Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88151.t1 | XP_003605474.1 | 72.1 | 229 | 57 | 2 | 1 | 222 | 1 | 229 | 1.70E-81 | 312.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88151.t1 | Q9FJK3 | 55.8 | 154 | 67 | 1 | 1 | 154 | 1 | 153 | 9.0e-39 | 161.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88151.t1 | G7JM29 | 72.1 | 229 | 57 | 2 | 1 | 222 | 1 | 229 | 1.2e-81 | 312.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene88151.t1 | TF | MADS-M-type |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88151.t1 | MTR_4g031910 | 72.650 | 234 | 47 | 2 | 1 | 222 | 1 | 229 | 3.29e-114 | 326 |
MS.gene88151.t1 | MTR_4g032290 | 69.672 | 244 | 39 | 2 | 1 | 222 | 1 | 231 | 7.05e-111 | 317 |
MS.gene88151.t1 | MTR_4g032620 | 57.576 | 231 | 89 | 1 | 1 | 222 | 1 | 231 | 4.39e-93 | 272 |
MS.gene88151.t1 | MTR_8g036130 | 56.680 | 247 | 82 | 4 | 1 | 222 | 1 | 247 | 3.95e-89 | 263 |
MS.gene88151.t1 | MTR_4g032260 | 80.892 | 157 | 30 | 0 | 1 | 157 | 1 | 157 | 2.30e-82 | 243 |
MS.gene88151.t1 | MTR_3g065100 | 49.793 | 241 | 96 | 4 | 1 | 219 | 1 | 238 | 1.80e-66 | 205 |
MS.gene88151.t1 | MTR_3g466980 | 45.690 | 232 | 101 | 5 | 1 | 218 | 1 | 221 | 4.59e-64 | 198 |
MS.gene88151.t1 | MTR_2g035610 | 72.131 | 122 | 34 | 0 | 1 | 122 | 1 | 122 | 1.71e-50 | 160 |
MS.gene88151.t1 | MTR_3g466830 | 49.669 | 151 | 75 | 1 | 3 | 153 | 2 | 151 | 4.33e-47 | 153 |
MS.gene88151.t1 | MTR_4g032270 | 56.204 | 137 | 45 | 2 | 94 | 222 | 2 | 131 | 7.63e-46 | 149 |
MS.gene88151.t1 | MTR_5g075380 | 47.097 | 155 | 81 | 1 | 1 | 155 | 1 | 154 | 4.97e-45 | 148 |
MS.gene88151.t1 | MTR_4g063790 | 44.805 | 154 | 85 | 0 | 1 | 154 | 1 | 154 | 1.24e-44 | 147 |
MS.gene88151.t1 | MTR_3g031100 | 35.268 | 224 | 133 | 4 | 1 | 219 | 1 | 217 | 1.97e-42 | 144 |
MS.gene88151.t1 | MTR_3g467080 | 42.949 | 156 | 89 | 0 | 1 | 156 | 1 | 156 | 2.07e-42 | 141 |
MS.gene88151.t1 | MTR_3g466890 | 46.053 | 152 | 81 | 1 | 3 | 154 | 2 | 152 | 3.33e-41 | 138 |
MS.gene88151.t1 | MTR_5g047580 | 46.154 | 156 | 82 | 2 | 1 | 156 | 1 | 154 | 6.82e-41 | 137 |
MS.gene88151.t1 | MTR_2g016210 | 39.560 | 182 | 108 | 2 | 1 | 180 | 1 | 182 | 3.65e-40 | 138 |
MS.gene88151.t1 | MTR_1g077390 | 42.308 | 156 | 88 | 2 | 1 | 156 | 1 | 154 | 5.29e-37 | 127 |
MS.gene88151.t1 | MTR_1g090783 | 42.208 | 154 | 87 | 2 | 3 | 156 | 2 | 153 | 3.33e-35 | 122 |
MS.gene88151.t1 | MTR_1g077320 | 44.231 | 156 | 85 | 2 | 1 | 156 | 1 | 154 | 2.39e-34 | 120 |
MS.gene88151.t1 | MTR_3g465410 | 43.651 | 126 | 71 | 0 | 29 | 154 | 1 | 126 | 5.46e-34 | 119 |
MS.gene88151.t1 | MTR_7g011950 | 43.590 | 156 | 86 | 2 | 1 | 156 | 1 | 154 | 7.76e-34 | 119 |
MS.gene88151.t1 | MTR_4g028720 | 44.231 | 156 | 85 | 2 | 1 | 156 | 1 | 154 | 1.09e-33 | 119 |
MS.gene88151.t1 | MTR_1g084950 | 44.872 | 156 | 84 | 2 | 1 | 156 | 1 | 154 | 2.14e-33 | 118 |
MS.gene88151.t1 | MTR_1g090710 | 38.961 | 154 | 93 | 1 | 1 | 154 | 1 | 153 | 6.53e-33 | 116 |
MS.gene88151.t1 | MTR_1g090697 | 40.000 | 150 | 88 | 2 | 1 | 150 | 1 | 148 | 5.96e-32 | 114 |
MS.gene88151.t1 | MTR_1g077300 | 43.590 | 156 | 84 | 2 | 1 | 156 | 1 | 152 | 7.52e-32 | 114 |
MS.gene88151.t1 | MTR_4g028800 | 77.143 | 70 | 14 | 1 | 1 | 70 | 1 | 68 | 2.98e-31 | 109 |
MS.gene88151.t1 | MTR_3g031240 | 34.615 | 156 | 102 | 0 | 1 | 156 | 1 | 156 | 1.23e-30 | 111 |
MS.gene88151.t1 | MTR_3g466900 | 41.463 | 123 | 71 | 1 | 32 | 154 | 2 | 123 | 5.13e-29 | 105 |
MS.gene88151.t1 | MTR_7g055800 | 49.573 | 117 | 31 | 2 | 1 | 117 | 1 | 89 | 3.65e-28 | 102 |
MS.gene88151.t1 | MTR_2g035580 | 37.580 | 157 | 97 | 1 | 1 | 157 | 1 | 156 | 3.27e-26 | 99.8 |
MS.gene88151.t1 | MTR_3g466930 | 39.024 | 123 | 74 | 1 | 32 | 154 | 2 | 123 | 5.98e-26 | 98.2 |
MS.gene88151.t1 | MTR_7g055790 | 51.351 | 111 | 36 | 1 | 1 | 111 | 59 | 151 | 3.35e-25 | 96.7 |
MS.gene88151.t1 | MTR_7g106510 | 39.370 | 127 | 77 | 0 | 3 | 129 | 6 | 132 | 2.46e-24 | 100 |
MS.gene88151.t1 | MTR_4g019670 | 40.157 | 127 | 76 | 0 | 3 | 129 | 6 | 132 | 4.93e-24 | 99.8 |
MS.gene88151.t1 | MTR_5g047560 | 36.538 | 156 | 81 | 3 | 1 | 156 | 1 | 138 | 4.32e-23 | 90.9 |
MS.gene88151.t1 | MTR_7g055940 | 48.113 | 106 | 27 | 2 | 1 | 106 | 1 | 78 | 6.75e-23 | 88.6 |
MS.gene88151.t1 | MTR_3g093900 | 31.690 | 142 | 97 | 0 | 3 | 144 | 6 | 147 | 1.12e-21 | 93.2 |
MS.gene88151.t1 | MTR_2g035590 | 56.790 | 81 | 35 | 0 | 74 | 154 | 1 | 81 | 1.82e-19 | 80.1 |
MS.gene88151.t1 | MTR_1g114730 | 31.858 | 113 | 70 | 3 | 1 | 107 | 1 | 112 | 2.31e-13 | 68.6 |
MS.gene88151.t1 | MTR_6g018920 | 32.743 | 113 | 69 | 4 | 1 | 107 | 1 | 112 | 5.53e-13 | 67.4 |
MS.gene88151.t1 | MTR_6g005450 | 33.628 | 113 | 68 | 4 | 1 | 107 | 1 | 112 | 3.74e-12 | 65.1 |
MS.gene88151.t1 | MTR_4g084780 | 38.739 | 111 | 52 | 2 | 74 | 168 | 1 | 111 | 9.03e-12 | 61.2 |
MS.gene88151.t1 | MTR_6g005440 | 35.398 | 113 | 66 | 3 | 1 | 107 | 1 | 112 | 2.08e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88151.t1 | AT5G48670 | 55.844 | 154 | 67 | 1 | 1 | 154 | 1 | 153 | 7.79e-46 | 155 |
MS.gene88151.t1 | AT1G65330 | 42.246 | 187 | 94 | 3 | 3 | 176 | 2 | 187 | 1.51e-40 | 140 |
MS.gene88151.t1 | AT1G65300 | 41.436 | 181 | 97 | 2 | 3 | 175 | 2 | 181 | 2.08e-40 | 139 |
MS.gene88151.t1 | AT5G26630 | 43.979 | 191 | 96 | 2 | 1 | 181 | 1 | 190 | 1.02e-38 | 133 |
MS.gene88151.t1 | AT5G26650 | 36.190 | 210 | 115 | 4 | 5 | 204 | 3 | 203 | 1.11e-34 | 127 |
MS.gene88151.t1 | AT5G27960 | 39.881 | 168 | 90 | 3 | 5 | 162 | 3 | 169 | 3.98e-34 | 124 |
MS.gene88151.t1 | AT1G31630 | 36.905 | 168 | 95 | 3 | 3 | 161 | 2 | 167 | 1.35e-33 | 123 |
MS.gene88151.t1 | AT1G31640 | 39.735 | 151 | 89 | 2 | 3 | 153 | 2 | 150 | 6.93e-32 | 121 |
MS.gene88151.t1 | AT3G05860 | 37.975 | 158 | 97 | 1 | 1 | 158 | 1 | 157 | 1.18e-30 | 112 |
MS.gene88151.t1 | AT3G05860 | 37.975 | 158 | 97 | 1 | 1 | 158 | 1 | 157 | 1.88e-30 | 113 |
MS.gene88151.t1 | AT3G05860 | 37.975 | 158 | 97 | 1 | 1 | 158 | 1 | 157 | 2.12e-30 | 113 |
MS.gene88151.t1 | AT5G27810 | 55.914 | 93 | 41 | 0 | 29 | 121 | 1 | 93 | 7.87e-30 | 107 |
MS.gene88151.t1 | AT2G28700 | 36.810 | 163 | 98 | 2 | 1 | 161 | 1 | 160 | 1.44e-28 | 110 |
MS.gene88151.t1 | AT1G22590 | 32.099 | 162 | 106 | 1 | 1 | 162 | 1 | 158 | 5.74e-26 | 99.4 |
MS.gene88151.t1 | AT5G26580 | 34.416 | 154 | 86 | 2 | 1 | 154 | 1 | 139 | 2.55e-23 | 96.3 |
MS.gene88151.t1 | AT5G06500 | 35.669 | 157 | 99 | 2 | 1 | 157 | 1 | 155 | 6.68e-23 | 93.2 |
MS.gene88151.t1 | AT2G40210 | 37.209 | 129 | 80 | 1 | 1 | 129 | 1 | 128 | 1.35e-17 | 80.5 |
MS.gene88151.t1 | AT5G58890 | 37.795 | 127 | 68 | 5 | 6 | 123 | 6 | 130 | 2.21e-15 | 73.6 |
MS.gene88151.t1 | AT5G55690 | 42.308 | 78 | 38 | 2 | 1 | 71 | 1 | 78 | 2.29e-12 | 65.1 |
MS.gene88151.t1 | AT5G55690 | 42.308 | 78 | 38 | 2 | 1 | 71 | 1 | 78 | 2.29e-12 | 65.1 |
MS.gene88151.t1 | AT2G15660 | 30.088 | 113 | 74 | 2 | 38 | 150 | 31 | 138 | 3.26e-11 | 61.6 |
MS.gene88151.t1 | AT5G27090 | 34.444 | 90 | 58 | 1 | 7 | 95 | 23 | 112 | 7.04e-11 | 59.7 |
MS.gene88151.t1 | AT5G27944 | 38.095 | 84 | 48 | 2 | 24 | 103 | 41 | 124 | 8.20e-11 | 60.1 |
Find 58 sgRNAs with CRISPR-Local
Find 59 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCTTTGGTGAGATCAATTA+TGG | 0.234667 | 4.3:-68920690 | MS.gene88151:CDS |
TACCAATGTCCTTCAAATTA+TGG | 0.254451 | 4.3:+68920880 | None:intergenic |
TGAAACAAAGAAAAGAAAAT+AGG | 0.262024 | 4.3:-68921007 | MS.gene88151:CDS |
ATAATTTCATCATCATTAAT+AGG | 0.285530 | 4.3:+68920768 | None:intergenic |
GTGAGATCAATTATGGAGTT+TGG | 0.309548 | 4.3:-68920683 | MS.gene88151:CDS |
AACAAAGGGTCTATTGAAAA+AGG | 0.314581 | 4.3:-68921240 | MS.gene88151:CDS |
AGCATCTAGGAGTGAGGAAA+TGG | 0.344298 | 4.3:-68920820 | MS.gene88151:CDS |
ATGAGCCTCAACCTGAGATT+TGG | 0.345571 | 4.3:-68921160 | MS.gene88151:CDS |
ATCCTTCAAGGTAGTAAATC+AGG | 0.372648 | 4.3:+68920660 | None:intergenic |
TATGCAAAGTCAATTATTGA+TGG | 0.385590 | 4.3:-68920748 | MS.gene88151:CDS |
GAAGGACATTGGTAGACGTT+TGG | 0.410243 | 4.3:-68920871 | MS.gene88151:CDS |
CTAGATGCTGTTGGAGGTGG+TGG | 0.417295 | 4.3:+68920834 | None:intergenic |
GAAACAAAGAAAAGAAAATA+GGG | 0.419680 | 4.3:-68921006 | MS.gene88151:CDS |
GGCCTGATTTACTACCTTGA+AGG | 0.422090 | 4.3:-68920662 | None:intergenic |
AGTGAGGAAATGGGAATTGT+GGG | 0.443118 | 4.3:-68920810 | MS.gene88151:CDS |
GTTGATTGACCATAATTTGA+AGG | 0.445081 | 4.3:-68920889 | MS.gene88151:CDS |
TTGTGGGTCATGGCCATGTT+GGG | 0.452922 | 4.3:-68920794 | MS.gene88151:CDS |
CACAACCATGGCTAGAAGTA+AGG | 0.457305 | 4.3:-68921318 | None:intergenic |
TCTGGTGAAGGCCAAATCTC+AGG | 0.467267 | 4.3:+68921149 | None:intergenic |
CTCATAAGAGCCATACACTA+TGG | 0.467809 | 4.3:+68921178 | None:intergenic |
ATTGTGGGTCATGGCCATGT+TGG | 0.468248 | 4.3:-68920795 | MS.gene88151:CDS |
CTCCTAGATGCTGTTGGAGG+TGG | 0.476689 | 4.3:+68920831 | None:intergenic |
TCAATTATTGATGGACTCAA+TGG | 0.482426 | 4.3:-68920739 | MS.gene88151:CDS |
TTGATTTGAGTTATCTTACT+TGG | 0.482489 | 4.3:-68920911 | MS.gene88151:CDS |
TCCTCACTCCTAGATGCTGT+TGG | 0.486555 | 4.3:+68920825 | None:intergenic |
CTTGACACAAAGGATTCTGA+AGG | 0.491635 | 4.3:-68921045 | MS.gene88151:CDS |
TGCAGCATCATTGACAATGA+AGG | 0.502295 | 4.3:+68921286 | None:intergenic |
TTTGTGTCAAGAAAGTCTCT+TGG | 0.512375 | 4.3:+68921057 | None:intergenic |
GATGCTGTTGGAGGTGGTGG+TGG | 0.513228 | 4.3:+68920837 | None:intergenic |
GAGTGAGGAAATGGGAATTG+TGG | 0.516317 | 4.3:-68920811 | MS.gene88151:CDS |
GACCATAATTTGAAGGACAT+TGG | 0.517963 | 4.3:-68920882 | MS.gene88151:CDS |
GGACATTGGTAGACGTTTGG+CGG | 0.524285 | 4.3:-68920868 | MS.gene88151:CDS |
TCACTCCTAGATGCTGTTGG+AGG | 0.527908 | 4.3:+68920828 | None:intergenic |
CACCACCTCCAACAGCATCT+AGG | 0.540352 | 4.3:-68920833 | MS.gene88151:CDS |
GCATCTAGGAGTGAGGAAAT+GGG | 0.544227 | 4.3:-68920819 | MS.gene88151:CDS |
ATGTCTCATTGTCTTAATGA+AGG | 0.544347 | 4.3:-68920963 | MS.gene88151:CDS |
CCATAATTGATCTCACCAAA+GGG | 0.558369 | 4.3:+68920690 | None:intergenic |
GAAGCCTGTGCCATAGTGTA+TGG | 0.560968 | 4.3:-68921188 | MS.gene88151:CDS |
GAGATTTGGCCTTCACCAGA+GGG | 0.565461 | 4.3:-68921146 | MS.gene88151:CDS |
TTTAACCTTACTTCTAGCCA+TGG | 0.572129 | 4.3:+68921313 | None:intergenic |
GATTTGGCCTTCACCAGAGG+GGG | 0.573799 | 4.3:-68921144 | MS.gene88151:CDS |
TCCATAATTGATCTCACCAA+AGG | 0.580970 | 4.3:+68920689 | None:intergenic |
GTGCACGAGACAGTGCCCTT+TGG | 0.582311 | 4.3:-68920705 | MS.gene88151:CDS |
AAGAGACTTTCTTGACACAA+AGG | 0.587821 | 4.3:-68921055 | MS.gene88151:CDS |
CATTAATAGGTATCCCAACA+TGG | 0.589301 | 4.3:+68920781 | None:intergenic |
GAAGGCCAAATCTCAGGTTG+AGG | 0.598100 | 4.3:+68921155 | None:intergenic |
ACAGGCTTCAATGCCACAGA+GGG | 0.601811 | 4.3:+68921202 | None:intergenic |
TTGATGGACTCAATGGTGGC+TGG | 0.607204 | 4.3:-68920732 | MS.gene88151:CDS |
TGAGATTTGGCCTTCACCAG+AGG | 0.614269 | 4.3:-68921147 | MS.gene88151:CDS |
GAAATGGGAATTGTGGGTCA+TGG | 0.616732 | 4.3:-68920804 | MS.gene88151:CDS |
TCCAACAGCATCTAGGAGTG+AGG | 0.643310 | 4.3:-68920826 | MS.gene88151:CDS |
AGATTTGGCCTTCACCAGAG+GGG | 0.650878 | 4.3:-68921145 | MS.gene88151:CDS |
TCATTGTCAATGATGCTGCA+AGG | 0.652548 | 4.3:-68921283 | MS.gene88151:CDS |
AGAGCCATACACTATGGCAC+AGG | 0.656790 | 4.3:+68921184 | None:intergenic |
ATTATTGATGGACTCAATGG+TGG | 0.666274 | 4.3:-68920736 | MS.gene88151:CDS |
GCTGAACTTAGCACCCTCTG+TGG | 0.677042 | 4.3:-68921215 | MS.gene88151:CDS |
TGTGCACGACAATATGTCAA+CGG | 0.688304 | 4.3:-68920934 | MS.gene88151:CDS |
CACAGGCTTCAATGCCACAG+AGG | 0.696692 | 4.3:+68921201 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAATTTCATCATCATTAAT+AGG | + | chr4.3:68921211-68921230 | None:intergenic | 15.0% |
!! | AACATACAAAAAAAGAACAA+AGG | - | chr4.3:68920721-68920740 | MS.gene88151:CDS | 20.0% |
!! | ACATACAAAAAAAGAACAAA+GGG | - | chr4.3:68920722-68920741 | MS.gene88151:CDS | 20.0% |
!! | GAAACAAAGAAAAGAAAATA+GGG | - | chr4.3:68920970-68920989 | MS.gene88151:CDS | 20.0% |
!! | TGAAACAAAGAAAAGAAAAT+AGG | - | chr4.3:68920969-68920988 | MS.gene88151:CDS | 20.0% |
! | TATGCAAAGTCAATTATTGA+TGG | - | chr4.3:68921228-68921247 | MS.gene88151:CDS | 25.0% |
!! | TTGATTTGAGTTATCTTACT+TGG | - | chr4.3:68921065-68921084 | MS.gene88151:CDS | 25.0% |
AACAAAGGGTCTATTGAAAA+AGG | - | chr4.3:68920736-68920755 | MS.gene88151:CDS | 30.0% | |
ATGTCTCATTGTCTTAATGA+AGG | - | chr4.3:68921013-68921032 | MS.gene88151:CDS | 30.0% | |
GTTGATTGACCATAATTTGA+AGG | - | chr4.3:68921087-68921106 | MS.gene88151:CDS | 30.0% | |
TACCAATGTCCTTCAAATTA+TGG | + | chr4.3:68921099-68921118 | None:intergenic | 30.0% | |
!! | TCAATTATTGATGGACTCAA+TGG | - | chr4.3:68921237-68921256 | MS.gene88151:CDS | 30.0% |
AAGAGACTTTCTTGACACAA+AGG | - | chr4.3:68920921-68920940 | MS.gene88151:CDS | 35.0% | |
CATTAATAGGTATCCCAACA+TGG | + | chr4.3:68921198-68921217 | None:intergenic | 35.0% | |
CCATAATTGATCTCACCAAA+GGG | + | chr4.3:68921289-68921308 | None:intergenic | 35.0% | |
GACCATAATTTGAAGGACAT+TGG | - | chr4.3:68921094-68921113 | MS.gene88151:CDS | 35.0% | |
GTGAGATCAATTATGGAGTT+TGG | - | chr4.3:68921293-68921312 | MS.gene88151:CDS | 35.0% | |
TCCATAATTGATCTCACCAA+AGG | + | chr4.3:68921290-68921309 | None:intergenic | 35.0% | |
TTTGTGTCAAGAAAGTCTCT+TGG | + | chr4.3:68920922-68920941 | None:intergenic | 35.0% | |
!! | ATTATTGATGGACTCAATGG+TGG | - | chr4.3:68921240-68921259 | MS.gene88151:CDS | 35.0% |
!! | TGAATTTTGAGAGCACAGAT+TGG | + | chr4.3:68920859-68920878 | None:intergenic | 35.0% |
AGTGAGGAAATGGGAATTGT+GGG | - | chr4.3:68921166-68921185 | MS.gene88151:CDS | 40.0% | |
CCCTTTGGTGAGATCAATTA+TGG | - | chr4.3:68921286-68921305 | MS.gene88151:CDS | 40.0% | |
CTCATAAGAGCCATACACTA+TGG | + | chr4.3:68920801-68920820 | None:intergenic | 40.0% | |
CTTGACACAAAGGATTCTGA+AGG | - | chr4.3:68920931-68920950 | MS.gene88151:CDS | 40.0% | |
TCATTGTCAATGATGCTGCA+AGG | - | chr4.3:68920693-68920712 | MS.gene88151:CDS | 40.0% | |
TGCAGCATCATTGACAATGA+AGG | + | chr4.3:68920693-68920712 | None:intergenic | 40.0% | |
TGTGCACGACAATATGTCAA+CGG | - | chr4.3:68921042-68921061 | MS.gene88151:CDS | 40.0% | |
AGCATCTAGGAGTGAGGAAA+TGG | - | chr4.3:68921156-68921175 | MS.gene88151:CDS | 45.0% | |
ATGAGCCTCAACCTGAGATT+TGG | - | chr4.3:68920816-68920835 | MS.gene88151:CDS | 45.0% | |
GAAATGGGAATTGTGGGTCA+TGG | - | chr4.3:68921172-68921191 | MS.gene88151:CDS | 45.0% | |
GAAGGACATTGGTAGACGTT+TGG | - | chr4.3:68921105-68921124 | MS.gene88151:CDS | 45.0% | |
GAGTGAGGAAATGGGAATTG+TGG | - | chr4.3:68921165-68921184 | MS.gene88151:CDS | 45.0% | |
GCATCTAGGAGTGAGGAAAT+GGG | - | chr4.3:68921157-68921176 | MS.gene88151:CDS | 45.0% | |
ACAGGCTTCAATGCCACAGA+GGG | + | chr4.3:68920777-68920796 | None:intergenic | 50.0% | |
AGAGCCATACACTATGGCAC+AGG | + | chr4.3:68920795-68920814 | None:intergenic | 50.0% | |
ATTGTGGGTCATGGCCATGT+TGG | - | chr4.3:68921181-68921200 | MS.gene88151:CDS | 50.0% | |
GAAGCCTGTGCCATAGTGTA+TGG | - | chr4.3:68920788-68920807 | MS.gene88151:CDS | 50.0% | |
GGACATTGGTAGACGTTTGG+CGG | - | chr4.3:68921108-68921127 | MS.gene88151:CDS | 50.0% | |
TCACTCCTAGATGCTGTTGG+AGG | + | chr4.3:68921151-68921170 | None:intergenic | 50.0% | |
TCCAACAGCATCTAGGAGTG+AGG | - | chr4.3:68921150-68921169 | MS.gene88151:CDS | 50.0% | |
TCCTCACTCCTAGATGCTGT+TGG | + | chr4.3:68921154-68921173 | None:intergenic | 50.0% | |
TCTGGTGAAGGCCAAATCTC+AGG | + | chr4.3:68920830-68920849 | None:intergenic | 50.0% | |
TTGTGGGTCATGGCCATGTT+GGG | - | chr4.3:68921182-68921201 | MS.gene88151:CDS | 50.0% | |
! | AGATTTGGCCTTCACCAGAG+GGG | - | chr4.3:68920831-68920850 | MS.gene88151:CDS | 50.0% |
! | GAAGGCCAAATCTCAGGTTG+AGG | + | chr4.3:68920824-68920843 | None:intergenic | 50.0% |
! | GAGATTTGGCCTTCACCAGA+GGG | - | chr4.3:68920830-68920849 | MS.gene88151:CDS | 50.0% |
! | TGAGATTTGGCCTTCACCAG+AGG | - | chr4.3:68920829-68920848 | MS.gene88151:CDS | 50.0% |
!! | TTGATGGACTCAATGGTGGC+TGG | - | chr4.3:68921244-68921263 | MS.gene88151:CDS | 50.0% |
CACAGGCTTCAATGCCACAG+AGG | + | chr4.3:68920778-68920797 | None:intergenic | 55.0% | |
CACCACCTCCAACAGCATCT+AGG | - | chr4.3:68921143-68921162 | MS.gene88151:CDS | 55.0% | |
CTAGATGCTGTTGGAGGTGG+TGG | + | chr4.3:68921145-68921164 | None:intergenic | 55.0% | |
CTCCTAGATGCTGTTGGAGG+TGG | + | chr4.3:68921148-68921167 | None:intergenic | 55.0% | |
GCTGAACTTAGCACCCTCTG+TGG | - | chr4.3:68920761-68920780 | MS.gene88151:CDS | 55.0% | |
! | GATTTGGCCTTCACCAGAGG+GGG | - | chr4.3:68920832-68920851 | MS.gene88151:CDS | 55.0% |
AGCACAGATTGGACCCCCTC+TGG | + | chr4.3:68920848-68920867 | None:intergenic | 60.0% | |
GATTGGACCCCCTCTGGTGA+AGG | + | chr4.3:68920842-68920861 | None:intergenic | 60.0% | |
GTGCACGAGACAGTGCCCTT+TGG | - | chr4.3:68921271-68921290 | MS.gene88151:CDS | 60.0% | |
! | GATGCTGTTGGAGGTGGTGG+TGG | + | chr4.3:68921142-68921161 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 68920665 | 68921333 | 68920665 | ID=MS.gene88151 |
chr4.3 | mRNA | 68920665 | 68921333 | 68920665 | ID=MS.gene88151.t1;Parent=MS.gene88151 |
chr4.3 | exon | 68920665 | 68921333 | 68920665 | ID=MS.gene88151.t1.exon1;Parent=MS.gene88151.t1 |
chr4.3 | CDS | 68920665 | 68921333 | 68920665 | ID=cds.MS.gene88151.t1;Parent=MS.gene88151.t1 |
Gene Sequence |
Protein sequence |