Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88214.t1 | XP_013455804.1 | 98 | 149 | 3 | 0 | 1 | 149 | 1 | 149 | 3.50E-81 | 310.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88214.t1 | Q9FMR3 | 66.4 | 146 | 48 | 1 | 1 | 145 | 1 | 146 | 1.4e-51 | 203.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88214.t1 | A0A072UVE9 | 98.0 | 149 | 3 | 0 | 1 | 149 | 1 | 149 | 2.5e-81 | 310.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene88214.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88214.t1 | MTR_4g052620 | 97.987 | 149 | 3 | 0 | 1 | 149 | 1 | 149 | 1.88e-107 | 307 |
MS.gene88214.t1 | MTR_2g086690 | 76.552 | 145 | 33 | 1 | 6 | 149 | 5 | 149 | 7.39e-81 | 239 |
MS.gene88214.t1 | MTR_7g105170 | 60.000 | 150 | 57 | 2 | 3 | 149 | 2 | 151 | 7.27e-63 | 194 |
MS.gene88214.t1 | MTR_1g096430 | 46.452 | 155 | 76 | 4 | 1 | 155 | 3 | 150 | 6.99e-40 | 137 |
MS.gene88214.t1 | MTR_4g036030 | 45.098 | 153 | 71 | 5 | 6 | 155 | 8 | 150 | 5.85e-39 | 135 |
MS.gene88214.t1 | MTR_8g076110 | 45.570 | 158 | 73 | 5 | 1 | 155 | 2 | 149 | 6.01e-39 | 134 |
MS.gene88214.t1 | MTR_6g011860 | 46.043 | 139 | 70 | 2 | 3 | 141 | 13 | 146 | 1.07e-37 | 132 |
MS.gene88214.t1 | MTR_5g021710 | 48.551 | 138 | 62 | 4 | 1 | 135 | 4 | 135 | 1.56e-37 | 131 |
MS.gene88214.t1 | MTR_5g012080 | 41.830 | 153 | 78 | 4 | 6 | 155 | 8 | 152 | 1.64e-37 | 131 |
MS.gene88214.t1 | MTR_2g093810 | 48.252 | 143 | 64 | 4 | 4 | 143 | 13 | 148 | 3.79e-37 | 130 |
MS.gene88214.t1 | MTR_5g041940 | 46.429 | 140 | 69 | 3 | 5 | 144 | 3 | 136 | 5.15e-37 | 128 |
MS.gene88214.t1 | MTR_2g064090 | 48.889 | 135 | 65 | 4 | 4 | 138 | 5 | 135 | 5.35e-37 | 130 |
MS.gene88214.t1 | MTR_4g134460 | 45.985 | 137 | 69 | 2 | 2 | 138 | 51 | 182 | 2.44e-36 | 130 |
MS.gene88214.t1 | MTR_3g116070 | 47.407 | 135 | 66 | 2 | 2 | 135 | 20 | 150 | 2.50e-36 | 128 |
MS.gene88214.t1 | MTR_8g467490 | 43.836 | 146 | 76 | 3 | 1 | 145 | 10 | 150 | 4.05e-36 | 128 |
MS.gene88214.t1 | MTR_1g008740 | 45.185 | 135 | 69 | 2 | 2 | 135 | 10 | 140 | 6.09e-36 | 127 |
MS.gene88214.t1 | MTR_1g008740 | 45.185 | 135 | 69 | 2 | 2 | 135 | 24 | 154 | 7.48e-36 | 127 |
MS.gene88214.t1 | MTR_2g062730 | 45.255 | 137 | 67 | 3 | 2 | 135 | 7 | 138 | 8.91e-36 | 126 |
MS.gene88214.t1 | MTR_6g477900 | 42.568 | 148 | 81 | 3 | 5 | 152 | 6 | 149 | 1.78e-35 | 123 |
MS.gene88214.t1 | MTR_4g081870 | 45.000 | 140 | 71 | 3 | 5 | 144 | 9 | 142 | 3.78e-35 | 123 |
MS.gene88214.t1 | MTR_4g101680 | 45.113 | 133 | 64 | 4 | 6 | 135 | 8 | 134 | 4.81e-35 | 125 |
MS.gene88214.t1 | MTR_5g076850 | 46.212 | 132 | 67 | 3 | 4 | 135 | 5 | 132 | 6.89e-35 | 128 |
MS.gene88214.t1 | MTR_4g075980 | 49.618 | 131 | 59 | 3 | 7 | 135 | 17 | 142 | 7.23e-35 | 123 |
MS.gene88214.t1 | MTR_2g078700 | 46.970 | 132 | 64 | 3 | 5 | 135 | 23 | 149 | 1.04e-34 | 124 |
MS.gene88214.t1 | MTR_8g059170 | 41.558 | 154 | 80 | 4 | 4 | 155 | 13 | 158 | 1.31e-34 | 123 |
MS.gene88214.t1 | MTR_5g040420 | 44.118 | 136 | 70 | 3 | 1 | 135 | 10 | 140 | 2.33e-34 | 124 |
MS.gene88214.t1 | MTR_3g064580 | 45.455 | 132 | 68 | 3 | 4 | 135 | 5 | 132 | 3.42e-34 | 126 |
MS.gene88214.t1 | MTR_6g084430 | 45.185 | 135 | 68 | 4 | 1 | 135 | 1 | 129 | 4.63e-34 | 122 |
MS.gene88214.t1 | MTR_4g089135 | 45.139 | 144 | 69 | 4 | 5 | 145 | 15 | 151 | 5.46e-34 | 122 |
MS.gene88214.t1 | MTR_3g096920 | 44.604 | 139 | 70 | 3 | 2 | 140 | 4 | 135 | 9.98e-34 | 120 |
MS.gene88214.t1 | MTR_3g088110 | 46.099 | 141 | 65 | 4 | 2 | 140 | 4 | 135 | 1.78e-33 | 119 |
MS.gene88214.t1 | MTR_3g096920 | 43.662 | 142 | 73 | 3 | 2 | 143 | 4 | 138 | 1.88e-33 | 120 |
MS.gene88214.t1 | MTR_8g024480 | 46.617 | 133 | 62 | 4 | 6 | 135 | 16 | 142 | 1.89e-33 | 122 |
MS.gene88214.t1 | MTR_2g086880 | 48.438 | 128 | 61 | 4 | 7 | 134 | 20 | 142 | 2.06e-33 | 123 |
MS.gene88214.t1 | MTR_3g070030 | 46.212 | 132 | 63 | 4 | 5 | 135 | 19 | 143 | 2.16e-33 | 120 |
MS.gene88214.t1 | MTR_2g086880 | 48.438 | 128 | 61 | 4 | 7 | 134 | 20 | 142 | 2.35e-33 | 123 |
MS.gene88214.t1 | MTR_3g109340 | 45.185 | 135 | 68 | 3 | 2 | 135 | 19 | 148 | 2.46e-33 | 120 |
MS.gene88214.t1 | MTR_3g109340 | 45.185 | 135 | 68 | 3 | 2 | 135 | 19 | 148 | 2.50e-33 | 120 |
MS.gene88214.t1 | MTR_2g079990 | 43.885 | 139 | 68 | 4 | 4 | 140 | 15 | 145 | 3.95e-33 | 120 |
MS.gene88214.t1 | MTR_2g079990 | 43.885 | 139 | 68 | 4 | 4 | 140 | 15 | 145 | 4.94e-33 | 120 |
MS.gene88214.t1 | MTR_7g085220 | 42.466 | 146 | 67 | 4 | 2 | 137 | 5 | 143 | 5.70e-33 | 119 |
MS.gene88214.t1 | MTR_8g023840 | 45.775 | 142 | 71 | 4 | 6 | 145 | 12 | 149 | 1.04e-32 | 119 |
MS.gene88214.t1 | MTR_5g069030 | 47.328 | 131 | 65 | 3 | 5 | 135 | 25 | 151 | 1.05e-32 | 122 |
MS.gene88214.t1 | MTR_8g094580 | 41.892 | 148 | 76 | 4 | 5 | 152 | 7 | 144 | 1.36e-32 | 117 |
MS.gene88214.t1 | MTR_5g014300 | 46.377 | 138 | 65 | 4 | 4 | 135 | 5 | 139 | 1.54e-32 | 118 |
MS.gene88214.t1 | MTR_3g093040 | 43.939 | 132 | 70 | 3 | 4 | 135 | 107 | 234 | 3.59e-32 | 116 |
MS.gene88214.t1 | MTR_2157s0010 | 44.681 | 141 | 71 | 3 | 5 | 143 | 8 | 143 | 5.80e-32 | 115 |
MS.gene88214.t1 | MTR_4g035590 | 45.865 | 133 | 63 | 4 | 6 | 135 | 9 | 135 | 6.01e-32 | 117 |
MS.gene88214.t1 | MTR_3g093050 | 45.113 | 133 | 69 | 3 | 3 | 135 | 20 | 148 | 7.03e-32 | 119 |
MS.gene88214.t1 | MTR_3g093050 | 45.113 | 133 | 69 | 3 | 3 | 135 | 20 | 148 | 7.95e-32 | 119 |
MS.gene88214.t1 | MTR_1g069805 | 42.105 | 133 | 71 | 3 | 4 | 135 | 9 | 136 | 8.10e-32 | 115 |
MS.gene88214.t1 | MTR_6g012670 | 46.212 | 132 | 63 | 4 | 5 | 135 | 20 | 144 | 1.63e-31 | 115 |
MS.gene88214.t1 | MTR_7g011130 | 45.038 | 131 | 66 | 3 | 5 | 135 | 19 | 143 | 1.79e-31 | 115 |
MS.gene88214.t1 | MTR_8g099750 | 41.958 | 143 | 75 | 3 | 5 | 146 | 14 | 149 | 1.94e-31 | 112 |
MS.gene88214.t1 | MTR_3g435150 | 44.697 | 132 | 67 | 3 | 4 | 135 | 15 | 140 | 1.95e-31 | 114 |
MS.gene88214.t1 | MTR_4g108760 | 44.275 | 131 | 67 | 3 | 5 | 135 | 17 | 141 | 2.22e-31 | 115 |
MS.gene88214.t1 | MTR_8g023860 | 42.537 | 134 | 73 | 3 | 3 | 135 | 10 | 140 | 2.41e-31 | 116 |
MS.gene88214.t1 | MTR_7g100990 | 44.295 | 149 | 69 | 5 | 2 | 143 | 8 | 149 | 3.82e-31 | 114 |
MS.gene88214.t1 | MTR_4g098630 | 41.830 | 153 | 81 | 5 | 4 | 154 | 5 | 151 | 6.21e-31 | 113 |
MS.gene88214.t1 | MTR_2g068920 | 43.506 | 154 | 76 | 7 | 2 | 149 | 17 | 165 | 6.66e-31 | 112 |
MS.gene88214.t1 | MTR_7g011120 | 41.379 | 145 | 79 | 3 | 5 | 149 | 8 | 146 | 8.45e-31 | 113 |
MS.gene88214.t1 | MTR_8g023900 | 41.060 | 151 | 80 | 4 | 1 | 145 | 184 | 331 | 9.01e-31 | 115 |
MS.gene88214.t1 | MTR_8g023900 | 40.411 | 146 | 82 | 4 | 1 | 145 | 8 | 149 | 1.79e-28 | 109 |
MS.gene88214.t1 | MTR_7g097090 | 42.105 | 133 | 71 | 3 | 4 | 135 | 9 | 136 | 9.06e-31 | 112 |
MS.gene88214.t1 | MTR_2g068880 | 43.506 | 154 | 76 | 7 | 2 | 149 | 18 | 166 | 1.47e-30 | 112 |
MS.gene88214.t1 | MTR_6g032770 | 44.361 | 133 | 66 | 4 | 5 | 135 | 18 | 144 | 1.58e-30 | 113 |
MS.gene88214.t1 | MTR_2g064470 | 43.704 | 135 | 68 | 4 | 1 | 135 | 7 | 133 | 1.61e-30 | 112 |
MS.gene88214.t1 | MTR_3g096140 | 40.559 | 143 | 80 | 4 | 7 | 149 | 9 | 146 | 1.95e-30 | 111 |
MS.gene88214.t1 | MTR_8g023930 | 43.284 | 134 | 72 | 3 | 3 | 135 | 22 | 152 | 2.40e-30 | 114 |
MS.gene88214.t1 | MTR_2g080010 | 45.522 | 134 | 63 | 4 | 5 | 135 | 15 | 141 | 2.46e-30 | 112 |
MS.gene88214.t1 | MTR_3g096140 | 40.559 | 143 | 80 | 4 | 7 | 149 | 9 | 146 | 1.13e-29 | 110 |
MS.gene88214.t1 | MTR_0036s0150 | 43.939 | 132 | 71 | 3 | 7 | 138 | 7 | 135 | 1.61e-29 | 112 |
MS.gene88214.t1 | MTR_1g090720 | 43.511 | 131 | 70 | 3 | 4 | 134 | 41 | 167 | 2.00e-29 | 112 |
MS.gene88214.t1 | MTR_1g090723 | 40.909 | 132 | 75 | 2 | 7 | 138 | 10 | 138 | 6.30e-29 | 111 |
MS.gene88214.t1 | MTR_1g090723 | 40.909 | 132 | 75 | 2 | 7 | 138 | 10 | 138 | 6.82e-29 | 111 |
MS.gene88214.t1 | MTR_1g090723 | 40.909 | 132 | 75 | 2 | 7 | 138 | 10 | 138 | 7.07e-29 | 111 |
MS.gene88214.t1 | MTR_7g085260 | 41.045 | 134 | 71 | 3 | 5 | 135 | 17 | 145 | 1.10e-28 | 108 |
MS.gene88214.t1 | MTR_7g005280 | 42.361 | 144 | 72 | 5 | 2 | 144 | 12 | 145 | 3.14e-28 | 105 |
MS.gene88214.t1 | MTR_3g098810 | 43.885 | 139 | 66 | 5 | 5 | 139 | 14 | 144 | 7.12e-28 | 102 |
MS.gene88214.t1 | MTR_5g090970 | 45.865 | 133 | 60 | 6 | 7 | 135 | 20 | 144 | 1.13e-27 | 104 |
MS.gene88214.t1 | MTR_8g063550 | 41.085 | 129 | 72 | 3 | 7 | 135 | 8 | 132 | 1.78e-27 | 104 |
MS.gene88214.t1 | MTR_3g098810 | 43.885 | 139 | 66 | 5 | 5 | 139 | 14 | 144 | 2.36e-27 | 102 |
MS.gene88214.t1 | MTR_1g097300 | 44.961 | 129 | 65 | 4 | 7 | 134 | 21 | 144 | 3.25e-27 | 106 |
MS.gene88214.t1 | MTR_8g063550 | 41.085 | 129 | 72 | 3 | 7 | 135 | 8 | 132 | 3.42e-27 | 105 |
MS.gene88214.t1 | MTR_8g063550 | 41.085 | 129 | 72 | 3 | 7 | 135 | 8 | 132 | 3.50e-27 | 105 |
MS.gene88214.t1 | MTR_5g090970 | 44.776 | 134 | 61 | 6 | 7 | 135 | 20 | 145 | 4.56e-27 | 103 |
MS.gene88214.t1 | MTR_3g070040 | 42.857 | 133 | 63 | 5 | 5 | 135 | 8 | 129 | 2.64e-25 | 99.0 |
MS.gene88214.t1 | MTR_8g023880 | 38.926 | 149 | 69 | 6 | 4 | 136 | 6 | 148 | 4.25e-25 | 97.4 |
MS.gene88214.t1 | MTR_8g093580 | 40.310 | 129 | 73 | 3 | 7 | 135 | 8 | 132 | 1.28e-24 | 98.6 |
MS.gene88214.t1 | MTR_4g094302 | 40.909 | 132 | 64 | 4 | 5 | 135 | 11 | 129 | 4.95e-23 | 89.4 |
MS.gene88214.t1 | MTR_4g094302 | 40.909 | 132 | 64 | 4 | 5 | 135 | 11 | 129 | 8.92e-23 | 89.4 |
MS.gene88214.t1 | MTR_3g096140 | 37.209 | 129 | 76 | 4 | 21 | 149 | 2 | 125 | 5.54e-22 | 90.1 |
MS.gene88214.t1 | MTR_8g094580 | 43.820 | 89 | 45 | 2 | 63 | 151 | 6 | 89 | 1.08e-18 | 79.7 |
MS.gene88214.t1 | MTR_3g096400 | 31.169 | 154 | 92 | 4 | 1 | 152 | 1 | 142 | 9.72e-16 | 71.2 |
MS.gene88214.t1 | MTR_7g070140 | 38.372 | 86 | 52 | 1 | 51 | 135 | 5 | 90 | 4.62e-15 | 68.2 |
MS.gene88214.t1 | MTR_8g093790 | 33.588 | 131 | 65 | 6 | 5 | 135 | 10 | 118 | 1.97e-11 | 59.7 |
MS.gene88214.t1 | MTR_7g083360 | 28.571 | 133 | 89 | 3 | 2 | 134 | 7 | 133 | 3.77e-11 | 58.2 |
MS.gene88214.t1 | MTR_1g087190 | 50.000 | 48 | 24 | 0 | 7 | 54 | 7 | 54 | 8.02e-11 | 54.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88214.t1 | AT5G22380 | 66.438 | 146 | 48 | 1 | 1 | 145 | 1 | 146 | 5.98e-67 | 203 |
MS.gene88214.t1 | AT3G44350 | 60.256 | 156 | 60 | 1 | 1 | 156 | 1 | 154 | 4.92e-66 | 198 |
MS.gene88214.t1 | AT3G44350 | 63.194 | 144 | 53 | 0 | 1 | 144 | 1 | 144 | 5.35e-64 | 196 |
MS.gene88214.t1 | AT1G71930 | 49.630 | 135 | 65 | 3 | 1 | 135 | 5 | 136 | 1.32e-39 | 136 |
MS.gene88214.t1 | AT1G71930 | 49.630 | 135 | 65 | 3 | 1 | 135 | 5 | 136 | 1.32e-39 | 136 |
MS.gene88214.t1 | AT2G17040 | 49.265 | 136 | 62 | 3 | 2 | 135 | 3 | 133 | 2.40e-38 | 132 |
MS.gene88214.t1 | AT4G36160 | 45.806 | 155 | 71 | 5 | 4 | 155 | 13 | 157 | 1.13e-37 | 132 |
MS.gene88214.t1 | AT4G36160 | 45.806 | 155 | 71 | 5 | 4 | 155 | 9 | 153 | 1.17e-37 | 132 |
MS.gene88214.t1 | AT4G36160 | 45.806 | 155 | 71 | 5 | 4 | 155 | 9 | 153 | 1.17e-37 | 132 |
MS.gene88214.t1 | AT2G18060 | 45.161 | 155 | 72 | 5 | 4 | 155 | 8 | 152 | 3.16e-37 | 131 |
MS.gene88214.t1 | AT2G18060 | 45.161 | 155 | 72 | 5 | 4 | 155 | 8 | 152 | 3.16e-37 | 131 |
MS.gene88214.t1 | AT1G26870 | 48.551 | 138 | 61 | 4 | 1 | 135 | 12 | 142 | 5.20e-37 | 131 |
MS.gene88214.t1 | AT4G17980 | 45.139 | 144 | 75 | 4 | 4 | 146 | 5 | 145 | 1.14e-36 | 127 |
MS.gene88214.t1 | AT2G02450 | 46.512 | 129 | 64 | 2 | 7 | 135 | 53 | 176 | 1.80e-36 | 129 |
MS.gene88214.t1 | AT5G66300 | 42.581 | 155 | 77 | 5 | 4 | 155 | 11 | 156 | 1.84e-36 | 127 |
MS.gene88214.t1 | AT2G02450 | 46.512 | 129 | 64 | 2 | 7 | 135 | 53 | 176 | 2.37e-36 | 129 |
MS.gene88214.t1 | AT4G17980 | 46.099 | 141 | 72 | 4 | 4 | 143 | 5 | 142 | 3.31e-36 | 126 |
MS.gene88214.t1 | AT4G35580 | 48.872 | 133 | 64 | 3 | 3 | 135 | 7 | 135 | 3.42e-36 | 130 |
MS.gene88214.t1 | AT1G12260 | 43.791 | 153 | 73 | 5 | 6 | 155 | 8 | 150 | 3.61e-36 | 127 |
MS.gene88214.t1 | AT4G35580 | 48.872 | 133 | 64 | 3 | 3 | 135 | 7 | 135 | 3.84e-36 | 130 |
MS.gene88214.t1 | AT1G65910 | 43.624 | 149 | 80 | 3 | 4 | 152 | 5 | 149 | 3.96e-36 | 131 |
MS.gene88214.t1 | AT4G35580 | 48.872 | 133 | 64 | 3 | 3 | 135 | 7 | 135 | 4.00e-36 | 130 |
MS.gene88214.t1 | AT1G33060 | 47.761 | 134 | 66 | 3 | 3 | 136 | 22 | 151 | 4.60e-36 | 131 |
MS.gene88214.t1 | AT1G33060 | 47.761 | 134 | 66 | 3 | 3 | 136 | 22 | 151 | 4.85e-36 | 131 |
MS.gene88214.t1 | AT5G62380 | 45.802 | 131 | 68 | 3 | 5 | 135 | 7 | 134 | 6.45e-36 | 127 |
MS.gene88214.t1 | AT5G62380 | 45.802 | 131 | 68 | 3 | 5 | 135 | 7 | 134 | 6.45e-36 | 127 |
MS.gene88214.t1 | AT1G12260 | 43.791 | 153 | 73 | 5 | 6 | 155 | 8 | 150 | 8.12e-36 | 128 |
MS.gene88214.t1 | AT1G69490 | 41.830 | 153 | 79 | 4 | 2 | 154 | 6 | 148 | 8.59e-36 | 125 |
MS.gene88214.t1 | AT4G27410 | 44.138 | 145 | 71 | 4 | 4 | 146 | 13 | 149 | 1.11e-35 | 125 |
MS.gene88214.t1 | AT5G17260 | 46.970 | 132 | 66 | 3 | 4 | 135 | 5 | 132 | 1.16e-35 | 129 |
MS.gene88214.t1 | AT5G39820 | 41.611 | 149 | 81 | 3 | 2 | 149 | 17 | 160 | 1.29e-35 | 126 |
MS.gene88214.t1 | AT5G24590 | 46.667 | 135 | 69 | 2 | 4 | 138 | 12 | 143 | 1.34e-35 | 128 |
MS.gene88214.t1 | AT1G76420 | 44.898 | 147 | 73 | 4 | 2 | 146 | 19 | 159 | 2.37e-35 | 125 |
MS.gene88214.t1 | AT1G62700 | 42.484 | 153 | 75 | 5 | 6 | 155 | 8 | 150 | 3.26e-35 | 126 |
MS.gene88214.t1 | AT1G62700 | 42.484 | 153 | 75 | 5 | 6 | 155 | 8 | 150 | 3.26e-35 | 126 |
MS.gene88214.t1 | AT2G24430 | 45.185 | 135 | 68 | 3 | 2 | 135 | 13 | 142 | 4.65e-35 | 124 |
MS.gene88214.t1 | AT2G24430 | 45.185 | 135 | 68 | 3 | 2 | 135 | 13 | 142 | 4.65e-35 | 124 |
MS.gene88214.t1 | AT3G17730 | 46.565 | 131 | 66 | 3 | 5 | 135 | 6 | 132 | 6.09e-35 | 122 |
MS.gene88214.t1 | AT3G61910 | 45.113 | 133 | 64 | 4 | 6 | 135 | 12 | 138 | 1.29e-34 | 123 |
MS.gene88214.t1 | AT1G79580 | 44.366 | 142 | 71 | 3 | 4 | 142 | 16 | 152 | 1.50e-34 | 124 |
MS.gene88214.t1 | AT1G79580 | 44.366 | 142 | 71 | 3 | 4 | 142 | 16 | 152 | 1.50e-34 | 124 |
MS.gene88214.t1 | AT1G79580 | 44.366 | 142 | 71 | 3 | 4 | 142 | 16 | 152 | 1.50e-34 | 124 |
MS.gene88214.t1 | AT1G79580 | 44.366 | 142 | 71 | 3 | 4 | 142 | 16 | 152 | 1.50e-34 | 124 |
MS.gene88214.t1 | AT1G79580 | 44.366 | 142 | 71 | 3 | 4 | 142 | 16 | 152 | 1.50e-34 | 124 |
MS.gene88214.t1 | AT5G46590 | 46.565 | 131 | 67 | 3 | 5 | 135 | 6 | 133 | 2.01e-34 | 122 |
MS.gene88214.t1 | AT5G46590 | 46.565 | 131 | 67 | 3 | 5 | 135 | 6 | 133 | 2.64e-34 | 122 |
MS.gene88214.t1 | AT2G46770 | 45.865 | 133 | 63 | 4 | 6 | 135 | 17 | 143 | 2.68e-34 | 123 |
MS.gene88214.t1 | AT3G15500 | 44.444 | 144 | 70 | 4 | 4 | 145 | 13 | 148 | 2.71e-34 | 122 |
MS.gene88214.t1 | AT4G27410 | 41.667 | 156 | 76 | 5 | 4 | 146 | 13 | 166 | 3.51e-34 | 122 |
MS.gene88214.t1 | AT1G01720 | 47.101 | 138 | 62 | 4 | 5 | 140 | 7 | 135 | 1.14e-33 | 120 |
MS.gene88214.t1 | AT3G18400 | 43.704 | 135 | 70 | 3 | 1 | 135 | 1 | 129 | 2.43e-33 | 119 |
MS.gene88214.t1 | AT1G52890 | 43.750 | 144 | 71 | 4 | 4 | 145 | 13 | 148 | 2.63e-33 | 119 |
MS.gene88214.t1 | AT3G03200 | 45.455 | 132 | 68 | 3 | 4 | 135 | 5 | 132 | 3.76e-33 | 122 |
MS.gene88214.t1 | AT1G32770 | 45.865 | 133 | 63 | 4 | 6 | 135 | 17 | 143 | 3.94e-33 | 120 |
MS.gene88214.t1 | AT3G49530 | 41.176 | 136 | 77 | 2 | 3 | 138 | 11 | 143 | 4.51e-33 | 120 |
MS.gene88214.t1 | AT1G61110 | 43.836 | 146 | 72 | 4 | 5 | 148 | 16 | 153 | 6.12e-33 | 119 |
MS.gene88214.t1 | AT5G61430 | 45.038 | 131 | 66 | 3 | 5 | 135 | 16 | 140 | 6.64e-33 | 119 |
MS.gene88214.t1 | AT3G10490 | 41.844 | 141 | 78 | 3 | 4 | 144 | 26 | 162 | 6.76e-33 | 117 |
MS.gene88214.t1 | AT3G49530 | 41.176 | 136 | 77 | 2 | 3 | 138 | 11 | 143 | 7.79e-33 | 121 |
MS.gene88214.t1 | AT4G10350 | 45.865 | 133 | 63 | 4 | 6 | 135 | 10 | 136 | 1.55e-32 | 118 |
MS.gene88214.t1 | AT5G53950 | 47.368 | 133 | 62 | 4 | 5 | 135 | 17 | 143 | 2.07e-32 | 118 |
MS.gene88214.t1 | AT3G10480 | 41.096 | 146 | 82 | 3 | 4 | 149 | 26 | 167 | 2.59e-32 | 119 |
MS.gene88214.t1 | AT3G10480 | 40.541 | 148 | 84 | 3 | 4 | 151 | 26 | 169 | 2.92e-32 | 119 |
MS.gene88214.t1 | AT3G15170 | 44.444 | 135 | 69 | 3 | 2 | 135 | 17 | 146 | 3.18e-32 | 117 |
MS.gene88214.t1 | AT3G04070 | 43.478 | 138 | 65 | 4 | 4 | 135 | 9 | 139 | 4.37e-32 | 117 |
MS.gene88214.t1 | AT1G77450 | 44.928 | 138 | 65 | 4 | 5 | 140 | 10 | 138 | 4.45e-32 | 115 |
MS.gene88214.t1 | AT1G33280 | 44.615 | 130 | 69 | 3 | 6 | 135 | 9 | 135 | 5.23e-32 | 116 |
MS.gene88214.t1 | AT5G08790 | 44.828 | 145 | 71 | 4 | 2 | 145 | 4 | 140 | 6.08e-32 | 115 |
MS.gene88214.t1 | AT3G04070 | 43.478 | 138 | 65 | 4 | 4 | 135 | 9 | 139 | 6.55e-32 | 117 |
MS.gene88214.t1 | AT3G29035 | 44.521 | 146 | 70 | 5 | 5 | 146 | 24 | 162 | 7.07e-32 | 116 |
MS.gene88214.t1 | AT1G56010 | 42.963 | 135 | 72 | 3 | 1 | 135 | 15 | 144 | 1.82e-31 | 115 |
MS.gene88214.t1 | AT1G54330 | 42.143 | 140 | 77 | 3 | 4 | 143 | 5 | 140 | 2.53e-31 | 114 |
MS.gene88214.t1 | AT3G10490 | 41.844 | 141 | 78 | 3 | 4 | 144 | 26 | 162 | 3.89e-31 | 116 |
MS.gene88214.t1 | AT3G12910 | 48.872 | 133 | 58 | 5 | 7 | 135 | 23 | 149 | 9.79e-31 | 112 |
MS.gene88214.t1 | AT5G63790 | 42.361 | 144 | 76 | 3 | 2 | 145 | 47 | 183 | 1.03e-30 | 112 |
MS.gene88214.t1 | AT5G39610 | 44.275 | 131 | 67 | 3 | 5 | 135 | 20 | 144 | 1.22e-30 | 112 |
MS.gene88214.t1 | AT5G63790 | 42.361 | 144 | 76 | 3 | 2 | 145 | 57 | 193 | 1.22e-30 | 112 |
MS.gene88214.t1 | AT5G07680 | 42.748 | 131 | 69 | 3 | 5 | 135 | 3 | 127 | 2.24e-30 | 112 |
MS.gene88214.t1 | AT3G44290 | 43.284 | 134 | 71 | 4 | 7 | 140 | 16 | 144 | 2.43e-30 | 110 |
MS.gene88214.t1 | AT5G07680 | 42.748 | 131 | 69 | 3 | 5 | 135 | 17 | 141 | 2.63e-30 | 112 |
MS.gene88214.t1 | AT5G13180 | 46.212 | 132 | 62 | 4 | 5 | 135 | 14 | 137 | 2.98e-30 | 110 |
MS.gene88214.t1 | AT3G15510 | 44.056 | 143 | 68 | 5 | 9 | 148 | 21 | 154 | 3.22e-30 | 112 |
MS.gene88214.t1 | AT5G04395 | 41.096 | 146 | 72 | 5 | 2 | 135 | 25 | 168 | 3.24e-30 | 108 |
MS.gene88214.t1 | AT5G18270 | 41.667 | 132 | 70 | 3 | 5 | 135 | 21 | 146 | 4.53e-30 | 111 |
MS.gene88214.t1 | AT5G18270 | 41.667 | 132 | 70 | 3 | 5 | 135 | 21 | 146 | 8.77e-30 | 110 |
MS.gene88214.t1 | AT3G12977 | 40.441 | 136 | 73 | 4 | 1 | 135 | 14 | 142 | 9.26e-30 | 109 |
MS.gene88214.t1 | AT1G34180 | 43.750 | 128 | 68 | 3 | 7 | 134 | 18 | 141 | 1.10e-29 | 112 |
MS.gene88214.t1 | AT3G10500 | 41.481 | 135 | 75 | 3 | 4 | 138 | 8 | 138 | 1.34e-29 | 113 |
MS.gene88214.t1 | AT1G32510 | 40.714 | 140 | 74 | 4 | 5 | 138 | 6 | 142 | 1.35e-29 | 109 |
MS.gene88214.t1 | AT1G34180 | 43.750 | 128 | 68 | 3 | 7 | 134 | 18 | 141 | 1.96e-29 | 112 |
MS.gene88214.t1 | AT3G04060 | 41.045 | 134 | 68 | 3 | 5 | 135 | 20 | 145 | 2.09e-29 | 110 |
MS.gene88214.t1 | AT3G44290 | 43.284 | 134 | 71 | 4 | 7 | 140 | 16 | 144 | 2.12e-29 | 110 |
MS.gene88214.t1 | AT5G22290 | 43.511 | 131 | 69 | 4 | 4 | 134 | 20 | 145 | 5.59e-29 | 108 |
MS.gene88214.t1 | AT2G33480 | 41.727 | 139 | 72 | 3 | 5 | 143 | 15 | 144 | 6.22e-29 | 107 |
MS.gene88214.t1 | AT2G33480 | 41.727 | 139 | 72 | 3 | 5 | 143 | 15 | 144 | 6.41e-29 | 107 |
MS.gene88214.t1 | AT1G34190 | 42.969 | 128 | 69 | 3 | 7 | 134 | 18 | 141 | 1.31e-28 | 110 |
MS.gene88214.t1 | AT5G04410 | 42.424 | 132 | 72 | 3 | 4 | 135 | 8 | 135 | 1.61e-28 | 110 |
MS.gene88214.t1 | AT4G28530 | 38.816 | 152 | 63 | 4 | 5 | 135 | 10 | 152 | 1.83e-28 | 107 |
MS.gene88214.t1 | AT2G27300 | 42.188 | 128 | 69 | 3 | 7 | 134 | 16 | 138 | 2.73e-28 | 107 |
MS.gene88214.t1 | AT5G09330 | 43.411 | 129 | 69 | 3 | 7 | 135 | 8 | 132 | 4.98e-28 | 108 |
MS.gene88214.t1 | AT5G09330 | 43.411 | 129 | 69 | 3 | 7 | 135 | 8 | 132 | 4.98e-28 | 108 |
MS.gene88214.t1 | AT5G09330 | 43.411 | 129 | 69 | 3 | 7 | 135 | 8 | 132 | 4.98e-28 | 108 |
MS.gene88214.t1 | AT5G09330 | 43.411 | 129 | 69 | 3 | 7 | 135 | 8 | 132 | 4.98e-28 | 108 |
MS.gene88214.t1 | AT5G09330 | 43.411 | 129 | 69 | 3 | 7 | 135 | 8 | 132 | 4.98e-28 | 108 |
MS.gene88214.t1 | AT3G10480 | 35.393 | 178 | 80 | 4 | 4 | 149 | 26 | 200 | 1.38e-27 | 107 |
MS.gene88214.t1 | AT2G43000 | 41.085 | 129 | 70 | 3 | 7 | 135 | 20 | 142 | 3.36e-27 | 102 |
MS.gene88214.t1 | AT1G34180 | 39.855 | 138 | 71 | 3 | 7 | 134 | 18 | 153 | 4.15e-27 | 105 |
MS.gene88214.t1 | AT1G34180 | 39.855 | 138 | 71 | 3 | 7 | 134 | 18 | 153 | 6.58e-27 | 105 |
MS.gene88214.t1 | AT5G64060 | 40.602 | 133 | 67 | 4 | 7 | 135 | 8 | 132 | 9.23e-27 | 103 |
MS.gene88214.t1 | AT4G01550 | 40.769 | 130 | 73 | 2 | 8 | 135 | 7 | 134 | 2.27e-26 | 103 |
MS.gene88214.t1 | AT3G04420 | 38.462 | 143 | 84 | 3 | 6 | 147 | 4 | 143 | 1.33e-24 | 96.7 |
MS.gene88214.t1 | AT3G04420 | 40.152 | 132 | 75 | 3 | 6 | 136 | 4 | 132 | 1.99e-24 | 97.1 |
MS.gene88214.t1 | AT4G01520 | 40.602 | 133 | 74 | 4 | 6 | 135 | 5 | 135 | 2.56e-24 | 95.9 |
MS.gene88214.t1 | AT4G01540 | 41.221 | 131 | 72 | 4 | 8 | 135 | 7 | 135 | 3.73e-23 | 94.0 |
MS.gene88214.t1 | AT1G52880 | 43.939 | 132 | 62 | 4 | 9 | 135 | 21 | 145 | 3.82e-23 | 93.2 |
MS.gene88214.t1 | AT4G01540 | 41.221 | 131 | 72 | 4 | 8 | 135 | 7 | 135 | 5.38e-23 | 94.0 |
MS.gene88214.t1 | AT4G01540 | 41.221 | 131 | 72 | 4 | 8 | 135 | 7 | 135 | 5.81e-23 | 94.0 |
MS.gene88214.t1 | AT1G32870 | 41.538 | 130 | 70 | 4 | 5 | 134 | 10 | 133 | 6.25e-23 | 94.4 |
MS.gene88214.t1 | AT4G01540 | 41.221 | 131 | 72 | 4 | 8 | 135 | 7 | 135 | 6.99e-23 | 94.0 |
MS.gene88214.t1 | AT1G32870 | 41.538 | 130 | 70 | 4 | 5 | 134 | 10 | 133 | 7.77e-23 | 94.0 |
MS.gene88214.t1 | AT1G02230 | 38.686 | 137 | 76 | 4 | 6 | 139 | 4 | 135 | 8.05e-23 | 92.8 |
MS.gene88214.t1 | AT1G32870 | 41.538 | 130 | 70 | 4 | 5 | 134 | 46 | 169 | 8.53e-23 | 94.0 |
MS.gene88214.t1 | AT1G02250 | 38.060 | 134 | 75 | 4 | 6 | 136 | 4 | 132 | 1.40e-22 | 92.0 |
MS.gene88214.t1 | AT5G64530 | 39.695 | 131 | 61 | 7 | 5 | 134 | 3 | 116 | 9.26e-20 | 80.9 |
MS.gene88214.t1 | AT5G64530 | 39.394 | 132 | 60 | 6 | 5 | 134 | 3 | 116 | 1.61e-19 | 80.9 |
MS.gene88214.t1 | AT3G12977 | 44.304 | 79 | 43 | 1 | 57 | 135 | 12 | 89 | 4.18e-18 | 78.2 |
MS.gene88214.t1 | AT1G56010 | 48.611 | 72 | 36 | 1 | 64 | 135 | 7 | 77 | 1.04e-17 | 77.4 |
MS.gene88214.t1 | AT1G01010 | 34.965 | 143 | 79 | 5 | 1 | 135 | 1 | 137 | 1.28e-17 | 79.0 |
MS.gene88214.t1 | AT1G02220 | 35.115 | 131 | 78 | 4 | 6 | 135 | 4 | 128 | 2.37e-17 | 78.2 |
MS.gene88214.t1 | AT4G10350 | 49.315 | 73 | 36 | 1 | 63 | 135 | 18 | 89 | 2.40e-17 | 77.0 |
MS.gene88214.t1 | AT5G61430 | 43.590 | 78 | 43 | 1 | 58 | 135 | 1 | 77 | 3.13e-17 | 76.6 |
MS.gene88214.t1 | AT4G28530 | 38.739 | 111 | 39 | 3 | 5 | 95 | 10 | 111 | 5.19e-17 | 76.6 |
MS.gene88214.t1 | AT2G33480 | 41.975 | 81 | 46 | 1 | 63 | 143 | 8 | 87 | 1.46e-15 | 71.2 |
MS.gene88214.t1 | AT3G04430 | 36.364 | 110 | 66 | 2 | 11 | 120 | 6 | 111 | 2.09e-15 | 70.5 |
MS.gene88214.t1 | AT5G50820 | 31.613 | 155 | 90 | 5 | 5 | 156 | 17 | 158 | 9.22e-15 | 68.6 |
MS.gene88214.t1 | AT3G56530 | 31.818 | 132 | 85 | 5 | 4 | 134 | 51 | 178 | 7.31e-13 | 65.1 |
MS.gene88214.t1 | AT2G18060 | 47.059 | 68 | 31 | 2 | 88 | 155 | 2 | 64 | 1.46e-12 | 63.9 |
MS.gene88214.t1 | AT5G14000 | 31.061 | 132 | 81 | 5 | 5 | 134 | 15 | 138 | 2.46e-12 | 61.2 |
MS.gene88214.t1 | AT3G10490 | 45.161 | 62 | 33 | 1 | 83 | 144 | 2 | 62 | 4.78e-12 | 62.8 |
MS.gene88214.t1 | AT3G10490 | 45.161 | 62 | 33 | 1 | 83 | 144 | 2 | 62 | 4.78e-12 | 62.8 |
MS.gene88214.t1 | AT5G14000 | 30.303 | 132 | 82 | 4 | 5 | 134 | 15 | 138 | 8.50e-12 | 60.8 |
MS.gene88214.t1 | AT2G43000 | 50.909 | 55 | 26 | 1 | 81 | 135 | 11 | 64 | 8.41e-11 | 58.2 |
Find 48 sgRNAs with CRISPR-Local
Find 112 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTCGGATAACAAAGTTAT+TGG | 0.171109 | 4.4:+49691149 | MS.gene88214:CDS |
CTTCGGATAACAAAGTTATT+GGG | 0.268350 | 4.4:+49691150 | MS.gene88214:CDS |
AAAACCATGGTGTTCTATAA+AGG | 0.328853 | 4.4:+49691179 | MS.gene88214:CDS |
TCCTGGTTATGTTTATTCTT+CGG | 0.357166 | 4.4:+49691133 | MS.gene88214:CDS |
GAACTACTGCTTGTGGGTAT+TGG | 0.373733 | 4.4:+49691096 | MS.gene88214:CDS |
CCACAAGCAGTAGTTCTATT+AGG | 0.380796 | 4.4:-49691089 | None:intergenic |
CAAGTGGAAGGAAAACAAAA+TGG | 0.388513 | 4.4:+49691210 | MS.gene88214:CDS |
GCCAAACAAGTGCTATAGAT+AGG | 0.402516 | 4.4:+49690705 | MS.gene88214:CDS |
ACCATTGCTCTTTATCTTCG+CGG | 0.411304 | 4.4:-49691022 | None:intergenic |
CCCTATCTATAGCACTTGTT+TGG | 0.413662 | 4.4:-49690706 | None:intergenic |
CTTGCTTCTCTCTCTTGACC+TGG | 0.421832 | 4.4:-49691056 | None:intergenic |
TGTGGGTATTGGAAGGCAAC+AGG | 0.456765 | 4.4:+49691107 | MS.gene88214:CDS |
ATTCCAGTCATTGACATCAA+TGG | 0.463355 | 4.4:+49690731 | MS.gene88214:CDS |
TATCTAAATAATAAATTACA+AGG | 0.468522 | 4.4:+49690683 | MS.gene88214:CDS |
TACTTACTTGGGAGGTTCCA+TGG | 0.472632 | 4.4:-49690761 | None:intergenic |
CTAACAAGCTCTTCTTCAGT+TGG | 0.487944 | 4.4:-49690656 | None:intergenic |
TAACAAGCTCTTCTTCAGTT+GGG | 0.488303 | 4.4:-49690655 | None:intergenic |
TGGAAGGCAACAGGTTCTCC+TGG | 0.494297 | 4.4:+49691116 | MS.gene88214:CDS |
CTAATAGAACTACTGCTTGT+GGG | 0.501976 | 4.4:+49691090 | MS.gene88214:CDS |
AGGTCAAGAGAGAGAAGCAA+GGG | 0.520943 | 4.4:+49691058 | MS.gene88214:CDS |
GAGGTGTGGCAGTGTTGGAT+TGG | 0.521829 | 4.4:-49691268 | None:intergenic |
GGATTGGTTAGATACTTGAA+TGG | 0.527741 | 4.4:-49691252 | None:intergenic |
CCAAACAAGTGCTATAGATA+GGG | 0.540158 | 4.4:+49690706 | MS.gene88214:CDS |
AAGAGAGAGAAGCAAGGGGA+GGG | 0.540485 | 4.4:+49691063 | MS.gene88214:CDS |
TATTAATGTACTTACTTGGG+AGG | 0.544087 | 4.4:-49690769 | None:intergenic |
TACCTGAGGTGTGGCAGTGT+TGG | 0.546731 | 4.4:-49691273 | None:intergenic |
ACACCATTGATGTCAATGAC+TGG | 0.555788 | 4.4:-49690734 | None:intergenic |
ACTTGACGGGGTCTTACTTG+AGG | 0.559202 | 4.4:-49692291 | None:intergenic |
ATCCAACACTGCCACACCTC+AGG | 0.560321 | 4.4:+49691271 | MS.gene88214:CDS |
TTCGGATAACAAAGTTATTG+GGG | 0.568678 | 4.4:+49691151 | MS.gene88214:CDS |
CAAGAGAGAGAAGCAAGGGG+AGG | 0.575212 | 4.4:+49691062 | MS.gene88214:CDS |
AAGGAAAAGCTCCAAGTGGA+AGG | 0.577529 | 4.4:+49691198 | MS.gene88214:CDS |
CCTAATAGAACTACTGCTTG+TGG | 0.583756 | 4.4:+49691089 | MS.gene88214:CDS |
ATGGAAGATACCTTCCCACC+TGG | 0.589454 | 4.4:+49690620 | MS.gene88214:CDS |
TCCGAAGAATAAACATAACC+AGG | 0.594367 | 4.4:-49691134 | None:intergenic |
TACTGCTTGTGGGTATTGGA+AGG | 0.594408 | 4.4:+49691100 | MS.gene88214:CDS |
GAAACGAAAACCAGGTGGGA+AGG | 0.608858 | 4.4:-49690630 | None:intergenic |
GCCGCGAAGATAAAGAGCAA+TGG | 0.609204 | 4.4:+49691021 | MS.gene88214:CDS |
AATTAACTCCAGCTCATGGT+GGG | 0.619610 | 4.4:+49692266 | MS.gene88214:intron |
CAGGTCAAGAGAGAGAAGCA+AGG | 0.633366 | 4.4:+49691057 | MS.gene88214:CDS |
ACATCAATGGTGTAGAACCA+TGG | 0.640791 | 4.4:+49690744 | MS.gene88214:CDS |
GTTGGGAAGAAACGAAAACC+AGG | 0.640908 | 4.4:-49690638 | None:intergenic |
TAATTAACTCCAGCTCATGG+TGG | 0.645643 | 4.4:+49692265 | MS.gene88214:intron |
TATAAAGGAAAAGCTCCAAG+TGG | 0.670306 | 4.4:+49691194 | MS.gene88214:CDS |
GGTCAAGAGAGAGAAGCAAG+GGG | 0.681277 | 4.4:+49691059 | MS.gene88214:CDS |
GGGAAGAAACGAAAACCAGG+TGG | 0.697514 | 4.4:-49690635 | None:intergenic |
GGAAGAAACGAAAACCAGGT+GGG | 0.702147 | 4.4:-49690634 | None:intergenic |
TGCAATATATACCTGAGGTG+TGG | 0.718087 | 4.4:-49691282 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATCTAAATAATAAATTACA+AGG | + | chr4.4:49690683-49690702 | MS.gene88214:CDS | 10.0% |
!!! | AAAATTTTCAAAAACAAAAA+AGG | + | chr4.4:49691687-49691706 | MS.gene88214:intron | 10.0% |
!!! | AAATCTTATTTAATCAATTA+TGG | - | chr4.4:49691597-49691616 | None:intergenic | 10.0% |
!!! | TATACTATTGTTTTATTTAT+AGG | - | chr4.4:49691480-49691499 | None:intergenic | 10.0% |
!! | AAACTGAAAATTAACATATA+TGG | + | chr4.4:49691420-49691439 | MS.gene88214:intron | 15.0% |
!! | AATAGTAACAATGAAAATAA+TGG | + | chr4.4:49692181-49692200 | MS.gene88214:intron | 15.0% |
!! | TAATAATTAAGGTATACAAT+AGG | + | chr4.4:49691330-49691349 | MS.gene88214:intron | 15.0% |
!! | TTATATTAATGTACTTACTT+GGG | - | chr4.4:49690775-49690794 | None:intergenic | 15.0% |
!! | TTTATATTAATGTACTTACT+TGG | - | chr4.4:49690776-49690795 | None:intergenic | 15.0% |
!!! | AACTTTTAACTTATGTTTTT+TGG | + | chr4.4:49691896-49691915 | MS.gene88214:intron | 15.0% |
!! | AATCATCAAACTATGTAAAT+CGG | - | chr4.4:49690961-49690980 | None:intergenic | 20.0% |
!! | TTGTCTATAAAAGAAAGAAA+TGG | - | chr4.4:49690828-49690847 | None:intergenic | 20.0% |
!!! | ATTTGAAATTTCTCAATTAG+GGG | + | chr4.4:49692093-49692112 | MS.gene88214:intron | 20.0% |
!!! | CATTTGAAATTTCTCAATTA+GGG | + | chr4.4:49692092-49692111 | MS.gene88214:intron | 20.0% |
!!! | CTTGTATGAATTTCATTTTA+AGG | - | chr4.4:49691448-49691467 | None:intergenic | 20.0% |
!!! | TAAAAAAAGTATTAACCATG+AGG | - | chr4.4:49690894-49690913 | None:intergenic | 20.0% |
!!! | TCATTTGAAATTTCTCAATT+AGG | + | chr4.4:49692091-49692110 | MS.gene88214:intron | 20.0% |
!!! | TTTATAGACAAACTTTTACT+AGG | + | chr4.4:49690837-49690856 | MS.gene88214:intron | 20.0% |
! | ACATAGTATGAATGACATTT+AGG | + | chr4.4:49691618-49691637 | MS.gene88214:intron | 25.0% |
! | CATAGTATGAATGACATTTA+GGG | + | chr4.4:49691619-49691638 | MS.gene88214:intron | 25.0% |
! | TCGTCATGATGTAATAATTA+AGG | + | chr4.4:49691319-49691338 | MS.gene88214:intron | 25.0% |
!! | TTTGAAATTTCTCAATTAGG+GGG | + | chr4.4:49692094-49692113 | MS.gene88214:intron | 25.0% |
!! | TTTTATGACCAACAAATACT+TGG | + | chr4.4:49691503-49691522 | MS.gene88214:intron | 25.0% |
!!! | TTTGTTGTTATCTAGCTTAA+AGG | - | chr4.4:49691814-49691833 | None:intergenic | 25.0% |
!!! | TTTTTGGTGTTTTATAGTTG+AGG | + | chr4.4:49691912-49691931 | MS.gene88214:intron | 25.0% |
AAAACCATGGTGTTCTATAA+AGG | + | chr4.4:49691179-49691198 | MS.gene88214:CDS | 30.0% | |
AAAAGGAAAAAACAGTTGAG+AGG | + | chr4.4:49691704-49691723 | MS.gene88214:intron | 30.0% | |
AATGATGCAATATATACCTG+AGG | - | chr4.4:49691290-49691309 | None:intergenic | 30.0% | |
CTTCGGATAACAAAGTTATT+GGG | + | chr4.4:49691150-49691169 | MS.gene88214:CDS | 30.0% | |
GAGATTGATCAAAATCCATT+TGG | + | chr4.4:49692037-49692056 | MS.gene88214:intron | 30.0% | |
TATTAATGTACTTACTTGGG+AGG | - | chr4.4:49690772-49690791 | None:intergenic | 30.0% | |
TCAATTCCAAGAATCACTAT+GGG | + | chr4.4:49692213-49692232 | MS.gene88214:intron | 30.0% | |
TCCTGGTTATGTTTATTCTT+CGG | + | chr4.4:49691133-49691152 | MS.gene88214:CDS | 30.0% | |
TCTTCGGATAACAAAGTTAT+TGG | + | chr4.4:49691149-49691168 | MS.gene88214:CDS | 30.0% | |
TTCAATTCCAAGAATCACTA+TGG | + | chr4.4:49692212-49692231 | MS.gene88214:intron | 30.0% | |
TTCGGATAACAAAGTTATTG+GGG | + | chr4.4:49691151-49691170 | MS.gene88214:CDS | 30.0% | |
! | AGAAAGAGTTGATCAATTAC+GGG | + | chr4.4:49692009-49692028 | MS.gene88214:intron | 30.0% |
! | CAATGAAAATAATGGTGATG+AGG | + | chr4.4:49692189-49692208 | MS.gene88214:intron | 30.0% |
! | CTTTTGATCCAAGTATTTGT+TGG | - | chr4.4:49691514-49691533 | None:intergenic | 30.0% |
! | GACAAACTTTTACTAGGTTA+TGG | + | chr4.4:49690843-49690862 | MS.gene88214:intron | 30.0% |
! | GAGAAAGAGTTGATCAATTA+CGG | + | chr4.4:49692008-49692027 | MS.gene88214:intron | 30.0% |
! | TTTTCCTTTATAGAACACCA+TGG | - | chr4.4:49691186-49691205 | None:intergenic | 30.0% |
AAGTAATCATATGCCACTAG+AGG | + | chr4.4:49692123-49692142 | MS.gene88214:intron | 35.0% | |
ATTCCAGTCATTGACATCAA+TGG | + | chr4.4:49690731-49690750 | MS.gene88214:CDS | 35.0% | |
CAAGTGGAAGGAAAACAAAA+TGG | + | chr4.4:49691210-49691229 | MS.gene88214:CDS | 35.0% | |
CCAAACAAGTGCTATAGATA+GGG | + | chr4.4:49690706-49690725 | MS.gene88214:CDS | 35.0% | |
CTAATAGAACTACTGCTTGT+GGG | + | chr4.4:49691090-49691109 | MS.gene88214:CDS | 35.0% | |
CTAGTGGCATATGATTACTT+TGG | - | chr4.4:49692123-49692142 | None:intergenic | 35.0% | |
GAGGTTCAAATAGCACAAAT+TGG | + | chr4.4:49692152-49692171 | MS.gene88214:intron | 35.0% | |
GTGTCGAGTGTATGTAATAT+CGG | + | chr4.4:49691949-49691968 | MS.gene88214:intron | 35.0% | |
TAACAAGCTCTTCTTCAGTT+GGG | - | chr4.4:49690658-49690677 | None:intergenic | 35.0% | |
TATAAAGGAAAAGCTCCAAG+TGG | + | chr4.4:49691194-49691213 | MS.gene88214:CDS | 35.0% | |
TATTGGGGTGAAAAAAACCA+TGG | + | chr4.4:49691166-49691185 | MS.gene88214:CDS | 35.0% | |
TCAACTCTTTCTCTCTCTAA+TGG | - | chr4.4:49692001-49692020 | None:intergenic | 35.0% | |
TCCGAAGAATAAACATAACC+AGG | - | chr4.4:49691137-49691156 | None:intergenic | 35.0% | |
TGTCGAGTGTATGTAATATC+GGG | + | chr4.4:49691950-49691969 | MS.gene88214:intron | 35.0% | |
! | CAATGGTTTTTCTTTTCACC+AGG | + | chr4.4:49691038-49691057 | MS.gene88214:CDS | 35.0% |
! | GAGGAGTTTTCAAATCAAGT+AGG | + | chr4.4:49691723-49691742 | MS.gene88214:intron | 35.0% |
!! | GGATTGGTTAGATACTTGAA+TGG | - | chr4.4:49691255-49691274 | None:intergenic | 35.0% |
!! | GGGACAGTGAACATTTTAAT+TGG | + | chr4.4:49692239-49692258 | MS.gene88214:intron | 35.0% |
!!! | CATTTTGTTTTCCTTCCACT+TGG | - | chr4.4:49691212-49691231 | None:intergenic | 35.0% |
AATTAACTCCAGCTCATGGT+GGG | + | chr4.4:49692266-49692285 | MS.gene88214:intron | 40.0% | |
ACACCATTGATGTCAATGAC+TGG | - | chr4.4:49690737-49690756 | None:intergenic | 40.0% | |
ACATCAATGGTGTAGAACCA+TGG | + | chr4.4:49690744-49690763 | MS.gene88214:CDS | 40.0% | |
ACCATGAGCTGGAGTTAATT+AGG | - | chr4.4:49692266-49692285 | None:intergenic | 40.0% | |
ACCATTGCTCTTTATCTTCG+CGG | - | chr4.4:49691025-49691044 | None:intergenic | 40.0% | |
CCAAGAATCACTATGGGAAT+GGG | + | chr4.4:49692219-49692238 | MS.gene88214:intron | 40.0% | |
CCCTATCTATAGCACTTGTT+TGG | - | chr4.4:49690709-49690728 | None:intergenic | 40.0% | |
CCTAATAGAACTACTGCTTG+TGG | + | chr4.4:49691089-49691108 | MS.gene88214:CDS | 40.0% | |
CTAACAAGCTCTTCTTCAGT+TGG | - | chr4.4:49690659-49690678 | None:intergenic | 40.0% | |
GCCAAACAAGTGCTATAGAT+AGG | + | chr4.4:49690705-49690724 | MS.gene88214:CDS | 40.0% | |
TAATTAACTCCAGCTCATGG+TGG | + | chr4.4:49692265-49692284 | MS.gene88214:intron | 40.0% | |
TATGTTCCAAGCAGACAACT+CGG | - | chr4.4:49690935-49690954 | None:intergenic | 40.0% | |
TCCAAGAATCACTATGGGAA+TGG | + | chr4.4:49692218-49692237 | MS.gene88214:intron | 40.0% | |
TCCTAATTAACTCCAGCTCA+TGG | + | chr4.4:49692262-49692281 | MS.gene88214:intron | 40.0% | |
TGCAATATATACCTGAGGTG+TGG | - | chr4.4:49691285-49691304 | None:intergenic | 40.0% | |
! | CCACAAGCAGTAGTTCTATT+AGG | - | chr4.4:49691092-49691111 | None:intergenic | 40.0% |
!! | ATGTGTTTTTGCAGCTCTTG+CGG | + | chr4.4:49690989-49691008 | MS.gene88214:intron | 40.0% |
AAGGAAAAGCTCCAAGTGGA+AGG | + | chr4.4:49691198-49691217 | MS.gene88214:CDS | 45.0% | |
AGGTCAAGAGAGAGAAGCAA+GGG | + | chr4.4:49691058-49691077 | MS.gene88214:CDS | 45.0% | |
CATATGCCACTAGAGGTTGT+AGG | + | chr4.4:49692130-49692149 | MS.gene88214:intron | 45.0% | |
CCCATTCCCATAGTGATTCT+TGG | - | chr4.4:49692222-49692241 | None:intergenic | 45.0% | |
GAACTACTGCTTGTGGGTAT+TGG | + | chr4.4:49691096-49691115 | MS.gene88214:CDS | 45.0% | |
GGAAGAAACGAAAACCAGGT+GGG | - | chr4.4:49690637-49690656 | None:intergenic | 45.0% | |
GTTGGGAAGAAACGAAAACC+AGG | - | chr4.4:49690641-49690660 | None:intergenic | 45.0% | |
TACTTACTTGGGAGGTTCCA+TGG | - | chr4.4:49690764-49690783 | None:intergenic | 45.0% | |
TGAGTAGATGTGGCACCAAA+TGG | - | chr4.4:49692055-49692074 | None:intergenic | 45.0% | |
TGCATCCTGATGAGTAGATG+TGG | - | chr4.4:49692065-49692084 | None:intergenic | 45.0% | |
!! | CAGACAACTCGGTTGATGAA+CGG | - | chr4.4:49690924-49690943 | None:intergenic | 45.0% |
!! | TACTGCTTGTGGGTATTGGA+AGG | + | chr4.4:49691100-49691119 | MS.gene88214:CDS | 45.0% |
!! | TGTGTTTTTGCAGCTCTTGC+GGG | + | chr4.4:49690990-49691009 | MS.gene88214:intron | 45.0% |
AAGAGAGAGAAGCAAGGGGA+GGG | + | chr4.4:49691063-49691082 | MS.gene88214:CDS | 50.0% | |
ATGCCACTAGAGGTTGTAGG+AGG | + | chr4.4:49692133-49692152 | MS.gene88214:intron | 50.0% | |
ATGGAAGATACCTTCCCACC+TGG | + | chr4.4:49690620-49690639 | MS.gene88214:CDS | 50.0% | |
CAGGTCAAGAGAGAGAAGCA+AGG | + | chr4.4:49691057-49691076 | MS.gene88214:CDS | 50.0% | |
CATCAACCGAGTTGTCTGCT+TGG | + | chr4.4:49690926-49690945 | MS.gene88214:intron | 50.0% | |
CTTGCTTCTCTCTCTTGACC+TGG | - | chr4.4:49691059-49691078 | None:intergenic | 50.0% | |
GAAACGAAAACCAGGTGGGA+AGG | - | chr4.4:49690633-49690652 | None:intergenic | 50.0% | |
GAACCTCCTACAACCTCTAG+TGG | - | chr4.4:49692139-49692158 | None:intergenic | 50.0% | |
GAGTTCGAACTCTGACCTCA+TGG | + | chr4.4:49690876-49690895 | MS.gene88214:intron | 50.0% | |
GCCGCGAAGATAAAGAGCAA+TGG | + | chr4.4:49691021-49691040 | MS.gene88214:CDS | 50.0% | |
GGGAAGAAACGAAAACCAGG+TGG | - | chr4.4:49690638-49690657 | None:intergenic | 50.0% | |
GGTCAAGAGAGAGAAGCAAG+GGG | + | chr4.4:49691059-49691078 | MS.gene88214:CDS | 50.0% | |
TGAGGTCAGAGTTCGAACTC+TGG | - | chr4.4:49690876-49690895 | None:intergenic | 50.0% | |
!! | TGGTGCCACATCTACTCATC+AGG | + | chr4.4:49692057-49692076 | MS.gene88214:intron | 50.0% |
!! | TGTGGGTATTGGAAGGCAAC+AGG | + | chr4.4:49691107-49691126 | MS.gene88214:CDS | 50.0% |
ATCCAACACTGCCACACCTC+AGG | + | chr4.4:49691271-49691290 | MS.gene88214:CDS | 55.0% | |
CAAGAGAGAGAAGCAAGGGG+AGG | + | chr4.4:49691062-49691081 | MS.gene88214:CDS | 55.0% | |
TACCTGAGGTGTGGCAGTGT+TGG | - | chr4.4:49691276-49691295 | None:intergenic | 55.0% | |
TGGAAGGCAACAGGTTCTCC+TGG | + | chr4.4:49691116-49691135 | MS.gene88214:CDS | 55.0% | |
TTGAGGATCCCACCATGAGC+TGG | - | chr4.4:49692277-49692296 | None:intergenic | 55.0% | |
! | GAGGTGTGGCAGTGTTGGAT+TGG | - | chr4.4:49691271-49691290 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 49690620 | 49692300 | 49690620 | ID=MS.gene88214 |
chr4.4 | mRNA | 49690620 | 49692300 | 49690620 | ID=MS.gene88214.t1;Parent=MS.gene88214 |
chr4.4 | exon | 49690620 | 49690776 | 49690620 | ID=MS.gene88214.t1.exon1;Parent=MS.gene88214.t1 |
chr4.4 | CDS | 49690620 | 49690776 | 49690620 | ID=cds.MS.gene88214.t1;Parent=MS.gene88214.t1 |
chr4.4 | exon | 49691003 | 49691292 | 49691003 | ID=MS.gene88214.t1.exon2;Parent=MS.gene88214.t1 |
chr4.4 | CDS | 49691003 | 49691292 | 49691003 | ID=cds.MS.gene88214.t1;Parent=MS.gene88214.t1 |
chr4.4 | exon | 49691640 | 49691640 | 49691640 | ID=MS.gene88214.t1.exon3;Parent=MS.gene88214.t1 |
chr4.4 | CDS | 49691640 | 49691640 | 49691640 | ID=cds.MS.gene88214.t1;Parent=MS.gene88214.t1 |
chr4.4 | exon | 49692278 | 49692300 | 49692278 | ID=MS.gene88214.t1.exon4;Parent=MS.gene88214.t1 |
chr4.4 | CDS | 49692278 | 49692300 | 49692278 | ID=cds.MS.gene88214.t1;Parent=MS.gene88214.t1 |
Gene Sequence |
Protein sequence |