AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene89422

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89422.t1 MTR_3g045430 89.610 308 13 2 1 299 1 298 0.0 526
MS.gene89422.t1 MTR_6g009430 36.599 347 161 9 1 299 1 336 5.55e-59 192
MS.gene89422.t1 MTR_3g461490 61.314 137 50 3 1 136 1 135 9.77e-51 170
MS.gene89422.t1 MTR_7g011170 55.039 129 57 1 1 129 1 128 1.77e-43 151
MS.gene89422.t1 MTR_2g011660 48.837 129 66 0 1 129 1 129 3.31e-43 151
MS.gene89422.t1 MTR_4g091490 48.507 134 69 0 1 134 1 134 1.14e-42 150
MS.gene89422.t1 MTR_1g085040 51.471 136 65 1 1 136 1 135 1.32e-41 147
MS.gene89422.t1 MTR_4g082290 45.455 176 85 3 1 166 1 175 1.95e-41 148
MS.gene89422.t1 MTR_1g112760 50.769 130 64 0 1 130 1 130 2.90e-41 143
MS.gene89422.t1 MTR_1g085640 51.880 133 63 1 1 133 1 132 4.35e-41 147
MS.gene89422.t1 MTR_7g110830 51.128 133 64 1 1 133 1 132 7.39e-41 145
MS.gene89422.t1 MTR_4g102380 50.758 132 64 1 1 132 1 131 8.44e-41 143
MS.gene89422.t1 MTR_6g012690 51.938 129 61 1 1 129 1 128 1.84e-40 144
MS.gene89422.t1 MTR_3g077110 51.613 124 60 0 7 130 6 129 9.30e-40 142
MS.gene89422.t1 MTR_4g082230 44.318 176 87 3 1 166 1 175 1.01e-39 143
MS.gene89422.t1 MTR_5g029840 49.612 129 64 1 1 129 1 128 2.51e-39 140
MS.gene89422.t1 MTR_3g074520 48.148 135 69 1 1 135 1 134 4.00e-39 140
MS.gene89422.t1 MTR_4g073420 46.617 133 70 1 1 133 1 132 7.95e-39 138
MS.gene89422.t1 MTR_5g007370 36.123 227 126 5 1 226 1 209 9.17e-39 138
MS.gene89422.t1 MTR_4g105130 50.000 132 65 1 1 132 1 131 1.15e-38 139
MS.gene89422.t1 MTR_4g478180 48.837 129 66 0 1 129 1 129 1.34e-38 139
MS.gene89422.t1 MTR_5g078140 48.855 131 66 1 1 131 1 130 2.23e-38 138
MS.gene89422.t1 MTR_3g065440 48.529 136 69 1 1 136 1 135 4.24e-38 137
MS.gene89422.t1 MTR_7g076740 47.794 136 69 2 1 135 1 135 4.81e-38 136
MS.gene89422.t1 MTR_2g089620 46.512 129 68 1 1 129 1 128 4.95e-38 137
MS.gene89422.t1 MTR_8g095390 47.368 133 69 1 1 133 1 132 1.22e-37 135
MS.gene89422.t1 MTR_4g057635 53.846 130 56 4 1 128 1 128 4.04e-37 134
MS.gene89422.t1 MTR_5g079670 42.581 155 84 2 2 156 1 150 5.93e-37 131
MS.gene89422.t1 MTR_3g097450 46.565 131 69 1 1 131 1 130 6.56e-37 133
MS.gene89422.t1 MTR_8g031360 47.727 132 68 1 1 131 1 132 1.00e-36 133
MS.gene89422.t1 MTR_2g064160 48.000 125 65 0 7 131 5 129 2.95e-36 132
MS.gene89422.t1 MTR_7g111290 52.273 132 62 1 1 132 1 131 4.15e-36 133
MS.gene89422.t1 MTR_4g485530 46.032 126 68 0 2 127 1 126 6.00e-36 128
MS.gene89422.t1 MTR_3g103570 54.237 118 52 2 1 117 1 117 8.19e-36 132
MS.gene89422.t1 MTR_5g042030 47.899 119 62 0 13 131 7 125 8.91e-36 130
MS.gene89422.t1 MTR_5g014990 53.390 118 53 2 1 117 1 117 1.03e-35 130
MS.gene89422.t1 MTR_0008s0390 48.276 116 60 0 1 116 1 116 1.23e-35 129
MS.gene89422.t1 MTR_0251s0050 46.721 122 65 0 1 122 1 122 1.63e-35 129
MS.gene89422.t1 MTR_1g017000 55.462 119 49 4 1 117 1 117 2.20e-35 128
MS.gene89422.t1 MTR_1g017140 52.542 118 54 2 1 117 1 117 4.42e-35 130
MS.gene89422.t1 MTR_3g083540 46.774 124 66 0 7 130 35 158 1.20e-34 127
MS.gene89422.t1 MTR_7g102110 52.893 121 55 2 1 120 1 120 4.80e-34 125
MS.gene89422.t1 MTR_0008s0470 47.414 116 61 0 1 116 1 116 5.45e-34 125
MS.gene89422.t1 MTR_1g076150 51.261 119 57 1 1 119 1 118 5.73e-34 124
MS.gene89422.t1 MTR_1g043080 48.718 117 59 1 1 117 1 116 1.53e-33 123
MS.gene89422.t1 MTR_4g121460 49.573 117 58 1 1 117 1 116 1.58e-33 125
MS.gene89422.t1 MTR_1g100653 47.899 119 61 1 1 119 1 118 1.68e-33 124
MS.gene89422.t1 MTR_1g043050 47.863 117 60 1 1 117 1 116 2.61e-33 123
MS.gene89422.t1 MTR_8g017440 44.681 141 71 2 1 135 1 140 5.64e-33 124
MS.gene89422.t1 MTR_6g090405 52.991 117 53 2 1 116 1 116 1.11e-32 121
MS.gene89422.t1 MTR_8g017540 46.099 141 74 2 1 141 47 185 2.39e-32 123
MS.gene89422.t1 MTR_2g089450 44.444 117 64 1 1 117 1 116 5.08e-32 119
MS.gene89422.t1 MTR_8g098860 47.321 112 59 0 6 117 5 116 6.99e-32 120
MS.gene89422.t1 MTR_4g097570 51.351 111 52 2 1 110 1 110 9.80e-32 120
MS.gene89422.t1 MTR_7g117730 47.009 117 61 1 1 117 1 116 1.02e-31 119
MS.gene89422.t1 MTR_3g039990 49.167 120 60 1 1 120 2 120 1.14e-31 120
MS.gene89422.t1 MTR_4g125520 45.833 120 64 1 1 120 1 119 1.47e-31 119
MS.gene89422.t1 MTR_8g017500 43.571 140 78 1 2 141 1 139 1.48e-31 120
MS.gene89422.t1 MTR_7g010210 49.593 123 59 2 1 121 1 122 1.50e-31 119
MS.gene89422.t1 MTR_2g099740 45.113 133 72 1 1 133 1 132 1.57e-31 121
MS.gene89422.t1 MTR_2g095520 50.893 112 53 2 1 111 1 111 1.66e-31 120
MS.gene89422.t1 MTR_7g010210 49.593 123 59 2 1 121 1 122 2.39e-31 119
MS.gene89422.t1 MTR_2g034790 47.009 117 61 1 1 117 1 116 3.35e-31 119
MS.gene89422.t1 MTR_7g087130 47.619 126 63 2 1 124 1 125 6.46e-31 118
MS.gene89422.t1 MTR_7g096930 47.059 119 62 1 1 119 1 118 8.45e-31 117
MS.gene89422.t1 MTR_8g027345 45.378 119 64 1 1 119 1 118 1.10e-30 117
MS.gene89422.t1 MTR_0140s0030 48.739 119 60 1 1 119 2 119 1.42e-30 117
MS.gene89422.t1 MTR_0489s0020 48.739 119 60 1 1 119 2 119 1.42e-30 117
MS.gene89422.t1 MTR_2g089420 44.444 117 63 2 1 117 1 115 1.58e-30 119
MS.gene89422.t1 MTR_7g115650 46.218 119 63 1 1 119 1 118 3.07e-30 113
MS.gene89422.t1 MTR_1g100667 45.299 117 63 1 14 130 14 129 3.31e-30 115
MS.gene89422.t1 MTR_4g128670 50.893 112 53 2 1 111 1 111 3.55e-30 117
MS.gene89422.t1 MTR_4g097570 50.893 112 52 3 1 110 1 111 4.43e-30 115
MS.gene89422.t1 MTR_5g010020 47.170 106 56 0 6 111 5 110 6.36e-30 116
MS.gene89422.t1 MTR_0063s0090 44.737 114 62 1 1 114 1 113 9.89e-30 112
MS.gene89422.t1 MTR_6g012180 49.550 111 55 1 1 111 1 110 2.07e-29 114
MS.gene89422.t1 MTR_1g086530 45.690 116 63 0 8 123 28 143 1.46e-28 111
MS.gene89422.t1 MTR_4g100720 44.248 113 63 0 12 124 12 124 1.74e-28 108
MS.gene89422.t1 MTR_6g055910 48.113 106 55 0 11 116 12 117 1.95e-28 110
MS.gene89422.t1 MTR_8g017390 40.000 190 108 6 1 189 1 185 2.25e-28 114
MS.gene89422.t1 MTR_1g045610 49.524 105 53 0 12 116 20 124 3.79e-28 109
MS.gene89422.t1 MTR_3g011610 43.478 115 65 0 2 116 26 140 5.20e-28 113
MS.gene89422.t1 MTR_8g017340 44.275 131 70 3 1 130 1 129 6.98e-28 112
MS.gene89422.t1 MTR_2g097910 42.593 108 62 0 13 120 20 127 1.27e-27 109
MS.gene89422.t1 MTR_1g110460 44.144 111 62 0 13 123 26 136 1.27e-27 109
MS.gene89422.t1 MTR_2g067420 46.789 109 57 1 3 111 5 112 1.95e-27 109
MS.gene89422.t1 MTR_3g052430 44.860 107 59 0 13 119 41 147 2.73e-27 111
MS.gene89422.t1 MTR_8g017350 44.000 125 68 2 1 124 1 124 3.36e-27 111
MS.gene89422.t1 MTR_4g065017 40.164 122 73 0 2 123 6 127 4.88e-27 108
MS.gene89422.t1 MTR_0247s0040 45.192 104 57 0 11 114 5 108 7.40e-27 103
MS.gene89422.t1 MTR_7g035075 41.026 117 69 0 3 119 4 120 1.04e-26 104
MS.gene89422.t1 MTR_5g079120 41.379 116 68 0 2 117 50 165 1.14e-26 106
MS.gene89422.t1 MTR_8g042410 42.593 108 62 0 9 116 33 140 1.61e-26 109
MS.gene89422.t1 MTR_0008s0280 41.739 115 66 1 1 115 1 114 1.64e-26 104
MS.gene89422.t1 MTR_1g073170 46.602 103 55 0 14 116 21 123 1.75e-26 105
MS.gene89422.t1 MTR_3g052450 42.991 107 61 0 13 119 40 146 2.41e-26 108
MS.gene89422.t1 MTR_8g020490 42.857 119 63 1 1 119 1 114 2.76e-26 104
MS.gene89422.t1 MTR_6g006030 43.519 108 61 0 13 120 14 121 2.85e-26 103
MS.gene89422.t1 MTR_3g028740 43.925 107 60 0 11 117 20 126 2.99e-26 106
MS.gene89422.t1 MTR_5g078800 43.636 110 62 0 8 117 2 111 6.04e-26 103
MS.gene89422.t1 MTR_1g086510 38.931 131 79 1 4 134 12 141 6.30e-26 103
MS.gene89422.t1 MTR_5g079220 42.202 109 63 0 9 117 17 125 1.57e-25 102
MS.gene89422.t1 MTR_5g078860 43.636 110 62 0 8 117 2 111 1.91e-25 103
MS.gene89422.t1 MTR_4g063100 43.519 108 61 0 12 119 6 113 1.97e-25 102
MS.gene89422.t1 MTR_7g111290 59.091 88 36 0 45 132 2 89 2.82e-25 103
MS.gene89422.t1 MTR_0193s0090 42.056 107 62 0 11 117 5 111 3.96e-25 100
MS.gene89422.t1 MTR_5g078930 44.144 111 61 1 7 116 2 112 4.20e-25 100
MS.gene89422.t1 MTR_1g062940 43.810 105 59 0 13 117 6 110 5.91e-25 100
MS.gene89422.t1 MTR_5g079290 41.905 105 61 0 13 117 17 121 8.56e-25 100
MS.gene89422.t1 MTR_1g083630 43.636 110 61 1 13 122 12 120 1.04e-24 104
MS.gene89422.t1 MTR_8g060940 42.453 106 61 0 8 113 2 107 1.59e-24 99.4
MS.gene89422.t1 MTR_5g078910 41.818 110 64 0 8 117 2 111 1.77e-24 100
MS.gene89422.t1 MTR_5g016510 32.828 198 120 5 15 203 5 198 3.58e-24 100
MS.gene89422.t1 MTR_7g109320 45.299 117 63 1 1 117 1 116 4.03e-24 100
MS.gene89422.t1 MTR_1g021230 44.231 104 58 0 13 116 57 160 4.24e-24 101
MS.gene89422.t1 MTR_5g078950 43.689 103 58 0 12 114 6 108 8.44e-24 98.2
MS.gene89422.t1 MTR_3g101290 40.625 128 66 2 15 142 37 154 1.01e-23 97.1
MS.gene89422.t1 MTR_2g096380 43.269 104 59 0 13 116 6 109 1.19e-23 97.1
MS.gene89422.t1 MTR_5g088610 33.951 162 72 4 14 141 10 170 2.82e-23 98.2
MS.gene89422.t1 MTR_0001s0360 41.905 105 61 0 13 117 7 111 4.25e-23 95.9
MS.gene89422.t1 MTR_5g488170 39.286 112 66 2 14 124 13 123 5.43e-23 95.5
MS.gene89422.t1 MTR_0197s0010 43.925 107 60 0 17 123 5 111 5.72e-23 95.1
MS.gene89422.t1 MTR_7g017260 42.056 107 60 1 13 117 25 131 7.06e-23 95.9
MS.gene89422.t1 MTR_5g088080 39.286 112 66 2 14 124 13 123 7.68e-23 95.5
MS.gene89422.t1 MTR_5g088150 39.286 112 66 2 14 124 13 123 7.68e-23 95.5
MS.gene89422.t1 MTR_5g488210 39.286 112 66 2 14 124 13 123 7.68e-23 95.5
MS.gene89422.t1 MTR_5g088640 39.286 112 66 2 14 124 13 123 7.90e-23 95.5
MS.gene89422.t1 MTR_5g062790 40.179 112 65 2 14 124 10 120 2.20e-22 95.1
MS.gene89422.t1 MTR_4g019370 43.411 129 63 6 15 142 38 157 2.56e-22 95.5
MS.gene89422.t1 MTR_2g088170 43.269 104 59 0 13 116 29 132 3.51e-22 96.3
MS.gene89422.t1 MTR_2g033170 41.525 118 68 1 13 130 24 140 5.12e-22 94.4
MS.gene89422.t1 MTR_8g006470 39.450 109 64 2 13 120 10 117 1.22e-20 89.7
MS.gene89422.t1 MTR_4g123040 40.476 126 74 1 5 130 16 140 3.06e-20 89.4
MS.gene89422.t1 MTR_4g029540 40.566 106 62 1 11 115 8 113 3.13e-20 89.0
MS.gene89422.t1 MTR_4g063100 52.000 75 36 0 45 119 10 84 3.36e-20 87.4
MS.gene89422.t1 MTR_6g015455 41.441 111 64 1 15 125 5 114 3.52e-20 91.3
MS.gene89422.t1 MTR_4g094982 38.462 104 63 1 15 118 5 107 1.73e-19 86.3
MS.gene89422.t1 MTR_5g070020 34.188 117 76 1 3 119 110 225 2.12e-19 87.4
MS.gene89422.t1 MTR_6g055910 53.521 71 33 0 46 116 18 88 2.20e-19 85.9
MS.gene89422.t1 MTR_6g074860 35.294 136 79 4 12 146 1 128 7.89e-19 84.0
MS.gene89422.t1 MTR_5g041570 38.393 112 66 3 9 119 128 237 2.01e-18 85.5
MS.gene89422.t1 MTR_3g463400 36.154 130 78 4 11 137 130 257 2.32e-18 85.1
MS.gene89422.t1 MTR_4g128190 30.159 189 101 4 4 179 2 172 2.38e-18 82.8
MS.gene89422.t1 MTR_2g096380 46.914 81 43 0 36 116 10 90 2.49e-18 82.0
MS.gene89422.t1 MTR_4g105660 32.479 117 78 1 3 119 168 283 3.77e-18 84.3
MS.gene89422.t1 MTR_4g082040 37.615 109 65 3 12 119 102 208 8.04e-18 83.6
MS.gene89422.t1 MTR_3g089045 40.351 114 65 3 4 116 5 116 1.89e-17 81.3
MS.gene89422.t1 MTR_3g077650 34.286 105 68 1 15 119 181 284 4.41e-17 81.3
MS.gene89422.t1 MTR_5g082910 36.364 110 69 1 4 113 8 116 8.88e-17 79.3
MS.gene89422.t1 MTR_7g061330 39.815 108 64 1 10 117 72 178 1.09e-16 80.5
MS.gene89422.t1 MTR_7g061330 39.815 108 64 1 10 117 108 214 1.23e-16 80.5
MS.gene89422.t1 MTR_7g461410 39.815 108 64 1 10 117 108 214 1.23e-16 80.5
MS.gene89422.t1 MTR_7g086960 41.748 103 57 3 15 116 89 189 4.12e-16 78.2
MS.gene89422.t1 MTR_5g049190 33.945 109 71 1 11 119 15 122 7.66e-16 75.9
MS.gene89422.t1 MTR_1g085880 38.053 113 68 2 5 115 3 115 1.67e-15 73.9
MS.gene89422.t1 MTR_3g110028 34.259 108 70 1 10 117 80 186 2.22e-15 77.0
MS.gene89422.t1 MTR_7g037260 32.692 104 69 1 13 116 143 245 2.68e-15 75.9
MS.gene89422.t1 MTR_6g027370 37.383 107 64 3 15 120 99 203 3.74e-15 75.1
MS.gene89422.t1 MTR_6g027340 34.615 104 65 3 9 111 10 111 3.89e-15 73.2
MS.gene89422.t1 MTR_1g085770 38.053 113 68 2 5 115 3 115 4.63e-15 74.7
MS.gene89422.t1 MTR_7g035350 35.000 100 63 2 12 111 223 320 5.84e-15 75.1
MS.gene89422.t1 MTR_5g007300 39.241 79 48 0 11 89 62 140 7.14e-15 70.9
MS.gene89422.t1 MTR_1g026870 33.333 108 71 1 10 117 80 186 9.33e-15 75.1
MS.gene89422.t1 MTR_7g451170 31.373 102 69 1 15 116 191 291 1.61e-14 73.6
MS.gene89422.t1 MTR_6g027360 34.615 104 65 3 9 111 72 173 2.14e-14 72.8
MS.gene89422.t1 MTR_7g037130 33.945 109 66 2 13 116 143 250 8.72e-14 71.2
MS.gene89422.t1 MTR_4g088015 29.907 107 74 1 9 115 215 320 4.66e-13 69.3
MS.gene89422.t1 MTR_7g450950 28.682 129 91 1 9 137 151 278 6.09e-13 68.6
MS.gene89422.t1 MTR_1g057980 31.313 99 67 1 13 111 78 175 1.42e-12 67.4
MS.gene89422.t1 MTR_5g010650 39.000 100 57 4 12 110 108 204 1.50e-12 68.2
MS.gene89422.t1 MTR_4g063100 55.102 49 22 0 71 119 1 49 1.59e-12 65.5
MS.gene89422.t1 MTR_5g007310 47.619 84 23 4 99 163 6 87 2.30e-12 65.9
MS.gene89422.t1 MTR_6g055910 58.696 46 19 0 71 116 2 47 3.16e-12 65.1
MS.gene89422.t1 MTR_7g061550 29.545 132 85 3 15 138 7 138 6.73e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89422.t1 AT3G28470 40.909 330 144 11 1 295 1 314 4.61e-58 189
MS.gene89422.t1 AT5G56110 60.584 137 51 3 1 136 1 135 1.65e-50 169
MS.gene89422.t1 AT1G18960 36.716 335 148 13 1 299 1 307 1.61e-48 164
MS.gene89422.t1 AT4G21440 49.254 134 67 1 1 134 1 133 1.42e-42 150
MS.gene89422.t1 AT5G15310 53.488 129 59 1 1 129 1 128 2.54e-42 146
MS.gene89422.t1 AT4G17785 51.938 129 62 0 1 129 1 129 7.59e-42 148
MS.gene89422.t1 AT4G05100 48.837 129 66 0 1 129 1 129 8.76e-42 147
MS.gene89422.t1 AT3G01140 53.906 128 58 1 1 128 1 127 1.06e-41 147
MS.gene89422.t1 AT4G17785 51.938 129 62 0 1 129 1 129 1.07e-41 147
MS.gene89422.t1 AT5G15310 53.488 129 59 1 1 129 1 128 1.54e-41 146
MS.gene89422.t1 AT5G15310 53.488 129 59 1 1 129 1 128 1.55e-41 146
MS.gene89422.t1 AT1G57560 43.529 170 86 3 1 165 1 165 2.90e-41 145
MS.gene89422.t1 AT1G57560 50.758 132 64 1 1 132 1 131 3.29e-41 144
MS.gene89422.t1 AT4G28110 49.612 129 64 1 1 129 1 128 4.42e-41 144
MS.gene89422.t1 AT3G01140 53.125 128 59 1 1 128 44 170 9.68e-41 145
MS.gene89422.t1 AT1G18710 48.872 133 62 1 13 139 12 144 1.07e-40 142
MS.gene89422.t1 AT5G61420 49.600 125 63 0 7 131 6 130 3.00e-40 144
MS.gene89422.t1 AT4G34990 49.242 132 66 1 1 132 1 131 5.91e-40 140
MS.gene89422.t1 AT5G16770 50.388 129 63 1 1 129 1 128 7.42e-40 142
MS.gene89422.t1 AT5G16770 50.388 129 63 1 1 129 1 128 7.42e-40 142
MS.gene89422.t1 AT4G01680 49.624 133 66 1 1 133 1 132 8.03e-40 139
MS.gene89422.t1 AT5G07690 50.400 125 62 0 7 131 6 130 8.71e-40 142
MS.gene89422.t1 AT1G74430 52.137 117 56 0 13 129 12 128 9.62e-40 140
MS.gene89422.t1 AT5G26660 51.538 130 62 1 1 130 1 129 1.03e-39 142
MS.gene89422.t1 AT5G16770 50.388 129 63 1 1 129 1 128 1.13e-39 142
MS.gene89422.t1 AT5G16770 50.388 129 63 1 1 129 1 128 1.13e-39 142
MS.gene89422.t1 AT5G65230 49.612 129 64 1 1 129 1 128 1.19e-39 141
MS.gene89422.t1 AT1G09540 51.128 133 64 1 1 133 1 132 2.09e-39 142
MS.gene89422.t1 AT3G02940 49.612 129 64 1 1 129 1 128 2.74e-39 140
MS.gene89422.t1 AT1G18570 48.855 131 67 0 1 131 1 131 2.81e-39 141
MS.gene89422.t1 AT4G01680 49.624 133 66 1 1 133 1 132 2.98e-39 140
MS.gene89422.t1 AT5G60890 49.231 130 65 1 1 130 1 129 3.13e-39 139
MS.gene89422.t1 AT3G02940 49.612 129 64 1 1 129 1 128 3.99e-39 140
MS.gene89422.t1 AT3G02940 49.612 129 64 1 1 129 1 128 3.99e-39 140
MS.gene89422.t1 AT1G34670 48.889 135 68 1 1 135 1 134 4.83e-39 140
MS.gene89422.t1 AT5G10280 36.150 213 121 3 5 212 4 206 5.26e-39 140
MS.gene89422.t1 AT1G66230 48.855 131 66 1 1 131 1 130 7.19e-39 138
MS.gene89422.t1 AT5G07700 51.261 119 58 0 13 131 12 130 1.10e-38 139
MS.gene89422.t1 AT5G07700 51.261 119 58 0 13 131 12 130 1.10e-38 139
MS.gene89422.t1 AT4G12350 47.059 136 71 1 1 136 1 135 2.67e-38 137
MS.gene89422.t1 AT3G13540 49.219 128 65 0 3 130 13 140 3.97e-38 135
MS.gene89422.t1 AT5G54230 50.000 122 61 0 13 134 12 133 8.90e-38 136
MS.gene89422.t1 AT4G38620 46.923 130 68 1 1 130 1 129 1.56e-37 135
MS.gene89422.t1 AT4G22680 46.970 132 69 1 1 132 1 131 4.20e-37 133
MS.gene89422.t1 AT2G16720 47.656 128 66 1 1 128 1 127 4.28e-37 133
MS.gene89422.t1 AT1G35515 48.819 127 64 1 1 127 1 126 1.39e-36 130
MS.gene89422.t1 AT1G74080 46.154 130 69 1 1 130 1 129 2.13e-36 133
MS.gene89422.t1 AT3G61250 46.923 130 68 1 1 130 1 129 2.68e-36 132
MS.gene89422.t1 AT5G16600 42.169 166 95 1 1 166 1 165 3.49e-36 132
MS.gene89422.t1 AT4G01680 45.517 145 66 2 1 133 1 144 6.53e-36 132
MS.gene89422.t1 AT1G22640 46.094 128 68 1 1 128 1 127 7.31e-36 129
MS.gene89422.t1 AT4G09460 46.875 128 67 1 1 128 1 127 1.30e-35 128
MS.gene89422.t1 AT5G14750 51.282 117 57 0 2 118 5 121 2.11e-35 127
MS.gene89422.t1 AT4G37780 53.390 118 53 2 1 117 1 117 2.82e-35 129
MS.gene89422.t1 AT5G14340 46.617 133 70 1 1 133 13 144 2.98e-35 129
MS.gene89422.t1 AT5G62320 44.526 137 68 2 3 132 4 139 1.32e-34 126
MS.gene89422.t1 AT3G49690 53.390 118 53 2 1 117 1 117 2.40e-34 127
MS.gene89422.t1 AT5G23000 54.622 119 50 4 1 117 1 117 1.15e-33 125
MS.gene89422.t1 AT5G57620 51.695 118 55 2 1 117 1 117 1.47e-33 125
MS.gene89422.t1 AT3G27920 48.276 116 60 0 2 117 3 118 1.94e-33 122
MS.gene89422.t1 AT5G40330 52.381 105 50 0 14 118 13 117 2.47e-33 122
MS.gene89422.t1 AT3G12720 47.934 121 62 1 7 127 17 136 3.24e-33 124
MS.gene89422.t1 AT2G36890 50.388 129 60 4 1 127 1 127 3.34e-33 124
MS.gene89422.t1 AT5G52600 45.038 131 63 1 8 129 7 137 5.05e-33 120
MS.gene89422.t1 AT2G36890 50.388 129 60 4 1 127 42 168 7.54e-33 124
MS.gene89422.t1 AT5G65790 50.847 118 56 2 1 117 1 117 8.30e-33 124
MS.gene89422.t1 AT1G79180 52.137 117 55 1 3 119 5 120 9.58e-33 122
MS.gene89422.t1 AT3G23250 50.427 117 57 1 1 117 1 116 1.34e-32 122
MS.gene89422.t1 AT2G47460 45.522 134 72 1 1 134 1 133 5.04e-32 122
MS.gene89422.t1 AT1G16490 50.000 116 57 1 3 118 5 119 5.63e-32 120
MS.gene89422.t1 AT3G47600 50.000 120 59 1 1 120 1 119 6.46e-32 121
MS.gene89422.t1 AT3G28910 48.780 123 62 1 1 123 1 122 1.09e-31 120
MS.gene89422.t1 AT5G62470 50.833 120 58 1 1 120 1 119 1.21e-31 120
MS.gene89422.t1 AT3G62610 49.573 117 58 1 1 117 1 116 1.60e-31 120
MS.gene89422.t1 AT1G63910 43.548 124 70 0 6 129 5 128 1.85e-31 120
MS.gene89422.t1 AT3G13890 48.718 117 59 1 1 117 1 116 3.79e-31 119
MS.gene89422.t1 AT5G49330 48.718 117 59 1 1 117 1 116 5.55e-31 119
MS.gene89422.t1 AT2G31180 48.739 119 60 1 1 119 1 118 6.13e-31 116
MS.gene89422.t1 AT1G06180 49.573 117 58 1 1 117 1 116 1.13e-30 115
MS.gene89422.t1 AT1G74650 50.000 120 59 1 1 120 1 119 1.15e-30 117
MS.gene89422.t1 AT1G56160 48.276 116 59 1 3 118 5 119 1.53e-30 117
MS.gene89422.t1 AT5G55020 48.148 108 56 0 12 119 25 132 2.52e-30 120
MS.gene89422.t1 AT3G12820 48.696 115 59 0 3 117 4 118 2.89e-30 114
MS.gene89422.t1 AT1G08810 48.739 119 60 1 1 119 1 118 4.61e-30 115
MS.gene89422.t1 AT5G62470 50.833 120 57 2 1 120 1 118 1.27e-29 115
MS.gene89422.t1 AT5G26660 54.839 93 42 0 38 130 6 98 1.35e-29 114
MS.gene89422.t1 AT4G26930 48.077 104 54 0 12 115 18 121 1.39e-29 116
MS.gene89422.t1 AT5G35550 41.739 115 67 0 3 117 4 118 1.91e-29 113
MS.gene89422.t1 AT5G12870 46.296 108 58 0 13 120 18 125 2.68e-29 113
MS.gene89422.t1 AT2G47190 42.500 120 69 0 4 123 11 130 2.42e-28 110
MS.gene89422.t1 AT3G13890 45.238 126 59 2 1 117 1 125 2.47e-28 112
MS.gene89422.t1 AT3G11440 44.444 108 60 0 9 116 37 144 2.92e-28 113
MS.gene89422.t1 AT3G11440 44.444 108 60 0 9 116 37 144 8.37e-28 113
MS.gene89422.t1 AT3G11440 44.444 108 60 0 9 116 37 144 8.37e-28 113
MS.gene89422.t1 AT3G11440 44.444 108 60 0 9 116 37 144 8.37e-28 113
MS.gene89422.t1 AT2G32460 45.192 104 57 0 13 116 6 109 1.38e-27 111
MS.gene89422.t1 AT2G32460 45.192 104 57 0 13 116 18 121 1.48e-27 112
MS.gene89422.t1 AT3G01530 42.982 114 65 0 4 117 16 129 2.93e-27 105
MS.gene89422.t1 AT1G25340 42.149 121 70 0 8 128 13 133 3.53e-27 107
MS.gene89422.t1 AT4G25560 46.602 103 55 0 14 116 11 113 4.61e-27 107
MS.gene89422.t1 AT1G48000 43.443 122 68 1 13 134 32 152 5.74e-27 106
MS.gene89422.t1 AT1G79180 40.667 150 55 2 3 119 5 153 1.16e-26 107
MS.gene89422.t1 AT1G68320 42.149 121 70 0 13 133 19 139 1.30e-26 106
MS.gene89422.t1 AT4G13480 48.571 105 54 0 12 116 5 109 1.36e-26 105
MS.gene89422.t1 AT5G06100 44.762 105 58 0 12 116 31 135 2.09e-26 108
MS.gene89422.t1 AT5G06100 44.762 105 58 0 12 116 31 135 4.87e-26 107
MS.gene89422.t1 AT5G06100 44.762 105 58 0 12 116 31 135 4.87e-26 107
MS.gene89422.t1 AT5G06100 44.762 105 58 0 12 116 31 135 4.87e-26 107
MS.gene89422.t1 AT5G06100 44.762 105 58 0 12 116 31 135 4.87e-26 107
MS.gene89422.t1 AT3G24310 47.573 103 54 0 14 116 19 121 5.24e-26 103
MS.gene89422.t1 AT3G08500 44.762 105 58 0 13 117 30 134 1.42e-25 104
MS.gene89422.t1 AT3G27810 42.991 107 61 0 13 119 20 126 1.50e-25 102
MS.gene89422.t1 AT2G26960 40.984 122 68 2 4 122 8 128 1.89e-25 105
MS.gene89422.t1 AT5G40350 43.119 109 62 0 13 121 17 125 1.93e-25 101
MS.gene89422.t1 AT1G66370 46.154 104 56 0 13 116 8 111 1.96e-25 102
MS.gene89422.t1 AT3G48920 41.905 105 61 0 14 118 19 123 2.98e-25 102
MS.gene89422.t1 AT5G52260 45.631 103 56 0 14 116 13 115 2.11e-24 99.8
MS.gene89422.t1 AT3G30210 43.689 103 58 0 13 115 27 129 3.44e-24 99.4
MS.gene89422.t1 AT5G59780 45.631 103 56 0 14 116 9 111 4.33e-24 98.2
MS.gene89422.t1 AT3G46130 44.660 103 57 0 14 116 10 112 1.54e-23 97.4
MS.gene89422.t1 AT5G14750 56.410 78 31 1 41 118 13 87 4.11e-23 94.0
MS.gene89422.t1 AT3G53200 37.681 138 78 1 9 146 5 134 4.19e-23 95.5
MS.gene89422.t1 AT1G71030 51.899 79 38 0 50 128 3 81 1.35e-22 92.8
MS.gene89422.t1 AT3G06490 40.984 122 72 0 2 123 8 129 1.47e-22 95.9
MS.gene89422.t1 AT1G25340 39.669 121 68 1 8 128 13 128 1.48e-22 95.1
MS.gene89422.t1 AT1G71030 51.899 79 38 0 50 128 17 95 1.67e-22 92.8
MS.gene89422.t1 AT1G66380 47.115 104 55 0 13 116 8 111 2.04e-22 91.3
MS.gene89422.t1 AT1G25340 39.669 121 68 1 8 128 13 128 2.65e-22 94.7
MS.gene89422.t1 AT5G35550 54.167 72 33 0 46 117 50 121 6.01e-22 93.2
MS.gene89422.t1 AT2G26950 36.496 137 82 3 18 150 21 156 1.58e-21 94.0
MS.gene89422.t1 AT5G49620 42.342 111 64 0 13 123 26 136 2.23e-21 92.4
MS.gene89422.t1 AT5G59780 47.826 92 43 1 28 119 7 93 2.93e-21 90.1
MS.gene89422.t1 AT3G60460 41.667 108 62 1 9 115 7 114 6.07e-21 90.9
MS.gene89422.t1 AT2G23290 43.269 104 58 1 15 118 13 115 1.16e-20 90.5
MS.gene89422.t1 AT3G47600 45.545 101 49 2 26 120 13 113 2.85e-20 89.7
MS.gene89422.t1 AT1G56650 41.322 121 61 1 13 133 8 118 2.86e-20 88.2
MS.gene89422.t1 AT3G46130 53.425 73 34 0 44 116 18 90 5.06e-20 87.4
MS.gene89422.t1 AT3G46130 51.220 82 39 1 45 126 9 89 5.67e-20 87.0
MS.gene89422.t1 AT1G66390 44.231 104 58 0 13 116 8 111 6.67e-20 87.0
MS.gene89422.t1 AT4G37260 34.545 165 94 4 4 167 2 153 8.11e-20 88.2
MS.gene89422.t1 AT3G12820 56.522 69 30 0 49 117 2 70 9.45e-20 85.5
MS.gene89422.t1 AT1G69560 33.758 157 97 4 1 156 93 243 1.05e-19 88.2
MS.gene89422.t1 AT1G69560 33.758 157 97 4 1 156 109 259 1.11e-19 88.2
MS.gene89422.t1 AT1G26780 40.367 109 62 3 12 119 95 201 1.38e-19 87.0
MS.gene89422.t1 AT3G27810 50.000 74 37 0 46 119 4 77 1.92e-19 84.3
MS.gene89422.t1 AT5G67300 40.385 104 61 1 15 118 6 108 2.56e-19 86.7
MS.gene89422.t1 AT1G26780 40.367 109 62 3 12 119 95 201 2.89e-19 87.0
MS.gene89422.t1 AT1G22640 56.897 58 25 0 71 128 13 70 3.68e-19 84.0
MS.gene89422.t1 AT5G40350 50.000 76 38 0 46 121 5 80 4.07e-19 83.2
MS.gene89422.t1 AT3G50060 40.385 104 61 1 15 118 6 108 1.69e-18 84.3
MS.gene89422.t1 AT3G55730 40.741 108 59 4 15 120 56 160 1.74e-18 85.5
MS.gene89422.t1 AT1G17950 40.566 106 60 3 12 116 2 105 2.08e-18 83.2
MS.gene89422.t1 AT3G53200 45.455 99 44 3 44 141 7 96 2.71e-18 81.6
MS.gene89422.t1 AT3G29020 37.615 109 65 3 12 119 62 168 2.89e-18 82.4
MS.gene89422.t1 AT2G39880 41.121 107 58 4 15 119 50 153 3.83e-18 84.0
MS.gene89422.t1 AT3G27785 35.294 119 76 1 1 119 175 292 3.84e-18 84.7
MS.gene89422.t1 AT5G17800 37.931 116 69 3 2 116 80 193 5.59e-18 83.2
MS.gene89422.t1 AT5G49620 37.600 125 64 1 13 123 26 150 6.53e-18 82.8
MS.gene89422.t1 AT5G02320 40.741 108 63 1 10 117 122 228 8.04e-18 84.0
MS.gene89422.t1 AT5G02320 40.741 108 63 1 10 117 122 228 8.04e-18 84.0
MS.gene89422.t1 AT5G02320 40.741 108 63 1 10 117 62 168 1.01e-17 83.6
MS.gene89422.t1 AT3G29020 37.615 109 65 3 12 119 64 170 1.08e-17 82.0
MS.gene89422.t1 AT1G73410 42.453 106 58 3 15 119 6 109 1.91e-17 79.3
MS.gene89422.t1 AT1G73410 42.453 106 58 3 15 119 6 109 2.68e-17 79.7
MS.gene89422.t1 AT3G09230 37.864 103 63 1 15 117 55 156 2.86e-17 81.6
MS.gene89422.t1 AT5G61420 64.000 50 18 0 82 131 2 51 4.75e-17 80.1
MS.gene89422.t1 AT5G58850 36.190 105 66 1 15 119 105 208 7.45e-17 80.9
MS.gene89422.t1 AT5G14750 66.667 48 16 0 71 118 13 60 8.89e-17 75.9
MS.gene89422.t1 AT5G14750 66.667 48 16 0 71 118 13 60 8.89e-17 75.9
MS.gene89422.t1 AT4G18770 30.233 129 87 2 9 137 211 336 9.33e-17 80.5
MS.gene89422.t1 AT3G09370 38.318 107 65 1 10 116 138 243 9.67e-17 80.9
MS.gene89422.t1 AT3G09370 38.318 107 65 1 10 116 130 235 1.13e-16 80.5
MS.gene89422.t1 AT3G09370 39.216 102 61 1 15 116 130 230 1.29e-16 80.5
MS.gene89422.t1 AT5G11050 35.514 107 68 1 13 119 103 208 2.41e-16 79.3
MS.gene89422.t1 AT1G66380 55.556 72 32 0 45 116 7 78 4.27e-16 73.2
MS.gene89422.t1 AT5G40360 32.407 108 72 1 8 115 151 257 8.03e-16 77.4
MS.gene89422.t1 AT2G25230 33.858 127 81 2 1 125 12 137 1.25e-15 75.1
MS.gene89422.t1 AT5G11510 33.333 108 71 1 10 117 76 182 1.69e-15 77.4
MS.gene89422.t1 AT5G11510 33.333 108 71 1 10 117 76 182 2.09e-15 77.0
MS.gene89422.t1 AT5G11510 33.333 108 71 1 10 117 76 182 2.50e-15 77.0
MS.gene89422.t1 AT5G11510 33.333 108 71 1 10 117 76 182 2.50e-15 77.0
MS.gene89422.t1 AT5G11510 33.333 108 71 1 10 117 76 182 2.50e-15 77.0
MS.gene89422.t1 AT4G33450 38.532 109 64 3 9 116 13 119 3.42e-15 74.3
MS.gene89422.t1 AT5G15310 73.171 41 11 0 89 129 9 49 2.18e-14 71.6
MS.gene89422.t1 AT4G32730 32.407 108 72 1 10 117 82 188 4.29e-14 73.2
MS.gene89422.t1 AT4G32730 32.407 108 72 1 10 117 82 188 4.45e-14 73.2
MS.gene89422.t1 AT4G32730 32.407 108 72 1 10 117 82 188 4.45e-14 73.2
MS.gene89422.t1 AT4G32730 32.407 108 72 1 10 117 82 188 4.45e-14 73.2
MS.gene89422.t1 AT4G32730 32.407 108 72 1 10 117 82 188 4.45e-14 73.2
MS.gene89422.t1 AT3G23250 61.702 47 18 0 71 117 13 59 4.90e-14 70.5
MS.gene89422.t1 AT4G28110 65.854 41 14 0 89 129 4 44 6.90e-14 69.3
MS.gene89422.t1 AT1G74430 61.905 42 16 0 88 129 18 59 7.39e-14 69.3
MS.gene89422.t1 AT5G14340 50.943 53 25 1 82 133 2 54 2.89e-13 67.4
MS.gene89422.t1 AT4G00540 33.636 110 71 1 13 120 101 210 7.93e-13 68.6
MS.gene89422.t1 AT4G00540 33.636 110 71 1 13 120 99 208 8.49e-13 68.6
MS.gene89422.t1 AT5G59780 55.102 49 22 0 71 119 1 49 1.40e-12 65.1
MS.gene89422.t1 AT3G46130 53.571 56 25 1 71 126 1 55 2.03e-12 65.1
MS.gene89422.t1 AT1G22640 62.500 40 15 0 89 128 16 55 8.18e-12 63.5
MS.gene89422.t1 AT5G39700 34.862 109 68 3 8 115 49 155 9.35e-12 63.2
MS.gene89422.t1 AT5G40430 31.858 113 75 2 9 121 48 158 6.78e-11 62.0

Find 45 sgRNAs with CRISPR-Local

Find 90 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCATAACTGTTTCCATTT+TGG 0.092201 3.3:+31918705 None:intergenic
TCTAAACTCATTGCTGATTA+TGG 0.130701 3.3:-31918820 MS.gene89422:CDS
TAATCCAACATCAATGTTTA+TGG 0.159625 3.3:-31918623 MS.gene89422:CDS
CTAAAATTTGTTGTTCTTGC+AGG 0.216669 3.3:+31918476 None:intergenic
TCTAAGCTTTCCTGAACTTT+TGG 0.228314 3.3:-31918353 MS.gene89422:CDS
TGTTGGATTATTATTATTAC+TGG 0.243760 3.3:+31918636 None:intergenic
GAGAAAGGCTTGTGAGTAAC+AGG 0.271065 3.3:+31918841 None:intergenic
TAACGATTAGATCTTCTTCT+TGG 0.278556 3.3:+31918992 None:intergenic
AAAGCAATTGCCACCCAAAA+TGG 0.287493 3.3:-31918719 MS.gene89422:CDS
AGAAAGTCATTCCAACTAAA+TGG 0.304797 3.3:+31918538 None:intergenic
GTCATATTAATCAAGACTTT+AGG 0.329393 3.3:-31918777 MS.gene89422:CDS
ATCATAGCTCAACAACTTCC+TGG 0.362064 3.3:-31918937 MS.gene89422:CDS
TGTTCTTGCAGGTTATTAGT+AGG 0.374223 3.3:+31918487 None:intergenic
ATTGCTGATTATGGAAATAT+AGG 0.383788 3.3:-31918811 MS.gene89422:CDS
ACAATGATGTTAAGAACAAT+TGG 0.395885 3.3:-31918906 MS.gene89422:CDS
TTAACAGGTGTTAAGAGGTA+TGG 0.406926 3.3:-31919081 MS.gene89422:intron
GTTTCTTGTGTTGAAGGTAA+TGG 0.419625 3.3:+31918574 None:intergenic
GTGTCATCAAAAGAGGTGTA+TGG 0.424156 3.3:-31919889 MS.gene89422:CDS
AACGATTAGATCTTCTTCTT+GGG 0.424842 3.3:+31918993 None:intergenic
GATGGTTCCTCCAAAAGTTC+AGG 0.442409 3.3:+31918343 None:intergenic
AAGTTTGTTTCTTGTGTTGA+AGG 0.448562 3.3:+31918568 None:intergenic
CCTTCATTTGCCTCAGAACA+TGG 0.456576 3.3:-31919842 MS.gene89422:CDS
GCTTCCATAAACATTGATGT+TGG 0.479934 3.3:+31918619 None:intergenic
TGGGTGGCAATTGCTTTGAT+AGG 0.480894 3.3:+31918725 None:intergenic
GTGAACTTATCATCATGCTT+AGG 0.502782 3.3:+31919018 None:intergenic
GATAGACCACCTACTACCTA+TGG 0.517239 3.3:+31918957 None:intergenic
CCATGTTCTGAGGCAAATGA+AGG 0.535126 3.3:+31919842 None:intergenic
ACATCATTGTCTGTTCTCCC+AGG 0.541477 3.3:+31918919 None:intergenic
TCAGCAATGAGTTTAGAGAA+AGG 0.549669 3.3:+31918826 None:intergenic
TGGATTGTTATCAAAGAAAG+AGG 0.553257 3.3:-31918452 MS.gene89422:CDS
TGAACTGATTAGTAATGGGA+TGG 0.554302 3.3:+31918325 None:intergenic
TGTCATCAAAAGAGGTGTAT+GGG 0.555994 3.3:-31919888 MS.gene89422:CDS
TCATAGCTCAACAACTTCCT+GGG 0.565623 3.3:-31918936 MS.gene89422:CDS
TTCATGCAGCCATAGGTAGT+AGG 0.572814 3.3:-31918966 MS.gene89422:CDS
GTTAAGCTTCATGCAGCCAT+AGG 0.575069 3.3:-31918973 MS.gene89422:CDS
ATCATGCTTAGGATCAAGCA+TGG 0.606048 3.3:+31919029 None:intergenic
AAAAGAAGCTTTCTCAAATG+GGG 0.633115 3.3:-31918870 MS.gene89422:CDS
ATTAACAGATCCATGTTCTG+AGG 0.633527 3.3:+31919832 None:intergenic
GGTTGCAGAAGAAGATGCAA+AGG 0.633633 3.3:-31919867 MS.gene89422:CDS
TATTAGCAGAAAACATGGTG+AGG 0.644952 3.3:-31919934 None:intergenic
ATGCAGCCATAGGTAGTAGG+TGG 0.657431 3.3:-31918963 MS.gene89422:CDS
TGTCTGAGGATGATGAGACT+TGG 0.667702 3.3:+31918419 None:intergenic
CTCTACGAATGAAATGTCTG+AGG 0.670182 3.3:+31918405 None:intergenic
GCTGATTATGGAAATATAGG+TGG 0.681369 3.3:-31918808 MS.gene89422:CDS
AGAAAGGCTTGTGAGTAACA+GGG 0.701057 3.3:+31918842 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAATTACACATGAATATA+AGG - chr3.3:31918762-31918781 MS.gene89422:CDS 15.0%
!!! AAGAATATGTTTTTATTAAC+AGG - chr3.3:31919157-31919176 MS.gene89422:intron 15.0%
!!! ATCTATATTTTTAGCAAATT+TGG + chr3.3:31918688-31918707 None:intergenic 15.0%
!! TGTTGGATTATTATTATTAC+TGG + chr3.3:31919620-31919639 None:intergenic 20.0%
!!! AAATTGATTTTGATTGCATT+AGG - chr3.3:31918886-31918905 MS.gene89422:CDS 20.0%
!!! ATATTTTTAGCAAATTTGGT+TGG + chr3.3:31918684-31918703 None:intergenic 20.0%
! AAAAAGAAGCTTTCTCAAAT+GGG - chr3.3:31919382-31919401 MS.gene89422:intron 25.0%
! AAAAATAGTGTCATCAAAAG+AGG - chr3.3:31918357-31918376 MS.gene89422:CDS 25.0%
! AAAACAGAGAAATCATAAGA+TGG + chr3.3:31918539-31918558 None:intergenic 25.0%
! ACAATGATGTTAAGAACAAT+TGG - chr3.3:31919347-31919366 MS.gene89422:intron 25.0%
! GTCATATTAATCAAGACTTT+AGG - chr3.3:31919476-31919495 MS.gene89422:intron 25.0%
! TAATCCAACATCAATGTTTA+TGG - chr3.3:31919630-31919649 MS.gene89422:intron 25.0%
! TCAAAGTAACTAATGTTTCT+AGG + chr3.3:31918862-31918881 None:intergenic 25.0%
!! AGAAACATTAGTTACTTTGA+AGG - chr3.3:31918862-31918881 MS.gene89422:CDS 25.0%
!! ATTCATAACTGTTTCCATTT+TGG + chr3.3:31919551-31919570 None:intergenic 25.0%
!! ATTGCTGATTATGGAAATAT+AGG - chr3.3:31919442-31919461 MS.gene89422:intron 25.0%
!! TTCATAACTGTTTCCATTTT+GGG + chr3.3:31919550-31919569 None:intergenic 25.0%
!! TTTTATTAACAGGTGTTAAG+AGG - chr3.3:31919167-31919186 MS.gene89422:intron 25.0%
!!! CATTTTCTACTTTTGTCATT+GGG + chr3.3:31919594-31919613 None:intergenic 25.0%
!!! TCATTTTCTACTTTTGTCAT+TGG + chr3.3:31919595-31919614 None:intergenic 25.0%
AAAAGAAGCTTTCTCAAATG+GGG - chr3.3:31919383-31919402 MS.gene89422:intron 30.0%
AACGATTAGATCTTCTTCTT+GGG + chr3.3:31919263-31919282 None:intergenic 30.0%
AGAAAGTCATTCCAACTAAA+TGG + chr3.3:31919718-31919737 None:intergenic 30.0%
GAAAAAGAAGCTTTCTCAAA+TGG - chr3.3:31919381-31919400 MS.gene89422:intron 30.0%
GAATGTATGTTTGATGCTAA+AGG - chr3.3:31918626-31918645 MS.gene89422:CDS 30.0%
TAACGATTAGATCTTCTTCT+TGG + chr3.3:31919264-31919283 None:intergenic 30.0%
TGGATTGTTATCAAAGAAAG+AGG - chr3.3:31919801-31919820 MS.gene89422:intron 30.0%
! AAGTTTGTTTCTTGTGTTGA+AGG + chr3.3:31919688-31919707 None:intergenic 30.0%
! CAAGAACAACAAATTTTAGG+TGG - chr3.3:31919781-31919800 MS.gene89422:intron 30.0%
! CTGCAAGAACAACAAATTTT+AGG - chr3.3:31919778-31919797 MS.gene89422:intron 30.0%
! TCTAAACTCATTGCTGATTA+TGG - chr3.3:31919433-31919452 MS.gene89422:intron 30.0%
!! CAGTAAAGTTGATGAATACA+TGG - chr3.3:31919122-31919141 MS.gene89422:intron 30.0%
!! CTAAAATTTGTTGTTCTTGC+AGG + chr3.3:31919780-31919799 None:intergenic 30.0%
!!! AGTCTCTAACCTGTTTTTTT+AGG + chr3.3:31918459-31918478 None:intergenic 30.0%
!!! GTCTCTAACCTGTTTTTTTA+GGG + chr3.3:31918458-31918477 None:intergenic 30.0%
AATGAAGCAGAGATACTTCT+CGG + chr3.3:31919061-31919080 None:intergenic 35.0%
AATGTTAGGTTTACGAGGAT+TGG + chr3.3:31918833-31918852 None:intergenic 35.0%
ACACATGAATATAAGGCAAG+CGG - chr3.3:31918769-31918788 MS.gene89422:CDS 35.0%
ACTTCTGTCCCTAAAAAAAC+AGG - chr3.3:31918447-31918466 MS.gene89422:CDS 35.0%
ATTAACAGATCCATGTTCTG+AGG + chr3.3:31918424-31918443 None:intergenic 35.0%
GCTGATTATGGAAATATAGG+TGG - chr3.3:31919445-31919464 MS.gene89422:intron 35.0%
GCTTCCATAAACATTGATGT+TGG + chr3.3:31919637-31919656 None:intergenic 35.0%
GTGAACTTATCATCATGCTT+AGG + chr3.3:31919238-31919257 None:intergenic 35.0%
GTTTCTTGTGTTGAAGGTAA+TGG + chr3.3:31919682-31919701 None:intergenic 35.0%
TCAGCAATGAGTTTAGAGAA+AGG + chr3.3:31919430-31919449 None:intergenic 35.0%
TGTTCTTGCAGGTTATTAGT+AGG + chr3.3:31919769-31919788 None:intergenic 35.0%
TTAACAGGTGTTAAGAGGTA+TGG - chr3.3:31919172-31919191 MS.gene89422:intron 35.0%
TTTCTAGGTCCATGAATGTT+AGG + chr3.3:31918847-31918866 None:intergenic 35.0%
! ACTTTTCTGCACCATTTAGT+TGG - chr3.3:31919704-31919723 MS.gene89422:intron 35.0%
! ATAACTGTTTCCATTTTGGG+TGG + chr3.3:31919547-31919566 None:intergenic 35.0%
! CTCATTTTCTTGATCGAGTA+TGG + chr3.3:31919875-31919894 None:intergenic 35.0%
! TAGGTTGAAAAGTTTGCATC+AGG - chr3.3:31918905-31918924 MS.gene89422:CDS 35.0%
! TCTAAGCTTTCCTGAACTTT+TGG - chr3.3:31919900-31919919 MS.gene89422:CDS 35.0%
! TGTCATCAAAAGAGGTGTAT+GGG - chr3.3:31918365-31918384 MS.gene89422:CDS 35.0%
!! TTCTACTTTTGTCATTGGGA+TGG + chr3.3:31919590-31919609 None:intergenic 35.0%
!!! ATTGGTTTTGCCGTTCAAAA+AGG + chr3.3:31918815-31918834 None:intergenic 35.0%
AAAGCAATTGCCACCCAAAA+TGG - chr3.3:31919534-31919553 MS.gene89422:intron 40.0%
AGAAAGGCTTGTGAGTAACA+GGG + chr3.3:31919414-31919433 None:intergenic 40.0%
ATCATAGCTCAACAACTTCC+TGG - chr3.3:31919316-31919335 MS.gene89422:intron 40.0%
ATCATGCTTAGGATCAAGCA+TGG + chr3.3:31919227-31919246 None:intergenic 40.0%
ATGGAAAAAGTTGCAGGCTT+AGG - chr3.3:31919191-31919210 MS.gene89422:intron 40.0%
CCATGAATGTTAGGTTTACG+AGG + chr3.3:31918838-31918857 None:intergenic 40.0%
CCTCGTAAACCTAACATTCA+TGG - chr3.3:31918835-31918854 MS.gene89422:CDS 40.0%
CTCTACGAATGAAATGTCTG+AGG + chr3.3:31919851-31919870 None:intergenic 40.0%
GCAAATTTGGTTGGACAGAA+AGG + chr3.3:31918675-31918694 None:intergenic 40.0%
TCATAGCTCAACAACTTCCT+GGG - chr3.3:31919317-31919336 MS.gene89422:intron 40.0%
! AAGCTTTCCTGAACTTTTGG+AGG - chr3.3:31919903-31919922 MS.gene89422:CDS 40.0%
! AGAGGTATGGAAAAAGTTGC+AGG - chr3.3:31919185-31919204 MS.gene89422:intron 40.0%
! CTTTTGTCATTGGGATGGTT+TGG + chr3.3:31919585-31919604 None:intergenic 40.0%
! GTGTCATCAAAAGAGGTGTA+TGG - chr3.3:31918364-31918383 MS.gene89422:CDS 40.0%
ACATCATTGTCTGTTCTCCC+AGG + chr3.3:31919337-31919356 None:intergenic 45.0%
CCTTCATTTGCCTCAGAACA+TGG - chr3.3:31918411-31918430 MS.gene89422:CDS 45.0%
GAAAAAGTTGCAGGCTTAGG+TGG - chr3.3:31919194-31919213 MS.gene89422:intron 45.0%
GAGAAAGGCTTGTGAGTAAC+AGG + chr3.3:31919415-31919434 None:intergenic 45.0%
GATAGACCACCTACTACCTA+TGG + chr3.3:31919299-31919318 None:intergenic 45.0%
GATGGTTCCTCCAAAAGTTC+AGG + chr3.3:31919913-31919932 None:intergenic 45.0%
GCAGAGATACTTCTCGGATT+AGG + chr3.3:31919055-31919074 None:intergenic 45.0%
GGTTGCAGAAGAAGATGCAA+AGG - chr3.3:31918386-31918405 MS.gene89422:CDS 45.0%
GTTAAGCTTCATGCAGCCAT+AGG - chr3.3:31919280-31919299 MS.gene89422:intron 45.0%
TGGGTGGCAATTGCTTTGAT+AGG + chr3.3:31919531-31919550 None:intergenic 45.0%
TGTCTGAGGATGATGAGACT+TGG + chr3.3:31919837-31919856 None:intergenic 45.0%
TTCATGCAGCCATAGGTAGT+AGG - chr3.3:31919287-31919306 MS.gene89422:intron 45.0%
!! CCATGTTCTGAGGCAAATGA+AGG + chr3.3:31918414-31918433 None:intergenic 45.0%
ATGCAGCCATAGGTAGTAGG+TGG - chr3.3:31919290-31919309 MS.gene89422:intron 50.0%
GATTAGGCGTCTCTCAGTGT+CGG + chr3.3:31919039-31919058 None:intergenic 50.0%
TGCCGTTCAAAAAGGCCTAG+CGG + chr3.3:31918807-31918826 None:intergenic 50.0%
CACCAGACACGACACAGATG+TGG - chr3.3:31918967-31918986 MS.gene89422:CDS 55.0%
GTCCACATCTGTGTCGTGTC+TGG + chr3.3:31918972-31918991 None:intergenic 55.0%
! CGCCGCTAGGCCTTTTTGAA+CGG - chr3.3:31918802-31918821 MS.gene89422:CDS 55.0%
CGGACAACAAGCTCGCCGCT+AGG - chr3.3:31918789-31918808 MS.gene89422:CDS 65.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 31918333 31919942 31918333 ID=MS.gene89422
chr3.3 mRNA 31918333 31919942 31918333 ID=MS.gene89422.t1;Parent=MS.gene89422
chr3.3 exon 31919807 31919942 31919807 ID=MS.gene89422.t1.exon1;Parent=MS.gene89422.t1
chr3.3 CDS 31919807 31919942 31919807 ID=cds.MS.gene89422.t1;Parent=MS.gene89422.t1
chr3.3 exon 31918333 31919096 31918333 ID=MS.gene89422.t1.exon2;Parent=MS.gene89422.t1
chr3.3 CDS 31918333 31919096 31918333 ID=cds.MS.gene89422.t1;Parent=MS.gene89422.t1
Gene Sequence

>MS.gene89422

ATGGTGAGGTCTTCAAGTTGTGAAAAAAATAGTGTCATCAAAAGAGGTGTATGGGTTGCAGAAGAAGATGCAAAGGCACCTTCATTTGCCTCAGAACATGGATCTGTTAATTTGACTTCTGTCCCTAAAAAAACAGGTTAGAGACTTGTTTCTTTTTCAATAAAATATTTACTATATGTTAAAATGAGAAATTGTTATGTTTTCCATCTTATGATTTCTCTGTTTTTCTCATTTCTCATATTCTTTTTTCTTAGTAATTTTTATCTCACACAGATAAGTTTCATCTCATTCTTGAATGTATGTTTGATGCTAAAGGAGAGAATGTAACAGCTGATTTTACCTTTCTGTCCAACCAAATTTGCTAAAAATATAGATGTTTAGTTTTTTTTTTTATAACAATAATATTAATTAAAAATATATATAAGATGATTAAATTACACATGAATATAAGGCAAGCGGACAACAAGCTCGCCGCTAGGCCTTTTTGAACGGCAAAACCAATCCTCGTAAACCTAACATTCATGGACCTAGAAACATTAGTTACTTTGAAGGCAAATTGATTTTGATTGCATTAGGTTGAAAAGTTTGCATCAGGTTTTACTTCAATTTTAACATAATCACTATGAATCACGAACACCAGACACGACACAGATGTGGACACGTTGACACTGCTAATGTCATAAACATAAACATCGATGTGTGTCCGACACTGAGAGACGCCTAATCCGAGAAGTATCTCTGCTTCATTGATAATCAATTTTACAAAATTTAAGTTTATTCAAAATGACACAGTAAAGTTGATGAATACATGGATTGAATTTGATAAGAATATGTTTTTATTAACAGGTGTTAAGAGGTATGGAAAAAGTTGCAGGCTTAGGTGGAGTAACTCCATGCTTGATCCTAAGCATGATGATAAGTTCACATCCCAAGAAGAAGATCTAATCGTTAAGCTTCATGCAGCCATAGGTAGTAGGTGGTCTATCATAGCTCAACAACTTCCTGGGAGAACAGACAATGATGTTAAGAACAATTGGAACACAAAGCTGAAAAAGAAGCTTTCTCAAATGGGGATAGACCCTGTTACTCACAAGCCTTTCTCTAAACTCATTGCTGATTATGGAAATATAGGTGGTGCTAATTGTCATATTAATCAAGACTTTAGGAATCAAAGATTGATCAGAAACACAAATGACCTATCAAAGCAATTGCCACCCAAAATGGAAACAGTTATGAATCTTTCACAGTTCCAAACCATCCCAATGACAAAAGTAGAAAATGAAACCAGTAATAATAATAATCCAACATCAATGTTTATGGAAGCATTCTTGTCATCATCATCATCACCATTACCTTCAACACAAGAAACAAACTTTTCTGCACCATTTAGTTGGAATGACTTTCTTCTACAAGATGCTTTTTCACAAGATGCACCTACTAATAACCTGCAAGAACAACAAATTTTAGGTGGATTGTTATCAAAGAAAGAGGTCATGTCACACCAAGTCTCATCATCCTCAGACATTTCATTCGTAGAGACCATACTCGATCAAGAAAATGAGATGTTTCTAAGCTTTCCTGAACTTTTGGAGGAACCATCCCATTACTAA
Protein sequence

>MS.gene89422.t1

MVRSSSCEKNSVIKRGVWVAEEDAKAPSFASEHGSVNLTSVPKKTGVKRYGKSCRLRWSNSMLDPKHDDKFTSQEEDLIVKLHAAIGSRWSIIAQQLPGRTDNDVKNNWNTKLKKKLSQMGIDPVTHKPFSKLIADYGNIGGANCHINQDFRNQRLIRNTNDLSKQLPPKMETVMNLSQFQTIPMTKVENETSNNNNPTSMFMEAFLSSSSSPLPSTQETNFSAPFSWNDFLLQDAFSQDAPTNNLQEQQILGGLLSKKEVMSHQVSSSSDISFVETILDQENEMFLSFPELLEEPSHY