775237 MS.gene88080:CDS 30.0%
TTAACTGATTATTAGCCCTA+GGG - chr7.1:69773208-69773227 None:intergenic 30.0%
TTCTATAGAGCATATGAACT+GGG - chr7.1:69774033-69774052 None:intergenic 30.0%
TTTAACTGATTATTAGCCCT+AGG - chr7.1:69773209-69773228 None:intergenic 30.0%
TTTCTATAGAGCATATGAAC+TGG - chr7.1:69774034-69774053 None:intergenic 30.0%
! GCTGCAGATAACATTTTTAA+GGG - chr7.1:69771601-69771620 None:intergenic 30.0%
! TAAGTGTTAGTCTAATCGAA+CGG - chr7.1:69773541-69773560 None:intergenic 30.0%
! TATGTAACAAGGTTTTTCCT+CGG + chr7.1:69770109-69770128 MS.gene88080:intron 30.0%
! TATTTTACAACGATTCCTTG+TGG + chr7.1:69771473-69771492 MS.gene88080:intron 30.0%
! TGCTGCAGATAACATTTTTA+AGG - chr7.1:69771602-69771621 None:intergenic 30.0%
! TTTTATAATGTGATCGCTTG+TGG + chr7.1:69772046-69772065 MS.gene88080:intron 30.0%
!! AATAAAAGCATTATGGCTAG+GGG - chr7.1:69772480-69772499 None:intergenic 30.0%
!! AGATTGATACTGATTTCCAT+AGG - chr7.1:69775043-69775062 None:intergenic 30.0%
!! GATTGATTTTGTAGAACAAG+TGG + chr7.1:69773402-69773421 MS.gene88080:intron 30.0%
!! GTTTTGTTAATAGTTCGGTT+CGG + chr7.1:69772324-69772343 MS.gene88080:intron 30.0%
!! TGAGAATTGTAGGTTTTGAT+CGG + chr7.1:69774633-69774652 MS.gene88080:intron 30.0%
!! TTGCTATTTCGATACATTGA+GGG - chr7.1:69770638-69770657 None:intergenic 30.0%
!! TTTGCTATTTCGATACATTG+AGG - chr7.1:69770639-69770658 None:intergenic 30.0%
!!! CAGATTTTGATTAATCAACG+TGG + chr7.1:69772859-69772878 MS.gene88080:intron 30.0%
!!! GAATTTTCGTTTGGTTTTTC+TGG - chr7.1:69772251-69772270 None:intergenic 30.0%
!!! GACTATTTTGACTAACAAAG+TGG + chr7.1:69770852-69770871 MS.gene88080:intron 30.0%
!!! GATTTTGATTAATCAACGTG+GGG + chr7.1:69772861-69772880 MS.gene88080:intron 30.0%
AAAATCACTGATACGCATGA+AGG - chr7.1:69774211-69774230 None:intergenic 35.0%
AAACATTTCAACCAAAGTCG+AGG - chr7.1:69773288-69773307 None:intergenic 35.0%
AACAGAAAGCAAACACAAAG+AGG + chr7.1:69773010-69773029 MS.gene88080:intron 35.0%
ACCCAGAAGAAGAATAAGAA+TGG - chr7.1:69774323-69774342 None:intergenic 35.0%
ACCTTCCTTATAATTCGTTC+CGG + chr7.1:69774280-69774299 MS.gene88080:intron 35.0%
ACTAACAAAGTGCACAATCA+GGG - chr7.1:69770667-69770686 None:intergenic 35.0%
ACTAACAAAGTGGACAATCA+GGG + chr7.1:69770862-69770881 MS.gene88080:intron 35.0%
ACTTTCGTCCAGTTAATGAT+AGG - chr7.1:69775183-69775202 None:intergenic 35.0%
AGAAACCGGAACGAATTATA+AGG - chr7.1:69774288-69774307 None:intergenic 35.0%
AGTTATATCTTCTCGAACGA+AGG + chr7.1:69773469-69773488 MS.gene88080:CDS 35.0%
CACCATTCTTATTCTTCTTC+TGG + chr7.1:69774318-69774337 MS.gene88080:intron 35.0%
CACCGTTAGATCAAATTGAA+TGG - chr7.1:69772639-69772658 None:intergenic 35.0%
CAGTTAATGATAGGAGACTT+GGG - chr7.1:69775174-69775193 None:intergenic 35.0%
CATGCAAACACACACATATA+GGG - chr7.1:69774704-69774723 None:intergenic 35.0%
CGGTTAATTTCAGTTTGGTT+CGG + chr7.1:69772441-69772460 MS.gene88080:intron 35.0%
CGTTATAGTGTGAGAATTGT+AGG + chr7.1:69774623-69774642 MS.gene88080:intron 35.0%
CTATGAAACAATGTTCCCTA+GGG + chr7.1:69773190-69773209 MS.gene88080:CDS 35.0%
CTCTCAATGTAAAGTAGTCA+TGG + chr7.1:69774941-69774960 MS.gene88080:intron 35.0%
CTTTACATTGAGAGTCAGAA+TGG - chr7.1:69774935-69774954 None:intergenic 35.0%
GAGTTATTGTGAGTGTTAAG+GGG + chr7.1:69770813-69770832 MS.gene88080:intron 35.0%
GATATTGAACCTCAATACCA+AGG + chr7.1:69771172-69771191 MS.gene88080:intron 35.0%
GATCTGAGAATATAGCTATG+AGG + chr7.1:69771571-69771590 MS.gene88080:CDS 35.0%
GCTAGCTATGAATTTGGATT+TGG - chr7.1:69772754-69772773 None:intergenic 35.0%
GGATCTTATATAACTCACGT+GGG + chr7.1:69770065-69770084 MS.gene88080:intron 35.0%
GTAATTAAACGAAGTGCGTT+CGG + chr7.1:69772908-69772927 MS.gene88080:intron 35.0%
GTGTTCATCTGCAATCAATT+AGG + chr7.1:69774480-69774499 MS.gene88080:intron 35.0%
TAAACCAGAACTGGAAAAGT+GGG + chr7.1:69774521-69774540 MS.gene88080:intron 35.0%
TACTTGGATTGAACATGTTG+AGG + chr7.1:69773994-69774013 MS.gene88080:CDS 35.0%
TCATGCAAACACACACATAT+AGG - chr7.1:69774705-69774724 None:intergenic 35.0%
TCTTAGTGGTTCTTTCCAAT+TGG + chr7.1:69773496-69773515 MS.gene88080:CDS 35.0%
TGGATCTTATATAACTCACG+TGG + chr7.1:69770064-69770083 MS.gene88080:intron 35.0%
TGGATGAAATCAAACACTGA+TGG + chr7.1:69773143-69773162 MS.gene88080:CDS 35.0%
TTAAACCAGAACTGGAAAAG+TGG + chr7.1:69774520-69774539 MS.gene88080:intron 35.0%
TTCATCCAAAACATGCGTAA+TGG + chr7.1:69773846-69773865 MS.gene88080:CDS 35.0%
TTGTTCAAACCAAAACCACA+AGG - chr7.1:69771491-69771510 None:intergenic 35.0%
TTTGCCATTGTCACAATAGT+TGG - chr7.1:69773440-69773459 None:intergenic 35.0%
! AATAGCCATTACGCATGTTT+TGG - chr7.1:69773854-69773873 None:intergenic 35.0%
! AATCCTTTAGAGGTTGATTG+TGG + chr7.1:69775228-69775247 MS.gene88080:CDS 35.0%
! AGGCTCATTAGTTTCCATAT+AGG - chr7.1:69773120-69773139 None:intergenic 35.0%
! GAAAGGCTTGCTTATCTTTA+TGG + chr7.1:69774118-69774137 MS.gene88080:CDS 35.0%
! GAAGCTTTGATGCGAATATT+CGG - chr7.1:69773236-69773255 None:intergenic 35.0%
! GATTTTGTAGAACAAGTGGA+TGG + chr7.1:69773406-69773425 MS.gene88080:intron 35.0%
! GTGTGTGTTTCTATGTAACA+AGG + chr7.1:69770098-69770117 MS.gene88080:intron 35.0%
! TCACAATCAACATTGATTGG+TGG - chr7.1:69771636-69771655 None:intergenic 35.0%
! TTGCATTTGGAGCTGAAAAA+TGG + chr7.1:69774071-69774090 MS.gene88080:CDS 35.0%
!! AGGAGGTTTGCTAATCTTTA+GGG - chr7.1:69775151-69775170 None:intergenic 35.0%
!! AGTTTAAAACGGTTCGGTTA+TGG + chr7.1:69772365-69772384 MS.gene88080:intron 35.0%
!! CAGTTCGGGTTAGTTTAAAA+CGG + chr7.1:69772354-69772373 MS.gene88080:intron 35.0%
!!! AACACGGCCTCTTTTTTTAT+TGG - chr7.1:69770186-69770205 None:intergenic 35.0%
!!! AAGAGCTAGTTTTGCCTATA+TGG + chr7.1:69773103-69773122 MS.gene88080:intron 35.0%
!!! GGCCTCTTTTTTTATTGGAA+CGG - chr7.1:69770181-69770200 None:intergenic 35.0%
AAACCAGAACTGGAAAAGTG+GGG + chr7.1:69774522-69774541 MS.gene88080:intron 40.0%
AACATAGGTTGCAGTTAAGC+AGG + chr7.1:69769948-69769967 MS.gene88080:intron 40.0%
AACCAAACATCGATCTGTCT+AGG - chr7.1:69769989-69770008 None:intergenic 40.0%
AATGTTATCTGCAGCACTTG+TGG + chr7.1:69771606-69771625 MS.gene88080:CDS 40.0%
ACATAGGTTGCAGTTAAGCA+GGG + chr7.1:69769949-69769968 MS.gene88080:intron 40.0%
ACCGGAACGAATTATAAGGA+AGG - chr7.1:69774284-69774303 None:intergenic 40.0%
ACTTGGGGAAATAGTCACTT+TGG + chr7.1:69770580-69770599 MS.gene88080:intron 40.0%
AGAACAACAACCTCGAAGAA+AGG - chr7.1:69774241-69774260 None:intergenic 40.0%
ATACCTTCAACCCGTTACTT+GGG + chr7.1:69772219-69772238 MS.gene88080:CDS 40.0%
ATATCTTCTCGAACGAAGGA+TGG + chr7.1:69773473-69773492 MS.gene88080:CDS 40.0%
ATCTCGAACAATGCTCTTTC+TGG + chr7.1:69775067-69775086 MS.gene88080:intron 40.0%
ATGAAATGCATTTGGGTCCT+TGG - chr7.1:69771192-69771211 None:intergenic 40.0%
ATGCATCAGCTAGTCATACA+TGG + chr7.1:69774827-69774846 MS.gene88080:intron 40.0%
CACATCCTTGTGAACAACAT+AGG + chr7.1:69769933-69769952 MS.gene88080:intron 40.0%
CCAAGTCTCCTATCATTAAC+TGG + chr7.1:69775172-69775191 MS.gene88080:CDS 40.0%
CCAGTTAATGATAGGAGACT+TGG - chr7.1:69775175-69775194 None:intergenic 40.0%
CCTAGGGAACATTGTTTCAT+AGG - chr7.1:69773192-69773211 None:intergenic 40.0%
CCTATGAAACAATGTTCCCT+AGG + chr7.1:69773189-69773208 MS.gene88080:CDS 40.0%
CTACAAGATGACAGGTAGAA+TGG - chr7.1:69774154-69774173 None:intergenic 40.0%
GAACAACAACCTCGAAGAAA+GGG - chr7.1:69774240-69774259 None:intergenic 40.0%
GAATAAAAGGGCTCAGATGA+AGG + chr7.1:69770012-69770031 MS.gene88080:CDS 40.0%
GACTAACAAAGTGCACAATC+AGG - chr7.1:69770668-69770687 None:intergenic 40.0%
GACTAACAAAGTGGACAATC+AGG + chr7.1:69770861-69770880 MS.gene88080:intron 40.0%
GCAATGTCAAACATGAGTGA+TGG - chr7.1:69773069-69773088 None:intergenic 40.0%
GGCCGTTCCAATAAAAAAAG+AGG + chr7.1:69770176-69770195 MS.gene88080:intron 40.0%
TATCATGAATGCCTCGACTT+TGG + chr7.1:69773274-69773293 MS.gene88080:CDS 40.0%
TATTGATCTGCCACTGAATC+TGG - chr7.1:69772197-69772216 None:intergenic 40.0%
TCTTATATAACTCACGTGGG+TGG + chr7.1:69770068-69770087 MS.gene88080:intron 40.0%
TGCAACCTATGTTGTTCACA+AGG - chr7.1:69769941-69769960 None:intergenic 40.0%
TGGTTACAATGCAAAAGGGA+AGG + chr7.1:69772969-69772988 MS.gene88080:intron 40.0%
TTAATGATAGGAGACTTGGG+AGG - chr7.1:69775171-69775190 None:intergenic 40.0%
! ACAACGATTCCTTGTGGTTT+TGG + chr7.1:69771479-69771498 MS.gene88080:intron 40.0%
! ACAAGGTTTTTCCTCGGATT+AGG + chr7.1:69770115-69770134 MS.gene88080:intron 40.0%
! CTAATCATATGTGTCGGTGT+CGG - chr7.1:69770146-69770165 None:intergenic 40.0%
! GACTACTTGCTACACATTCA+GGG + chr7.1:69770922-69770941 MS.gene88080:intron 40.0%
! GTCTTGATCTAGAACAAGTG+TGG + chr7.1:69774749-69774768 MS.gene88080:intron 40.0%
! GTGTTTGATTTCATCCACAG+AGG - chr7.1:69773140-69773159 None:intergenic 40.0%
! TGACTACTTGCTACACATTC+AGG + chr7.1:69770921-69770940 MS.gene88080:intron 40.0%
! TGGACAATCAGGGACTATTT+TGG + chr7.1:69770872-69770891 MS.gene88080:intron 40.0%
! TTTTCTTCTCCCTTTCTTCG+AGG + chr7.1:69774228-69774247 MS.gene88080:intron 40.0%
!! AAGAGTACTAGACAGCCTAA+TGG + chr7.1:69774886-69774905 MS.gene88080:intron 40.0%
!! CATGTTTTGGATGAAGCAAC+CGG - chr7.1:69773841-69773860 None:intergenic 40.0%
!! CGGGTTAGTTTAAAACGGTT+CGG + chr7.1:69772359-69772378 MS.gene88080:intron 40.0%
!! GAGGAGGTTTGCTAATCTTT+AGG - chr7.1:69775152-69775171 None:intergenic 40.0%
!! TACACTATAGATAGCGGACA+TGG + chr7.1:69772573-69772592 MS.gene88080:intron 40.0%
AACCAGAACTGGAAAAGTGG+GGG + chr7.1:69774523-69774542 MS.gene88080:intron 45.0%
ACACTCCTCGTCAGATTCAA+AGG + chr7.1:69769802-69769821 MS.gene88080:CDS 45.0%
AGCATTGTAGCCAGATTCAG+TGG + chr7.1:69772184-69772203 MS.gene88080:CDS 45.0%
AGGGAAGGAAAAGCAGCAAA+AGG + chr7.1:69772984-69773003 MS.gene88080:intron 45.0%
ATCGATCTGTCTAGGAGACA+AGG - chr7.1:69769981-69770000 None:intergenic 45.0%
CATACCTTCAACCCGTTACT+TGG + chr7.1:69772218-69772237 MS.gene88080:CDS 45.0%
CATGCGTAATGGCTATTCCA+AGG + chr7.1:69773857-69773876 MS.gene88080:CDS 45.0%
CATTTGGGTCCTTGGTATTG+AGG - chr7.1:69771184-69771203 None:intergenic 45.0%
CCTCCACAATCAACCTCTAA+AGG - chr7.1:69775234-69775253 None:intergenic 45.0%
CTCCTAGACAGATCGATGTT+TGG + chr7.1:69769984-69770003 MS.gene88080:CDS 45.0%
GACTACTCGTCACTCATTCA+AGG - chr7.1:69770607-69770626 None:intergenic 45.0%
GGCGCAAATTAAACCAGAAC+TGG + chr7.1:69774512-69774531 MS.gene88080:intron 45.0%
GGTGAGAGAGACATAGAAAC+CGG - chr7.1:69774302-69774321 None:intergenic 45.0%
TACTAGACAGCCTAATGGTG+TGG + chr7.1:69774891-69774910 MS.gene88080:intron 45.0%
TCAAGCCTTTGAATCTGACG+AGG - chr7.1:69769810-69769829 None:intergenic 45.0%
TCACACGACTACAAGATGAC+AGG - chr7.1:69774162-69774181 None:intergenic 45.0%
TCGATCTGTCTAGGAGACAA+GGG - chr7.1:69769980-69769999 None:intergenic 45.0%
TGGAAACTAATGAGCCTCTG+TGG + chr7.1:69773123-69773142 MS.gene88080:CDS 45.0%
TGGACGAAAGTTGACACTTC+TGG + chr7.1:69775192-69775211 MS.gene88080:CDS 45.0%
TTGATTGTGGAGGCTTCTTC+AGG + chr7.1:69775241-69775260 MS.gene88080:CDS 45.0%
! AAAGCATTATGGCTAGGGGT+GGG - chr7.1:69772476-69772495 None:intergenic 45.0%
! AGTTGACACTTCTGGTGTTG+TGG + chr7.1:69775200-69775219 MS.gene88080:CDS 45.0%
! ATGGAGCATCATCACAGTGA+AGG + chr7.1:69769729-69769748 MS.gene88080:CDS 45.0%
! CCTTTAGAGGTTGATTGTGG+AGG + chr7.1:69775231-69775250 MS.gene88080:CDS 45.0%
! GGTTCGGTTCAAAACAGTTC+GGG + chr7.1:69772340-69772359 MS.gene88080:intron 45.0%
! TCTGGTTTCGTCCCAAGTAA+CGG - chr7.1:69772233-69772252 None:intergenic 45.0%
! TTTTGGATGAAGCAACCGGA+AGG - chr7.1:69773837-69773856 None:intergenic 45.0%
!! AAAAGCATTATGGCTAGGGG+TGG - chr7.1:69772477-69772496 None:intergenic 45.0%
!! CGGTTCGGTTCAAAACAGTT+CGG + chr7.1:69772339-69772358 MS.gene88080:intron 45.0%
!! TCAAACATGAGTGATGGACG+CGG - chr7.1:69773063-69773082 None:intergenic 45.0%
!! AAAAAATACTAAATATTTAA+AGG + chr7.1:69770985-69771004 MS.gene88080:intron 5.0%
!!! AGTTTTTTTTTTTTTTTTTT+TGG + chr7.1:69772949-69772968 MS.gene88080:intron 5.0%
ACTTCATCTAGATGCCGCCA+CGG - chr7.1:69772300-69772319 None:intergenic 50.0%
AGCAAGCGCAAAGTGAGCTA+CGG - chr7.1:69771342-69771361 None:intergenic 50.0%
ATGATAGGAGACTTGGGAGG+AGG - chr7.1:69775168-69775187 None:intergenic 50.0%
CTGGTTTCGTCCCAAGTAAC+GGG - chr7.1:69772232-69772251 None:intergenic 50.0%
GCAAGACGCTGTAACAGATC+AGG + chr7.1:69772612-69772631 MS.gene88080:intron 50.0%
GCGCATATCACCACACCATT+AGG - chr7.1:69774904-69774923 None:intergenic 50.0%
GGAATGAATGATACGCGCGA+AGG - chr7.1:69774190-69774209 None:intergenic 50.0%
GGCTTCTTCAGGAACTCACA+TGG + chr7.1:69775252-69775271 MS.gene88080:CDS 50.0%
GTTATCTGCAGCACTTGTGG+TGG + chr7.1:69771609-69771628 MS.gene88080:CDS 50.0%
TCAGTATAGTAGTCCAGGCC+CGG - chr7.1:69771370-69771389 None:intergenic 50.0%
TTGAGGCTCCTATGATTGCG+AGG + chr7.1:69771309-69771328 MS.gene88080:intron 50.0%
! AGCTCACTTTGCGCTTGCTA+AGG + chr7.1:69771343-69771362 MS.gene88080:intron 50.0%
! CAGCGTCTTGCTGTAACATC+AGG - chr7.1:69772603-69772622 None:intergenic 50.0%
! CGAACGAAGGATGGTCTTAG+TGG + chr7.1:69773482-69773501 MS.gene88080:CDS 50.0%
! GAATCTGACGAGGAGTGTGA+CGG - chr7.1:69769800-69769819 None:intergenic 50.0%
! GCTCACTTTGCGCTTGCTAA+GGG + chr7.1:69771344-69771363 MS.gene88080:intron 50.0%
!! ATCCCCCACTTTTCCAGTTC+TGG - chr7.1:69774528-69774547 None:intergenic 50.0%
AGCAACCGGAAGGAAGACGA+TGG - chr7.1:69773827-69773846 None:intergenic 55.0%
! ACTTTGCGCTTGCTAAGGGC+CGG + chr7.1:69771348-69771367 MS.gene88080:intron 55.0%
!! CGTCCCAAGTAACGGGTTGA+AGG - chr7.1:69772225-69772244 None:intergenic 55.0%
CGAGGCCATCGTCTTCCTTC+CGG + chr7.1:69773819-69773838 MS.gene88080:CDS 60.0%
CGCAAAGTGAGCTACGGTGC+CGG - chr7.1:69771336-69771355 None:intergenic 60.0%
GCAAAGTGAGCTACGGTGCC+GGG - chr7.1:69771335-69771354 None:intergenic 60.0%
GCTCCTATGATTGCGAGGCC+CGG + chr7.1:69771314-69771333 MS.gene88080:intron 60.0%
TGTCGGACACGCCTAATCCG+AGG - chr7.1:69770129-69770148 None:intergenic 60.0%
! CTTTGCGCTTGCTAAGGGCC+GGG + chr7.1:69771349-69771368 MS.gene88080:intron 60.0%
!! ACATGAGTGATGGACGCGGC+TGG - chr7.1:69773059-69773078 None:intergenic 60.0%
!! CATGAGTGATGGACGCGGCT+GGG - chr7.1:69773058-69773077 None:intergenic 60.0%
GTGCCGGGCCTCGCAATCAT+AGG - chr7.1:69771320-69771339 None:intergenic 65.0%
! ACGGCAAGAGCACACCGTGG+CGG + chr7.1:69772283-69772302 MS.gene88080:intron 65.0%
! GAGACGGCAAGAGCACACCG+TGG + chr7.1:69772280-69772299 MS.gene88080:intron 65.0%
! CGCTTGCTAAGGGCCGGGCC+TGG + chr7.1:69771354-69771373 MS.gene88080:intron 75.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 69769729 69775290 69769729 ID=MS.gene88080
chr7.1 mRNA 69769729 69775290 69769729 ID=MS.gene88080.t1;Parent=MS.gene88080
chr7.1 exon 69769729 69769832 69769729 ID=MS.gene88080.t1.exon1;Parent=MS.gene88080.t1
chr7.1 CDS 69769729 69769832 69769729 ID=cds.MS.gene88080.t1;Parent=MS.gene88080.t1
chr7.1 exon 69769955 69770033 69769955 ID=MS.gene88080.t1.exon2;Parent=MS.gene88080.t1
chr7.1 CDS 69769955 69770033 69769955 ID=cds.MS.gene88080.t1;Parent=MS.gene88080.t1
chr7.1 exon 69771516 69771704 69771516 ID=MS.gene88080.t1.exon3;Parent=MS.gene88080.t1
chr7.1 CDS 69771516 69771704 69771516 ID=cds.MS.gene88080.t1;Parent=MS.gene88080.t1
chr7.1 exon 69772169 69772298 69772169 ID=MS.gene88080.t1.exon4;Parent=MS.gene88080.t1
chr7.1 CDS 69772169 69772298 69772169 ID=cds.MS.gene88080.t1;Parent=MS.gene88080.t1
chr7.1 exon 69773108 69773316 69773108 ID=MS.gene88080.t1.exon5;Parent=MS.gene88080.t1
chr7.1 CDS 69773108 69773316 69773108 ID=cds.MS.gene88080.t1;Parent=MS.gene88080.t1
chr7.1 exon 69773416 69773517 69773416 ID=MS.gene88080.t1.exon6;Parent=MS.gene88080.t1
chr7.1 CDS 69773416 69773517 69773416 ID=cds.MS.gene88080.t1;Parent=MS.gene88080.t1
chr7.1 exon 69773681 69773878 69773681 ID=MS.gene88080.t1.exon7;Parent=MS.gene88080.t1
chr7.1 CDS 69773681 69773878 69773681 ID=cds.MS.gene88080.t1;Parent=MS.gene88080.t1
chr7.1 exon 69773992 69774222 69773992 ID=MS.gene88080.t1.exon8;Parent=MS.gene88080.t1
chr7.1 CDS 69773992 69774222 69773992 ID=cds.MS.gene88080.t1;Parent=MS.gene88080.t1
chr7.1 exon 69775147 69775290 69775147 ID=MS.gene88080.t1.exon9;Parent=MS.gene88080.t1
chr7.1 CDS 69775147 69775290 69775147 ID=cds.MS.gene88080.t1;Parent=MS.gene88080.t1
Gene Sequence

>MS.gene88080

ATGGAGCATCATCACAGTGAAGGAAGTGTTTCTTCTAATACAGATTATATGAGGATGAAACGTTACAACCGTCACACTCCTCGTCAGATTCAAAGGCTTGAAGCGTAAGACTCTTCAGATCTTTTCTCTTTGCACCACCCTTTATTATTTTATTTTTTTTATATGGTCTTTTTATTTTATTTTTCAGGCTGTTTAAAGATTGTTCACATCCTTGTGAACAACATAGGTTGCAGTTAAGCAGGGAATTACCCTTGTCTCCTAGACAGATCGATGTTTGGTTTCAGAATAAAAGGGCTCAGATGAAGGTATTTATGTGTTATAAATTTTAGTTGATTTGGATCTTATATAACTCACGTGGGTGGAGACTTTGTGTGTGTTTCTATGTAACAAGGTTTTTCCTCGGATTAGGCGTGTCCGACACCGACACATATGATTAGACTATTACAAGGCCGTTCCAATAAAAAAAGAGGCCGTGTTCAATTATTAAAAATGGGCCATTATGAAAAAACAAGATTTTTTTAAGCAATAGATGATTATTGTTTAAGTTGTAAATAACATAAAAAATAGTTATTCTTATTAAGTAAAAGTAAGTTTGTATGGGAGGTATTAACTAACTTGTGTTGAACTTCACTAACCACTAATTGTTTTAATATTAAAAATTGTGTTTGTAATAAAAAGAAACGTCAAAAACTTAAAAAATCATCACTTTGTTTATTACAAAATGGATTTTAAGTATATAGGTTGTTGTTGCTTAAGAAAAGTGTCTTTCCTATCTAAATAGTGACAAACTAGTACTAATATCGGAAAAGAAAAAAAAAACAATAGCAAATAGTACTAGCATGCATAATTAAACTTGGGGAAATAGTCACTTTGGTCCTTGAATGAGTGACGAGTAGTCACAATAGTCCCTCAATGTATCGAAATAGCAAAATAGTCCCTGATTGTGCACTTTGTTAGTCAAAATAGTTCTTGATATTAAAATATTTCATTAATATTGTCATATTAGTCCTTCAGTAGACTTACTTATTGTCATATTAGTCCTTATACGTACTTACTTATTATCATTATAGTCCTTATATCAAAAGAGTTATTGTGAGTGTTAAGGGGTTATTTAAGCTTTAGGGACTATTTTGACTAACAAAGTGGACAATCAGGGACTATTTTGGAATTTTGATACATTGAAGGATTATTGTGACTACTTGCTACACATTCAGGGATCAAAGTGACTATTACCCCAATTAAACTTAAAACAATAGAAAAAATACTAAATATTTAAAGGATTTAATTTGTGTTGTTAATGGAAATATATGACAAAAAATTTAAGATATATAGTAGTTTTCTACATTTATGGAAAATTCTGAAATGCTTATTAAATTGTAATGGCCTAATAGTTGTGTATGTAATTGAGACTTTTATATTTATTTCAAATTCATACAAATGCTCGATATTGAACCTCAATACCAAGGACCCAAATGCATTTCATTTTACCAATAAACTATTATAAGATGTCTATTGAATTTTTATATTTTATTATATACACCTAACACATTTAGATGCTATATTAAACAAAAGAAAAATATTTGAGGCTCCTATGATTGCGAGGCCCGGCACCGTAGCTCACTTTGCGCTTGCTAAGGGCCGGGCCTGGACTACTATACTGAATTATGTGGTTTTCTTAAATTATTCGTGGTGTCTGTGTACTGTGCTTCATAGATGTGTTTTATACATGAGATTATTTATCTGTTATTTTACAACGATTCCTTGTGGTTTTGGTTTGAACAAAACAGACACGAGAAGAGAAAGATGATAACTCTAAACTCATAGAAGAGAATGATAAAATAAGATCTGAGAATATAGCTATGAGGGAAGCCCTTAAAAATGTTATCTGCAGCACTTGTGGTGGTCCACCAATCAATGTTGATTGTGATTTTGATGAACAAAAGTTGAGAATCGAAAATACTCAACTCAAAGAAGAGGTACGTAAATCATTAATCAAATACCCACTTACGCAAAATATTTATGTGTTTATTCATTCTTATTCTTATTTATATGCAGAATTTTAATGGTTAAATATGTTTTTAAATCTTATAATATTACAAAGTCTCTATAAAAGCAAAATAAAGACTAAAATTCAACAAAATGTATTTAAGGAACTAACTTCAAAGATTGTGAACTAATTTGATAGGTCTAAAAAAAATTAGTTAAAAATTGTGGTTACAATGTAAACCTTTATATCGTGGTAAAATATAGGAAAATGTGATTGATGTTGTTGAAATTGTAGTTGCATTGTTGTTGCATAGATCTCAACTTAAAATTATTTTATAATGTGATCGCTTGTGGTGCAGACCGCAATTTAAAACCATGTTTACATGTTTTGTATTTTGGATTTATGAACTCTATTATGTGGTAAATTGAAATGGTGATTTTTGAACTTTTGTAGCTTCTTAGAGTGTCTAGCATTGTAGCCAGATTCAGTGGCAGATCAATATCATACCTTCAACCCGTTACTTGGGACGAAACCAGAAAAACCAAACGAAAATTCTATTCTGATGAGACGGCAAGAGCACACCGTGGCGGCATCTAGATGAAGTTTGTGTTTTGTTAATAGTTCGGTTCGGTTCAAAACAGTTCGGGTTAGTTTAAAACGGTTCGGTTATGGTTCAATAACCGTTATTAAATTATTGACTCGGTTCGTGAATTACTTAAATAGTTCGGTTAATTTCAGTTTGGTTCGGTTCTTTTTGCCCACCCCTAGCCATAATGCTTTTATTTTATCATATAAGTTCTTTTTCCTTGCTATTTTTTATTCAACTTAATTATTTTTTTATGTACTTTTTAAAAAGTTACACTATAGATAGCGGACATGGATTTCCTGATGTTACAGCAAGACGCTGTAACAGATCAGGACCATTCAATTTGATCTAACGGTGAAGCTCATAAAGTTGATATGTAATCTGGACTTTTCAATCTCATATGTATGGTTGTGATTGATTAGTGTTATACTGTGTGCTTTTTTACAGCACCAAATCCAAATTCATAGCTAGCATGTTAATATATTAAGAAATGGCCCGGTAATAGTTTTTCTTATAAAATAATACAAGTGAGGTGGAACAAAATATTTATTTGTACGCAGATTTTGATTAATCAACGTGGGGAAGTTAATTTATCAAAAAGGTATAGTAATTAAACGAAGTGCGTTCGGAACAAAAATATTTACACTAGTTTTTTTTTTTTTTTTTTTGGTTACAATGCAAAAGGGAAGGAAAAGCAGCAAAAGGAAAAACAGAAAGCAAACACAAAGAGGACTATTCTCTAGAAAAGAAAGTCCCAGCCGCGTCCATCACTCATGTTTGACATTGCTACAAATGCAATGCAAGAGCTAGTTTTGCCTATATGGAAACTAATGAGCCTCTGTGGATGAAATCAAACACTGATGGAAGAGATACTCTAAACCTTGAAACCTATGAAACAATGTTCCCTAGGGCTAATAATCAGTTAAAGAATCCGAATATTCGCATCAAAGCTTCTAGAAATTCTGTTGATGTTATCATGAATGCCTCGACTTTGGTTGAAATGTTTATGGATCCTGTAAGAACTTCTTATTCTTTTATAGTGTTTTCTTAGATTTGAATTCACTAATTCAATTTAGTTAACTTAATTAAGCAAATTTAATGATTGATTTTGTAGAACAAGTGGATGGAGTTATTTCCAACTATTGTGACAATGGCAAAGACTATTGAAGTTATATCTTCTCGAACGAAGGATGGTCTTAGTGGTTCTTTCCAATTGGTATGATTAATTTTTTTTCACCGTTCGATTAGACTAACACTTATTTTAGATGTATTTTTGTATGGTGTTTCTATACGATGTCGCTTAGATTCTAATTTTTCAACATGCATGCCAATTTCTCTTACACATTGAATTACTTTTCATTCAATATTTATTTTTTTAGATGTATGAAGAGTTGCAAGTGCTTTCACCACTTGTTCCTATTAGAGAATTCTACTTCCTACGTTACTGTAAACAATTTGAGAAAGGATGGGCAATAGTTGATGTTTCATATGAATTTCGTCATAACAAACATTTATTTCGAGGCCATCGTCTTCCTTCCGGTTGCTTCATCCAAAACATGCGTAATGGCTATTCCAAGGTAATTCACTTTTAATTGAACACTATAAAATCTCATTTTGTTGGACACAATTTATTATTACATTAATATATATGAAGCATTTTTGAGTCACTCTTGTATATTTTAATTTATAGGTTACTTGGATTGAACATGTTGAGGTTCAAGACAGAAACCCAGTTCATATGCTCTATAGAAATGTTATCAATAGTGAAGTTGCATTTGGAGCTGAAAAATGGCTCACTACAATTCAAAGAATGTGTGAAAGGCTTGCTTATCTTTATGGATTCATCAAGCCATTCTACCTGTCATCTTGTAGTCGTGTGACTATTCCTTCGCGCGTATCATTCATTCCTTCATGCGTATCAGTGATTTTTCTTCTCCCTTTCTTCGAGGTTGTTGTTCTAGTGTTCATTCCTTCATCTACCTTCCTTATAATTCGTTCCGGTTTCTATGTCTCTCTCACCATTCTTATTCTTCTTCTGGGTTGCAATCTAATATCTTGAATTTTTGTTTGGGATTTTGTGTTGAAATTTTTTTATGTCAATTTCAATCTAATTTCTTATAATTACTTGACTTTTTTTTGGGATTTAGGGTTTGAAAAAAATTTCTATTTCAATATGTTGTGTTCATCTGCAATCAATTAGGATTTGAAAAGGCGCAAATTAAACCAGAACTGGAAAAGTGGGGGATTTATACTATAATAATGTTTAAATCTAAATAAATATAATCTACAATTTGAGTGGATATTGCAAATAATGTTGATGGCGTTATAGTGTGAGAATTGTAGGTTTTGATCGGAATTCTTATCATTCTCACATATAACTACGATTCTCATATGACATGCCCTATATGTGTGTGTTTGCATGAATGCCGATCATATTTAATTCTATTGTCTTGATCTAGAACAAGTGTGGTTATCAGACAAAAATAACTAAGTGTGACTATTGGAATTTTTCTGTGAAAGTATAAATGCATCAGCTAGTCATACATGGACTGCAATATCAACTTTGAATGAGATTATTGTGAGAAAGAGTACTAGACAGCCTAATGGTGTGGTGATATGCGCAGCTACTACCATTCTGACTCTCAATGTAAAGTAGTCATGGCTTGCTTAACCAACCTCCTAAATGATATATGATAATGGTATACAAGAAACCAAACTAGATTTAACAATAAGAAGATCCTATGGAAATCAGTATCAATCTCATAATCTCGAACAATGCTCTTTCTGGAAACGAAACAAAACAAAAACTGCTGCTGTGAATATGACATAATTTGTTATTCTAAAGTCCCTAAAGATTAGCAAACCTCCTCCCAAGTCTCCTATCATTAACTGGACGAAAGTTGACACTTCTGGTGTTGTGGTTAAAAATCCTTTAGAGGTTGATTGTGGAGGCTTCTTCAGGAACTCACATGGCTTGCTCAGAATGTGA
Protein sequence

>MS.gene88080.t1

MEHHHSEGSVSSNTDYMRMKRYNRHTPRQIQRLEALQLSRELPLSPRQIDVWFQNKRAQMKTREEKDDNSKLIEENDKIRSENIAMREALKNVICSTCGGPPINVDCDFDEQKLRIENTQLKEELLRVSSIVARFSGRSISYLQPVTWDETRKTKRKFYSDETARAHPSFAYMETNEPLWMKSNTDGRDTLNLETYETMFPRANNQLKNPNIRIKASRNSVDVIMNASTLVEMFMDPNKWMELFPTIVTMAKTIEVISSRTKDGLSGSFQLMYEELQVLSPLVPIREFYFLRYCKQFEKGWAIVDVSYEFRHNKHLFRGHRLPSGCFIQNMRNGYSKVTWIEHVEVQDRNPVHMLYRNVINSEVAFGAEKWLTTIQRMCERLAYLYGFIKPFYLSSCSRVTIPSRVSFIPSCVSSLKISKPPPKSPIINWTKVDTSGVVVKNPLEVDCGGFFRNSHGLLRM