AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene88705

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene88705.t1 MTR_5g069030 92.332 626 40 4 1 620 1 624 0.0 1169
MS.gene88705.t1 MTR_3g093050 49.247 664 263 14 1 634 1 620 0.0 570
MS.gene88705.t1 MTR_3g093050 48.645 664 240 14 1 634 1 593 0.0 558
MS.gene88705.t1 MTR_3g093040 70.000 220 59 1 16 235 99 311 4.00e-113 342
MS.gene88705.t1 MTR_3g064580 62.500 152 56 1 25 175 6 157 1.49e-57 206
MS.gene88705.t1 MTR_6g477900 59.868 152 61 0 25 176 6 157 1.69e-57 194
MS.gene88705.t1 MTR_2g064090 52.632 190 77 3 25 208 6 188 8.91e-57 196
MS.gene88705.t1 MTR_5g076850 61.589 151 58 0 25 175 6 156 3.23e-56 202
MS.gene88705.t1 MTR_5g014300 53.254 169 69 3 25 186 6 171 1.17e-52 184
MS.gene88705.t1 MTR_3g070030 45.116 215 103 5 24 232 18 223 2.61e-52 184
MS.gene88705.t1 MTR_8g063550 51.282 156 76 0 20 175 1 156 3.39e-51 181
MS.gene88705.t1 MTR_0036s0150 38.676 287 145 8 20 305 1 257 9.65e-51 184
MS.gene88705.t1 MTR_8g063550 51.282 156 76 0 20 175 1 156 1.38e-50 182
MS.gene88705.t1 MTR_8g063550 51.282 156 76 0 20 175 1 156 1.87e-50 181
MS.gene88705.t1 MTR_2g086880 46.701 197 93 5 16 212 10 194 2.21e-50 183
MS.gene88705.t1 MTR_8g023860 54.839 155 61 4 21 172 8 156 2.76e-50 180
MS.gene88705.t1 MTR_2g086880 53.503 157 64 3 16 172 10 157 3.55e-50 184
MS.gene88705.t1 MTR_8g023840 57.616 151 55 4 25 172 11 155 1.06e-49 178
MS.gene88705.t1 MTR_4g036030 52.564 156 71 3 21 175 3 156 1.26e-49 176
MS.gene88705.t1 MTR_5g012080 52.229 157 72 3 21 175 3 158 2.74e-49 176
MS.gene88705.t1 MTR_4g098630 54.717 159 67 3 25 179 6 163 3.48e-49 174
MS.gene88705.t1 MTR_3g096140 37.970 266 134 4 28 278 10 259 4.51e-49 172
MS.gene88705.t1 MTR_1g090723 53.691 149 68 1 28 175 11 159 1.39e-48 180
MS.gene88705.t1 MTR_1g090723 54.362 149 66 2 28 175 11 158 2.42e-48 179
MS.gene88705.t1 MTR_1g090723 54.362 149 66 2 28 175 11 158 4.33e-48 179
MS.gene88705.t1 MTR_3g096140 52.703 148 70 0 28 175 10 157 6.42e-48 172
MS.gene88705.t1 MTR_4g101680 47.879 165 83 2 21 184 3 165 6.47e-48 172
MS.gene88705.t1 MTR_3g435150 45.972 211 98 4 15 211 2 210 7.85e-48 170
MS.gene88705.t1 MTR_4g108760 53.254 169 68 4 15 175 2 167 1.12e-47 171
MS.gene88705.t1 MTR_1g090720 53.459 159 68 1 25 177 42 200 1.45e-47 174
MS.gene88705.t1 MTR_1g097300 50.286 175 81 1 1 175 1 169 1.95e-47 176
MS.gene88705.t1 MTR_8g076110 49.342 152 74 2 25 175 6 155 5.03e-47 168
MS.gene88705.t1 MTR_8g093580 47.134 157 83 0 20 176 1 157 1.46e-46 172
MS.gene88705.t1 MTR_5g021710 49.068 161 79 2 25 184 8 166 1.75e-46 168
MS.gene88705.t1 MTR_4g035590 52.258 155 68 3 25 177 8 158 1.77e-46 168
MS.gene88705.t1 MTR_6g084430 52.980 151 67 2 25 175 5 151 2.18e-46 167
MS.gene88705.t1 MTR_8g467490 49.697 165 70 4 28 181 17 179 3.50e-46 168
MS.gene88705.t1 MTR_7g011130 42.995 207 95 4 10 199 8 208 3.67e-46 167
MS.gene88705.t1 MTR_2g062730 52.288 153 69 3 25 175 10 160 3.80e-46 167
MS.gene88705.t1 MTR_3g096920 49.724 181 74 6 25 200 7 175 5.27e-46 165
MS.gene88705.t1 MTR_6g012670 43.396 212 107 4 24 231 19 221 9.17e-46 165
MS.gene88705.t1 MTR_7g011120 44.385 187 91 3 24 199 7 191 1.06e-45 164
MS.gene88705.t1 MTR_4g081870 51.572 159 67 3 23 175 7 161 1.76e-45 162
MS.gene88705.t1 MTR_2g079990 49.091 165 79 2 12 176 6 165 2.11e-45 165
MS.gene88705.t1 MTR_1g096430 51.316 152 71 2 25 175 7 156 4.45e-45 164
MS.gene88705.t1 MTR_5g041940 47.826 184 78 4 24 196 2 178 9.38e-45 160
MS.gene88705.t1 MTR_6g032770 48.765 162 67 4 25 177 18 172 1.59e-44 163
MS.gene88705.t1 MTR_5g040420 47.561 164 74 4 28 181 17 178 3.19e-44 163
MS.gene88705.t1 MTR_8g023930 45.989 187 86 6 25 204 24 202 3.47e-44 165
MS.gene88705.t1 MTR_3g109340 54.248 153 65 3 25 175 22 171 5.73e-44 161
MS.gene88705.t1 MTR_3g088110 51.592 157 66 4 24 175 6 157 6.03e-44 159
MS.gene88705.t1 MTR_7g085220 46.409 181 74 4 25 188 8 182 6.37e-44 160
MS.gene88705.t1 MTR_8g094580 51.266 158 66 4 24 175 6 158 1.00e-43 158
MS.gene88705.t1 MTR_6g011860 46.552 174 81 3 12 175 2 173 1.64e-43 161
MS.gene88705.t1 MTR_3g109340 53.595 153 65 3 25 175 22 170 1.79e-43 160
MS.gene88705.t1 MTR_1g008740 46.842 190 89 5 25 211 13 193 2.35e-43 159
MS.gene88705.t1 MTR_2g064470 50.311 161 65 4 24 178 10 161 2.48e-43 158
MS.gene88705.t1 MTR_4g134460 51.678 149 67 3 28 175 57 201 2.58e-43 161
MS.gene88705.t1 MTR_1g008740 46.842 190 89 5 25 211 27 207 2.77e-43 159
MS.gene88705.t1 MTR_2g080010 46.988 166 73 3 25 177 15 178 3.61e-43 159
MS.gene88705.t1 MTR_2g078700 52.500 160 60 4 25 175 23 175 3.62e-43 159
MS.gene88705.t1 MTR_8g024480 44.944 178 86 3 17 182 7 184 4.11e-43 160
MS.gene88705.t1 MTR_3g070040 43.056 216 104 6 24 232 7 210 4.12e-43 158
MS.gene88705.t1 MTR_8g059170 50.307 163 75 3 20 179 9 168 8.44e-43 157
MS.gene88705.t1 MTR_3g096920 58.594 128 50 2 24 151 6 130 3.53e-42 155
MS.gene88705.t1 MTR_7g085260 49.693 163 64 4 25 176 17 172 5.04e-42 156
MS.gene88705.t1 MTR_2g079990 53.571 140 60 2 12 151 6 140 7.19e-42 156
MS.gene88705.t1 MTR_8g023900 47.594 187 83 6 25 200 12 194 7.90e-42 158
MS.gene88705.t1 MTR_8g023900 43.216 199 98 6 27 218 195 385 1.55e-40 154
MS.gene88705.t1 MTR_3g096140 50.370 135 67 0 41 175 2 136 3.99e-41 152
MS.gene88705.t1 MTR_4g089135 45.556 180 71 4 25 179 15 192 4.90e-41 152
MS.gene88705.t1 MTR_7g005280 51.613 155 64 4 24 175 14 160 7.65e-41 149
MS.gene88705.t1 MTR_2157s0010 47.273 165 69 5 25 175 8 168 3.13e-40 148
MS.gene88705.t1 MTR_7g100990 37.549 253 131 7 24 260 10 251 3.83e-40 150
MS.gene88705.t1 MTR_3g116070 56.154 130 52 3 25 151 23 150 7.63e-40 149
MS.gene88705.t1 MTR_1g069805 48.366 153 71 3 25 175 10 156 1.19e-38 144
MS.gene88705.t1 MTR_2g093810 44.693 179 86 6 25 196 14 186 3.26e-38 144
MS.gene88705.t1 MTR_7g097090 47.682 151 71 3 25 173 10 154 1.47e-36 139
MS.gene88705.t1 MTR_5g090970 47.500 160 70 5 28 175 21 178 2.14e-36 139
MS.gene88705.t1 MTR_3g098810 43.275 171 83 3 22 182 11 177 2.54e-36 136
MS.gene88705.t1 MTR_8g099750 42.703 185 84 5 22 197 11 182 2.98e-36 136
MS.gene88705.t1 MTR_4g075980 46.358 151 71 3 28 175 18 161 4.33e-36 137
MS.gene88705.t1 MTR_2g068880 42.697 178 81 6 16 175 12 186 7.48e-36 137
MS.gene88705.t1 MTR_2g068920 48.551 138 65 3 19 151 14 150 1.41e-35 136
MS.gene88705.t1 MTR_5g090970 45.625 160 72 5 28 175 21 177 3.47e-35 135
MS.gene88705.t1 MTR_3g098810 47.761 134 62 2 22 151 11 140 4.50e-35 130
MS.gene88705.t1 MTR_8g023880 47.059 170 59 7 25 175 7 164 2.29e-34 132
MS.gene88705.t1 MTR_4g052620 42.038 157 82 5 25 173 5 160 3.48e-31 122
MS.gene88705.t1 MTR_2g086690 41.667 156 83 5 26 173 5 160 1.64e-30 120
MS.gene88705.t1 MTR_7g105170 38.182 165 90 6 22 175 1 164 7.30e-29 116
MS.gene88705.t1 MTR_8g094580 55.000 100 36 3 82 175 8 104 1.30e-27 111
MS.gene88705.t1 MTR_7g070140 48.101 79 39 1 75 151 12 90 3.65e-19 84.7
MS.gene88705.t1 MTR_4g094302 36.434 129 70 3 25 151 11 129 6.61e-19 84.7
MS.gene88705.t1 MTR_4g094302 36.434 129 70 3 25 151 11 129 1.04e-18 85.1
MS.gene88705.t1 MTR_7g083330 36.719 128 77 3 24 150 17 141 1.02e-15 76.3
MS.gene88705.t1 MTR_8g093790 33.939 165 82 8 24 185 9 149 7.54e-14 70.9
MS.gene88705.t1 MTR_7g083360 35.433 127 78 3 25 150 10 133 7.53e-13 67.0
MS.gene88705.t1 MTR_3g096400 33.133 166 85 8 24 174 6 160 1.17e-12 67.8
MS.gene88705.t1 MTR_7g070150 42.647 68 36 1 123 190 8 72 1.37e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene88705.t1 AT4G35580 43.640 456 198 18 17 459 1 410 8.66e-97 306
MS.gene88705.t1 AT4G35580 43.640 456 198 18 17 459 1 410 1.04e-96 307
MS.gene88705.t1 AT4G35580 43.640 456 198 18 17 459 1 410 1.16e-96 307
MS.gene88705.t1 AT3G49530 38.462 468 177 15 15 459 3 382 1.46e-90 287
MS.gene88705.t1 AT3G49530 38.462 468 177 15 15 459 3 382 1.59e-90 289
MS.gene88705.t1 AT1G33060 37.129 606 274 20 16 550 15 584 3.70e-89 290
MS.gene88705.t1 AT1G33060 36.629 617 284 20 16 561 15 595 3.86e-89 290
MS.gene88705.t1 AT5G24590 47.110 346 118 12 15 330 3 313 4.82e-89 284
MS.gene88705.t1 AT3G17730 61.842 152 58 0 25 176 6 157 2.02e-60 202
MS.gene88705.t1 AT1G65910 54.444 180 72 1 25 194 6 185 5.64e-58 206
MS.gene88705.t1 AT5G17260 62.500 152 56 1 25 175 6 157 4.92e-57 200
MS.gene88705.t1 AT3G03200 62.500 152 56 1 25 175 6 157 7.31e-56 197
MS.gene88705.t1 AT3G10490 50.820 183 87 2 3 184 7 187 6.53e-53 182
MS.gene88705.t1 AT3G10480 51.429 175 83 1 3 177 7 179 1.33e-52 187
MS.gene88705.t1 AT3G10480 52.247 178 78 3 3 177 7 180 1.68e-52 187
MS.gene88705.t1 AT3G10500 55.484 155 69 0 21 175 5 159 2.86e-52 189
MS.gene88705.t1 AT3G10490 50.820 183 87 2 3 184 7 187 2.64e-51 184
MS.gene88705.t1 AT4G17980 55.346 159 63 3 25 177 6 162 5.18e-51 177
MS.gene88705.t1 AT5G04410 53.548 155 72 0 21 175 5 159 5.81e-51 186
MS.gene88705.t1 AT5G46590 54.140 157 66 3 25 177 6 160 9.20e-51 178
MS.gene88705.t1 AT4G17980 55.346 159 63 3 25 177 6 162 9.20e-51 178
MS.gene88705.t1 AT1G54330 58.278 151 60 1 25 175 6 153 6.25e-50 176
MS.gene88705.t1 AT1G62700 52.564 156 71 3 21 175 3 156 8.13e-50 178
MS.gene88705.t1 AT1G62700 52.564 156 71 3 21 175 3 156 8.13e-50 178
MS.gene88705.t1 AT1G12260 51.923 156 72 3 21 175 3 156 1.72e-49 176
MS.gene88705.t1 AT1G12260 51.923 156 72 3 21 175 3 156 2.59e-49 177
MS.gene88705.t1 AT5G46590 59.375 128 51 1 25 151 6 133 5.46e-49 172
MS.gene88705.t1 AT5G07680 55.063 158 57 3 25 175 3 153 8.60e-49 173
MS.gene88705.t1 AT5G07680 55.063 158 57 3 25 175 17 167 1.08e-48 173
MS.gene88705.t1 AT5G61430 55.556 153 64 2 25 175 16 166 1.26e-48 173
MS.gene88705.t1 AT5G62380 49.091 165 81 2 21 184 3 165 2.20e-48 173
MS.gene88705.t1 AT5G62380 49.091 165 81 2 21 184 3 165 2.20e-48 173
MS.gene88705.t1 AT5G39610 56.209 153 63 2 25 175 20 170 2.91e-48 171
MS.gene88705.t1 AT4G10350 53.289 152 70 1 25 175 9 160 4.16e-48 172
MS.gene88705.t1 AT2G27300 51.899 158 68 3 20 177 9 158 5.71e-48 171
MS.gene88705.t1 AT3G44290 55.172 145 57 2 28 172 17 153 7.27e-48 168
MS.gene88705.t1 AT1G33280 53.896 154 67 2 25 177 8 158 8.58e-48 170
MS.gene88705.t1 AT1G32510 51.515 165 72 2 25 181 6 170 1.62e-47 169
MS.gene88705.t1 AT2G18060 44.271 192 94 4 25 212 9 191 1.69e-47 171
MS.gene88705.t1 AT2G18060 44.271 192 94 4 25 212 9 191 1.69e-47 171
MS.gene88705.t1 AT5G09330 41.702 235 126 4 24 254 5 232 8.35e-47 172
MS.gene88705.t1 AT5G09330 41.702 235 126 4 24 254 5 232 8.35e-47 172
MS.gene88705.t1 AT5G09330 41.702 235 126 4 24 254 5 232 8.35e-47 172
MS.gene88705.t1 AT5G09330 41.702 235 126 4 24 254 5 232 8.35e-47 172
MS.gene88705.t1 AT5G09330 41.702 235 126 4 24 254 5 232 8.35e-47 172
MS.gene88705.t1 AT3G44290 55.172 145 57 2 28 172 17 153 8.64e-47 168
MS.gene88705.t1 AT5G22290 53.793 145 60 2 28 172 24 161 1.51e-46 168
MS.gene88705.t1 AT4G27410 50.000 164 77 2 12 175 4 162 1.90e-46 166
MS.gene88705.t1 AT3G29035 51.724 174 79 4 25 195 24 195 2.98e-46 166
MS.gene88705.t1 AT4G36160 50.658 152 72 2 25 175 10 159 3.29e-46 168
MS.gene88705.t1 AT4G36160 50.658 152 72 2 25 175 10 159 3.29e-46 168
MS.gene88705.t1 AT4G36160 50.658 152 72 2 25 175 14 163 3.69e-46 168
MS.gene88705.t1 AT5G08790 50.000 176 76 4 25 193 7 177 3.95e-46 165
MS.gene88705.t1 AT3G10480 45.366 205 73 4 9 177 12 213 8.70e-46 170
MS.gene88705.t1 AT3G18400 53.289 152 66 3 25 175 5 152 1.71e-45 164
MS.gene88705.t1 AT5G66300 50.000 152 74 2 25 175 12 162 2.08e-45 163
MS.gene88705.t1 AT1G69490 48.521 169 77 3 17 179 1 165 4.36e-45 162
MS.gene88705.t1 AT2G24430 54.248 153 65 3 25 175 16 165 7.06e-45 162
MS.gene88705.t1 AT2G24430 54.248 153 65 3 25 175 16 165 7.06e-45 162
MS.gene88705.t1 AT5G63790 49.451 182 79 6 25 199 50 225 7.42e-45 162
MS.gene88705.t1 AT5G63790 49.451 182 79 6 25 199 60 235 8.13e-45 162
MS.gene88705.t1 AT5G64060 50.000 152 76 0 25 176 6 157 1.39e-44 163
MS.gene88705.t1 AT3G15500 49.091 165 79 2 12 176 4 163 1.54e-44 162
MS.gene88705.t1 AT1G34190 55.405 148 66 0 28 175 19 166 1.80e-44 167
MS.gene88705.t1 AT3G04060 51.534 163 64 4 25 179 20 175 2.60e-44 162
MS.gene88705.t1 AT1G34180 53.378 148 69 0 28 175 19 166 3.16e-44 164
MS.gene88705.t1 AT1G76420 52.941 153 67 3 25 175 22 171 3.32e-44 161
MS.gene88705.t1 AT5G18270 50.000 174 77 4 14 179 5 176 3.72e-44 161
MS.gene88705.t1 AT5G18270 50.000 174 77 4 14 179 5 176 5.97e-44 160
MS.gene88705.t1 AT1G56010 48.795 166 69 4 24 180 18 176 6.35e-44 160
MS.gene88705.t1 AT1G52890 48.485 165 80 2 12 176 4 163 8.73e-44 159
MS.gene88705.t1 AT1G71930 48.684 152 75 2 25 175 9 158 9.88e-44 159
MS.gene88705.t1 AT1G71930 48.684 152 75 2 25 175 9 158 9.88e-44 159
MS.gene88705.t1 AT2G02450 50.336 149 69 3 28 175 54 198 1.03e-43 161
MS.gene88705.t1 AT1G26870 44.920 187 86 4 28 199 19 203 1.09e-43 162
MS.gene88705.t1 AT2G02450 50.336 149 69 3 28 175 54 198 1.14e-43 162
MS.gene88705.t1 AT2G46770 41.463 205 97 5 13 194 4 208 1.64e-43 160
MS.gene88705.t1 AT3G15170 52.229 157 59 4 25 172 20 169 1.79e-43 159
MS.gene88705.t1 AT1G34180 53.378 148 69 0 28 175 19 166 1.98e-43 164
MS.gene88705.t1 AT4G27410 45.810 179 79 2 12 175 4 179 2.10e-43 158
MS.gene88705.t1 AT3G12977 44.385 187 95 5 25 205 18 201 3.38e-43 157
MS.gene88705.t1 AT3G04070 47.126 174 78 5 25 186 10 181 4.82e-43 158
MS.gene88705.t1 AT1G01720 50.000 160 69 4 22 175 4 158 5.02e-43 157
MS.gene88705.t1 AT1G32770 46.023 176 72 4 17 175 8 177 1.70e-42 157
MS.gene88705.t1 AT5G13180 50.649 154 68 3 24 175 13 160 3.93e-42 153
MS.gene88705.t1 AT2G33480 51.316 152 69 1 24 175 14 160 4.49e-42 153
MS.gene88705.t1 AT5G39820 46.199 171 67 5 28 175 23 191 4.71e-42 155
MS.gene88705.t1 AT1G77450 38.400 250 118 8 24 268 9 227 1.03e-41 152
MS.gene88705.t1 AT1G61110 50.000 164 67 4 25 175 16 177 3.19e-41 152
MS.gene88705.t1 AT1G34180 49.375 160 69 1 28 175 19 178 5.15e-41 155
MS.gene88705.t1 AT5G53950 51.875 160 61 4 25 175 17 169 5.26e-41 154
MS.gene88705.t1 AT2G33480 51.316 152 67 2 24 175 14 158 8.15e-41 150
MS.gene88705.t1 AT2G43000 46.452 155 79 3 23 175 15 167 1.12e-40 150
MS.gene88705.t1 AT3G04070 43.158 190 78 5 25 186 10 197 1.33e-40 152
MS.gene88705.t1 AT3G61910 41.573 178 84 3 17 177 3 177 1.38e-40 151
MS.gene88705.t1 AT1G34180 49.375 160 69 1 28 175 19 178 2.58e-40 155
MS.gene88705.t1 AT1G79580 49.020 153 73 3 25 175 17 166 2.76e-40 151
MS.gene88705.t1 AT1G79580 49.020 153 73 3 25 175 17 166 2.76e-40 151
MS.gene88705.t1 AT1G79580 49.020 153 73 3 25 175 17 166 2.76e-40 151
MS.gene88705.t1 AT1G79580 49.020 153 73 3 25 175 17 166 2.76e-40 151
MS.gene88705.t1 AT1G79580 49.020 153 73 3 25 175 17 166 2.76e-40 151
MS.gene88705.t1 AT3G15510 45.562 169 77 3 29 184 21 187 4.61e-40 150
MS.gene88705.t1 AT2G17040 37.308 260 143 7 28 274 9 261 1.94e-38 144
MS.gene88705.t1 AT4G28530 41.315 213 101 4 24 218 9 215 1.95e-37 143
MS.gene88705.t1 AT1G32870 51.634 153 70 2 25 175 10 160 6.04e-37 145
MS.gene88705.t1 AT1G32870 51.634 153 70 2 25 175 10 160 6.52e-37 145
MS.gene88705.t1 AT5G04395 45.714 140 62 2 25 150 28 167 1.20e-36 135
MS.gene88705.t1 AT1G32870 51.634 153 70 2 25 175 46 196 1.64e-36 144
MS.gene88705.t1 AT3G12910 41.837 196 82 9 1 175 1 185 9.62e-36 137
MS.gene88705.t1 AT4G01550 40.884 181 91 5 27 199 6 178 4.53e-35 139
MS.gene88705.t1 AT1G52880 46.626 163 73 4 29 179 21 181 2.13e-34 133
MS.gene88705.t1 AT5G61430 60.204 98 37 1 80 175 6 103 1.03e-33 130
MS.gene88705.t1 AT1G02230 42.045 176 86 8 26 193 4 171 1.79e-31 126
MS.gene88705.t1 AT3G12977 44.961 129 66 2 82 205 20 148 2.74e-31 122
MS.gene88705.t1 AT4G10350 55.319 94 42 0 82 175 20 113 3.34e-30 121
MS.gene88705.t1 AT4G01520 36.066 183 91 6 22 196 1 165 3.56e-30 121
MS.gene88705.t1 AT5G22380 41.139 158 86 5 23 173 3 160 2.12e-29 117
MS.gene88705.t1 AT4G01540 35.955 178 88 6 27 196 6 165 1.17e-28 119
MS.gene88705.t1 AT4G01540 35.955 178 88 6 27 196 6 165 1.22e-28 119
MS.gene88705.t1 AT4G01540 35.955 178 88 6 27 196 6 165 2.18e-28 118
MS.gene88705.t1 AT4G01540 35.955 178 88 6 27 196 6 165 2.55e-28 119
MS.gene88705.t1 AT3G44350 38.509 161 94 4 24 179 4 164 3.36e-28 114
MS.gene88705.t1 AT1G56010 49.138 116 44 3 73 180 1 109 5.03e-28 114
MS.gene88705.t1 AT1G02250 43.137 153 73 7 26 172 4 148 8.08e-28 115
MS.gene88705.t1 AT3G04420 35.776 232 120 8 26 245 4 218 3.34e-27 112
MS.gene88705.t1 AT3G04420 35.776 232 120 8 26 245 4 218 4.16e-27 113
MS.gene88705.t1 AT3G44350 41.667 132 73 3 24 151 4 135 1.58e-26 106
MS.gene88705.t1 AT2G33480 47.573 103 54 0 73 175 1 103 8.16e-26 106
MS.gene88705.t1 AT1G01010 38.650 163 83 4 27 179 5 160 4.10e-25 108
MS.gene88705.t1 AT3G10490 60.000 80 31 1 99 177 1 80 8.58e-24 103
MS.gene88705.t1 AT3G10490 60.000 80 31 1 99 177 1 80 8.58e-24 103
MS.gene88705.t1 AT1G02220 39.073 151 80 4 26 173 4 145 1.40e-22 100
MS.gene88705.t1 AT4G28530 47.273 110 40 2 24 117 9 116 4.25e-21 95.1
MS.gene88705.t1 AT2G18060 40.000 110 54 3 106 212 3 103 8.92e-20 90.5
MS.gene88705.t1 AT2G43000 45.349 86 46 1 91 175 4 89 5.05e-18 83.2
MS.gene88705.t1 AT5G64530 36.719 128 65 4 25 150 3 116 6.59e-18 81.6
MS.gene88705.t1 AT5G22290 55.224 67 24 1 106 172 2 62 2.31e-17 82.4
MS.gene88705.t1 AT5G64530 30.108 186 92 6 25 194 3 166 2.96e-17 80.9
MS.gene88705.t1 AT3G04430 34.559 136 75 5 31 154 6 139 1.31e-14 73.6
MS.gene88705.t1 AT5G14000 31.783 129 82 2 24 150 14 138 2.64e-14 71.2
MS.gene88705.t1 AT3G55210 29.448 163 95 6 25 173 11 167 1.82e-13 71.6
MS.gene88705.t1 AT5G14000 31.783 129 82 2 24 150 14 138 6.58e-13 68.6
MS.gene88705.t1 AT5G50820 32.576 132 75 4 24 151 16 137 6.90e-13 68.2
MS.gene88705.t1 AT3G56530 27.152 151 105 3 25 173 52 199 1.17e-12 69.7
MS.gene88705.t1 AT4G28500 30.769 156 84 7 15 151 49 199 1.63e-11 66.2

Find 178 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGTATTGCTTGTTAATATT+TGG 0.124257 5.4:+54008165 MS.gene88705:CDS
GCACACTTTCCACCAGAATT+TGG 0.222116 5.4:+54006949 MS.gene88705:CDS
ATATGAACAATCGAGGATTT+TGG 0.228322 5.4:+54007743 MS.gene88705:CDS
ATGGAAACGGTGATGAAGTT+TGG 0.238292 5.4:+54004992 MS.gene88705:CDS
AGTATTGCTTGTTAATATTT+GGG 0.242660 5.4:+54008166 MS.gene88705:CDS
TATCTGAGGATGAAGATTAA+TGG 0.254859 5.4:+54004973 MS.gene88705:CDS
TCCACCAGAATTTGGCTATC+AGG 0.273763 5.4:+54006957 MS.gene88705:CDS
AGGTCAGACTGTATTTCTTC+TGG 0.275801 5.4:-54006533 None:intergenic
TATTTCTTCTGGAGAGTAAT+TGG 0.283362 5.4:-54006522 None:intergenic
TGCCGTTAGGGTTCCGCTTC+CGG 0.296315 5.4:+54004923 MS.gene88705:CDS
GTGGAAAGTGTGCATGGGCT+GGG 0.298461 5.4:-54006939 None:intergenic
AAGATAGAGGAACCGGATTT+AGG 0.298716 5.4:-54006553 None:intergenic
TCGATGGCGGCACTGGAATT+AGG 0.299505 5.4:+54007568 MS.gene88705:CDS
CTTCCTTGTGCTTGCATCAC+CGG 0.303512 5.4:-54007633 None:intergenic
GGTGGAAAGTGTGCATGGGC+TGG 0.306967 5.4:-54006940 None:intergenic
TGAATCACTGGGTTCATGTT+TGG 0.314659 5.4:-54007819 None:intergenic
CTACCTTGTGCTTGAATCAC+TGG 0.326312 5.4:-54007831 None:intergenic
TGGAAACGGTGATGAAGTTT+GGG 0.329063 5.4:+54004993 MS.gene88705:CDS
TGGATAGTGACACTGGTATA+AGG 0.334529 5.4:+54007763 MS.gene88705:CDS
CATTTACCACAGTGGTCATT+TGG 0.341009 5.4:-54007512 None:intergenic
TTGAACCGCGCAACAACTAA+TGG 0.350476 5.4:+54005917 MS.gene88705:CDS
TTGGCCTGATAGCCAAATTC+TGG 0.370776 5.4:-54006961 None:intergenic
ATTGCTTCCTCGGAGTTCTC+AGG 0.373613 5.4:-54006617 None:intergenic
AACAATGAATTAATTCAGTA+TGG 0.382424 5.4:+54006982 MS.gene88705:CDS
AAGTCTGGTGCTACCTTGAT+TGG 0.382746 5.4:+54005974 MS.gene88705:CDS
ATACTGAATTAATTCATTGT+TGG 0.391012 5.4:-54006980 None:intergenic
TTTCAACTCGTGTGTTAATT+GGG 0.393985 5.4:+54007032 MS.gene88705:CDS
AACAAGCGACAGAGGACATA+TGG 0.406035 5.4:-54006425 None:intergenic
ACTTTCTGTTGGGCAGGGTT+CGG 0.421621 5.4:+54008066 MS.gene88705:CDS
TTCCTTGTGCTTGCATCACC+GGG 0.423967 5.4:-54007632 None:intergenic
CAGCGACTCGGATGTGGAAA+TGG 0.427111 5.4:+54007131 MS.gene88705:CDS
TGCATATTCTGCCATTGTAA+TGG 0.428587 5.4:+54008136 MS.gene88705:CDS
GACATGGGAGATGTCTTCTC+TGG 0.433533 5.4:-54007984 None:intergenic
AGATGAGAGTGGACCTGTCC+AGG 0.434794 5.4:-54006106 None:intergenic
ACTGTTGTCGATGGCGGCAC+TGG 0.435924 5.4:+54007561 MS.gene88705:CDS
GGAAGATCAGCTGTTAAACT+TGG 0.436056 5.4:+54006861 MS.gene88705:intron
TGCATCACCGGGTTCATGTC+TGG 0.438226 5.4:-54007621 None:intergenic
TATCATTAGAAAGAGTCATC+TGG 0.440631 5.4:-54007482 None:intergenic
TTAATTCAGTATGGTACAAA+CGG 0.441461 5.4:+54006991 MS.gene88705:CDS
CTACGCTGGTCGTGCTCCGA+AGG 0.442215 5.4:+54006018 MS.gene88705:CDS
TCACTGAACAAGCTGCCGTT+AGG 0.444340 5.4:+54004910 MS.gene88705:CDS
TGCCTTTCATCTTCTGTCGC+TGG 0.445612 5.4:-54006581 None:intergenic
GTGGTTCTTCTTCTGTCCAA+TGG 0.448539 5.4:+54005868 MS.gene88705:CDS
TTCGGATACTTCCGATCCAT+TGG 0.452190 5.4:-54005884 None:intergenic
TGTTTGTAAATTTGAGCCTT+GGG 0.455207 5.4:+54005032 MS.gene88705:CDS
ATATGAGCAAATGTGGAATT+CGG 0.456375 5.4:+54007536 MS.gene88705:CDS
AATGTGGGACATTGCTTCCT+CGG 0.456840 5.4:-54006627 None:intergenic
TACAAAAGATGAGAGTTTGC+AGG 0.457897 5.4:+54007914 MS.gene88705:CDS
TCTGAGGAGACGACGGAAGA+TGG 0.460186 5.4:+54007705 MS.gene88705:CDS
CCTACCTTAAAAGAGCTTGA+TGG 0.460227 5.4:+54006076 MS.gene88705:CDS
AGTCTTCTTCATTCCAATCA+AGG 0.464930 5.4:-54005987 None:intergenic
CGAAGGGGAAGAGGACTCAT+TGG 0.465437 5.4:+54006035 MS.gene88705:CDS
GTCGTGCTCCGAAGGGGAAG+AGG 0.472177 5.4:+54006026 MS.gene88705:CDS
CAATGAGTCCTCTTCCCCTT+CGG 0.474008 5.4:-54006034 None:intergenic
GTCGCAACAAGCGGAGGAGC+TGG 0.476862 5.4:+54004879 MS.gene88705:CDS
ATGTTTGTAAATTTGAGCCT+TGG 0.478978 5.4:+54005031 MS.gene88705:CDS
TGAACCGCGCAACAACTAAT+GGG 0.482788 5.4:+54005918 MS.gene88705:CDS
CAAGCTCCTCGTCGGTAGGC+CGG 0.483643 5.4:-54004942 None:intergenic
ACAGATCTCTCTTGCTGACA+TGG 0.487787 5.4:-54008000 None:intergenic
ACTCTTTCTAATGATAGCAT+TGG 0.489866 5.4:+54007489 MS.gene88705:CDS
CACTGAACAAGCTGCCGTTA+GGG 0.490131 5.4:+54004911 MS.gene88705:CDS
ACTCCGCAAAATAGTGATGT+AGG 0.490578 5.4:+54007441 MS.gene88705:CDS
GAGCTTGATGGCACCAACCC+TGG 0.490651 5.4:+54006088 MS.gene88705:CDS
GGTGAGGAAGATAGAGGAAC+CGG 0.491324 5.4:-54006560 None:intergenic
GCGCAACAACTAATGGGTAT+TGG 0.492493 5.4:+54005924 MS.gene88705:CDS
TTGTAGATTTATCGATCGTA+AGG 0.496524 5.4:+54005831 MS.gene88705:intron
GCCGTGCAGCGACTCGGATG+TGG 0.497897 5.4:+54007125 MS.gene88705:CDS
ACGATTTGAGCTTGAGCCAT+GGG 0.499250 5.4:+54006900 MS.gene88705:CDS
TTTGAGCCTTGGGATTTGCC+TGG 0.499957 5.4:+54005042 MS.gene88705:CDS
AAGACTGATAGACGCCTCAC+TGG 0.500018 5.4:-54007064 None:intergenic
GTGACACTGGTATAAGGATA+AGG 0.500211 5.4:+54007769 MS.gene88705:CDS
CCTCGTCGGTAGGCCGGAAG+CGG 0.502257 5.4:-54004936 None:intergenic
CGGTTCAATCTGCTCCCATT+CGG 0.502927 5.4:-54005902 None:intergenic
TACAACTGCAGAATCCAACT+TGG 0.503596 5.4:+54008034 MS.gene88705:CDS
CTGAGGAGACGACGGAAGAT+GGG 0.508026 5.4:+54007706 MS.gene88705:CDS
GCTGTTACTAACCATCATAT+TGG 0.508994 5.4:-54007154 None:intergenic
TGCACCAAGGAGAATACGAT+TGG 0.510811 5.4:+54007656 MS.gene88705:CDS
AGATGAGAGTTTGCAGGAGA+CGG 0.513317 5.4:+54007920 MS.gene88705:CDS
TCTTCTTCTGTCCAATGGAT+CGG 0.515035 5.4:+54005873 MS.gene88705:CDS
AAAGATCGAAGGATTAAGTC+TGG 0.517270 5.4:+54005959 MS.gene88705:CDS
AATACAGTCTGACCTAAATC+CGG 0.519540 5.4:+54006541 MS.gene88705:CDS
CCTCCCAATCGTATTCTCCT+TGG 0.520034 5.4:-54007660 None:intergenic
CAAGCATTCCCTTGTTTCCG+AGG 0.521043 5.4:+54007887 MS.gene88705:CDS
TACGCTGGTCGTGCTCCGAA+GGG 0.521050 5.4:+54006019 MS.gene88705:CDS
GAAGGGGAAGAGGACTCATT+GGG 0.524078 5.4:+54006036 MS.gene88705:CDS
TACCTTGTGCTTGAATCACT+GGG 0.526925 5.4:-54007830 None:intergenic
TAATTCAGTATGGTACAAAC+GGG 0.529323 5.4:+54006992 MS.gene88705:CDS
TTGTAGTCTCCTCGGAAACA+AGG 0.529566 5.4:-54007896 None:intergenic
CACGATTTGAGCTTGAGCCA+TGG 0.532975 5.4:+54006899 MS.gene88705:CDS
TTCATCTTCTGTCGCTGGTG+AGG 0.536502 5.4:-54006576 None:intergenic
TGGAAAGTGTGCATGGGCTG+GGG 0.538723 5.4:-54006938 None:intergenic
GCCCCGCGTAGAATACGATT+AGG 0.540078 5.4:+54007855 MS.gene88705:CDS
TGATGGCACCAACCCTGGAC+AGG 0.541882 5.4:+54006093 MS.gene88705:CDS
ATCATTAGAAAGAGTCATCT+GGG 0.542441 5.4:-54007481 None:intergenic
GCGGCACTGGAATTAGGATA+AGG 0.543075 5.4:+54007574 MS.gene88705:CDS
TACAATCTTACCTCTGCAGC+CGG 0.543757 5.4:-54006719 None:intergenic
GTATTGCTTGTTAATATTTG+GGG 0.547201 5.4:+54008167 MS.gene88705:CDS
ACAAGCGACAGAGGACATAT+GGG 0.548875 5.4:-54006424 None:intergenic
AATGGGTATTGGAAGGCGAC+AGG 0.549560 5.4:+54005935 MS.gene88705:CDS
AGGATGAAGATTAATGGAAA+CGG 0.550978 5.4:+54004979 MS.gene88705:CDS
TTGCTTCCTCGGAGTTCTCA+GGG 0.552044 5.4:-54006616 None:intergenic
ATCAGCTGTGGTTATAATGT+GGG 0.552722 5.4:-54006642 None:intergenic
ACATCAGAGTTTAGATGTAC+CGG 0.554540 5.4:+54006700 MS.gene88705:CDS
AGTTCTCAGGGATAGCTGCT+AGG 0.556276 5.4:-54006604 None:intergenic
TAAATGAATATGAGCAAATG+TGG 0.557259 5.4:+54007529 MS.gene88705:CDS
CTCCTAATCGTATTCTACGC+GGG 0.566860 5.4:-54007857 None:intergenic
AAATGGGCCGTGCAGCGACT+CGG 0.567183 5.4:+54007119 MS.gene88705:CDS
TCAACAAGCTCCTCGTCGGT+AGG 0.569226 5.4:-54004946 None:intergenic
CCGTCGTCTCCTCAGAAACA+AGG 0.569989 5.4:-54007698 None:intergenic
GAGAATAACTTATCATCCCA+TGG 0.570032 5.4:-54006916 None:intergenic
ACAACTGCAGAATCCAACTT+GGG 0.570272 5.4:+54008035 MS.gene88705:CDS
AATCAGCTGTGGTTATAATG+TGG 0.574900 5.4:-54006643 None:intergenic
GGCCGGAAGCGGAACCCTAA+CGG 0.575633 5.4:-54004925 None:intergenic
TGGATCGGAAGTATCCGAAT+GGG 0.576646 5.4:+54005888 MS.gene88705:CDS
TGCGCGTTGCCTTGTTTCTG+AGG 0.578970 5.4:+54007689 MS.gene88705:CDS
CAGATCTCTCTTGCTGACAT+GGG 0.580999 5.4:-54007999 None:intergenic
GATGAGAGTGGACCTGTCCA+GGG 0.584499 5.4:-54006105 None:intergenic
GTCGCTGGTGAGGAAGATAG+AGG 0.584757 5.4:-54006566 None:intergenic
TGTGGAAATGGCCAATATGA+TGG 0.586555 5.4:+54007143 MS.gene88705:CDS
AGACCGCATCGCGCTAATCG+AGG 0.586661 5.4:-54008105 None:intergenic
TCCTCCGCTTGTTGCGACGA+CGG 0.588388 5.4:-54004874 None:intergenic
TTTAGATGTACCGGCTGCAG+AGG 0.589169 5.4:+54006709 MS.gene88705:CDS
TCGGATACTGTTGTCGATGG+CGG 0.589834 5.4:+54007555 MS.gene88705:CDS
CTCCGCAAAATAGTGATGTA+GGG 0.592820 5.4:+54007442 MS.gene88705:CDS
GGGAGATGTCTTCTCTGGAT+CGG 0.592942 5.4:-54007979 None:intergenic
GCCTGATAGCCAAATTCTGG+TGG 0.593697 5.4:-54006958 None:intergenic
CACCAGCGACAGAAGATGAA+AGG 0.594608 5.4:+54006579 MS.gene88705:CDS
GCACCAAGGAGAATACGATT+GGG 0.595669 5.4:+54007657 MS.gene88705:CDS
ATTCTGGTGGAAAGTGTGCA+TGG 0.598446 5.4:-54006945 None:intergenic
TCCACATCCGAGTCGCTGCA+CGG 0.599043 5.4:-54007126 None:intergenic
AGAGTGGACCTGTCCAGGGT+TGG 0.600613 5.4:-54006101 None:intergenic
CTCTTACCAGGCAAATCCCA+AGG 0.602139 5.4:-54005048 None:intergenic
AACAACTAATGGGTATTGGA+AGG 0.603041 5.4:+54005928 MS.gene88705:CDS
AACCCGGTGATGCAAGCACA+AGG 0.605040 5.4:+54007630 MS.gene88705:CDS
TTCTGGTGGAAAGTGTGCAT+GGG 0.611417 5.4:-54006944 None:intergenic
TTTATCGATCGTAAGGAACA+AGG 0.615540 5.4:+54005838 MS.gene88705:CDS
GGACAGAAGAAGAACCACTC+TGG 0.616496 5.4:-54005863 None:intergenic
AATTCGGATACTGTTGTCGA+TGG 0.617050 5.4:+54007552 MS.gene88705:CDS
TGTAGTCTCCTCGGAAACAA+GGG 0.617655 5.4:-54007895 None:intergenic
CCTTGTTTCTGAGGAGACGA+CGG 0.618343 5.4:+54007698 MS.gene88705:CDS
ACGCTGGTCGTGCTCCGAAG+GGG 0.619237 5.4:+54006020 MS.gene88705:CDS
ATGGCTCAAGCTCAAATCGT+GGG 0.621257 5.4:-54006897 None:intergenic
CCGCTTCCGGCCTACCGACG+AGG 0.622393 5.4:+54004936 MS.gene88705:CDS
ATGGATCGGAAGTATCCGAA+TGG 0.622532 5.4:+54005887 MS.gene88705:CDS
CCGCGTAGAATACGATTAGG+AGG 0.622604 5.4:+54007858 MS.gene88705:CDS
AATACCCATTAGTTGTTGCG+CGG 0.626523 5.4:-54005922 None:intergenic
GCATCACATGATTATCCAGA+GGG 0.629292 5.4:+54007414 MS.gene88705:CDS
CATGGCTCAAGCTCAAATCG+TGG 0.630025 5.4:-54006898 None:intergenic
GCAACAAGCGGAGGAGCTGG+CGG 0.630298 5.4:+54004882 MS.gene88705:CDS
TTTACCGTCGTCGCAACAAG+CGG 0.632140 5.4:+54004870 MS.gene88705:CDS
CAGCACTCTCAGAAGCAGCA+TGG 0.632943 5.4:-54007956 None:intergenic
CTCATATTCATTTACCACAG+TGG 0.633818 5.4:-54007520 None:intergenic
TCCTAATCGTATTCTACGCG+GGG 0.637438 5.4:-54007856 None:intergenic
AAAATCAACAAGCTCCTCGT+CGG 0.639154 5.4:-54004950 None:intergenic
GGAGAGTAATTGGCAGTCGT+AGG 0.642617 5.4:-54006512 None:intergenic
CGACGGTAAACACTCAACTA+CGG 0.643070 5.4:-54004857 None:intergenic
AGGCGACAGGAAAAGATCGA+AGG 0.646724 5.4:+54005948 MS.gene88705:CDS
CCAAGGAGAATACGATTGGG+AGG 0.651383 5.4:+54007660 MS.gene88705:CDS
GCTTCTTAAACAAGCGACAG+AGG 0.652313 5.4:-54006433 None:intergenic
ACCGTCGTCGCAACAAGCGG+AGG 0.653126 5.4:+54004873 MS.gene88705:CDS
AAGTTCAAACTGTGGCGAAG+CGG 0.656580 5.4:+54006472 MS.gene88705:CDS
TACTAGCGAAACCATTACAA+TGG 0.657140 5.4:-54008147 None:intergenic
TGAACAACCAGACATGAACC+CGG 0.672019 5.4:+54007614 MS.gene88705:CDS
CAGCAGAATATGAACAATCG+AGG 0.672727 5.4:+54007736 MS.gene88705:CDS
ACACTGGTATAAGGATAAGG+AGG 0.673680 5.4:+54007772 MS.gene88705:CDS
AGCATCACATGATTATCCAG+AGG 0.675169 5.4:+54007413 MS.gene88705:CDS
AACCCAGTGATTCAAGCACA+AGG 0.683254 5.4:+54007828 MS.gene88705:CDS
CCTCCTAATCGTATTCTACG+CGG 0.684086 5.4:-54007858 None:intergenic
CATCCTCGATTAGCGCGATG+CGG 0.693901 5.4:+54008102 MS.gene88705:CDS
ATCGCTATAGCAATCAGCTG+TGG 0.699347 5.4:-54006654 None:intergenic
CAACTGCAGAATCCAACTTG+GGG 0.705558 5.4:+54008036 MS.gene88705:CDS
TTGGGACGAGTTCTCCAGTG+AGG 0.712013 5.4:+54007050 MS.gene88705:CDS
AGTCTTGAAAGTTCAAACTG+TGG 0.713723 5.4:+54006464 MS.gene88705:CDS
ATTAGGATAAGGTCTAGACA+AGG 0.726784 5.4:+54007585 MS.gene88705:CDS
AGCTATCCCTGAGAACTCCG+AGG 0.733615 5.4:+54006610 MS.gene88705:CDS
AAGCACAAGGAAGTGCACCA+AGG 0.746045 5.4:+54007643 MS.gene88705:CDS
TAAGGAACAAGGATCCAGAG+TGG 0.758355 5.4:+54005849 MS.gene88705:CDS
CATTGGCCAAATGACCACTG+TGG 0.781657 5.4:+54007506 MS.gene88705:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTATTGTATATATGT+GGG + chr5.4:54007322-54007341 MS.gene88705:intron 10.0%
!!! GAAAAAAATTTGATTTTTAA+AGG + chr5.4:54005282-54005301 MS.gene88705:intron 10.0%
!! AAATAAAACATTAAAGGAAA+AGG - chr5.4:54006768-54006787 None:intergenic 15.0%
!! ATACAATAAAATTTGTGTTA+AGG - chr5.4:54007316-54007335 None:intergenic 15.0%
!! TCATTCAAATAAAACATTAA+AGG - chr5.4:54006774-54006793 None:intergenic 15.0%
!! TTGATATGTAAATTTATAAG+TGG + chr5.4:54005190-54005209 MS.gene88705:intron 15.0%
!!! ATTAGTTTTGTTGAAAATTA+GGG + chr5.4:54005395-54005414 MS.gene88705:intron 15.0%
!!! ATTTTCTGGAATTTTAAAAA+TGG - chr5.4:54007103-54007122 None:intergenic 15.0%
!!! ATTTTTAAAATTCCAGAAAA+TGG + chr5.4:54007102-54007121 MS.gene88705:CDS 15.0%
!!! CAAATTTTATTGTATATATG+TGG + chr5.4:54007321-54007340 MS.gene88705:intron 15.0%
!!! TTTTTAAAATTCCAGAAAAT+GGG + chr5.4:54007103-54007122 MS.gene88705:CDS 15.0%
!! AACAATGAATTAATTCAGTA+TGG + chr5.4:54006982-54007001 MS.gene88705:CDS 20.0%
!! AACCAAACATAAAAAAAAGA+AGG - chr5.4:54006132-54006151 None:intergenic 20.0%
!! ATACTGAATTAATTCATTGT+TGG - chr5.4:54006983-54007002 None:intergenic 20.0%
!! TCAGATTAAAATTATATCCA+TGG - chr5.4:54007372-54007391 None:intergenic 20.0%
!! TTAAGAACATTAACAGAAAA+AGG - chr5.4:54007269-54007288 None:intergenic 20.0%
!!! AGTATTGCTTGTTAATATTT+GGG + chr5.4:54008166-54008185 MS.gene88705:CDS 20.0%
!!! ATACTAATTTTGGTGAAATT+TGG + chr5.4:54005542-54005561 MS.gene88705:intron 20.0%
!!! CATTAGTTTTGTTGAAAATT+AGG + chr5.4:54005394-54005413 MS.gene88705:intron 20.0%
!!! TACTAATTTTGGTGAAATTT+GGG + chr5.4:54005543-54005562 MS.gene88705:intron 20.0%
!!! TAGTATTGCTTGTTAATATT+TGG + chr5.4:54008165-54008184 MS.gene88705:CDS 20.0%
!!! TTCATAATTTTTGTTGATGA+TGG + chr5.4:54005789-54005808 MS.gene88705:intron 20.0%
!!! TTTAACTGTTTCTTGAATTT+AGG + chr5.4:54005083-54005102 MS.gene88705:intron 20.0%
!!! TTTTTGTTCTTTTGATGATT+TGG + chr5.4:54005106-54005125 MS.gene88705:intron 20.0%
! AATGACCAAACCAAAAAAAA+GGG - chr5.4:54007186-54007205 None:intergenic 25.0%
! ATTAGTCAAAGACAAGATAA+AGG - chr5.4:54006300-54006319 None:intergenic 25.0%
! CACAAAAAATTATTGTTCAG+TGG - chr5.4:54005703-54005722 None:intergenic 25.0%
! GATAAAAAAAATCTCTTACC+AGG - chr5.4:54005063-54005082 None:intergenic 25.0%
! TAAATGAATATGAGCAAATG+TGG + chr5.4:54007529-54007548 MS.gene88705:CDS 25.0%
! TACTTGATGTTAACTATTTC+AGG + chr5.4:54006840-54006859 MS.gene88705:intron 25.0%
! TAGGGAAAATTAATCTTGAA+TGG + chr5.4:54005413-54005432 MS.gene88705:intron 25.0%
! TTAATTCAGTATGGTACAAA+CGG + chr5.4:54006991-54007010 MS.gene88705:CDS 25.0%
! TTGTGAGAATTAATTTCGAA+TGG + chr5.4:54005718-54005737 MS.gene88705:intron 25.0%
! TTTGTCAATAGAAGATTTCA+TGG + chr5.4:54005457-54005476 MS.gene88705:intron 25.0%
!! GTAGTAGTGAATACTAATTT+TGG + chr5.4:54005532-54005551 MS.gene88705:intron 25.0%
!! GTATTGCTTGTTAATATTTG+GGG + chr5.4:54008167-54008186 MS.gene88705:CDS 25.0%
!! TATTGTTGACTGAAATTTCA+TGG + chr5.4:54005627-54005646 MS.gene88705:intron 25.0%
!!! ACTAATTTTGGTGAAATTTG+GGG + chr5.4:54005544-54005563 MS.gene88705:intron 25.0%
!!! CTCCTTCTTTTTTTTATGTT+TGG + chr5.4:54006127-54006146 MS.gene88705:intron 25.0%
!!! CTGGAATTTTAAAAATGGTA+GGG - chr5.4:54007098-54007117 None:intergenic 25.0%
!!! TCTGGAATTTTAAAAATGGT+AGG - chr5.4:54007099-54007118 None:intergenic 25.0%
!!! TGATTTTTAAAGGTTAAACG+TGG + chr5.4:54005292-54005311 MS.gene88705:intron 25.0%
!!! TTGATGATTTTGTTGATGAT+GGG + chr5.4:54005329-54005348 MS.gene88705:intron 25.0%
!!! TTTGATGATTTTGTTGATGA+TGG + chr5.4:54005328-54005347 MS.gene88705:intron 25.0%
!!! TTTTGTTGTAAGTTTATCAG+TGG + chr5.4:54005364-54005383 MS.gene88705:intron 25.0%
AAGTGCGTTGAAAACAATTA+TGG - chr5.4:54006251-54006270 None:intergenic 30.0%
ACTCTTTCTAATGATAGCAT+TGG + chr5.4:54007489-54007508 MS.gene88705:CDS 30.0%
ACTGACATCTATAATTGCTT+AGG - chr5.4:54006348-54006367 None:intergenic 30.0%
AGGATGAAGATTAATGGAAA+CGG + chr5.4:54004979-54004998 MS.gene88705:CDS 30.0%
AGTCACTTCAAATCAATAGA+AGG - chr5.4:54006798-54006817 None:intergenic 30.0%
ATATGAGCAAATGTGGAATT+CGG + chr5.4:54007536-54007555 MS.gene88705:CDS 30.0%
ATCATTAGAAAGAGTCATCT+GGG - chr5.4:54007484-54007503 None:intergenic 30.0%
ATGACCAAACCAAAAAAAAG+GGG - chr5.4:54007185-54007204 None:intergenic 30.0%
ATGTTTGTAAATTTGAGCCT+TGG + chr5.4:54005031-54005050 MS.gene88705:CDS 30.0%
GAATGACCAAACCAAAAAAA+AGG - chr5.4:54007187-54007206 None:intergenic 30.0%
TAATTCAGTATGGTACAAAC+GGG + chr5.4:54006992-54007011 MS.gene88705:CDS 30.0%
TATCATTAGAAAGAGTCATC+TGG - chr5.4:54007485-54007504 None:intergenic 30.0%
TATCTGAGGATGAAGATTAA+TGG + chr5.4:54004973-54004992 MS.gene88705:CDS 30.0%
TGTTTGTAAATTTGAGCCTT+GGG + chr5.4:54005032-54005051 MS.gene88705:CDS 30.0%
TTGTAGATTTATCGATCGTA+AGG + chr5.4:54005831-54005850 MS.gene88705:intron 30.0%
TTTCAACTCGTGTGTTAATT+GGG + chr5.4:54007032-54007051 MS.gene88705:CDS 30.0%
! AGCTATGTTTTCTAATACCA+TGG + chr5.4:54007352-54007371 MS.gene88705:intron 30.0%
! ATATGAACAATCGAGGATTT+TGG + chr5.4:54007743-54007762 MS.gene88705:CDS 30.0%
! ATGTTTCTAACTTCTCTACA+TGG + chr5.4:54006380-54006399 MS.gene88705:intron 30.0%
! TATTTCTTCTGGAGAGTAAT+TGG - chr5.4:54006525-54006544 None:intergenic 30.0%
! TGGGGGAAATTAATTTTGTA+TGG + chr5.4:54005562-54005581 MS.gene88705:intron 30.0%
! TTTTCAACTCGTGTGTTAAT+TGG + chr5.4:54007031-54007050 MS.gene88705:CDS 30.0%
! TTTTGTATGGTTAGATCATG+TGG + chr5.4:54005575-54005594 MS.gene88705:intron 30.0%
!! CTAATTTTGGTGAAATTTGG+GGG + chr5.4:54005545-54005564 MS.gene88705:intron 30.0%
!!! AGCTTGTTGATTTTTATCTG+AGG + chr5.4:54004959-54004978 MS.gene88705:CDS 30.0%
!!! TTCATGGTTTTGTTGATGAT+GGG + chr5.4:54005473-54005492 MS.gene88705:intron 30.0%
!!! TTTCATGGTTTTGTTGATGA+TGG + chr5.4:54005472-54005491 MS.gene88705:intron 30.0%
AAAAAAGAAGGAGATGAGAG+TGG - chr5.4:54006120-54006139 None:intergenic 35.0%
AAAGATCGAAGGATTAAGTC+TGG + chr5.4:54005959-54005978 MS.gene88705:CDS 35.0%
AATACAGTCTGACCTAAATC+CGG + chr5.4:54006541-54006560 MS.gene88705:CDS 35.0%
AATCAGCTGTGGTTATAATG+TGG - chr5.4:54006646-54006665 None:intergenic 35.0%
ACATCAGAGTTTAGATGTAC+CGG + chr5.4:54006700-54006719 MS.gene88705:CDS 35.0%
AGTCTTCTTCATTCCAATCA+AGG - chr5.4:54005990-54006009 None:intergenic 35.0%
AGTCTTGAAAGTTCAAACTG+TGG + chr5.4:54006464-54006483 MS.gene88705:CDS 35.0%
ATCAGCTGTGGTTATAATGT+GGG - chr5.4:54006645-54006664 None:intergenic 35.0%
ATTAGGATAAGGTCTAGACA+AGG + chr5.4:54007585-54007604 MS.gene88705:CDS 35.0%
CTCATATTCATTTACCACAG+TGG - chr5.4:54007523-54007542 None:intergenic 35.0%
GAGAATAACTTATCATCCCA+TGG - chr5.4:54006919-54006938 None:intergenic 35.0%
GCTGTTACTAACCATCATAT+TGG - chr5.4:54007157-54007176 None:intergenic 35.0%
TACAAAAGATGAGAGTTTGC+AGG + chr5.4:54007914-54007933 MS.gene88705:CDS 35.0%
TACTAGCGAAACCATTACAA+TGG - chr5.4:54008150-54008169 None:intergenic 35.0%
TGCATATTCTGCCATTGTAA+TGG + chr5.4:54008136-54008155 MS.gene88705:CDS 35.0%
TTTATCGATCGTAAGGAACA+AGG + chr5.4:54005838-54005857 MS.gene88705:CDS 35.0%
TTTCGAATGGTTAGATCATG+CGG + chr5.4:54005731-54005750 MS.gene88705:intron 35.0%
! AACCCTACATCACTATTTTG+CGG - chr5.4:54007447-54007466 None:intergenic 35.0%
! GTTAAGGTGTCAATTAGAGA+AGG - chr5.4:54007300-54007319 None:intergenic 35.0%
! GTTAGTTTCAGAACACATAG+CGG + chr5.4:54007234-54007253 MS.gene88705:intron 35.0%
!! AACAACTAATGGGTATTGGA+AGG + chr5.4:54005928-54005947 MS.gene88705:CDS 35.0%
!! GTTCTTTTGATGATTTGGAC+TGG + chr5.4:54005111-54005130 MS.gene88705:intron 35.0%
!! TTTGTTGATGATGGGTTTGT+GGG + chr5.4:54005337-54005356 MS.gene88705:intron 35.0%
!!! GATTTGGACTGGTTTTGATT+TGG + chr5.4:54005122-54005141 MS.gene88705:intron 35.0%
!!! TCATGGTTTTGTTGATGATG+GGG + chr5.4:54005474-54005493 MS.gene88705:intron 35.0%
!!! TTTTGTTGATGATGGGTTTG+TGG + chr5.4:54005336-54005355 MS.gene88705:intron 35.0%
AAAATCAACAAGCTCCTCGT+CGG - chr5.4:54004953-54004972 None:intergenic 40.0%
AAGATAGAGGAACCGGATTT+AGG - chr5.4:54006556-54006575 None:intergenic 40.0%
AATACCCATTAGTTGTTGCG+CGG - chr5.4:54005925-54005944 None:intergenic 40.0%
AATTCGGATACTGTTGTCGA+TGG + chr5.4:54007552-54007571 MS.gene88705:CDS 40.0%
ACAACTGCAGAATCCAACTT+GGG + chr5.4:54008035-54008054 MS.gene88705:CDS 40.0%
ACACTGGTATAAGGATAAGG+AGG + chr5.4:54007772-54007791 MS.gene88705:CDS 40.0%
ACTCCGCAAAATAGTGATGT+AGG + chr5.4:54007441-54007460 MS.gene88705:CDS 40.0%
AGCATCACATGATTATCCAG+AGG + chr5.4:54007413-54007432 MS.gene88705:CDS 40.0%
AGGTCAGACTGTATTTCTTC+TGG - chr5.4:54006536-54006555 None:intergenic 40.0%
ATGGAAACGGTGATGAAGTT+TGG + chr5.4:54004992-54005011 MS.gene88705:CDS 40.0%
ATGGTTAGATCATGCGGTTA+TGG + chr5.4:54005737-54005756 MS.gene88705:intron 40.0%
ATGGTTAGATCATGTGGTTG+TGG + chr5.4:54005581-54005600 MS.gene88705:intron 40.0%
CAGCAGAATATGAACAATCG+AGG + chr5.4:54007736-54007755 MS.gene88705:CDS 40.0%
CATTTACCACAGTGGTCATT+TGG - chr5.4:54007515-54007534 None:intergenic 40.0%
CCTACCTTAAAAGAGCTTGA+TGG + chr5.4:54006076-54006095 MS.gene88705:CDS 40.0%
CTCCGCAAAATAGTGATGTA+GGG + chr5.4:54007442-54007461 MS.gene88705:CDS 40.0%
GAAAAACTTTCTGTTGGGCA+GGG + chr5.4:54008061-54008080 MS.gene88705:CDS 40.0%
GCATCACATGATTATCCAGA+GGG + chr5.4:54007414-54007433 MS.gene88705:CDS 40.0%
GGAAGATCAGCTGTTAAACT+TGG + chr5.4:54006861-54006880 MS.gene88705:intron 40.0%
GGGTCGAAAAACTTTCTGTT+GGG + chr5.4:54008056-54008075 MS.gene88705:CDS 40.0%
GTGACACTGGTATAAGGATA+AGG + chr5.4:54007769-54007788 MS.gene88705:CDS 40.0%
TACAACTGCAGAATCCAACT+TGG + chr5.4:54008034-54008053 MS.gene88705:CDS 40.0%
TACCTTGTGCTTGAATCACT+GGG - chr5.4:54007833-54007852 None:intergenic 40.0%
TCTTCTTCTGTCCAATGGAT+CGG + chr5.4:54005873-54005892 MS.gene88705:CDS 40.0%
TGAATCACTGGGTTCATGTT+TGG - chr5.4:54007822-54007841 None:intergenic 40.0%
TGGAAACGGTGATGAAGTTT+GGG + chr5.4:54004993-54005012 MS.gene88705:CDS 40.0%
TGGATAGTGACACTGGTATA+AGG + chr5.4:54007763-54007782 MS.gene88705:CDS 40.0%
TGTGGAAATGGCCAATATGA+TGG + chr5.4:54007143-54007162 MS.gene88705:CDS 40.0%
! AGGATTTTGGATAGTGACAC+TGG + chr5.4:54007756-54007775 MS.gene88705:CDS 40.0%
! CTCATCTTTTGTAGTCTCCT+CGG - chr5.4:54007907-54007926 None:intergenic 40.0%
!! AAAGTTTTTCGACCCCAAGT+TGG - chr5.4:54008051-54008070 None:intergenic 40.0%
!! TTGTTGATGATGGGGTTTGT+GGG + chr5.4:54005482-54005501 MS.gene88705:intron 40.0%
!! TTGTTGATGATGGGTTTGTG+GGG + chr5.4:54005338-54005357 MS.gene88705:intron 40.0%
!! TTGTTGATGATGGGTTTGTG+TGG + chr5.4:54005338-54005357 MS.gene88705:intron 40.0%
!! TTTGTTGATGATGGGGTTTG+TGG + chr5.4:54005481-54005500 MS.gene88705:intron 40.0%
!!! AAGACTCTTGTTTTCTACGC+TGG + chr5.4:54006004-54006023 MS.gene88705:CDS 40.0%
!!! CCATCAAGCTCTTTTAAGGT+AGG - chr5.4:54006079-54006098 None:intergenic 40.0%
!!! CTGACCCCTTTTTTTTGGTT+TGG + chr5.4:54007178-54007197 MS.gene88705:intron 40.0%
AACAAGCGACAGAGGACATA+TGG - chr5.4:54006428-54006447 None:intergenic 45.0%
AACCCAGTGATTCAAGCACA+AGG + chr5.4:54007828-54007847 MS.gene88705:CDS 45.0%
AAGTTCAAACTGTGGCGAAG+CGG + chr5.4:54006472-54006491 MS.gene88705:CDS 45.0%
AATGTGGGACATTGCTTCCT+CGG - chr5.4:54006630-54006649 None:intergenic 45.0%
ACAAGCGACAGAGGACATAT+GGG - chr5.4:54006427-54006446 None:intergenic 45.0%
ACAGATCTCTCTTGCTGACA+TGG - chr5.4:54008003-54008022 None:intergenic 45.0%
ACGATTTGAGCTTGAGCCAT+GGG + chr5.4:54006900-54006919 MS.gene88705:CDS 45.0%
AGATGAGAGTTTGCAGGAGA+CGG + chr5.4:54007920-54007939 MS.gene88705:CDS 45.0%
ATCGCTATAGCAATCAGCTG+TGG - chr5.4:54006657-54006676 None:intergenic 45.0%
ATGGCTCAAGCTCAAATCGT+GGG - chr5.4:54006900-54006919 None:intergenic 45.0%
CAACTGCAGAATCCAACTTG+GGG + chr5.4:54008036-54008055 MS.gene88705:CDS 45.0%
CAGATCTCTCTTGCTGACAT+GGG - chr5.4:54008002-54008021 None:intergenic 45.0%
CCTCCTAATCGTATTCTACG+CGG - chr5.4:54007861-54007880 None:intergenic 45.0%
CGAAAAACTTTCTGTTGGGC+AGG + chr5.4:54008060-54008079 MS.gene88705:CDS 45.0%
CGACGGTAAACACTCAACTA+CGG - chr5.4:54004860-54004879 None:intergenic 45.0%
CTACCTTGTGCTTGAATCAC+TGG - chr5.4:54007834-54007853 None:intergenic 45.0%
CTCCTAATCGTATTCTACGC+GGG - chr5.4:54007860-54007879 None:intergenic 45.0%
GCACACTTTCCACCAGAATT+TGG + chr5.4:54006949-54006968 MS.gene88705:CDS 45.0%
GCACCAAGGAGAATACGATT+GGG + chr5.4:54007657-54007676 MS.gene88705:CDS 45.0%
GCTTCTTAAACAAGCGACAG+AGG - chr5.4:54006436-54006455 None:intergenic 45.0%
GGGGTCGAAAAACTTTCTGT+TGG + chr5.4:54008055-54008074 MS.gene88705:CDS 45.0%
GTGGTTCTTCTTCTGTCCAA+TGG + chr5.4:54005868-54005887 MS.gene88705:CDS 45.0%
TAAGGAACAAGGATCCAGAG+TGG + chr5.4:54005849-54005868 MS.gene88705:CDS 45.0%
TACAATCTTACCTCTGCAGC+CGG - chr5.4:54006722-54006741 None:intergenic 45.0%
TCCACCAGAATTTGGCTATC+AGG + chr5.4:54006957-54006976 MS.gene88705:CDS 45.0%
TCCTAATCGTATTCTACGCG+GGG - chr5.4:54007859-54007878 None:intergenic 45.0%
TGAACAACCAGACATGAACC+CGG + chr5.4:54007614-54007633 MS.gene88705:CDS 45.0%
TGAACCGCGCAACAACTAAT+GGG + chr5.4:54005918-54005937 MS.gene88705:CDS 45.0%
TGCACCAAGGAGAATACGAT+TGG + chr5.4:54007656-54007675 MS.gene88705:CDS 45.0%
TGTAGTCTCCTCGGAAACAA+GGG - chr5.4:54007898-54007917 None:intergenic 45.0%
TTCGGATACTTCCGATCCAT+TGG - chr5.4:54005887-54005906 None:intergenic 45.0%
TTGAACCGCGCAACAACTAA+TGG + chr5.4:54005917-54005936 MS.gene88705:CDS 45.0%
TTGGCCTGATAGCCAAATTC+TGG - chr5.4:54006964-54006983 None:intergenic 45.0%
TTGTAGTCTCCTCGGAAACA+AGG - chr5.4:54007899-54007918 None:intergenic 45.0%
! ATTCTGGTGGAAAGTGTGCA+TGG - chr5.4:54006948-54006967 None:intergenic 45.0%
! GATAAAGGTACGCAGAGTTG+TGG - chr5.4:54006285-54006304 None:intergenic 45.0%
! GCGCAACAACTAATGGGTAT+TGG + chr5.4:54005924-54005943 MS.gene88705:CDS 45.0%
! TTCTGGTGGAAAGTGTGCAT+GGG - chr5.4:54006947-54006966 None:intergenic 45.0%
!! AAGTCTGGTGCTACCTTGAT+TGG + chr5.4:54005974-54005993 MS.gene88705:CDS 45.0%
!! ATGGATCGGAAGTATCCGAA+TGG + chr5.4:54005887-54005906 MS.gene88705:CDS 45.0%
!! GGTGCCATCAAGCTCTTTTA+AGG - chr5.4:54006083-54006102 None:intergenic 45.0%
!! TGGATCGGAAGTATCCGAAT+GGG + chr5.4:54005888-54005907 MS.gene88705:CDS 45.0%
!! TGTTGATGATGGGGTTTGTG+GGG + chr5.4:54005483-54005502 MS.gene88705:intron 45.0%
!! TGTTGATGATGGGTTTGTGG+GGG + chr5.4:54005339-54005358 MS.gene88705:intron 45.0%
!!! CAGCTCTGACCCCTTTTTTT+TGG + chr5.4:54007173-54007192 MS.gene88705:intron 45.0%
AAGACTGATAGACGCCTCAC+TGG - chr5.4:54007067-54007086 None:intergenic 50.0%
ACTTTCTGTTGGGCAGGGTT+CGG + chr5.4:54008066-54008085 MS.gene88705:CDS 50.0%
AGGCGACAGGAAAAGATCGA+AGG + chr5.4:54005948-54005967 MS.gene88705:CDS 50.0%
AGTTCTCAGGGATAGCTGCT+AGG - chr5.4:54006607-54006626 None:intergenic 50.0%
ATTGCTTCCTCGGAGTTCTC+AGG - chr5.4:54006620-54006639 None:intergenic 50.0%
CAATGAGTCCTCTTCCCCTT+CGG - chr5.4:54006037-54006056 None:intergenic 50.0%
CACCAGCGACAGAAGATGAA+AGG + chr5.4:54006579-54006598 MS.gene88705:CDS 50.0%
CACGATTTGAGCTTGAGCCA+TGG + chr5.4:54006899-54006918 MS.gene88705:CDS 50.0%
CACTGAACAAGCTGCCGTTA+GGG + chr5.4:54004911-54004930 MS.gene88705:CDS 50.0%
CATGGCTCAAGCTCAAATCG+TGG - chr5.4:54006901-54006920 None:intergenic 50.0%
CATTGGCCAAATGACCACTG+TGG + chr5.4:54007506-54007525 MS.gene88705:CDS 50.0%
CCAAGGAGAATACGATTGGG+AGG + chr5.4:54007660-54007679 MS.gene88705:CDS 50.0%
CCGCGTAGAATACGATTAGG+AGG + chr5.4:54007858-54007877 MS.gene88705:CDS 50.0%
CCTCCCAATCGTATTCTCCT+TGG - chr5.4:54007663-54007682 None:intergenic 50.0%
CGGTTCAATCTGCTCCCATT+CGG - chr5.4:54005905-54005924 None:intergenic 50.0%
CTCTTACCAGGCAAATCCCA+AGG - chr5.4:54005051-54005070 None:intergenic 50.0%
CTTCCTTGTGCTTGCATCAC+CGG - chr5.4:54007636-54007655 None:intergenic 50.0%
GAAGGGGAAGAGGACTCATT+GGG + chr5.4:54006036-54006055 MS.gene88705:CDS 50.0%
GACAGAGGACATATGGGTTC+TGG - chr5.4:54006421-54006440 None:intergenic 50.0%
GACATGGGAGATGTCTTCTC+TGG - chr5.4:54007987-54008006 None:intergenic 50.0%
GCCTGATAGCCAAATTCTGG+TGG - chr5.4:54006961-54006980 None:intergenic 50.0%
GCTGACTGAGTCAATGATGC+TGG + chr5.4:54006178-54006197 MS.gene88705:intron 50.0%
GGACAGAAGAAGAACCACTC+TGG - chr5.4:54005866-54005885 None:intergenic 50.0%
GGAGAGTAATTGGCAGTCGT+AGG - chr5.4:54006515-54006534 None:intergenic 50.0%
GGGAGATGTCTTCTCTGGAT+CGG - chr5.4:54007982-54008001 None:intergenic 50.0%
GGTGAGGAAGATAGAGGAAC+CGG - chr5.4:54006563-54006582 None:intergenic 50.0%
TCACTGAACAAGCTGCCGTT+AGG + chr5.4:54004910-54004929 MS.gene88705:CDS 50.0%
TCGGATACTGTTGTCGATGG+CGG + chr5.4:54007555-54007574 MS.gene88705:CDS 50.0%
TGCCTTTCATCTTCTGTCGC+TGG - chr5.4:54006584-54006603 None:intergenic 50.0%
TTCATCTTCTGTCGCTGGTG+AGG - chr5.4:54006579-54006598 None:intergenic 50.0%
TTCCTTGTGCTTGCATCACC+GGG - chr5.4:54007635-54007654 None:intergenic 50.0%
TTGCTTCCTCGGAGTTCTCA+GGG - chr5.4:54006619-54006638 None:intergenic 50.0%
TTTACCGTCGTCGCAACAAG+CGG + chr5.4:54004870-54004889 MS.gene88705:CDS 50.0%
TTTGAGCCTTGGGATTTGCC+TGG + chr5.4:54005042-54005061 MS.gene88705:CDS 50.0%
! AAGCACAAGGAAGTGCACCA+AGG + chr5.4:54007643-54007662 MS.gene88705:CDS 50.0%
! CAAGCATTCCCTTGTTTCCG+AGG + chr5.4:54007887-54007906 MS.gene88705:CDS 50.0%
! GCGGCACTGGAATTAGGATA+AGG + chr5.4:54007574-54007593 MS.gene88705:CDS 50.0%
!! AATGGGTATTGGAAGGCGAC+AGG + chr5.4:54005935-54005954 MS.gene88705:CDS 50.0%
!! CCTTGTTTCTGAGGAGACGA+CGG + chr5.4:54007698-54007717 MS.gene88705:CDS 50.0%
!! GTTGATGATGGGGTTTGTGG+GGG + chr5.4:54005484-54005503 MS.gene88705:intron 50.0%
!! TTTAGATGTACCGGCTGCAG+AGG + chr5.4:54006709-54006728 MS.gene88705:CDS 50.0%
AACCCGGTGATGCAAGCACA+AGG + chr5.4:54007630-54007649 MS.gene88705:CDS 55.0%
AGATGAGAGTGGACCTGTCC+AGG - chr5.4:54006109-54006128 None:intergenic 55.0%
AGCTATCCCTGAGAACTCCG+AGG + chr5.4:54006610-54006629 MS.gene88705:CDS 55.0%
CAGCACTCTCAGAAGCAGCA+TGG - chr5.4:54007959-54007978 None:intergenic 55.0%
CATCCTCGATTAGCGCGATG+CGG + chr5.4:54008102-54008121 MS.gene88705:CDS 55.0%
CCGTCGTCTCCTCAGAAACA+AGG - chr5.4:54007701-54007720 None:intergenic 55.0%
CGAAGGGGAAGAGGACTCAT+TGG + chr5.4:54006035-54006054 MS.gene88705:CDS 55.0%
CTGAGGAGACGACGGAAGAT+GGG + chr5.4:54007706-54007725 MS.gene88705:CDS 55.0%
GATGAGAGTGGACCTGTCCA+GGG - chr5.4:54006108-54006127 None:intergenic 55.0%
GCCCCGCGTAGAATACGATT+AGG + chr5.4:54007855-54007874 MS.gene88705:CDS 55.0%
GTCGCTGGTGAGGAAGATAG+AGG - chr5.4:54006569-54006588 None:intergenic 55.0%
TCAACAAGCTCCTCGTCGGT+AGG - chr5.4:54004949-54004968 None:intergenic 55.0%
TCTGAGGAGACGACGGAAGA+TGG + chr5.4:54007705-54007724 MS.gene88705:CDS 55.0%
TGCATCACCGGGTTCATGTC+TGG - chr5.4:54007624-54007643 None:intergenic 55.0%
TTGGGACGAGTTCTCCAGTG+AGG + chr5.4:54007050-54007069 MS.gene88705:CDS 55.0%
! CAGCGACTCGGATGTGGAAA+TGG + chr5.4:54007131-54007150 MS.gene88705:CDS 55.0%
! GTGGAAAGTGTGCATGGGCT+GGG - chr5.4:54006942-54006961 None:intergenic 55.0%
! TCGATGGCGGCACTGGAATT+AGG + chr5.4:54007568-54007587 MS.gene88705:CDS 55.0%
! TGGAAAGTGTGCATGGGCTG+GGG - chr5.4:54006941-54006960 None:intergenic 55.0%
! TTTTGCGGAGTCACTCCCTC+TGG - chr5.4:54007432-54007451 None:intergenic 55.0%
!! TGCGCGTTGCCTTGTTTCTG+AGG + chr5.4:54007689-54007708 MS.gene88705:CDS 55.0%
AAATGGGCCGTGCAGCGACT+CGG + chr5.4:54007119-54007138 MS.gene88705:CDS 60.0%
AGACCGCATCGCGCTAATCG+AGG - chr5.4:54008108-54008127 None:intergenic 60.0%
AGAGTGGACCTGTCCAGGGT+TGG - chr5.4:54006104-54006123 None:intergenic 60.0%
ATGGGGTTTGTGGGGGTGGA+GGG + chr5.4:54005491-54005510 MS.gene88705:intron 60.0%
TACGCTGGTCGTGCTCCGAA+GGG + chr5.4:54006019-54006038 MS.gene88705:CDS 60.0%
TCCACATCCGAGTCGCTGCA+CGG - chr5.4:54007129-54007148 None:intergenic 60.0%
TGATGGCACCAACCCTGGAC+AGG + chr5.4:54006093-54006112 MS.gene88705:CDS 60.0%
TGCCGTTAGGGTTCCGCTTC+CGG + chr5.4:54004923-54004942 MS.gene88705:CDS 60.0%
! ACTGTTGTCGATGGCGGCAC+TGG + chr5.4:54007561-54007580 MS.gene88705:CDS 60.0%
! GAGCTTGATGGCACCAACCC+TGG + chr5.4:54006088-54006107 MS.gene88705:CDS 60.0%
! GGTGGAAAGTGTGCATGGGC+TGG - chr5.4:54006943-54006962 None:intergenic 60.0%
! TCCTCCGCTTGTTGCGACGA+CGG - chr5.4:54004877-54004896 None:intergenic 60.0%
! TCGCTGCACGGCCCATTTTC+TGG - chr5.4:54007117-54007136 None:intergenic 60.0%
!! GATGATGGGGTTTGTGGGGG+TGG + chr5.4:54005487-54005506 MS.gene88705:intron 60.0%
!! GGGGGTGGAGGGTTTGTTGT+AGG + chr5.4:54005502-54005521 MS.gene88705:intron 60.0%
ACCGTCGTCGCAACAAGCGG+AGG + chr5.4:54004873-54004892 MS.gene88705:CDS 65.0%
ACGCTGGTCGTGCTCCGAAG+GGG + chr5.4:54006020-54006039 MS.gene88705:CDS 65.0%
CAAGCTCCTCGTCGGTAGGC+CGG - chr5.4:54004945-54004964 None:intergenic 65.0%
CTACGCTGGTCGTGCTCCGA+AGG + chr5.4:54006018-54006037 MS.gene88705:CDS 65.0%
GATGGGGTTTGTGGGGGTGG+AGG + chr5.4:54005490-54005509 MS.gene88705:intron 65.0%
GCAACAAGCGGAGGAGCTGG+CGG + chr5.4:54004882-54004901 MS.gene88705:CDS 65.0%
GGCCGGAAGCGGAACCCTAA+CGG - chr5.4:54004928-54004947 None:intergenic 65.0%
GTCGCAACAAGCGGAGGAGC+TGG + chr5.4:54004879-54004898 MS.gene88705:CDS 65.0%
GTCGTGCTCCGAAGGGGAAG+AGG + chr5.4:54006026-54006045 MS.gene88705:CDS 65.0%
CCTCGTCGGTAGGCCGGAAG+CGG - chr5.4:54004939-54004958 None:intergenic 70.0%
! GCCGTGCAGCGACTCGGATG+TGG + chr5.4:54007125-54007144 MS.gene88705:CDS 70.0%
CCGCTTCCGGCCTACCGACG+AGG + chr5.4:54004936-54004955 MS.gene88705:CDS 75.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 54004850 54008217 54004850 ID=MS.gene88705
chr5.4 mRNA 54004850 54008217 54004850 ID=MS.gene88705.t1;Parent=MS.gene88705
chr5.4 exon 54004850 54005063 54004850 ID=MS.gene88705.t1.exon1;Parent=MS.gene88705.t1
chr5.4 CDS 54004850 54005063 54004850 ID=cds.MS.gene88705.t1;Parent=MS.gene88705.t1
chr5.4 exon 54005837 54006114 54005837 ID=MS.gene88705.t1.exon2;Parent=MS.gene88705.t1
chr5.4 CDS 54005837 54006114 54005837 ID=cds.MS.gene88705.t1;Parent=MS.gene88705.t1
chr5.4 exon 54006422 54006730 54006422 ID=MS.gene88705.t1.exon3;Parent=MS.gene88705.t1
chr5.4 CDS 54006422 54006730 54006422 ID=cds.MS.gene88705.t1;Parent=MS.gene88705.t1
chr5.4 exon 54006862 54007164 54006862 ID=MS.gene88705.t1.exon4;Parent=MS.gene88705.t1
chr5.4 CDS 54006862 54007164 54006862 ID=cds.MS.gene88705.t1;Parent=MS.gene88705.t1
chr5.4 exon 54007405 54008217 54007405 ID=MS.gene88705.t1.exon5;Parent=MS.gene88705.t1
chr5.4 CDS 54007405 54008217 54007405 ID=cds.MS.gene88705.t1;Parent=MS.gene88705.t1
Gene Sequence

>MS.gene88705

ATGGGTGCCGTAGTTGAGTGTTTACCGTCGTCGCAACAAGCGGAGGAGCTGGCGGTTCTGTCACTGAACAAGCTGCCGTTAGGGTTCCGCTTCCGGCCTACCGACGAGGAGCTTGTTGATTTTTATCTGAGGATGAAGATTAATGGAAACGGTGATGAAGTTTGGGTTATTCGTGAAGTTGATGTTTGTAAATTTGAGCCTTGGGATTTGCCTGGTAAGAGATTTTTTTTATCTTTAACTGTTTCTTGAATTTAGGTTTTTGTTCTTTTGATGATTTGGACTGGTTTTGATTTGGATAAGTGATTGTTGTTGACTACATTTTGATTGTGATCGTTTGTGTTTGATATGTAAATTTATAAGTGGCTGTTATTTGATTTTGTTTTGTTTTACTGTTTCTGTGTAATTTAGCTTATTGAATGAGTTTTTTTTCATGAAAAAAATTTGATTTTTAAAGGTTAAACGTGGTTATGATATTTGATTTGATGATTTTGTTGATGATGGGTTTGTGGGGGATTTTTGTTGTAAGTTTATCAGTGGTAATGAACATTAGTTTTGTTGAAAATTAGGGAAAATTAATCTTGAATGGTTACGATATGATGAATTTGTTTTTGTCAATAGAAGATTTCATGGTTTTGTTGATGATGGGGTTTGTGGGGGTGGAGGGTTTGTTGTAGGTTTATCAGTAGTAGTGAATACTAATTTTGGTGAAATTTGGGGGAAATTAATTTTGTATGGTTAGATCATGTGGTTGTGGTATTTGATATGATGATTTTGTGTTATTGTTGACTGAAATTTCATGGTTTTGTTGATGATGGGTTTGTGTGGTGTTTTTGTTGTAGATTTATCAATGCCACTGAACAATAATTTTTTGTGAGAATTAATTTCGAATGGTTAGATCATGCGGTTATGGCATTTGATATGATGATTTTGTGTAAAAATTTCATAATTTTTGTTGATGATGGAGTTTATGTTTTTTTCTTTTTGTAGATTTATCGATCGTAAGGAACAAGGATCCAGAGTGGTTCTTCTTCTGTCCAATGGATCGGAAGTATCCGAATGGGAGCAGATTGAACCGCGCAACAACTAATGGGTATTGGAAGGCGACAGGAAAAGATCGAAGGATTAAGTCTGGTGCTACCTTGATTGGAATGAAGAAGACTCTTGTTTTCTACGCTGGTCGTGCTCCGAAGGGGAAGAGGACTCATTGGGTTATGCATGAGTATAGACCTACCTTAAAAGAGCTTGATGGCACCAACCCTGGACAGGTCCACTCTCATCTCCTTCTTTTTTTTATGTTTGGTTTTAGTGACTGATTTGAAGTATTTGTTGCTGACTGAGTCAATGATGCTGGTTTTTGTAACTTGATTTTAAATCTATATGTTCATACTTCATTGTGTTCCATAATTGTTTTCAACGCACTTCATTACATCTACCACAACTCTGCGTACCTTTATCTTGTCTTTGACTAATGTAAAGCTACTGTGATTTATGACTACCTAAGCAATTATAGATGTCAGTGATGATAATTAAATGTTTCTAACTTCTCTACATGGTTGATTTGACTTCTGCCAGAACCCATATGTCCTCTGTCGCTTGTTTAAGAAGCATGATGAGAGTCTTGAAAGTTCAAACTGTGGCGAAGCGGAGCAGACTACTTCAACTCCTACGACTGCCAATTACTCTCCAGAAGAAATACAGTCTGACCTAAATCCGGTTCCTCTATCTTCCTCACCAGCGACAGAAGATGAAAGGCACCTAGCAGCTATCCCTGAGAACTCCGAGGAAGCAATGTCCCACATTATAACCACAGCTGATTGCTATAGCGATGCATGTAATGCTTCTGATGCACAACATCAGAGTTTAGATGTACCGGCTGCAGAGGTAAGATTGTAACTGAGTTTAATCTTTTATTTGTCCTTTTCCTTTAATGTTTTATTTGAATGATCCTTCTATTGATTTGAAGTGACTGAATTTGTTGATTTCGTAACTATACTTGATGTTAACTATTTCAGGAAGATCAGCTGTTAAACTTGGACATATTTGATAGCCCACGATTTGAGCTTGAGCCATGGGATGATAAGTTATTCTCCCCAGCCCATGCACACTTTCCACCAGAATTTGGCTATCAGGCCAACAATGAATTAATTCAGTATGGTACAAACGGGACAGATGTTTCAGACTTTTTCAACTCGTGTGTTAATTGGGACGAGTTCTCCAGTGAGGCGTCTATCAGTCTTGATCTGAGCCCTACCATTTTTAAAATTCCAGAAAATGGGCCGTGCAGCGACTCGGATGTGGAAATGGCCAATATGATGGTTAGTAACAGCTCTGACCCCTTTTTTTTGGTTTGGTCATTCTAGATTTCTGCTATCAGAATGCAATTTGTTAGTTTCAGAACACATAGCGGCAGTTCTAACCTTTTTCTGTTAATGTTCTTAAGCTAATTGCCTTCTCTAATTGACACCTTAACACAAATTTTATTGTATATATGTGGGCATATTTAGCTATGTTTTCTAATACCATGGATATAATTTTAATCTGATTGTATGCTGCAGAATCTGCTAGCATCACATGATTATCCAGAGGGAGTGACTCCGCAAAATAGTGATGTAGGGTTGTTTCAGAACAATTCCCAGATGACTCTTTCTAATGATAGCATTGGCCAAATGACCACTGTGGTAAATGAATATGAGCAAATGTGGAATTCGGATACTGTTGTCGATGGCGGCACTGGAATTAGGATAAGGTCTAGACAAGGACAAAGTGAACAACCAGACATGAACCCGGTGATGCAAGCACAAGGAAGTGCACCAAGGAGAATACGATTGGGAGGATTTGTTGCGCGTTGCCTTGTTTCTGAGGAGACGACGGAAGATGGGAGTCGTGCAGCAGAATATGAACAATCGAGGATTTTGGATAGTGACACTGGTATAAGGATAAGGAGGACTCGACAAAGAAGAAATGAAGAGCCAAACATGAACCCAGTGATTCAAGCACAAGGTAGTGCCCCGCGTAGAATACGATTAGGAGGATTTGTCAAGCATTCCCTTGTTTCCGAGGAGACTACAAAAGATGAGAGTTTGCAGGAGACGGAAGCTTCAGAAAACCATGCTGCTTCTGAGAGTGCTGCCGATCCAGAGAAGACATCTCCCATGTCAGCAAGAGAGATCTGTGAGCAACATGTTACAACTGCAGAATCCAACTTGGGGTCGAAAAACTTTCTGTTGGGCAGGGTTCGGTGCACTTCAAAGACATCCTCGATTAGCGCGATGCGGTCTACTGTTCTTGCATATTCTGCCATTGTAATGGTTTCGCTAGTATTGCTTGTTAATATTTGGGGATATCTTAGATTTAGAAATGCTTACTAG
Protein sequence

>MS.gene88705.t1

MGAVVECLPSSQQAEELAVLSLNKLPLGFRFRPTDEELVDFYLRMKINGNGDEVWVIREVDVCKFEPWDLPDLSIVRNKDPEWFFFCPMDRKYPNGSRLNRATTNGYWKATGKDRRIKSGATLIGMKKTLVFYAGRAPKGKRTHWVMHEYRPTLKELDGTNPGQNPYVLCRLFKKHDESLESSNCGEAEQTTSTPTTANYSPEEIQSDLNPVPLSSSPATEDERHLAAIPENSEEAMSHIITTADCYSDACNASDAQHQSLDVPAAEEDQLLNLDIFDSPRFELEPWDDKLFSPAHAHFPPEFGYQANNELIQYGTNGTDVSDFFNSCVNWDEFSSEASISLDLSPTIFKIPENGPCSDSDVEMANMMNLLASHDYPEGVTPQNSDVGLFQNNSQMTLSNDSIGQMTTVVNEYEQMWNSDTVVDGGTGIRIRSRQGQSEQPDMNPVMQAQGSAPRRIRLGGFVARCLVSEETTEDGSRAAEYEQSRILDSDTGIRIRRTRQRRNEEPNMNPVIQAQGSAPRRIRLGGFVKHSLVSEETTKDESLQETEASENHAASESAADPEKTSPMSAREICEQHVTTAESNLGSKNFLLGRVRCTSKTSSISAMRSTVLAYSAIVMVSLVLLVNIWGYLRFRNAY