AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene89479

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89479.t1 MTR_2g064090 95.389 347 15 1 1 347 1 346 0.0 695
MS.gene89479.t1 MTR_3g064580 73.810 168 44 0 1 168 1 168 2.46e-87 276
MS.gene89479.t1 MTR_5g076850 50.331 302 128 9 1 300 1 282 3.17e-86 273
MS.gene89479.t1 MTR_6g477900 71.519 158 44 1 1 158 1 157 9.40e-83 251
MS.gene89479.t1 MTR_5g014300 50.711 211 85 3 1 204 1 199 1.45e-67 216
MS.gene89479.t1 MTR_4g098630 60.000 160 60 2 1 157 1 159 1.86e-63 204
MS.gene89479.t1 MTR_4g101680 54.217 166 72 2 6 170 7 169 1.45e-61 201
MS.gene89479.t1 MTR_8g076110 51.765 170 74 3 1 167 1 165 1.93e-60 196
MS.gene89479.t1 MTR_2g079990 55.063 158 68 2 1 158 11 165 4.99e-60 197
MS.gene89479.t1 MTR_1g090723 54.190 179 78 3 8 185 10 185 5.49e-60 202
MS.gene89479.t1 MTR_1g090723 54.190 179 78 3 8 185 10 185 8.48e-60 203
MS.gene89479.t1 MTR_1g090723 55.307 179 77 3 8 185 10 186 8.90e-60 203
MS.gene89479.t1 MTR_4g036030 54.839 155 66 2 6 159 7 158 1.10e-59 196
MS.gene89479.t1 MTR_4g081870 56.604 159 64 3 2 157 5 161 1.36e-59 193
MS.gene89479.t1 MTR_8g059170 53.179 173 74 3 1 168 9 179 1.84e-59 194
MS.gene89479.t1 MTR_0036s0150 53.889 180 79 3 8 186 7 183 2.44e-59 200
MS.gene89479.t1 MTR_1g096430 57.516 153 61 2 6 157 7 156 7.26e-59 193
MS.gene89479.t1 MTR_5g021710 56.209 153 63 2 6 157 8 157 7.79e-59 194
MS.gene89479.t1 MTR_4g035590 55.556 153 63 2 6 157 8 156 1.58e-58 193
MS.gene89479.t1 MTR_5g041940 56.688 157 63 3 4 157 1 155 1.86e-58 190
MS.gene89479.t1 MTR_7g085220 53.939 165 62 4 6 158 8 170 1.91e-58 192
MS.gene89479.t1 MTR_1g097300 46.696 227 111 5 4 229 17 234 2.03e-58 198
MS.gene89479.t1 MTR_2g080010 51.099 182 73 5 6 173 15 194 5.75e-58 191
MS.gene89479.t1 MTR_1g090720 57.233 159 63 1 5 158 41 199 6.37e-58 195
MS.gene89479.t1 MTR_8g094580 40.580 276 123 8 4 265 5 253 1.15e-57 188
MS.gene89479.t1 MTR_6g012670 56.774 155 62 3 6 158 20 171 1.77e-57 189
MS.gene89479.t1 MTR_3g096920 55.000 160 67 3 4 161 5 161 2.06e-57 188
MS.gene89479.t1 MTR_2g062730 53.846 156 67 3 4 157 8 160 2.44e-57 189
MS.gene89479.t1 MTR_5g012080 55.128 156 66 3 6 159 7 160 3.23e-57 189
MS.gene89479.t1 MTR_5g069030 45.528 246 103 6 6 238 25 252 3.44e-57 196
MS.gene89479.t1 MTR_3g088110 46.121 232 107 7 4 225 5 228 4.88e-57 187
MS.gene89479.t1 MTR_6g084430 57.143 154 61 2 6 159 5 153 5.62e-57 188
MS.gene89479.t1 MTR_2g078700 59.615 156 58 3 6 158 23 176 6.13e-57 189
MS.gene89479.t1 MTR_2g064470 56.098 164 68 2 1 164 6 165 1.15e-56 186
MS.gene89479.t1 MTR_3g096140 55.333 150 66 1 8 157 9 157 1.22e-56 186
MS.gene89479.t1 MTR_8g063550 54.777 157 70 1 1 157 1 156 1.56e-56 187
MS.gene89479.t1 MTR_4g108760 55.000 160 61 3 4 158 15 168 2.65e-56 187
MS.gene89479.t1 MTR_8g063550 54.777 157 70 1 1 157 1 156 3.19e-56 189
MS.gene89479.t1 MTR_8g063550 54.777 157 70 1 1 157 1 156 4.64e-56 189
MS.gene89479.t1 MTR_3g093040 52.761 163 66 2 1 158 103 259 4.87e-56 185
MS.gene89479.t1 MTR_3g093050 57.233 159 57 2 5 158 21 173 5.25e-56 192
MS.gene89479.t1 MTR_2157s0010 52.000 175 71 4 6 169 8 180 5.39e-56 184
MS.gene89479.t1 MTR_3g435150 39.655 290 143 8 4 286 14 278 6.62e-56 184
MS.gene89479.t1 MTR_3g093050 57.233 159 57 2 5 158 21 173 7.34e-56 192
MS.gene89479.t1 MTR_3g096140 55.333 150 66 1 8 157 9 157 8.77e-56 186
MS.gene89479.t1 MTR_2g079990 58.088 136 55 1 1 136 11 144 1.29e-55 186
MS.gene89479.t1 MTR_6g011860 54.321 162 63 4 6 158 15 174 6.26e-55 184
MS.gene89479.t1 MTR_8g024480 49.102 167 76 3 6 163 15 181 2.02e-54 184
MS.gene89479.t1 MTR_7g005280 54.023 174 69 5 4 175 13 177 3.28e-54 179
MS.gene89479.t1 MTR_4g089135 49.153 177 64 4 6 158 15 189 3.60e-54 181
MS.gene89479.t1 MTR_3g109340 55.769 156 62 3 5 158 21 171 5.64e-54 181
MS.gene89479.t1 MTR_6g032770 42.400 250 125 8 3 247 15 250 9.54e-54 181
MS.gene89479.t1 MTR_1g008740 57.595 158 58 6 5 158 26 178 1.11e-53 181
MS.gene89479.t1 MTR_1g008740 57.595 158 58 6 5 158 12 164 1.21e-53 180
MS.gene89479.t1 MTR_8g093580 52.229 157 74 1 1 157 1 156 2.19e-53 183
MS.gene89479.t1 MTR_2g093810 50.289 173 73 5 5 170 13 179 3.86e-53 178
MS.gene89479.t1 MTR_3g096920 61.538 130 47 2 4 133 5 131 3.97e-53 178
MS.gene89479.t1 MTR_3g109340 55.414 157 62 4 5 158 21 172 3.43e-52 176
MS.gene89479.t1 MTR_1g069805 54.194 155 62 3 5 157 9 156 9.35e-52 173
MS.gene89479.t1 MTR_8g467490 50.932 161 67 4 8 158 16 174 1.30e-51 176
MS.gene89479.t1 MTR_7g085260 51.534 163 72 3 4 161 15 175 1.45e-51 176
MS.gene89479.t1 MTR_7g097090 54.902 153 60 3 5 155 9 154 4.14e-51 172
MS.gene89479.t1 MTR_5g040420 51.250 160 67 4 8 158 16 173 4.83e-51 174
MS.gene89479.t1 MTR_3g116070 56.494 154 60 4 6 154 23 174 1.40e-50 172
MS.gene89479.t1 MTR_2g086880 51.899 158 67 2 1 158 13 161 2.28e-50 176
MS.gene89479.t1 MTR_2g086880 51.899 158 67 2 1 158 13 161 3.40e-50 176
MS.gene89479.t1 MTR_3g070030 51.875 160 65 3 4 157 17 170 5.36e-50 171
MS.gene89479.t1 MTR_4g134460 51.316 152 68 3 8 158 56 202 1.84e-49 171
MS.gene89479.t1 MTR_7g100990 49.686 159 73 3 4 157 9 165 3.49e-49 168
MS.gene89479.t1 MTR_7g011130 57.778 135 51 2 9 143 22 150 1.46e-47 164
MS.gene89479.t1 MTR_2g068880 46.988 166 73 4 8 159 24 188 5.20e-46 159
MS.gene89479.t1 MTR_3g096140 52.206 136 64 1 22 157 2 136 5.54e-46 160
MS.gene89479.t1 MTR_2g068920 46.243 173 74 5 8 162 23 194 2.31e-45 157
MS.gene89479.t1 MTR_7g011120 53.571 140 59 2 4 143 6 139 5.73e-44 154
MS.gene89479.t1 MTR_4g075980 42.690 171 84 4 8 172 17 179 4.06e-43 151
MS.gene89479.t1 MTR_8g023840 49.342 152 67 4 6 154 11 155 8.25e-43 153
MS.gene89479.t1 MTR_3g070040 49.669 151 68 3 10 157 12 157 7.81e-42 149
MS.gene89479.t1 MTR_5g090970 44.720 161 76 3 8 157 20 178 1.16e-41 147
MS.gene89479.t1 MTR_5g090970 43.478 161 77 3 8 157 20 177 2.16e-40 144
MS.gene89479.t1 MTR_8g023860 47.368 152 70 4 6 154 12 156 1.93e-39 144
MS.gene89479.t1 MTR_8g023930 44.311 167 79 5 6 169 24 179 8.96e-39 144
MS.gene89479.t1 MTR_8g023900 46.497 157 74 5 6 158 12 162 4.34e-38 142
MS.gene89479.t1 MTR_8g023900 43.503 177 80 7 1 169 184 348 4.70e-37 139
MS.gene89479.t1 MTR_4g052620 45.513 156 79 5 6 155 5 160 1.03e-37 136
MS.gene89479.t1 MTR_8g099750 43.226 155 78 3 6 154 14 164 9.36e-37 132
MS.gene89479.t1 MTR_3g098810 43.210 162 77 4 6 157 14 170 1.55e-35 129
MS.gene89479.t1 MTR_8g094580 36.842 228 99 8 63 276 8 204 9.22e-35 127
MS.gene89479.t1 MTR_3g098810 46.617 133 63 2 6 134 14 142 2.44e-34 124
MS.gene89479.t1 MTR_2g086690 43.038 158 79 6 7 155 5 160 3.69e-34 126
MS.gene89479.t1 MTR_7g105170 40.244 164 87 6 5 158 3 165 8.72e-33 123
MS.gene89479.t1 MTR_8g023880 39.412 170 75 6 5 157 6 164 4.96e-31 118
MS.gene89479.t1 MTR_4g094302 41.509 159 76 4 6 157 11 159 1.44e-30 115
MS.gene89479.t1 MTR_4g094302 45.385 130 59 3 6 133 11 130 2.32e-30 113
MS.gene89479.t1 MTR_7g070140 47.059 102 44 2 56 147 12 113 7.60e-24 95.5
MS.gene89479.t1 MTR_7g083330 33.758 157 97 4 4 159 16 166 6.17e-22 92.0
MS.gene89479.t1 MTR_8g093790 31.019 216 110 10 2 215 6 184 1.53e-19 85.5
MS.gene89479.t1 MTR_7g083360 31.013 158 97 4 2 156 6 154 1.82e-18 81.6
MS.gene89479.t1 MTR_7g083370 31.579 133 87 3 6 137 10 139 1.42e-17 79.0
MS.gene89479.t1 MTR_3g096400 27.439 164 100 4 4 156 5 160 7.84e-16 75.9
MS.gene89479.t1 MTR_7g070150 52.459 61 24 2 98 157 1 57 4.51e-15 70.5
MS.gene89479.t1 MTR_1g087190 63.043 46 16 1 8 52 7 52 8.01e-14 65.9
MS.gene89479.t1 MTR_8g102240 32.051 156 74 7 4 133 45 194 3.88e-11 64.3
MS.gene89479.t1 MTR_8g102240 32.051 156 74 7 4 133 45 194 3.89e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89479.t1 AT1G54330 50.000 334 124 7 1 333 1 292 4.76e-97 290
MS.gene89479.t1 AT3G17730 77.070 157 35 1 1 157 1 156 8.14e-87 262
MS.gene89479.t1 AT3G03200 72.956 159 43 0 1 159 1 159 4.71e-86 268
MS.gene89479.t1 AT1G65910 70.455 176 48 2 1 176 1 172 2.98e-85 270
MS.gene89479.t1 AT5G17260 72.327 159 44 0 1 159 1 159 3.21e-85 266
MS.gene89479.t1 AT5G46590 57.229 166 69 2 1 164 1 166 5.18e-67 213
MS.gene89479.t1 AT4G17980 60.248 161 59 3 1 157 1 160 8.11e-67 211
MS.gene89479.t1 AT4G17980 60.248 161 59 3 1 157 1 160 1.04e-66 212
MS.gene89479.t1 AT3G10480 57.831 166 69 1 1 165 22 187 7.37e-65 212
MS.gene89479.t1 AT3G10490 56.571 175 70 2 5 173 26 200 7.50e-65 206
MS.gene89479.t1 AT3G10490 46.552 232 112 5 5 225 26 256 1.31e-63 209
MS.gene89479.t1 AT3G10480 57.831 166 68 2 1 165 22 186 1.42e-63 209
MS.gene89479.t1 AT5G46590 59.459 148 59 1 1 147 1 148 3.16e-63 202
MS.gene89479.t1 AT3G10500 59.756 164 64 2 5 168 8 169 1.14e-62 209
MS.gene89479.t1 AT4G27410 56.962 158 65 2 1 158 9 163 2.65e-62 201
MS.gene89479.t1 AT1G32510 55.758 165 66 1 1 158 1 165 5.22e-62 200
MS.gene89479.t1 AT5G66300 54.878 164 71 2 5 167 11 172 5.25e-62 200
MS.gene89479.t1 AT5G04410 58.537 164 66 2 5 168 8 169 4.21e-61 205
MS.gene89479.t1 AT3G15500 56.962 158 63 3 1 157 9 162 1.73e-59 194
MS.gene89479.t1 AT3G10480 48.744 199 68 2 1 165 22 220 2.26e-59 199
MS.gene89479.t1 AT2G18060 53.801 171 72 4 1 167 1 168 2.90e-59 195
MS.gene89479.t1 AT2G18060 53.801 171 72 4 1 167 1 168 2.90e-59 195
MS.gene89479.t1 AT4G10350 57.792 154 61 3 6 157 9 160 8.20e-59 193
MS.gene89479.t1 AT1G52890 56.329 158 64 3 1 157 9 162 1.07e-58 192
MS.gene89479.t1 AT1G71930 56.051 157 63 3 5 159 8 160 1.19e-58 192
MS.gene89479.t1 AT1G71930 56.051 157 63 3 5 159 8 160 1.19e-58 192
MS.gene89479.t1 AT4G27410 52.023 173 67 3 1 158 9 180 1.43e-58 192
MS.gene89479.t1 AT1G33280 50.289 173 81 2 6 177 8 176 3.39e-58 191
MS.gene89479.t1 AT3G04070 48.108 185 75 5 5 170 9 191 7.19e-58 191
MS.gene89479.t1 AT4G35580 57.595 158 56 2 5 157 8 159 1.73e-57 195
MS.gene89479.t1 AT4G35580 57.595 158 56 2 5 157 8 159 1.80e-57 195
MS.gene89479.t1 AT4G35580 57.595 158 56 2 5 157 8 159 1.85e-57 194
MS.gene89479.t1 AT1G62700 54.194 155 67 2 6 159 7 158 1.92e-57 191
MS.gene89479.t1 AT1G62700 54.194 155 67 2 6 159 7 158 1.92e-57 191
MS.gene89479.t1 AT4G36160 55.844 154 64 3 5 157 13 163 1.99e-57 191
MS.gene89479.t1 AT1G69490 55.769 156 64 2 5 157 8 161 2.12e-57 187
MS.gene89479.t1 AT4G36160 55.844 154 64 3 5 157 9 159 2.27e-57 191
MS.gene89479.t1 AT4G36160 55.844 154 64 3 5 157 9 159 2.27e-57 191
MS.gene89479.t1 AT1G12260 52.258 155 70 2 6 159 7 158 2.90e-57 189
MS.gene89479.t1 AT1G12260 52.258 155 70 2 6 159 7 158 5.69e-57 190
MS.gene89479.t1 AT1G33060 56.329 158 58 2 5 157 23 174 6.78e-57 196
MS.gene89479.t1 AT1G33060 56.329 158 58 2 5 157 23 174 7.48e-57 196
MS.gene89479.t1 AT5G39610 56.604 159 58 3 4 157 18 170 9.73e-57 186
MS.gene89479.t1 AT3G18400 56.209 153 63 2 6 158 5 153 1.14e-56 187
MS.gene89479.t1 AT5G08790 56.329 158 62 3 4 157 5 159 1.81e-56 185
MS.gene89479.t1 AT5G07680 56.410 156 65 2 4 158 1 154 2.03e-56 186
MS.gene89479.t1 AT5G07680 56.410 156 65 2 4 158 15 168 2.13e-56 187
MS.gene89479.t1 AT5G61430 41.339 254 116 8 4 246 14 245 2.51e-56 187
MS.gene89479.t1 AT1G76420 58.710 155 58 3 6 158 22 172 3.89e-56 186
MS.gene89479.t1 AT2G24430 57.962 157 58 4 5 158 15 166 3.91e-56 186
MS.gene89479.t1 AT2G24430 57.962 157 58 4 5 158 15 166 3.91e-56 186
MS.gene89479.t1 AT5G53950 59.627 161 60 3 6 163 17 175 4.64e-56 187
MS.gene89479.t1 AT1G56010 55.828 163 67 3 1 160 14 174 1.27e-55 184
MS.gene89479.t1 AT5G62380 51.235 162 75 2 6 166 7 165 2.40e-55 184
MS.gene89479.t1 AT5G62380 51.235 162 75 2 6 166 7 165 2.40e-55 184
MS.gene89479.t1 AT3G04070 44.279 201 75 5 5 170 9 207 2.58e-55 185
MS.gene89479.t1 AT2G46770 41.778 225 97 5 6 217 16 219 4.55e-55 184
MS.gene89479.t1 AT3G29035 57.516 153 62 2 4 155 22 172 5.86e-55 182
MS.gene89479.t1 AT3G12977 53.165 158 72 1 1 158 13 168 2.28e-54 180
MS.gene89479.t1 AT1G01720 56.051 157 63 4 4 157 5 158 2.60e-54 180
MS.gene89479.t1 AT5G63790 54.375 160 66 3 2 157 46 202 2.61e-54 181
MS.gene89479.t1 AT1G79580 52.564 156 68 3 4 157 15 166 2.81e-54 182
MS.gene89479.t1 AT1G79580 52.564 156 68 3 4 157 15 166 2.81e-54 182
MS.gene89479.t1 AT1G79580 52.564 156 68 3 4 157 15 166 2.81e-54 182
MS.gene89479.t1 AT1G79580 52.564 156 68 3 4 157 15 166 2.81e-54 182
MS.gene89479.t1 AT1G79580 52.564 156 68 3 4 157 15 166 2.81e-54 182
MS.gene89479.t1 AT3G15170 48.718 195 86 4 6 197 20 203 2.84e-54 181
MS.gene89479.t1 AT1G34180 52.174 161 75 2 8 168 18 176 2.99e-54 184
MS.gene89479.t1 AT5G63790 54.375 160 66 3 2 157 56 212 3.14e-54 181
MS.gene89479.t1 AT1G34190 52.174 161 75 2 8 168 18 176 7.53e-54 186
MS.gene89479.t1 AT3G15510 49.180 183 72 5 10 180 21 194 9.49e-54 181
MS.gene89479.t1 AT5G24590 53.797 158 71 2 1 157 8 164 1.10e-53 183
MS.gene89479.t1 AT3G49530 42.857 238 107 7 5 227 12 235 1.36e-53 182
MS.gene89479.t1 AT3G49530 42.857 238 107 7 5 227 12 235 1.95e-53 182
MS.gene89479.t1 AT3G61910 49.405 168 66 3 6 157 11 175 2.11e-53 179
MS.gene89479.t1 AT1G34180 52.174 161 75 2 8 168 18 176 2.65e-53 184
MS.gene89479.t1 AT5G64060 51.899 158 75 1 1 158 1 157 2.87e-53 179
MS.gene89479.t1 AT2G33480 54.545 154 64 2 4 157 13 160 4.97e-53 176
MS.gene89479.t1 AT1G32770 49.080 163 71 3 6 157 16 177 6.49e-53 178
MS.gene89479.t1 AT5G18270 55.844 154 64 3 6 157 21 172 6.77e-53 178
MS.gene89479.t1 AT1G77450 52.353 170 76 4 2 169 6 172 6.91e-53 175
MS.gene89479.t1 AT5G09330 35.110 319 169 5 1 289 1 311 7.43e-53 182
MS.gene89479.t1 AT5G09330 35.110 319 169 5 1 289 1 311 7.43e-53 182
MS.gene89479.t1 AT5G09330 35.110 319 169 5 1 289 1 311 7.43e-53 182
MS.gene89479.t1 AT5G09330 35.110 319 169 5 1 289 1 311 7.43e-53 182
MS.gene89479.t1 AT5G09330 35.110 319 169 5 1 289 1 311 7.43e-53 182
MS.gene89479.t1 AT1G61110 52.023 173 64 6 6 163 16 184 2.32e-52 176
MS.gene89479.t1 AT2G33480 54.545 154 62 3 4 157 13 158 2.55e-52 174
MS.gene89479.t1 AT5G18270 55.195 154 65 3 6 157 21 172 2.67e-52 176
MS.gene89479.t1 AT5G39820 44.693 179 75 3 8 164 22 198 2.55e-51 174
MS.gene89479.t1 AT1G26870 51.534 163 67 3 6 158 16 176 4.31e-51 175
MS.gene89479.t1 AT1G34180 48.555 173 75 3 8 168 18 188 4.61e-51 176
MS.gene89479.t1 AT1G34180 48.555 173 75 3 8 168 18 188 3.65e-50 176
MS.gene89479.t1 AT3G04060 53.896 154 67 3 6 157 20 171 5.28e-49 167
MS.gene89479.t1 AT2G02450 50.993 151 68 3 8 157 53 198 6.72e-49 169
MS.gene89479.t1 AT2G27300 52.564 156 65 3 1 156 9 155 6.81e-49 167
MS.gene89479.t1 AT2G43000 50.955 157 72 2 2 158 17 168 7.43e-49 166
MS.gene89479.t1 AT2G02450 50.993 151 68 3 8 157 53 198 8.12e-49 169
MS.gene89479.t1 AT3G44290 50.318 157 69 3 2 158 10 157 5.06e-48 162
MS.gene89479.t1 AT5G13180 54.487 156 62 4 4 157 12 160 8.47e-48 162
MS.gene89479.t1 AT3G44290 50.318 157 69 3 2 158 10 157 3.33e-47 163
MS.gene89479.t1 AT1G32870 53.049 164 73 3 6 168 10 170 6.68e-47 166
MS.gene89479.t1 AT1G32870 53.049 164 73 3 6 168 10 170 8.66e-47 166
MS.gene89479.t1 AT1G32870 53.049 164 73 3 6 168 46 206 1.29e-46 166
MS.gene89479.t1 AT1G52880 52.500 160 63 4 10 158 21 178 1.83e-46 160
MS.gene89479.t1 AT5G22290 48.052 154 72 3 1 154 16 161 3.35e-46 160
MS.gene89479.t1 AT4G28530 49.708 171 59 5 6 157 10 172 4.27e-46 160
MS.gene89479.t1 AT2G17040 44.586 157 76 3 8 161 8 156 2.19e-43 151
MS.gene89479.t1 AT5G04395 45.098 153 70 2 2 140 24 176 1.28e-41 144
MS.gene89479.t1 AT3G12910 45.833 168 72 5 8 159 23 187 6.20e-41 145
MS.gene89479.t1 AT1G56010 62.000 100 36 1 63 160 8 107 1.57e-36 132
MS.gene89479.t1 AT4G01520 40.385 156 82 4 4 154 2 151 1.41e-34 129
MS.gene89479.t1 AT4G10350 58.333 96 37 2 63 157 20 113 3.18e-34 127
MS.gene89479.t1 AT5G61430 58.763 97 39 1 63 158 8 104 4.00e-34 127
MS.gene89479.t1 AT3G12977 58.947 95 39 0 63 157 20 114 2.32e-33 123
MS.gene89479.t1 AT4G01540 39.735 151 80 4 9 154 7 151 7.04e-32 124
MS.gene89479.t1 AT4G01540 39.735 151 80 4 9 154 7 151 7.38e-32 123
MS.gene89479.t1 AT4G01540 39.735 151 80 4 9 154 7 151 8.42e-32 124
MS.gene89479.t1 AT4G01540 39.735 151 80 4 9 154 7 151 1.23e-31 124
MS.gene89479.t1 AT2G33480 56.842 95 40 1 63 157 10 103 2.25e-31 118
MS.gene89479.t1 AT5G22380 36.453 203 114 7 9 196 8 210 2.29e-31 118
MS.gene89479.t1 AT4G01550 40.523 153 81 3 9 157 7 153 7.85e-31 122
MS.gene89479.t1 AT3G44350 38.217 157 93 4 6 158 5 161 1.16e-29 114
MS.gene89479.t1 AT3G04420 34.518 197 113 6 4 190 1 191 3.38e-29 114
MS.gene89479.t1 AT4G28530 53.211 109 33 2 6 98 10 116 5.29e-29 114
MS.gene89479.t1 AT1G02230 38.462 156 83 6 4 154 1 148 8.58e-29 114
MS.gene89479.t1 AT3G04420 34.518 197 113 6 4 190 1 191 1.15e-28 114
MS.gene89479.t1 AT5G64530 42.424 132 60 4 4 133 1 118 7.23e-28 107
MS.gene89479.t1 AT5G64530 42.424 132 60 4 4 133 1 118 1.77e-27 107
MS.gene89479.t1 AT1G02250 34.615 156 89 5 4 154 1 148 7.36e-26 106
MS.gene89479.t1 AT3G44350 35.897 156 96 4 6 157 5 160 1.03e-25 101
MS.gene89479.t1 AT1G02220 35.714 154 88 4 4 155 1 145 1.10e-25 106
MS.gene89479.t1 AT3G10490 39.103 156 83 5 81 225 2 156 2.24e-25 105
MS.gene89479.t1 AT3G10490 39.103 156 83 5 81 225 2 156 2.24e-25 105
MS.gene89479.t1 AT1G01010 36.478 159 77 6 9 154 6 153 8.12e-23 99.0
MS.gene89479.t1 AT2G43000 48.864 88 45 0 70 157 2 89 1.38e-20 88.6
MS.gene89479.t1 AT3G55210 35.366 164 87 6 5 155 10 167 1.52e-20 90.5
MS.gene89479.t1 AT2G18060 50.000 82 38 2 86 167 2 80 3.62e-19 86.7
MS.gene89479.t1 AT3G56530 31.169 154 100 3 4 155 50 199 4.15e-19 87.0
MS.gene89479.t1 AT5G50820 31.250 176 102 6 4 173 15 177 4.43e-18 81.6
MS.gene89479.t1 AT3G04430 34.459 148 83 5 12 147 6 151 8.24e-17 78.2
MS.gene89479.t1 AT5G14000 30.872 149 93 3 4 150 13 153 3.07e-16 75.5
MS.gene89479.t1 AT5G14000 32.576 132 83 2 4 133 13 140 3.56e-15 73.9
MS.gene89479.t1 AT5G22290 50.000 68 27 2 87 154 2 62 2.83e-14 72.0

Find 74 sgRNAs with CRISPR-Local

Find 178 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGCATCACATGGAAATTT+TGG 0.149659 2.4:+29276737 None:intergenic
CTACCCTTCAAATTTATTTC+AGG 0.177248 2.4:-29276582 MS.gene89479:intron
TGACTCTTCCACCTGGATTC+AGG 0.261369 2.4:-29278646 MS.gene89479:CDS
CTATTTGTTCTTGACCCATT+TGG 0.270391 2.4:+29278308 None:intergenic
GAGAAATCTTCCATCATTAA+AGG 0.281728 2.4:+29274975 None:intergenic
GAGCAACAAGAGGTGGTTAT+TGG 0.284107 2.4:-29278286 MS.gene89479:CDS
ATTTCTTCCTAGCAAGGATA+TGG 0.291890 2.4:-29278366 MS.gene89479:CDS
TTTGGATACTTTCTATCTCT+TGG 0.302528 2.4:+29278326 None:intergenic
AAGAGAAGTAATGCAAACTA+TGG 0.358125 2.4:-29276789 MS.gene89479:CDS
TGCTTCTCTCTCCTCTTTGA+AGG 0.370437 2.4:-29278114 MS.gene89479:intron
GGAAAGCAACTGGAAAAGAT+AGG 0.389822 2.4:-29278265 MS.gene89479:CDS
TAATGAAGAGGAACAAGTTA+AGG 0.412340 2.4:-29276885 MS.gene89479:CDS
CCCTCAAACACCTTTAATGA+TGG 0.418490 2.4:-29274985 MS.gene89479:CDS
AAGCAGTCATGAGATATATC+AGG 0.420403 2.4:+29274924 None:intergenic
AGAGATAGAAAGTATCCAAA+TGG 0.427350 2.4:-29278323 MS.gene89479:CDS
AATCCAGGTGGAAGAGTCAT+TGG 0.438753 2.4:+29278650 None:intergenic
GTTACCTGAAATAAATTTGA+AGG 0.439712 2.4:+29276578 None:intergenic
GAAAATTCGACACAATGAAT+AGG 0.442423 2.4:+29276937 None:intergenic
GGTGGTTATTGGAAAGCAAC+TGG 0.443966 2.4:-29278275 MS.gene89479:CDS
TCTCTATAAATGTGAACCTT+GGG 0.451056 2.4:-29278531 MS.gene89479:CDS
ATATTCATGCATAACCCAAT+TGG 0.452860 2.4:+29278160 None:intergenic
CTCATGGGATTAGAACCAAT+TGG 0.456147 2.4:-29278175 MS.gene89479:CDS
ATCTCTATAAATGTGAACCT+TGG 0.459278 2.4:-29278532 MS.gene89479:CDS
TTCAGCTATTTCTTATCCAA+TGG 0.459398 2.4:-29276612 MS.gene89479:CDS
CCATCATTAAAGGTGTTTGA+GGG 0.461445 2.4:+29274985 None:intergenic
TCCATCATTAAAGGTGTTTG+AGG 0.468229 2.4:+29274984 None:intergenic
TCAGCTATTTCTTATCCAAT+GGG 0.470769 2.4:-29276611 MS.gene89479:CDS
TCATGGGATTAGAACCAATT+GGG 0.493990 2.4:-29278174 MS.gene89479:CDS
AACTCTCAAAAGAAACAAGT+TGG 0.494236 2.4:-29278236 MS.gene89479:CDS
AAATACAGAGACTGTATGAA+TGG 0.500184 2.4:-29274891 MS.gene89479:CDS
GAGATAGAAAGTATCCAAAT+GGG 0.506144 2.4:-29278322 MS.gene89479:CDS
GATATAGAAATACCTATGTA+TGG 0.506641 2.4:-29275026 MS.gene89479:CDS
GAAGGGTAGCTTATTCCCAT+TGG 0.508821 2.4:+29276596 None:intergenic
ATGTGATGCTTCTTCATCTG+AGG 0.512565 2.4:-29276726 MS.gene89479:CDS
GCAACAAGTTCTTCATCTGT+AGG 0.512741 2.4:+29278617 None:intergenic
ATATTATTACATGTATCTGT+TGG 0.528216 2.4:+29276683 None:intergenic
CAACAAGTTCTTCATCTGTA+GGG 0.531691 2.4:+29278618 None:intergenic
GGATACAAAGAAGGAAATGA+TGG 0.533065 2.4:-29276864 MS.gene89479:CDS
CGACTTATTGAATCACATCC+TGG 0.543656 2.4:-29278137 MS.gene89479:CDS
AAGATCATTTCTTCCTAGCA+AGG 0.548567 2.4:-29278372 MS.gene89479:CDS
ACAAGTTAAGGATACAAAGA+AGG 0.556054 2.4:-29276873 MS.gene89479:CDS
GAAAGCAACTGGAAAAGATA+GGG 0.558131 2.4:-29278264 MS.gene89479:CDS
AAGACACTTGTTTATTACAA+AGG 0.562015 2.4:-29278206 MS.gene89479:CDS
CTTAATATGTACCTTCAAAG+AGG 0.562317 2.4:+29278103 None:intergenic
GTAGGGTGGAACCTGAATCC+AGG 0.574340 2.4:+29278635 None:intergenic
TTACCTGAAATAAATTTGAA+GGG 0.575453 2.4:+29276579 None:intergenic
TCTTCATCTGAGGTCACTCA+AGG 0.581348 2.4:-29276716 MS.gene89479:CDS
TGTGAACCTTGGGATTTACC+AGG 0.585259 2.4:-29278521 MS.gene89479:intron
TTCCTCTCAAGATCATTCTG+TGG 0.587376 2.4:-29274841 MS.gene89479:CDS
TACCACTCCATATCCTTGCT+AGG 0.589851 2.4:+29278359 None:intergenic
TACAAAGGTAGAGCACCTCA+TGG 0.591677 2.4:-29278191 MS.gene89479:CDS
AATGTACCTGGTAAATCCCA+AGG 0.593393 2.4:+29278515 None:intergenic
GCTCCAATGACTCTTCCACC+TGG 0.596077 2.4:-29278653 MS.gene89479:CDS
TTATAGAAGCCACCATACAT+AGG 0.598247 2.4:+29275014 None:intergenic
TAATAATCATTCTATGGCAT+AGG 0.598308 2.4:+29274813 None:intergenic
GTCTTAGAAGAACAAGTGCA+AGG 0.598803 2.4:-29276842 MS.gene89479:CDS
AGCCACAGAATGATCTTGAG+AGG 0.603596 2.4:+29274839 None:intergenic
TCTTAGAAGAACAAGTGCAA+GGG 0.610254 2.4:-29276841 MS.gene89479:CDS
ACAAATAGAGCAACAAGAGG+TGG 0.614366 2.4:-29278293 MS.gene89479:CDS
AAAGAGGAGAGAGAAGCACC+AGG 0.615946 2.4:+29278119 None:intergenic
ACAAAGGTAGAGCACCTCAT+GGG 0.636035 2.4:-29278190 MS.gene89479:CDS
TTCCTAGCAAGGATATGGAG+TGG 0.642089 2.4:-29278361 MS.gene89479:CDS
ATAGAAATACCTATGTATGG+TGG 0.647987 2.4:-29275023 MS.gene89479:CDS
CTTAGAAGAACAAGTGCAAG+GGG 0.650573 2.4:-29276840 MS.gene89479:CDS
CAAGTTCTTCATCTGTAGGG+TGG 0.653084 2.4:+29278621 None:intergenic
TGTGCATGAAAATCCTCTGT+GGG 0.661578 2.4:+29276659 None:intergenic
CAAGGGGAAGACTCAAGTGG+TGG 0.675596 2.4:-29276824 MS.gene89479:CDS
AGAACAAATAGAGCAACAAG+AGG 0.677656 2.4:-29278296 MS.gene89479:CDS
GTGCAAGGGGAAGACTCAAG+TGG 0.679628 2.4:-29276827 MS.gene89479:CDS
TCAGATGAAGAAGCATCACA+TGG 0.689871 2.4:+29276728 None:intergenic
TTGTGCATGAAAATCCTCTG+TGG 0.696517 2.4:+29276658 None:intergenic
GGGTGGAACCTGAATCCAGG+TGG 0.704732 2.4:+29278638 None:intergenic
CAATTGGTTCTAATCCCATG+AGG 0.731060 2.4:+29278176 None:intergenic
ATGTAATAATATACCCACAG+AGG 0.747259 2.4:-29276672 MS.gene89479:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTGATTAATACATAAT+AGG + chr2.4:29277297-29277316 None:intergenic 10.0%
!! AATTTGATTAATACATAATA+GGG + chr2.4:29277296-29277315 None:intergenic 10.0%
!! ATTATGTATTAATCAAATTT+AGG - chr2.4:29277297-29277316 MS.gene89479:intron 10.0%
!! TATAAAGAAAAAGAAAATAA+AGG + chr2.4:29276225-29276244 None:intergenic 10.0%
!! TTATGTATTAATCAAATTTA+GGG - chr2.4:29277298-29277317 MS.gene89479:intron 10.0%
!!! AATTGTATATATGATTTTTA+AGG + chr2.4:29277013-29277032 None:intergenic 10.0%
!!! AGATAGATTTTTTTTTTTTT+TGG + chr2.4:29275774-29275793 None:intergenic 10.0%
!!! TAATTTTACATGTAAATTTT+TGG - chr2.4:29277490-29277509 MS.gene89479:intron 10.0%
!! AAAATTAAACACTATGATAT+TGG + chr2.4:29276420-29276439 None:intergenic 15.0%
!! TAATGTTATGAAAAAATTTC+AGG - chr2.4:29276517-29276536 MS.gene89479:intron 15.0%
!! TACATAATTCAACATAAATT+TGG - chr2.4:29278220-29278239 MS.gene89479:CDS 15.0%
!!! AAATTGAATTTTTTCATAGA+TGG - chr2.4:29275986-29276005 MS.gene89479:intron 15.0%
!!! AAATTTTTGGATTTTATCAA+TGG - chr2.4:29277503-29277522 MS.gene89479:intron 15.0%
!!! ATTTATTTTTGTATCCTTTT+AGG + chr2.4:29276015-29276034 None:intergenic 15.0%
!!! TGTTACTTAATAAGATTATT+TGG - chr2.4:29276936-29276955 MS.gene89479:CDS 15.0%
!!! TTTAAGGTTGTTTTAATTAA+AGG + chr2.4:29276997-29277016 None:intergenic 15.0%
!!! TTTATTTTTGTATCCTTTTA+GGG + chr2.4:29276014-29276033 None:intergenic 15.0%
!! AAATATACTCCAAAAAATAG+AGG + chr2.4:29277452-29277471 None:intergenic 20.0%
!! AGAAATAACTAAATAGAACT+AGG - chr2.4:29275598-29275617 MS.gene89479:intron 20.0%
!! ATATTATTACATGTATCTGT+TGG + chr2.4:29276800-29276819 None:intergenic 20.0%
!! ATGAATCTATTAGATTAGTA+GGG - chr2.4:29277129-29277148 MS.gene89479:intron 20.0%
!! CATTATTTGTGTCATAATAA+AGG - chr2.4:29275651-29275670 MS.gene89479:intron 20.0%
!! CTGCAAATAAATTCAAATAA+TGG + chr2.4:29275087-29275106 None:intergenic 20.0%
!! GAAATAACTAAATAGAACTA+GGG - chr2.4:29275599-29275618 MS.gene89479:intron 20.0%
!! TACTTAGAAAGAAAAATAAC+AGG - chr2.4:29274890-29274909 MS.gene89479:CDS 20.0%
!! TTACCTGAAATAAATTTGAA+GGG + chr2.4:29276904-29276923 None:intergenic 20.0%
!! TTTATTGTATGTAACATTTG+TGG + chr2.4:29277337-29277356 None:intergenic 20.0%
!!! ATAATTTTCGTCGATAAATT+TGG - chr2.4:29278305-29278324 MS.gene89479:CDS 20.0%
!!! ATTATTTTAAGAAATGTACC+TGG + chr2.4:29274980-29274999 None:intergenic 20.0%
!!! GTTTTGATGAAAATAGAATT+TGG - chr2.4:29275905-29275924 MS.gene89479:intron 20.0%
!!! TAACATTACTTAGCTTTTAA+AGG + chr2.4:29276505-29276524 None:intergenic 20.0%
!!! TTAATCTTCTCTTTTTAAGA+AGG - chr2.4:29275524-29275543 MS.gene89479:intron 20.0%
! AAACTCAAAAATAAGCTATG+TGG + chr2.4:29277530-29277549 None:intergenic 25.0%
! AAAGTGATGTACTTGATTTA+TGG + chr2.4:29277980-29277999 None:intergenic 25.0%
! AACATTAACTCCTAATTAGA+AGG + chr2.4:29275834-29275853 None:intergenic 25.0%
! AACTCAAAAATAAGCTATGT+GGG + chr2.4:29277529-29277548 None:intergenic 25.0%
! AAGACACTTGTTTATTACAA+AGG - chr2.4:29275274-29275293 MS.gene89479:intron 25.0%
! AAGCAAATGTATAACAAGAT+TGG + chr2.4:29276366-29276385 None:intergenic 25.0%
! AAGTGATGTACTTGATTTAT+GGG + chr2.4:29277979-29277998 None:intergenic 25.0%
! ACATATGAAAAAGCAAAAGT+GGG - chr2.4:29277153-29277172 MS.gene89479:intron 25.0%
! ACATTAACTCCTAATTAGAA+GGG + chr2.4:29275833-29275852 None:intergenic 25.0%
! AGCAATATATGCATTTGATT+GGG - chr2.4:29277923-29277942 MS.gene89479:intron 25.0%
! AGTCAGTCAAAAGAAATTAT+AGG + chr2.4:29277670-29277689 None:intergenic 25.0%
! ATCTTAAAGTGATGAAAGTT+GGG - chr2.4:29277558-29277577 MS.gene89479:intron 25.0%
! ATGTATAACAAGATTGGAAA+AGG + chr2.4:29276360-29276379 None:intergenic 25.0%
! ATTTGTGTCATAATAAAGGA+GGG - chr2.4:29275655-29275674 MS.gene89479:intron 25.0%
! CATGAATCTATTAGATTAGT+AGG - chr2.4:29277128-29277147 MS.gene89479:intron 25.0%
! CATTATTATATTGATCTGCT+TGG - chr2.4:29277189-29277208 MS.gene89479:intron 25.0%
! GATATAGAAATACCTATGTA+TGG - chr2.4:29278454-29278473 MS.gene89479:intron 25.0%
! GTCAGTCAAAAGAAATTATA+GGG + chr2.4:29277669-29277688 None:intergenic 25.0%
! GTTACCTGAAATAAATTTGA+AGG + chr2.4:29276905-29276924 None:intergenic 25.0%
! TACAATTGATTGTGATTGTT+TGG - chr2.4:29277026-29277045 MS.gene89479:intron 25.0%
! TATTTGTGTCATAATAAAGG+AGG - chr2.4:29275654-29275673 MS.gene89479:intron 25.0%
! TCAAAAGAAATTATAGGGAA+TGG + chr2.4:29277664-29277683 None:intergenic 25.0%
! TCCAACAAAAAATAATGAAG+AGG - chr2.4:29276583-29276602 MS.gene89479:CDS 25.0%
! TGAATCTATTAGATTAGTAG+GGG - chr2.4:29277130-29277149 MS.gene89479:intron 25.0%
!! ACTATAGCTTTTGCTAAAAT+TGG + chr2.4:29277853-29277872 None:intergenic 25.0%
!! GACTAGTGATATACAAATTT+TGG + chr2.4:29276075-29276094 None:intergenic 25.0%
!! TGAACTATTTTCTTCTTCAT+AGG + chr2.4:29276852-29276871 None:intergenic 25.0%
!! TGAGCTTTATAAAAAGATTG+AGG + chr2.4:29277597-29277616 None:intergenic 25.0%
!!! AGAAAGTTACCTCTATTTTT+TGG - chr2.4:29277440-29277459 MS.gene89479:intron 25.0%
!!! ATGTTAGCTTGGTAATTTTT+AGG - chr2.4:29275550-29275569 MS.gene89479:intron 25.0%
!!! GCATTTTTTTTTAATGATGC+AGG - chr2.4:29278432-29278451 MS.gene89479:intron 25.0%
!!! TCCTCTTCATTATTTTTTGT+TGG + chr2.4:29276587-29276606 None:intergenic 25.0%
AAAGATGTATCTTAGTGGTT+TGG + chr2.4:29277786-29277805 None:intergenic 30.0%
AAATACAGAGACTGTATGAA+TGG - chr2.4:29278589-29278608 MS.gene89479:CDS 30.0%
AACAAGATTGGAAAAGGAAA+AGG + chr2.4:29276354-29276373 None:intergenic 30.0%
AACTCTCAAAAGAAACAAGT+TGG - chr2.4:29275244-29275263 MS.gene89479:intron 30.0%
AAGAGAAGTAATGCAAACTA+TGG - chr2.4:29276691-29276710 MS.gene89479:CDS 30.0%
AAGCTAAAGATGTATCTTAG+TGG + chr2.4:29277791-29277810 None:intergenic 30.0%
ACAAGATTGGAAAAGGAAAA+GGG + chr2.4:29276353-29276372 None:intergenic 30.0%
ACAAGTTAAGGATACAAAGA+AGG - chr2.4:29276607-29276626 MS.gene89479:CDS 30.0%
ATAGAAATACCTATGTATGG+TGG - chr2.4:29278457-29278476 MS.gene89479:intron 30.0%
ATATTCATGCATAACCCAAT+TGG + chr2.4:29275323-29275342 None:intergenic 30.0%
ATCTCTATAAATGTGAACCT+TGG - chr2.4:29274948-29274967 MS.gene89479:CDS 30.0%
ATGGTGAAGAAAAGCTAAAT+TGG + chr2.4:29277645-29277664 None:intergenic 30.0%
ATGTAATAATATACCCACAG+AGG - chr2.4:29276808-29276827 MS.gene89479:CDS 30.0%
ATTGGAACTAAAGTTACTCT+TGG + chr2.4:29278078-29278097 None:intergenic 30.0%
ATTTCTATTGTAGAGGCTTT+AGG + chr2.4:29278022-29278041 None:intergenic 30.0%
CATATGAAAAAGCAAAAGTG+GGG - chr2.4:29277154-29277173 MS.gene89479:intron 30.0%
CATTAACTCCTAATTAGAAG+GGG + chr2.4:29275832-29275851 None:intergenic 30.0%
CTACCCTTCAAATTTATTTC+AGG - chr2.4:29276898-29276917 MS.gene89479:CDS 30.0%
CTTAATATGTACCTTCAAAG+AGG + chr2.4:29275380-29275399 None:intergenic 30.0%
GAAAATTCGACACAATGAAT+AGG + chr2.4:29276546-29276565 None:intergenic 30.0%
GACATATGAAAAAGCAAAAG+TGG - chr2.4:29277152-29277171 MS.gene89479:intron 30.0%
GAGAAATCTTCCATCATTAA+AGG + chr2.4:29278508-29278527 None:intergenic 30.0%
GAGCAATATATGCATTTGAT+TGG - chr2.4:29277922-29277941 MS.gene89479:intron 30.0%
GAGTAAAGAGATCTTTACTT+TGG + chr2.4:29277711-29277730 None:intergenic 30.0%
GATCTTAAAGTGATGAAAGT+TGG - chr2.4:29277557-29277576 MS.gene89479:intron 30.0%
GCAATATATGCATTTGATTG+GGG - chr2.4:29277924-29277943 MS.gene89479:intron 30.0%
TAAGAAGGAATATGTTAGCT+TGG - chr2.4:29275539-29275558 MS.gene89479:intron 30.0%
TAATGAAGAGGAACAAGTTA+AGG - chr2.4:29276595-29276614 MS.gene89479:CDS 30.0%
TCTCTATAAATGTGAACCTT+GGG - chr2.4:29274949-29274968 MS.gene89479:CDS 30.0%
TGATTAATACATAATAGGGC+TGG + chr2.4:29277292-29277311 None:intergenic 30.0%
TTAAAGCAAGCACTAAACAA+CGG + chr2.4:29276051-29276070 None:intergenic 30.0%
TTGGAACTAAAGTTACTCTT+GGG + chr2.4:29278077-29278096 None:intergenic 30.0%
TTTGGATACTTTCTATCTCT+TGG + chr2.4:29275157-29275176 None:intergenic 30.0%
! AACTTTAGTTCCAATTAGCT+AGG - chr2.4:29278083-29278102 MS.gene89479:intron 30.0%
! TCTCTCTCTCTAATTTTCAT+TGG + chr2.4:29277423-29277442 None:intergenic 30.0%
! TGTATATCACTAGTCTATAC+AGG - chr2.4:29276080-29276099 MS.gene89479:intron 30.0%
! TTCGTGAGAGAATTTGAAAT+TGG - chr2.4:29275460-29275479 MS.gene89479:intron 30.0%
!! AGAGATAGAAAGTATCCAAA+TGG - chr2.4:29275157-29275176 MS.gene89479:intron 30.0%
!! GAGATAGAAAGTATCCAAAT+GGG - chr2.4:29275158-29275177 MS.gene89479:intron 30.0%
!! TAGGGTTATTTCTATTGTAG+AGG + chr2.4:29278029-29278048 None:intergenic 30.0%
!! TCAGCTATTTCTTATCCAAT+GGG - chr2.4:29276869-29276888 MS.gene89479:CDS 30.0%
!! TTCAGCTATTTCTTATCCAA+TGG - chr2.4:29276868-29276887 MS.gene89479:CDS 30.0%
!!! ACTAGGGTTTTGAAGAAAAT+AGG - chr2.4:29275615-29275634 MS.gene89479:intron 30.0%
AACAAACCGTGAGGAAAAAT+GGG + chr2.4:29277733-29277752 None:intergenic 35.0%
AAGATCATTTCTTCCTAGCA+AGG - chr2.4:29275108-29275127 MS.gene89479:intron 35.0%
AAGCAGTCATGAGATATATC+AGG + chr2.4:29278559-29278578 None:intergenic 35.0%
AGAACAAATAGAGCAACAAG+AGG - chr2.4:29275184-29275203 MS.gene89479:intron 35.0%
ATAACTCATGCCTAGCTAAT+TGG + chr2.4:29278096-29278115 None:intergenic 35.0%
ATTTCTTCCTAGCAAGGATA+TGG - chr2.4:29275114-29275133 MS.gene89479:intron 35.0%
CAACAAGTTCTTCATCTGTA+GGG + chr2.4:29274865-29274884 None:intergenic 35.0%
CTATTTGTTCTTGACCCATT+TGG + chr2.4:29275175-29275194 None:intergenic 35.0%
GAAAGCAACTGGAAAAGATA+GGG - chr2.4:29275216-29275235 MS.gene89479:intron 35.0%
GAAATGCAGAGTATAAGCAA+AGG + chr2.4:29277270-29277289 None:intergenic 35.0%
GAACATATAGTGACTAGTGT+AGG + chr2.4:29276203-29276222 None:intergenic 35.0%
GAGCATAAATGCTACAAACA+TGG + chr2.4:29277237-29277256 None:intergenic 35.0%
GGATACAAAGAAGGAAATGA+TGG - chr2.4:29276616-29276635 MS.gene89479:CDS 35.0%
GGTTGCTGTATACAAATAGT+AGG - chr2.4:29275700-29275719 MS.gene89479:intron 35.0%
TAACAAACCGTGAGGAAAAA+TGG + chr2.4:29277734-29277753 None:intergenic 35.0%
TCATGGGATTAGAACCAATT+GGG - chr2.4:29275306-29275325 MS.gene89479:intron 35.0%
TCTTAGAAGAACAAGTGCAA+GGG - chr2.4:29276639-29276658 MS.gene89479:CDS 35.0%
TGCTACAAACATGGAGAAAA+AGG + chr2.4:29277228-29277247 None:intergenic 35.0%
TTATAGAAGCCACCATACAT+AGG + chr2.4:29278469-29278488 None:intergenic 35.0%
TTCATAGATGGAACCCTAAA+AGG - chr2.4:29275998-29276017 MS.gene89479:intron 35.0%
! AACAGTTGATTTCGGTTGTT+AGG - chr2.4:29275679-29275698 MS.gene89479:intron 35.0%
!! ATTTTTCCTCACGGTTTGTT+AGG - chr2.4:29277733-29277752 MS.gene89479:intron 35.0%
!! CCATCATTAAAGGTGTTTGA+GGG + chr2.4:29278498-29278517 None:intergenic 35.0%
!! GAAGCATCACATGGAAATTT+TGG + chr2.4:29276746-29276765 None:intergenic 35.0%
!! GCTCACTTCTAAAATTCACT+TGG - chr2.4:29277612-29277631 MS.gene89479:intron 35.0%
!! GTTTTGAACCTTGTTCTACA+AGG - chr2.4:29276168-29276187 MS.gene89479:intron 35.0%
!! TCCATCATTAAAGGTGTTTG+AGG + chr2.4:29278499-29278518 None:intergenic 35.0%
!! TTTACTCCCATTTTTCCTCA+CGG - chr2.4:29277724-29277743 MS.gene89479:intron 35.0%
AATGTACCTGGTAAATCCCA+AGG + chr2.4:29274968-29274987 None:intergenic 40.0%
ACAAATAGAGCAACAAGAGG+TGG - chr2.4:29275187-29275206 MS.gene89479:intron 40.0%
ATGTGATGCTTCTTCATCTG+AGG - chr2.4:29276754-29276773 MS.gene89479:CDS 40.0%
ATGTGCATCCTTGTAGAACA+AGG + chr2.4:29276179-29276198 None:intergenic 40.0%
CAAGTGGCAAAAGAAGAGTA+GGG + chr2.4:29278047-29278066 None:intergenic 40.0%
CCCTCAAACACCTTTAATGA+TGG - chr2.4:29278495-29278514 MS.gene89479:intron 40.0%
CGACTTATTGAATCACATCC+TGG - chr2.4:29275343-29275362 MS.gene89479:intron 40.0%
CTCATGGGATTAGAACCAAT+TGG - chr2.4:29275305-29275324 MS.gene89479:intron 40.0%
CTTAGAAGAACAAGTGCAAG+GGG - chr2.4:29276640-29276659 MS.gene89479:CDS 40.0%
GCAACAAGTTCTTCATCTGT+AGG + chr2.4:29274866-29274885 None:intergenic 40.0%
GGAAAGCAACTGGAAAAGAT+AGG - chr2.4:29275215-29275234 MS.gene89479:intron 40.0%
GTCTTAGAAGAACAAGTGCA+AGG - chr2.4:29276638-29276657 MS.gene89479:CDS 40.0%
TGTGCATGAAAATCCTCTGT+GGG + chr2.4:29276824-29276843 None:intergenic 40.0%
TGTGTTGTCCCCTTCTAATT+AGG - chr2.4:29275821-29275840 MS.gene89479:intron 40.0%
TTCCTCTCAAGATCATTCTG+TGG - chr2.4:29278639-29278658 MS.gene89479:CDS 40.0%
TTGAAACCTAACAAACCGTG+AGG + chr2.4:29277742-29277761 None:intergenic 40.0%
TTGTGCATGAAAATCCTCTG+TGG + chr2.4:29276825-29276844 None:intergenic 40.0%
! AGGAGGGAAACAGTTGATTT+CGG - chr2.4:29275671-29275690 MS.gene89479:intron 40.0%
!! CAATTGGTTCTAATCCCATG+AGG + chr2.4:29275307-29275326 None:intergenic 40.0%
!! TCAGATGAAGAAGCATCACA+TGG + chr2.4:29276755-29276774 None:intergenic 40.0%
AATCCAGGTGGAAGAGTCAT+TGG + chr2.4:29274833-29274852 None:intergenic 45.0%
ACTCTTGGGAATAGTGCAAG+TGG + chr2.4:29278063-29278082 None:intergenic 45.0%
AGCCACAGAATGATCTTGAG+AGG + chr2.4:29278644-29278663 None:intergenic 45.0%
CAAGTTCTTCATCTGTAGGG+TGG + chr2.4:29274862-29274881 None:intergenic 45.0%
GAAGGGTAGCTTATTCCCAT+TGG + chr2.4:29276887-29276906 None:intergenic 45.0%
GAGCAACAAGAGGTGGTTAT+TGG - chr2.4:29275194-29275213 MS.gene89479:intron 45.0%
GCAAGTGGCAAAAGAAGAGT+AGG + chr2.4:29278048-29278067 None:intergenic 45.0%
GGTGGTTATTGGAAAGCAAC+TGG - chr2.4:29275205-29275224 MS.gene89479:intron 45.0%
TACCACTCCATATCCTTGCT+AGG + chr2.4:29275124-29275143 None:intergenic 45.0%
TGCTTCTCTCTCCTCTTTGA+AGG - chr2.4:29275366-29275385 MS.gene89479:intron 45.0%
TGTGAACCTTGGGATTTACC+AGG - chr2.4:29274959-29274978 MS.gene89479:CDS 45.0%
TTCCTAGCAAGGATATGGAG+TGG - chr2.4:29275119-29275138 MS.gene89479:intron 45.0%
! ACAAAGGTAGAGCACCTCAT+GGG - chr2.4:29275290-29275309 MS.gene89479:intron 45.0%
! TACAAAGGTAGAGCACCTCA+TGG - chr2.4:29275289-29275308 MS.gene89479:intron 45.0%
! TCTTCATCTGAGGTCACTCA+AGG - chr2.4:29276764-29276783 MS.gene89479:CDS 45.0%
!!! TTTTTTTTTTTTTTTACTTA+AGG - chr2.4:29275856-29275875 MS.gene89479:intron 5.0%
TGACTCTTCCACCTGGATTC+AGG - chr2.4:29274834-29274853 MS.gene89479:CDS 50.0%
!! AAAGAGGAGAGAGAAGCACC+AGG + chr2.4:29275364-29275383 None:intergenic 50.0%
CAAGGGGAAGACTCAAGTGG+TGG - chr2.4:29276656-29276675 MS.gene89479:CDS 55.0%
GCTCCAATGACTCTTCCACC+TGG - chr2.4:29274827-29274846 MS.gene89479:CDS 55.0%
GTAGGGTGGAACCTGAATCC+AGG + chr2.4:29274848-29274867 None:intergenic 55.0%
GTGCAAGGGGAAGACTCAAG+TGG - chr2.4:29276653-29276672 MS.gene89479:CDS 55.0%
GGGTGGAACCTGAATCCAGG+TGG + chr2.4:29274845-29274864 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 29274824 29278678 29274824 ID=MS.gene89479
chr2.4 mRNA 29274824 29278678 29274824 ID=MS.gene89479.t1;Parent=MS.gene89479
chr2.4 exon 29278522 29278678 29278522 ID=MS.gene89479.t1.exon1;Parent=MS.gene89479.t1
chr2.4 CDS 29278522 29278678 29278522 ID=cds.MS.gene89479.t1;Parent=MS.gene89479.t1
chr2.4 exon 29278115 29278395 29278115 ID=MS.gene89479.t1.exon2;Parent=MS.gene89479.t1
chr2.4 CDS 29278115 29278395 29278115 ID=cds.MS.gene89479.t1;Parent=MS.gene89479.t1
chr2.4 exon 29276583 29276963 29276583 ID=MS.gene89479.t1.exon3;Parent=MS.gene89479.t1
chr2.4 CDS 29276583 29276963 29276583 ID=cds.MS.gene89479.t1;Parent=MS.gene89479.t1
chr2.4 exon 29274824 29275048 29274824 ID=MS.gene89479.t1.exon4;Parent=MS.gene89479.t1
chr2.4 CDS 29274824 29275048 29274824 ID=cds.MS.gene89479.t1;Parent=MS.gene89479.t1
Gene Sequence

>MS.gene89479

ATGGCTCCAATGACTCTTCCACCTGGATTCAGGTTCCACCCTACAGATGAAGAACTTGTTGCTTACTACTTAGAAAGAAAAATAACAGGAAGAACTATAGAGCTTGATATCATTGCAGAAGTTGATCTCTATAAATGTGAACCTTGGGATTTACCAGGTACATTTCTTAAAATAATATATAATCATCTCATGCATTCATATTTTTATTTTTAATTTTATATAATTCAGTCATCAAATATATATATGAATAGTAGTAATTTCCATTATTTGAATTTATTTGCAGAAAGATCATTTCTTCCTAGCAAGGATATGGAGTGGTATTTTTATAGTCCAAGAGATAGAAAGTATCCAAATGGGTCAAGAACAAATAGAGCAACAAGAGGTGGTTATTGGAAAGCAACTGGAAAAGATAGGGCAGTGAACTCTCAAAAGAAACAAGTTGGAATGAAGAAGACACTTGTTTATTACAAAGGTAGAGCACCTCATGGGATTAGAACCAATTGGGTTATGCATGAATATCGACTTATTGAATCACATCCTGGTGCTTCTCTCTCCTCTTTGAAGGTACATATTAAGATTTATGTAACATTTTTTTTTTTTTTAACGACAAATGTTAATAATTAGTTGTTAGTAATATTCGTGAGAGAATTTGAAATTGGCATGAAATTATTTCTCTCATTAATATTATCTTGTTCTTCTATTAATCTTCTCTTTTTAAGAAGGAATATGTTAGCTTGGTAATTTTTAGGCTTTGTTTTGTATAAATATCATTTAAGAAATAACTAAATAGAACTAGGGTTTTGAAGAAAATAGGTAATATTATGAAACATTATTTGTGTCATAATAAAGGAGGGAAACAGTTGATTTCGGTTGTTAGGTTGCTGTATACAAATAGTAGGAGAATGATTCTTTTTTTCTCTCTTTATCTATCTTTTATAGTTTTGTAACCAAAAAAAAAAAAAATCTATCTTTTATAGTTTTATGTATAACAATTGAATGTGTTGTCCCCTTCTAATTAGGAGTTAATGTTAGTTTTTTTTTTTTTTTACTTAAGGAGTTTATTTAGTTTTGAGAATGTCTTGTTTTGATGAAAATAGAATTTGGTATTTGAGTTTAAGTATCTATTCTCTTAATTTTATATATCATTTTTTGCTGCTTTAAAAAATTGAATTTTTTCATAGATGGAACCCTAAAAGGATACAAAAATAAATTCATGAGACAAAACCGTTGTTTAGTGCTTGCTTTAATCCAAAATTTGTATATCACTAGTCTATACAGGATTCTTTTGAGATTGATCAGCTTATGTTGTTATCATTATCTCACATAATCAAACTCATCTCTACTGTTTTGAACCTTGTTCTACAAGGATGCACATGCCTACACTAGTCACTATATGTTCCTTTATTTTCTTTTTCTTTATATGATTTGCAAACTTTAATTTTTCTTTTGTCATCTTTAAAAAAATAGCTTATGATCTAAATGTTGTGATGAAAAATTCAGATTCGTGTACGTAGTATTACTATTAACCCTTTTCCTTTTCCAATCTTGTTATACATTTGCTTTATATTTTCTTACTTTTTTCTTGCATTGCATCCAATATCATAGTGTTTAATTTTAAGTACACTCTCAATGTATAGTATGAATTAAATCATTGCTTTTGACTATACAAATAAATGTACCTTTAAAAGCTAAGTAATGTTATGAAAAAATTTCAGGATTCCTATTCATTGTGTCGAATTTTCAAGAAGACAATTCAAATTCCAACAAAAAATAATGAAGAGGAACAAGTTAAGGATACAAAGAAGGAAATGATGGTCTTAGAAGAACAAGTGCAAGGGGAAGACTCAAGTGGTGGCACAGAGATTTCAAGAGAAGTAATGCAAACTATGGATGAAAAAATTCTTAATCAAGATAAACATCCAAAATTTCCATGTGATGCTTCTTCATCTGAGGTCACTCAAGGAACATGTACACCAACAGATACATGTAATAATATACCCACAGAGGATTTTCATGCACAATTTGCCTATGAAGAAGAAAATAGTTCAGCTATTTCTTATCCAATGGGAATAAGCTACCCTTCAAATTTATTTCAGGTAACATTTTTGATACTGTTACTTAATAAGATTATTTGGTAGCATAAAAAAAAGATTATTATTAAAATTATTTACCTTTAATTAAAACAACCTTAAAAATCATATATACAATTGATTGTGATTGTTTGGTAGCATAAAAAAATACTTCAATTTCATAAACTACATGATTGTTTGATTTTGTATTGTAGTAATATTCACGTAGATGTGTCATGAATCTATTAGATTAGTAGGGGACATATGAAAAAGCAAAAGTGGGGTCATAGTATGATCATTATTATATTGATCTGCTTGGTATATTAACTTTTCCTTTTTCTCCATGTTTGTAGCATTTATGCTCATGATGACTTCCTTTGCTTATACTCTGCATTTCCAGCCCTATTATGTATTAATCAAATTTAGGGCTTCATTATCACACCACAAATGTTACATACAATAAATCACTTCTAGTTCTTACTTCACACATTTGCATCAACTTGAAACTTTATAAAAATGTTGAAATGCCAATGAAAATTAGAGAGAGAGAAAGTTACCTCTATTTTTTGGAGTATATTTTAATAGTATATGTCTAAGTAATTTTACATGTAAATTTTTGGATTTTATCAATGGCCCACATAGCTTATTTTTGAGTTTCTCTTTTGATCTTAAAGTGATGAAAGTTGGGAGTATGATGAAGTCCTCAATCTTTTTATAAAGCTCACTTCTAAAATTCACTTGGACTGACTCCAATTTAGCTTTTCTTCACCATTCCCTATAATTTCTTTTGACTGACTATATACTCAAAACGTTTTCCAAAGTAAAGATCTCTTTACTCCCATTTTTCCTCACGGTTTGTTAGGTTTCAATGACTAAAGCATATGCACATACCAAACCACTAAGATACATCTTTAGCTTTAATCACATTCTTTTTTATCAATAATGTTTTGATCATTTCCAATTTTAGCAAAAGCTATAGTGATGTTACAACTATTTCAACTATCTTTACAATATTTATTGAATTCATGCGAGCAATATATGCATTTGATTGGGGACTTCAGTAAGTTCAAATTTTCTCTCACACCCATAAATCAAGTACATCACTTTTTAATCTTTTCAATTTAAACCTAAAGCCTCTACAATAGAAATAACCCTACTCTTCTTTTGCCACTTGCACTATTCCCAAGAGTAACTTTAGTTCCAATTAGCTAGGCATGAGTTATACATGCATATGTCTTCATAGTTCATATATTTCAATAAGAACATTATTATTTTGAAGAAATTCAATAAGAACATTATAATTTATTTTTAAAGAGCTAGCAAAAAATACATAATTCAACATAAATTTGGTGACGAGATAATTAGTATTTATATAATTAAAATATTAAAGAAAAGCTTGCATTTAGTCTTATATAATTTTCGTCGATAAATTTGGTGACGAGATAATTAAACATAAATTTAATTTTTATGCACTAATATTTTGACATTGATTTTATTTTTTCTAGTAATATACATCATTGATATTTAATAATTAATATAGCATTTTTTTTTAATGATGCAGGATATAGAAATACCTATGTATGGTGGCTTCTATAATCAATTCCCTCAAACACCTTTAATGATGGAAGATTTCTCACAAATAGAGACAAAATCAATAGTGAAGCCTGATATATCTCATGACTGCTTTTTGTATGACAAATACAGAGACTGTATGAATGGAACACTTGAAGAAATCATCTCTTTATGTTCCTCTCAAGATCATTCTGTGGCTTTTCCTATGCCATAG
Protein sequence

>MS.gene89479.t1

MAPMTLPPGFRFHPTDEELVAYYLERKITGRTIELDIIAEVDLYKCEPWDLPERSFLPSKDMEWYFYSPRDRKYPNGSRTNRATRGGYWKATGKDRAVNSQKKQVGMKKTLVYYKGRAPHGIRTNWVMHEYRLIESHPGASLSSLKDSYSLCRIFKKTIQIPTKNNEEEQVKDTKKEMMVLEEQVQGEDSSGGTEISREVMQTMDEKILNQDKHPKFPCDASSSEVTQGTCTPTDTCNNIPTEDFHAQFAYEEENSSAISYPMGISYPSNLFQDIEIPMYGGFYNQFPQTPLMMEDFSQIETKSIVKPDISHDCFLYDKYRDCMNGTLEEIISLCSSQDHSVAFPMP