Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89591.t1 | QDC33492.1 | 100 | 145 | 0 | 0 | 1 | 145 | 1 | 145 | 5.90E-83 | 316.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89591.t1 | Q9S851 | 61.4 | 132 | 51 | 0 | 10 | 141 | 22 | 153 | 1.3e-46 | 187.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89591.t1 | A0A072VLL3 | 100.0 | 145 | 0 | 0 | 1 | 145 | 1 | 145 | 4.3e-83 | 316.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene89591.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89591.t1 | MTR_1g069805 | 100.000 | 145 | 0 | 0 | 1 | 145 | 1 | 145 | 2.35e-108 | 309 |
MS.gene89591.t1 | MTR_7g097090 | 93.103 | 145 | 10 | 0 | 1 | 145 | 1 | 145 | 1.06e-100 | 290 |
MS.gene89591.t1 | MTR_2g064470 | 62.857 | 140 | 48 | 2 | 6 | 145 | 7 | 142 | 2.34e-59 | 186 |
MS.gene89591.t1 | MTR_2g078700 | 61.832 | 131 | 50 | 0 | 8 | 138 | 21 | 151 | 1.34e-57 | 183 |
MS.gene89591.t1 | MTR_1g008740 | 56.115 | 139 | 60 | 1 | 2 | 139 | 5 | 143 | 6.98e-56 | 178 |
MS.gene89591.t1 | MTR_1g008740 | 56.115 | 139 | 60 | 1 | 2 | 139 | 19 | 157 | 7.18e-56 | 179 |
MS.gene89591.t1 | MTR_3g109340 | 58.015 | 131 | 55 | 0 | 9 | 139 | 21 | 151 | 9.31e-55 | 176 |
MS.gene89591.t1 | MTR_3g109340 | 58.015 | 131 | 55 | 0 | 9 | 139 | 21 | 151 | 9.48e-55 | 176 |
MS.gene89591.t1 | MTR_3g116070 | 56.618 | 136 | 58 | 1 | 10 | 144 | 23 | 158 | 5.60e-54 | 173 |
MS.gene89591.t1 | MTR_4g108760 | 55.556 | 144 | 59 | 2 | 5 | 145 | 12 | 153 | 3.37e-53 | 172 |
MS.gene89591.t1 | MTR_3g070030 | 57.364 | 129 | 53 | 1 | 10 | 138 | 19 | 145 | 1.02e-52 | 170 |
MS.gene89591.t1 | MTR_6g032770 | 58.140 | 129 | 54 | 0 | 10 | 138 | 18 | 146 | 1.59e-52 | 170 |
MS.gene89591.t1 | MTR_6g012670 | 56.115 | 139 | 55 | 2 | 4 | 138 | 10 | 146 | 5.51e-52 | 167 |
MS.gene89591.t1 | MTR_3g435150 | 58.140 | 129 | 52 | 1 | 10 | 138 | 16 | 142 | 9.24e-52 | 166 |
MS.gene89591.t1 | MTR_6g084430 | 57.143 | 133 | 55 | 1 | 9 | 141 | 4 | 134 | 3.39e-51 | 166 |
MS.gene89591.t1 | MTR_7g085260 | 55.882 | 136 | 58 | 1 | 5 | 138 | 12 | 147 | 5.99e-51 | 166 |
MS.gene89591.t1 | MTR_5g021710 | 54.286 | 140 | 59 | 2 | 8 | 144 | 6 | 143 | 1.23e-50 | 165 |
MS.gene89591.t1 | MTR_4g036030 | 54.074 | 135 | 57 | 2 | 8 | 139 | 5 | 137 | 2.14e-50 | 164 |
MS.gene89591.t1 | MTR_6g477900 | 56.391 | 133 | 54 | 2 | 8 | 138 | 4 | 134 | 4.08e-50 | 160 |
MS.gene89591.t1 | MTR_7g011130 | 55.556 | 126 | 54 | 1 | 13 | 138 | 22 | 145 | 4.56e-50 | 163 |
MS.gene89591.t1 | MTR_5g012080 | 54.815 | 135 | 57 | 2 | 8 | 139 | 5 | 138 | 5.86e-50 | 163 |
MS.gene89591.t1 | MTR_2g064090 | 57.778 | 135 | 53 | 2 | 9 | 141 | 5 | 137 | 1.25e-49 | 162 |
MS.gene89591.t1 | MTR_8g076110 | 53.521 | 142 | 60 | 3 | 8 | 145 | 4 | 143 | 5.03e-49 | 159 |
MS.gene89591.t1 | MTR_4g101680 | 54.074 | 135 | 57 | 2 | 8 | 139 | 5 | 137 | 5.22e-49 | 161 |
MS.gene89591.t1 | MTR_3g064580 | 59.848 | 132 | 49 | 2 | 9 | 138 | 5 | 134 | 6.13e-49 | 166 |
MS.gene89591.t1 | MTR_4g035590 | 52.083 | 144 | 64 | 2 | 3 | 143 | 1 | 142 | 1.94e-48 | 159 |
MS.gene89591.t1 | MTR_5g076850 | 59.091 | 132 | 50 | 2 | 9 | 138 | 5 | 134 | 3.62e-48 | 164 |
MS.gene89591.t1 | MTR_4g089135 | 54.545 | 132 | 60 | 0 | 10 | 141 | 15 | 146 | 4.91e-48 | 158 |
MS.gene89591.t1 | MTR_1g096430 | 51.724 | 145 | 64 | 3 | 5 | 145 | 2 | 144 | 2.41e-47 | 156 |
MS.gene89591.t1 | MTR_2g080010 | 55.814 | 129 | 57 | 0 | 9 | 137 | 14 | 142 | 3.59e-47 | 156 |
MS.gene89591.t1 | MTR_7g011120 | 53.968 | 126 | 56 | 1 | 13 | 138 | 11 | 134 | 1.28e-46 | 153 |
MS.gene89591.t1 | MTR_7g085220 | 49.306 | 144 | 66 | 1 | 9 | 145 | 7 | 150 | 1.58e-46 | 154 |
MS.gene89591.t1 | MTR_5g041940 | 51.562 | 128 | 60 | 1 | 10 | 137 | 3 | 128 | 1.97e-46 | 151 |
MS.gene89591.t1 | MTR_3g088110 | 56.923 | 130 | 51 | 2 | 9 | 137 | 6 | 131 | 2.05e-46 | 152 |
MS.gene89591.t1 | MTR_2g062730 | 52.632 | 133 | 59 | 2 | 9 | 138 | 9 | 140 | 5.58e-46 | 152 |
MS.gene89591.t1 | MTR_4g081870 | 49.242 | 132 | 65 | 1 | 6 | 137 | 5 | 134 | 9.65e-46 | 150 |
MS.gene89591.t1 | MTR_8g094580 | 54.688 | 128 | 55 | 1 | 10 | 137 | 7 | 131 | 1.40e-45 | 150 |
MS.gene89591.t1 | MTR_7g005280 | 51.852 | 135 | 62 | 1 | 10 | 144 | 15 | 146 | 2.16e-45 | 149 |
MS.gene89591.t1 | MTR_2g093810 | 51.163 | 129 | 63 | 0 | 9 | 137 | 13 | 141 | 3.96e-45 | 150 |
MS.gene89591.t1 | MTR_3g096920 | 55.039 | 129 | 53 | 2 | 10 | 137 | 7 | 131 | 4.86e-45 | 149 |
MS.gene89591.t1 | MTR_2157s0010 | 52.713 | 129 | 60 | 1 | 10 | 137 | 8 | 136 | 4.88e-45 | 148 |
MS.gene89591.t1 | MTR_7g100990 | 52.344 | 128 | 61 | 0 | 10 | 137 | 11 | 138 | 1.30e-44 | 149 |
MS.gene89591.t1 | MTR_3g096920 | 55.039 | 129 | 53 | 2 | 10 | 137 | 7 | 131 | 1.39e-44 | 149 |
MS.gene89591.t1 | MTR_8g024480 | 50.000 | 134 | 62 | 2 | 8 | 138 | 13 | 144 | 1.52e-44 | 151 |
MS.gene89591.t1 | MTR_2g079990 | 52.448 | 143 | 58 | 3 | 1 | 137 | 3 | 141 | 3.97e-43 | 145 |
MS.gene89591.t1 | MTR_5g014300 | 54.348 | 138 | 56 | 3 | 7 | 137 | 3 | 140 | 5.15e-43 | 145 |
MS.gene89591.t1 | MTR_2g079990 | 52.448 | 143 | 58 | 3 | 1 | 137 | 3 | 141 | 8.21e-43 | 145 |
MS.gene89591.t1 | MTR_8g059170 | 52.713 | 129 | 59 | 1 | 9 | 137 | 13 | 139 | 1.11e-41 | 141 |
MS.gene89591.t1 | MTR_3g070040 | 50.400 | 125 | 57 | 2 | 14 | 138 | 12 | 131 | 6.41e-41 | 139 |
MS.gene89591.t1 | MTR_8g467490 | 45.588 | 136 | 74 | 0 | 2 | 137 | 6 | 141 | 1.28e-40 | 140 |
MS.gene89591.t1 | MTR_4g098630 | 51.493 | 134 | 62 | 2 | 7 | 137 | 3 | 136 | 2.50e-40 | 137 |
MS.gene89591.t1 | MTR_0036s0150 | 51.938 | 129 | 57 | 3 | 12 | 137 | 7 | 133 | 1.40e-39 | 139 |
MS.gene89591.t1 | MTR_6g011860 | 46.043 | 139 | 71 | 2 | 10 | 145 | 15 | 152 | 2.94e-39 | 136 |
MS.gene89591.t1 | MTR_1g090720 | 49.618 | 131 | 58 | 3 | 9 | 135 | 41 | 167 | 5.65e-39 | 137 |
MS.gene89591.t1 | MTR_1g090723 | 51.163 | 129 | 58 | 3 | 12 | 137 | 10 | 136 | 5.79e-39 | 139 |
MS.gene89591.t1 | MTR_1g090723 | 51.163 | 129 | 58 | 3 | 12 | 137 | 10 | 136 | 6.06e-39 | 139 |
MS.gene89591.t1 | MTR_5g040420 | 46.825 | 126 | 67 | 0 | 12 | 137 | 16 | 141 | 6.83e-39 | 135 |
MS.gene89591.t1 | MTR_3g093050 | 50.769 | 130 | 60 | 2 | 9 | 136 | 21 | 148 | 2.17e-38 | 137 |
MS.gene89591.t1 | MTR_5g069030 | 52.713 | 129 | 57 | 2 | 10 | 136 | 25 | 151 | 2.42e-38 | 137 |
MS.gene89591.t1 | MTR_3g093040 | 50.769 | 130 | 60 | 2 | 9 | 136 | 107 | 234 | 2.51e-38 | 132 |
MS.gene89591.t1 | MTR_3g093050 | 50.769 | 130 | 60 | 2 | 9 | 136 | 21 | 148 | 3.86e-38 | 136 |
MS.gene89591.t1 | MTR_1g097300 | 48.837 | 129 | 62 | 2 | 12 | 138 | 21 | 147 | 1.41e-37 | 134 |
MS.gene89591.t1 | MTR_4g134460 | 50.000 | 126 | 62 | 1 | 12 | 137 | 56 | 180 | 2.73e-37 | 132 |
MS.gene89591.t1 | MTR_1g090723 | 51.163 | 129 | 58 | 3 | 12 | 137 | 10 | 136 | 2.80e-37 | 134 |
MS.gene89591.t1 | MTR_5g090970 | 45.926 | 135 | 67 | 2 | 12 | 145 | 20 | 149 | 3.44e-37 | 129 |
MS.gene89591.t1 | MTR_3g096140 | 46.617 | 133 | 67 | 2 | 12 | 142 | 9 | 139 | 4.05e-37 | 128 |
MS.gene89591.t1 | MTR_3g096140 | 46.617 | 133 | 67 | 2 | 12 | 142 | 9 | 139 | 2.12e-36 | 128 |
MS.gene89591.t1 | MTR_8g023840 | 48.148 | 135 | 66 | 3 | 10 | 141 | 11 | 144 | 6.01e-36 | 127 |
MS.gene89591.t1 | MTR_8g063550 | 44.203 | 138 | 73 | 2 | 10 | 145 | 6 | 141 | 1.20e-35 | 127 |
MS.gene89591.t1 | MTR_8g063550 | 45.802 | 131 | 67 | 2 | 10 | 138 | 6 | 134 | 1.57e-35 | 125 |
MS.gene89591.t1 | MTR_8g099750 | 42.222 | 135 | 76 | 1 | 3 | 137 | 7 | 139 | 2.37e-35 | 122 |
MS.gene89591.t1 | MTR_5g090970 | 45.926 | 135 | 66 | 3 | 12 | 145 | 20 | 148 | 2.67e-35 | 124 |
MS.gene89591.t1 | MTR_8g063550 | 45.802 | 131 | 67 | 2 | 10 | 138 | 6 | 134 | 6.04e-35 | 125 |
MS.gene89591.t1 | MTR_2g086880 | 46.923 | 130 | 66 | 2 | 7 | 135 | 15 | 142 | 6.94e-35 | 126 |
MS.gene89591.t1 | MTR_2g068920 | 47.287 | 129 | 65 | 2 | 12 | 137 | 23 | 151 | 9.57e-35 | 122 |
MS.gene89591.t1 | MTR_2g086880 | 46.923 | 130 | 66 | 2 | 7 | 135 | 15 | 142 | 9.86e-35 | 127 |
MS.gene89591.t1 | MTR_2g068880 | 46.512 | 129 | 66 | 2 | 12 | 137 | 24 | 152 | 3.33e-34 | 121 |
MS.gene89591.t1 | MTR_4g075980 | 44.961 | 129 | 66 | 2 | 12 | 137 | 17 | 143 | 8.98e-34 | 120 |
MS.gene89591.t1 | MTR_3g098810 | 46.212 | 132 | 67 | 2 | 8 | 137 | 12 | 141 | 1.04e-33 | 116 |
MS.gene89591.t1 | MTR_8g023860 | 44.961 | 129 | 67 | 3 | 10 | 135 | 12 | 139 | 2.62e-33 | 121 |
MS.gene89591.t1 | MTR_3g098810 | 46.212 | 132 | 67 | 2 | 8 | 137 | 12 | 141 | 6.57e-33 | 116 |
MS.gene89591.t1 | MTR_8g093580 | 42.029 | 138 | 76 | 2 | 10 | 145 | 6 | 141 | 9.65e-33 | 120 |
MS.gene89591.t1 | MTR_2g086690 | 45.113 | 133 | 64 | 4 | 11 | 136 | 5 | 135 | 1.90e-31 | 112 |
MS.gene89591.t1 | MTR_8g023900 | 43.571 | 140 | 70 | 4 | 4 | 135 | 182 | 320 | 3.79e-31 | 116 |
MS.gene89591.t1 | MTR_8g023900 | 41.353 | 133 | 74 | 3 | 6 | 135 | 8 | 139 | 2.79e-27 | 105 |
MS.gene89591.t1 | MTR_4g052620 | 42.424 | 132 | 70 | 3 | 10 | 136 | 5 | 135 | 8.38e-31 | 111 |
MS.gene89591.t1 | MTR_4g094302 | 41.406 | 128 | 67 | 1 | 10 | 137 | 11 | 130 | 1.39e-30 | 108 |
MS.gene89591.t1 | MTR_4g094302 | 41.406 | 128 | 67 | 1 | 10 | 137 | 11 | 130 | 4.79e-30 | 107 |
MS.gene89591.t1 | MTR_8g023930 | 43.411 | 129 | 69 | 3 | 10 | 135 | 24 | 151 | 1.10e-28 | 109 |
MS.gene89591.t1 | MTR_3g096140 | 43.333 | 120 | 64 | 2 | 25 | 142 | 1 | 118 | 2.62e-28 | 106 |
MS.gene89591.t1 | MTR_7g105170 | 38.806 | 134 | 75 | 4 | 9 | 136 | 3 | 135 | 7.43e-28 | 103 |
MS.gene89591.t1 | MTR_8g023880 | 38.514 | 148 | 71 | 5 | 5 | 135 | 2 | 146 | 2.62e-27 | 102 |
MS.gene89591.t1 | MTR_7g070140 | 53.750 | 80 | 37 | 0 | 65 | 144 | 19 | 98 | 8.49e-27 | 97.8 |
MS.gene89591.t1 | MTR_8g094580 | 60.274 | 73 | 26 | 1 | 65 | 137 | 8 | 77 | 3.49e-25 | 96.3 |
MS.gene89591.t1 | MTR_7g083330 | 33.333 | 135 | 84 | 4 | 7 | 139 | 15 | 145 | 2.05e-18 | 77.8 |
MS.gene89591.t1 | MTR_8g093790 | 38.462 | 130 | 62 | 5 | 10 | 139 | 10 | 121 | 3.79e-18 | 77.0 |
MS.gene89591.t1 | MTR_7g083370 | 32.867 | 143 | 90 | 4 | 1 | 141 | 1 | 139 | 9.05e-18 | 74.7 |
MS.gene89591.t1 | MTR_7g083360 | 29.932 | 147 | 97 | 4 | 1 | 145 | 1 | 143 | 1.31e-17 | 74.7 |
MS.gene89591.t1 | MTR_3g096400 | 31.783 | 129 | 80 | 3 | 10 | 137 | 7 | 128 | 5.62e-16 | 71.6 |
MS.gene89591.t1 | MTR_7g070150 | 62.500 | 40 | 15 | 0 | 105 | 144 | 5 | 44 | 3.56e-12 | 58.9 |
MS.gene89591.t1 | MTR_2g014680 | 32.639 | 144 | 78 | 6 | 10 | 137 | 53 | 193 | 1.02e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89591.t1 | AT4G28530 | 71.429 | 161 | 30 | 2 | 1 | 145 | 1 | 161 | 4.89e-80 | 240 |
MS.gene89591.t1 | AT2G24430 | 59.542 | 131 | 53 | 0 | 9 | 139 | 15 | 145 | 2.34e-57 | 181 |
MS.gene89591.t1 | AT2G24430 | 59.542 | 131 | 53 | 0 | 9 | 139 | 15 | 145 | 2.34e-57 | 181 |
MS.gene89591.t1 | AT1G76420 | 60.902 | 133 | 52 | 0 | 9 | 141 | 21 | 153 | 7.29e-57 | 180 |
MS.gene89591.t1 | AT5G53950 | 62.016 | 129 | 49 | 0 | 10 | 138 | 17 | 145 | 1.71e-56 | 181 |
MS.gene89591.t1 | AT4G28530 | 62.044 | 137 | 36 | 2 | 1 | 121 | 1 | 137 | 1.66e-53 | 171 |
MS.gene89591.t1 | AT1G56010 | 57.447 | 141 | 57 | 2 | 6 | 145 | 15 | 153 | 2.21e-53 | 171 |
MS.gene89591.t1 | AT5G61430 | 57.554 | 139 | 54 | 2 | 10 | 145 | 16 | 152 | 2.30e-53 | 171 |
MS.gene89591.t1 | AT3G15170 | 56.589 | 129 | 56 | 0 | 10 | 138 | 20 | 148 | 2.88e-53 | 171 |
MS.gene89591.t1 | AT5G07680 | 59.690 | 129 | 50 | 1 | 10 | 138 | 3 | 129 | 5.76e-53 | 170 |
MS.gene89591.t1 | AT5G07680 | 58.209 | 134 | 54 | 1 | 5 | 138 | 12 | 143 | 6.51e-53 | 170 |
MS.gene89591.t1 | AT3G29035 | 60.465 | 129 | 49 | 1 | 10 | 138 | 24 | 150 | 1.48e-52 | 169 |
MS.gene89591.t1 | AT3G12977 | 57.143 | 133 | 55 | 1 | 6 | 138 | 14 | 144 | 3.96e-52 | 167 |
MS.gene89591.t1 | AT5G39610 | 59.690 | 129 | 50 | 1 | 10 | 138 | 20 | 146 | 8.84e-52 | 166 |
MS.gene89591.t1 | AT3G18400 | 55.725 | 131 | 56 | 1 | 9 | 139 | 4 | 132 | 8.92e-52 | 167 |
MS.gene89591.t1 | AT4G36160 | 53.846 | 143 | 61 | 2 | 5 | 144 | 9 | 149 | 3.62e-51 | 167 |
MS.gene89591.t1 | AT4G36160 | 53.846 | 143 | 61 | 2 | 5 | 144 | 5 | 145 | 4.19e-51 | 167 |
MS.gene89591.t1 | AT4G36160 | 53.846 | 143 | 61 | 2 | 5 | 144 | 5 | 145 | 4.19e-51 | 167 |
MS.gene89591.t1 | AT2G18060 | 53.901 | 141 | 60 | 2 | 7 | 144 | 6 | 144 | 1.37e-50 | 165 |
MS.gene89591.t1 | AT2G18060 | 53.901 | 141 | 60 | 2 | 7 | 144 | 6 | 144 | 1.37e-50 | 165 |
MS.gene89591.t1 | AT5G18270 | 58.779 | 131 | 53 | 1 | 8 | 138 | 19 | 148 | 2.20e-50 | 164 |
MS.gene89591.t1 | AT5G18270 | 58.779 | 131 | 53 | 1 | 8 | 138 | 19 | 148 | 2.29e-50 | 164 |
MS.gene89591.t1 | AT1G12260 | 54.887 | 133 | 55 | 2 | 10 | 139 | 7 | 137 | 2.87e-50 | 164 |
MS.gene89591.t1 | AT5G66300 | 53.061 | 147 | 62 | 3 | 4 | 145 | 6 | 150 | 4.61e-50 | 162 |
MS.gene89591.t1 | AT1G12260 | 54.887 | 133 | 55 | 2 | 10 | 139 | 7 | 137 | 6.12e-50 | 164 |
MS.gene89591.t1 | AT3G04070 | 52.857 | 140 | 63 | 1 | 1 | 137 | 1 | 140 | 1.19e-49 | 162 |
MS.gene89591.t1 | AT1G62700 | 54.074 | 135 | 57 | 2 | 8 | 139 | 5 | 137 | 1.23e-49 | 163 |
MS.gene89591.t1 | AT1G62700 | 54.074 | 135 | 57 | 2 | 8 | 139 | 5 | 137 | 1.23e-49 | 163 |
MS.gene89591.t1 | AT3G04070 | 52.857 | 140 | 63 | 1 | 1 | 137 | 1 | 140 | 2.00e-49 | 162 |
MS.gene89591.t1 | AT5G17260 | 54.348 | 138 | 59 | 2 | 9 | 144 | 5 | 140 | 3.71e-49 | 164 |
MS.gene89591.t1 | AT3G03200 | 55.797 | 138 | 57 | 2 | 9 | 144 | 5 | 140 | 5.20e-49 | 164 |
MS.gene89591.t1 | AT3G17730 | 56.489 | 131 | 53 | 2 | 10 | 138 | 6 | 134 | 7.30e-49 | 157 |
MS.gene89591.t1 | AT3G04060 | 57.364 | 129 | 54 | 1 | 10 | 138 | 20 | 147 | 1.41e-48 | 159 |
MS.gene89591.t1 | AT4G10350 | 53.425 | 146 | 62 | 3 | 1 | 143 | 1 | 143 | 4.54e-48 | 158 |
MS.gene89591.t1 | AT1G33280 | 53.237 | 139 | 60 | 2 | 3 | 138 | 1 | 137 | 4.81e-48 | 157 |
MS.gene89591.t1 | AT1G65910 | 57.895 | 133 | 50 | 3 | 9 | 138 | 5 | 134 | 7.94e-48 | 163 |
MS.gene89591.t1 | AT1G71930 | 52.113 | 142 | 63 | 2 | 6 | 144 | 5 | 144 | 1.03e-47 | 157 |
MS.gene89591.t1 | AT1G71930 | 52.113 | 142 | 63 | 2 | 6 | 144 | 5 | 144 | 1.03e-47 | 157 |
MS.gene89591.t1 | AT1G61110 | 55.000 | 140 | 59 | 2 | 1 | 137 | 4 | 142 | 2.35e-47 | 155 |
MS.gene89591.t1 | AT5G62380 | 52.143 | 140 | 62 | 2 | 8 | 144 | 5 | 142 | 1.00e-46 | 155 |
MS.gene89591.t1 | AT5G62380 | 52.143 | 140 | 62 | 2 | 8 | 144 | 5 | 142 | 1.00e-46 | 155 |
MS.gene89591.t1 | AT3G61910 | 52.239 | 134 | 59 | 2 | 8 | 138 | 9 | 140 | 1.82e-46 | 154 |
MS.gene89591.t1 | AT1G54330 | 58.015 | 131 | 51 | 2 | 9 | 137 | 5 | 133 | 1.88e-46 | 152 |
MS.gene89591.t1 | AT1G01720 | 54.688 | 128 | 55 | 1 | 10 | 137 | 7 | 131 | 1.83e-45 | 150 |
MS.gene89591.t1 | AT2G46770 | 47.518 | 141 | 69 | 2 | 8 | 145 | 14 | 152 | 4.94e-45 | 150 |
MS.gene89591.t1 | AT5G08790 | 54.264 | 129 | 56 | 1 | 9 | 137 | 6 | 131 | 6.32e-45 | 148 |
MS.gene89591.t1 | AT1G69490 | 50.769 | 130 | 62 | 1 | 8 | 137 | 7 | 134 | 1.52e-44 | 147 |
MS.gene89591.t1 | AT1G77450 | 53.383 | 133 | 57 | 2 | 7 | 137 | 5 | 134 | 3.60e-44 | 145 |
MS.gene89591.t1 | AT1G32770 | 47.826 | 138 | 67 | 2 | 8 | 142 | 14 | 149 | 3.80e-44 | 148 |
MS.gene89591.t1 | AT1G79580 | 51.880 | 133 | 60 | 2 | 9 | 138 | 16 | 147 | 4.09e-44 | 148 |
MS.gene89591.t1 | AT1G79580 | 51.880 | 133 | 60 | 2 | 9 | 138 | 16 | 147 | 4.09e-44 | 148 |
MS.gene89591.t1 | AT1G79580 | 51.880 | 133 | 60 | 2 | 9 | 138 | 16 | 147 | 4.09e-44 | 148 |
MS.gene89591.t1 | AT1G79580 | 51.880 | 133 | 60 | 2 | 9 | 138 | 16 | 147 | 4.09e-44 | 148 |
MS.gene89591.t1 | AT1G79580 | 51.880 | 133 | 60 | 2 | 9 | 138 | 16 | 147 | 4.09e-44 | 148 |
MS.gene89591.t1 | AT5G63790 | 54.264 | 129 | 56 | 1 | 9 | 137 | 49 | 174 | 4.55e-44 | 147 |
MS.gene89591.t1 | AT5G63790 | 54.264 | 129 | 56 | 1 | 9 | 137 | 59 | 184 | 4.69e-44 | 147 |
MS.gene89591.t1 | AT5G46590 | 51.128 | 133 | 62 | 2 | 7 | 137 | 3 | 134 | 7.76e-44 | 145 |
MS.gene89591.t1 | AT4G17980 | 52.632 | 133 | 61 | 1 | 7 | 137 | 3 | 135 | 8.82e-44 | 145 |
MS.gene89591.t1 | AT5G46590 | 51.128 | 133 | 62 | 2 | 7 | 137 | 3 | 134 | 9.56e-44 | 145 |
MS.gene89591.t1 | AT3G15500 | 51.389 | 144 | 64 | 2 | 1 | 140 | 1 | 142 | 1.39e-43 | 145 |
MS.gene89591.t1 | AT3G10490 | 50.000 | 138 | 65 | 2 | 2 | 137 | 19 | 154 | 2.29e-43 | 143 |
MS.gene89591.t1 | AT4G17980 | 52.632 | 133 | 61 | 1 | 7 | 137 | 3 | 135 | 2.52e-43 | 144 |
MS.gene89591.t1 | AT1G52890 | 53.788 | 132 | 59 | 1 | 9 | 140 | 13 | 142 | 2.57e-43 | 145 |
MS.gene89591.t1 | AT3G10500 | 51.908 | 131 | 59 | 2 | 9 | 137 | 8 | 136 | 6.06e-43 | 149 |
MS.gene89591.t1 | AT3G15510 | 52.419 | 124 | 59 | 0 | 14 | 137 | 21 | 144 | 6.22e-43 | 145 |
MS.gene89591.t1 | AT1G33060 | 56.154 | 130 | 53 | 2 | 9 | 136 | 23 | 150 | 8.54e-43 | 149 |
MS.gene89591.t1 | AT5G04410 | 51.908 | 131 | 59 | 2 | 9 | 137 | 8 | 136 | 1.02e-42 | 148 |
MS.gene89591.t1 | AT1G33060 | 56.154 | 130 | 53 | 2 | 9 | 136 | 23 | 150 | 1.10e-42 | 149 |
MS.gene89591.t1 | AT4G27410 | 50.355 | 141 | 64 | 2 | 1 | 137 | 1 | 139 | 1.36e-42 | 142 |
MS.gene89591.t1 | AT4G35580 | 56.923 | 130 | 52 | 2 | 9 | 136 | 8 | 135 | 2.25e-42 | 147 |
MS.gene89591.t1 | AT3G10480 | 51.880 | 133 | 60 | 2 | 7 | 137 | 24 | 154 | 2.30e-42 | 145 |
MS.gene89591.t1 | AT3G10480 | 51.880 | 133 | 60 | 2 | 7 | 137 | 24 | 154 | 2.77e-42 | 145 |
MS.gene89591.t1 | AT4G35580 | 56.923 | 130 | 52 | 2 | 9 | 136 | 8 | 135 | 3.60e-42 | 146 |
MS.gene89591.t1 | AT3G10490 | 50.000 | 138 | 65 | 2 | 2 | 137 | 19 | 154 | 1.24e-41 | 144 |
MS.gene89591.t1 | AT1G32510 | 50.704 | 142 | 57 | 3 | 6 | 137 | 2 | 140 | 1.35e-41 | 140 |
MS.gene89591.t1 | AT4G35580 | 56.923 | 130 | 52 | 2 | 9 | 136 | 8 | 135 | 1.58e-41 | 145 |
MS.gene89591.t1 | AT5G24590 | 54.198 | 131 | 57 | 2 | 8 | 136 | 11 | 140 | 3.42e-41 | 142 |
MS.gene89591.t1 | AT5G39820 | 47.619 | 126 | 66 | 0 | 12 | 137 | 22 | 147 | 7.16e-41 | 139 |
MS.gene89591.t1 | AT5G13180 | 50.000 | 128 | 61 | 1 | 10 | 137 | 14 | 138 | 5.91e-40 | 135 |
MS.gene89591.t1 | AT3G49530 | 50.000 | 130 | 62 | 2 | 9 | 136 | 12 | 140 | 3.12e-39 | 137 |
MS.gene89591.t1 | AT2G33480 | 50.000 | 128 | 59 | 2 | 10 | 137 | 15 | 137 | 5.65e-39 | 132 |
MS.gene89591.t1 | AT2G33480 | 50.000 | 128 | 59 | 2 | 10 | 137 | 15 | 137 | 5.68e-39 | 132 |
MS.gene89591.t1 | AT2G43000 | 47.619 | 126 | 64 | 1 | 12 | 137 | 20 | 143 | 8.62e-39 | 132 |
MS.gene89591.t1 | AT1G26870 | 46.457 | 127 | 68 | 0 | 10 | 136 | 16 | 142 | 1.35e-38 | 135 |
MS.gene89591.t1 | AT4G27410 | 45.570 | 158 | 63 | 4 | 1 | 137 | 1 | 156 | 1.54e-38 | 132 |
MS.gene89591.t1 | AT3G49530 | 50.000 | 130 | 62 | 2 | 9 | 136 | 12 | 140 | 4.07e-38 | 134 |
MS.gene89591.t1 | AT2G02450 | 49.231 | 130 | 63 | 2 | 12 | 141 | 53 | 179 | 1.11e-37 | 132 |
MS.gene89591.t1 | AT3G10480 | 42.169 | 166 | 59 | 3 | 7 | 137 | 24 | 187 | 1.35e-37 | 134 |
MS.gene89591.t1 | AT2G02450 | 49.231 | 130 | 63 | 2 | 12 | 141 | 53 | 179 | 2.15e-37 | 132 |
MS.gene89591.t1 | AT1G52880 | 50.794 | 126 | 60 | 1 | 14 | 137 | 21 | 146 | 1.09e-36 | 128 |
MS.gene89591.t1 | AT1G34180 | 45.736 | 129 | 66 | 2 | 12 | 138 | 18 | 144 | 1.17e-36 | 130 |
MS.gene89591.t1 | AT1G34180 | 45.736 | 129 | 66 | 2 | 12 | 138 | 18 | 144 | 2.00e-36 | 131 |
MS.gene89591.t1 | AT1G34190 | 44.961 | 129 | 67 | 2 | 12 | 138 | 18 | 144 | 9.77e-36 | 129 |
MS.gene89591.t1 | AT2G27300 | 47.287 | 129 | 65 | 2 | 8 | 135 | 12 | 138 | 1.11e-35 | 125 |
MS.gene89591.t1 | AT5G09330 | 46.565 | 131 | 66 | 2 | 10 | 138 | 6 | 134 | 4.53e-35 | 127 |
MS.gene89591.t1 | AT5G09330 | 46.565 | 131 | 66 | 2 | 10 | 138 | 6 | 134 | 4.53e-35 | 127 |
MS.gene89591.t1 | AT5G09330 | 46.565 | 131 | 66 | 2 | 10 | 138 | 6 | 134 | 4.53e-35 | 127 |
MS.gene89591.t1 | AT5G09330 | 46.565 | 131 | 66 | 2 | 10 | 138 | 6 | 134 | 4.53e-35 | 127 |
MS.gene89591.t1 | AT5G09330 | 46.565 | 131 | 66 | 2 | 10 | 138 | 6 | 134 | 4.53e-35 | 127 |
MS.gene89591.t1 | AT1G34180 | 41.844 | 141 | 66 | 2 | 12 | 138 | 18 | 156 | 8.18e-35 | 125 |
MS.gene89591.t1 | AT1G56010 | 63.636 | 88 | 30 | 1 | 58 | 145 | 1 | 86 | 8.22e-35 | 122 |
MS.gene89591.t1 | AT1G34180 | 41.844 | 141 | 66 | 2 | 12 | 138 | 18 | 156 | 1.45e-34 | 126 |
MS.gene89591.t1 | AT2G17040 | 44.094 | 127 | 70 | 1 | 12 | 137 | 8 | 134 | 4.04e-34 | 120 |
MS.gene89591.t1 | AT1G32870 | 48.921 | 139 | 65 | 3 | 1 | 137 | 1 | 135 | 4.98e-34 | 124 |
MS.gene89591.t1 | AT5G04395 | 42.384 | 151 | 73 | 2 | 1 | 137 | 19 | 169 | 5.10e-34 | 117 |
MS.gene89591.t1 | AT1G32870 | 48.921 | 139 | 65 | 3 | 1 | 137 | 1 | 135 | 6.02e-34 | 124 |
MS.gene89591.t1 | AT3G12977 | 63.095 | 84 | 29 | 1 | 55 | 138 | 10 | 91 | 4.79e-33 | 116 |
MS.gene89591.t1 | AT1G32870 | 48.921 | 139 | 65 | 3 | 1 | 137 | 37 | 171 | 6.80e-33 | 121 |
MS.gene89591.t1 | AT3G12910 | 48.148 | 135 | 58 | 4 | 12 | 139 | 23 | 152 | 1.05e-32 | 117 |
MS.gene89591.t1 | AT5G61430 | 60.440 | 91 | 31 | 2 | 58 | 145 | 1 | 89 | 5.07e-32 | 115 |
MS.gene89591.t1 | AT3G44290 | 42.520 | 127 | 70 | 2 | 12 | 137 | 16 | 140 | 2.32e-31 | 112 |
MS.gene89591.t1 | AT5G64060 | 41.667 | 132 | 73 | 2 | 9 | 138 | 5 | 134 | 3.05e-31 | 114 |
MS.gene89591.t1 | AT5G22290 | 41.304 | 138 | 73 | 3 | 4 | 135 | 10 | 145 | 5.79e-31 | 113 |
MS.gene89591.t1 | AT3G44290 | 43.200 | 125 | 68 | 2 | 12 | 135 | 16 | 138 | 1.57e-30 | 112 |
MS.gene89591.t1 | AT4G10350 | 57.609 | 92 | 34 | 2 | 55 | 143 | 7 | 96 | 8.85e-30 | 109 |
MS.gene89591.t1 | AT3G44350 | 41.912 | 136 | 73 | 3 | 6 | 136 | 1 | 135 | 3.20e-28 | 102 |
MS.gene89591.t1 | AT3G44350 | 41.912 | 136 | 73 | 3 | 6 | 136 | 1 | 135 | 1.65e-27 | 102 |
MS.gene89591.t1 | AT4G01550 | 40.310 | 129 | 73 | 3 | 13 | 137 | 7 | 135 | 6.95e-27 | 104 |
MS.gene89591.t1 | AT5G64530 | 37.209 | 129 | 69 | 2 | 9 | 137 | 2 | 118 | 1.61e-26 | 97.8 |
MS.gene89591.t1 | AT5G22380 | 41.860 | 129 | 68 | 3 | 13 | 135 | 8 | 135 | 2.36e-26 | 99.4 |
MS.gene89591.t1 | AT5G64530 | 37.209 | 129 | 69 | 2 | 9 | 137 | 2 | 118 | 4.68e-26 | 97.4 |
MS.gene89591.t1 | AT1G02230 | 41.538 | 130 | 68 | 5 | 11 | 135 | 4 | 130 | 7.51e-25 | 97.8 |
MS.gene89591.t1 | AT4G01520 | 36.496 | 137 | 81 | 5 | 11 | 141 | 5 | 141 | 1.68e-23 | 93.2 |
MS.gene89591.t1 | AT3G04420 | 35.075 | 134 | 81 | 3 | 11 | 140 | 4 | 135 | 8.84e-23 | 91.3 |
MS.gene89591.t1 | AT3G04420 | 35.075 | 134 | 81 | 3 | 11 | 140 | 4 | 135 | 1.33e-22 | 91.7 |
MS.gene89591.t1 | AT2G33480 | 55.405 | 74 | 31 | 1 | 64 | 137 | 9 | 80 | 1.75e-22 | 89.0 |
MS.gene89591.t1 | AT4G01540 | 36.296 | 135 | 80 | 5 | 13 | 141 | 7 | 141 | 2.95e-22 | 91.3 |
MS.gene89591.t1 | AT4G01540 | 36.296 | 135 | 80 | 5 | 13 | 141 | 7 | 141 | 3.44e-22 | 91.7 |
MS.gene89591.t1 | AT4G01540 | 36.296 | 135 | 80 | 5 | 13 | 141 | 7 | 141 | 3.90e-22 | 90.9 |
MS.gene89591.t1 | AT4G01540 | 36.296 | 135 | 80 | 5 | 13 | 141 | 7 | 141 | 4.38e-22 | 90.5 |
MS.gene89591.t1 | AT2G18060 | 57.895 | 57 | 22 | 1 | 88 | 144 | 2 | 56 | 3.76e-18 | 78.6 |
MS.gene89591.t1 | AT1G02220 | 32.558 | 129 | 78 | 4 | 11 | 135 | 4 | 127 | 4.02e-18 | 79.7 |
MS.gene89591.t1 | AT1G01010 | 38.806 | 134 | 68 | 6 | 13 | 135 | 6 | 136 | 4.04e-18 | 79.7 |
MS.gene89591.t1 | AT3G04430 | 36.957 | 138 | 73 | 5 | 16 | 141 | 6 | 141 | 4.57e-18 | 77.0 |
MS.gene89591.t1 | AT1G02250 | 34.615 | 130 | 77 | 4 | 11 | 135 | 4 | 130 | 1.51e-17 | 77.8 |
MS.gene89591.t1 | AT3G10490 | 60.000 | 55 | 20 | 1 | 83 | 137 | 2 | 54 | 5.34e-17 | 76.3 |
MS.gene89591.t1 | AT3G10490 | 60.000 | 55 | 20 | 1 | 83 | 137 | 2 | 54 | 5.34e-17 | 76.3 |
MS.gene89591.t1 | AT5G50820 | 37.226 | 137 | 62 | 6 | 10 | 137 | 17 | 138 | 1.17e-16 | 73.2 |
MS.gene89591.t1 | AT3G56530 | 28.358 | 134 | 91 | 3 | 9 | 139 | 51 | 182 | 2.85e-16 | 73.9 |
MS.gene89591.t1 | AT2G43000 | 49.275 | 69 | 33 | 1 | 71 | 139 | 1 | 67 | 6.20e-16 | 71.2 |
MS.gene89591.t1 | AT5G14000 | 31.579 | 133 | 85 | 3 | 7 | 137 | 12 | 140 | 7.47e-15 | 67.8 |
MS.gene89591.t1 | AT5G14000 | 31.579 | 133 | 85 | 3 | 7 | 137 | 12 | 140 | 4.89e-14 | 66.6 |
MS.gene89591.t1 | AT5G22290 | 57.447 | 47 | 18 | 1 | 89 | 135 | 2 | 46 | 5.79e-11 | 58.9 |
MS.gene89591.t1 | AT1G28470 | 32.877 | 146 | 77 | 7 | 9 | 137 | 76 | 217 | 9.47e-11 | 58.5 |
Find 40 sgRNAs with CRISPR-Local
Find 108 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCAGATGTTGTTGCCCTAT+TGG | 0.241618 | 1.1:-51849367 | None:intergenic |
ACCAATAGGGCAACAACATC+TGG | 0.310609 | 1.1:+51849366 | MS.gene89591:CDS |
TAAAACCTGTGGCATATTTA+CGG | 0.326045 | 1.1:-51849341 | None:intergenic |
TGCGAGCCTTGGCAACTTCC+TGG | 0.343644 | 1.1:+51847416 | MS.gene89591:CDS |
GTTGGATCATGCATGAGTTT+AGG | 0.344473 | 1.1:+51849508 | MS.gene89591:CDS |
GGAAAACTCTAGTGTTCTAT+AGG | 0.402144 | 1.1:+51849457 | MS.gene89591:CDS |
CGTACCTTAGGTGGCATATG+TGG | 0.408299 | 1.1:-51849540 | None:intergenic |
CCTACAACCTCATGTGTGAT+TGG | 0.419579 | 1.1:-51849429 | None:intergenic |
GCTCCAAATGGAATCAAAAC+AGG | 0.425014 | 1.1:+51849486 | MS.gene89591:CDS |
GGGCAACAACATCTGGGTAT+TGG | 0.439791 | 1.1:+51849373 | MS.gene89591:CDS |
CCAATCACACATGAGGTTGT+AGG | 0.470021 | 1.1:+51849429 | MS.gene89591:CDS |
TCTGGGTATTGGAAAGCAAC+AGG | 0.476335 | 1.1:+51849384 | MS.gene89591:CDS |
CTAGGATAAAATCGAAAGCC+AGG | 0.494510 | 1.1:-51847302 | None:intergenic |
CACAAATGAGGATGTTCTCA+AGG | 0.510472 | 1.1:+51847364 | MS.gene89591:CDS |
CGTGACCGTAAATATGCCAC+AGG | 0.515429 | 1.1:+51849336 | MS.gene89591:CDS |
GATCATGCATGAGTTTAGGT+TGG | 0.515996 | 1.1:+51849512 | MS.gene89591:CDS |
ACTTGCATACATGCGAGCCT+TGG | 0.522819 | 1.1:+51847405 | MS.gene89591:CDS |
TTATCCTAGTGATGAAGAGT+TGG | 0.524957 | 1.1:+51847316 | MS.gene89591:CDS |
CTAAACTCAACGCAACTGAA+TGG | 0.538893 | 1.1:+51849298 | MS.gene89591:CDS |
TATAGGAATAGAGCTCCAAA+TGG | 0.544085 | 1.1:+51849474 | MS.gene89591:CDS |
GGATGTTCTCAAGGGTACCT+TGG | 0.551085 | 1.1:+51847373 | MS.gene89591:CDS |
TGTTCTCAAGGGTACCTTGG+AGG | 0.553598 | 1.1:+51847376 | MS.gene89591:CDS |
CACATGAGGTTGTAGGAATG+AGG | 0.561923 | 1.1:+51849436 | MS.gene89591:CDS |
GTACCTTAGGTGGCATATGT+GGG | 0.562749 | 1.1:-51849539 | None:intergenic |
CAAATGGAATCAAAACAGGT+TGG | 0.568983 | 1.1:+51849490 | MS.gene89591:CDS |
ATCATGGGTCTTAGAGATGT+CGG | 0.583109 | 1.1:+51847266 | None:intergenic |
AGGACCAACTCTTCATCACT+AGG | 0.594537 | 1.1:-51847320 | None:intergenic |
GACCCCACATATGCCACCTA+AGG | 0.595376 | 1.1:+51849536 | MS.gene89591:CDS |
CCAATAGGGCAACAACATCT+GGG | 0.597019 | 1.1:+51849367 | MS.gene89591:CDS |
TATATACCAGGAAGTTGCCA+AGG | 0.602199 | 1.1:-51847422 | None:intergenic |
TAGGATAAAATCGAAAGCCA+GGG | 0.604860 | 1.1:-51847301 | None:intergenic |
ATGCAAGTCAATTTCCTCCA+AGG | 0.605909 | 1.1:-51847390 | None:intergenic |
CCTATTGGTTCTAAAACCTG+TGG | 0.612834 | 1.1:-51849352 | None:intergenic |
AGCAACAGGAAAGGATCGAA+CGG | 0.629108 | 1.1:+51849398 | MS.gene89591:CDS |
TACCTTAGGTGGCATATGTG+GGG | 0.640655 | 1.1:-51849538 | None:intergenic |
GTTTGATCCAATCACACATG+AGG | 0.642011 | 1.1:+51849422 | MS.gene89591:CDS |
ACAAATGAGGATGTTCTCAA+GGG | 0.646017 | 1.1:+51847365 | MS.gene89591:CDS |
GTATTGGAAAGCAACAGGAA+AGG | 0.658210 | 1.1:+51849389 | MS.gene89591:CDS |
AGGATAAAATCGAAAGCCAG+GGG | 0.675897 | 1.1:-51847300 | None:intergenic |
GGATAAAATCGAAAGCCAGG+GGG | 0.720221 | 1.1:-51847299 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATATAAAAAAATTATTTAT+TGG | - | chr1.1:51847910-51847929 | None:intergenic | 0.0% |
!!! | AATAATTTTTTTATATAATA+TGG | + | chr1.1:51847913-51847932 | MS.gene89591:intron | 0.0% |
!! | AATAAAATAAAAGAGAAAAT+TGG | + | chr1.1:51847782-51847801 | MS.gene89591:intron | 10.0% |
!! | AAAAAAATTATCGTTATTGA+TGG | + | chr1.1:51848610-51848629 | MS.gene89591:intron | 15.0% |
!! | AAAGAAGAAGAAATAATTAA+AGG | + | chr1.1:51847706-51847725 | MS.gene89591:intron | 15.0% |
!! | CAATAATGACAAAAATAATT+TGG | - | chr1.1:51849085-51849104 | None:intergenic | 15.0% |
!! | TCAACTCATAAATAAATATA+AGG | - | chr1.1:51847639-51847658 | None:intergenic | 15.0% |
!! | TGATAAATATAATATATACC+AGG | - | chr1.1:51847437-51847456 | None:intergenic | 15.0% |
!! | TTAACCAAAGAATTAATATA+TGG | - | chr1.1:51847530-51847549 | None:intergenic | 15.0% |
!! | TTAACCATATATTAATTCTT+TGG | + | chr1.1:51847523-51847542 | MS.gene89591:intron | 15.0% |
!!! | ATTTAAAGTGTATACAAAAT+AGG | + | chr1.1:51848515-51848534 | MS.gene89591:intron | 15.0% |
!!! | TGTTTTTTTTTTTTATTCAG+AGG | + | chr1.1:51849272-51849291 | MS.gene89591:intron | 15.0% |
!! | ACAAAAGCAATTATGTAAAA+CGG | - | chr1.1:51847954-51847973 | None:intergenic | 20.0% |
!! | ATAAAAGAGAAAATTGGTTA+TGG | + | chr1.1:51847788-51847807 | MS.gene89591:intron | 20.0% |
!! | ATAGAGATCATAATATTGTT+TGG | - | chr1.1:51848025-51848044 | None:intergenic | 20.0% |
!! | ATTAATCAAATGAAAGTGAA+AGG | - | chr1.1:51848147-51848166 | None:intergenic | 20.0% |
!! | TAAAAGAGAAAATTGGTTAT+GGG | + | chr1.1:51847789-51847808 | MS.gene89591:intron | 20.0% |
!! | TAACATGAAAAATTGCTTAT+TGG | - | chr1.1:51848844-51848863 | None:intergenic | 20.0% |
!! | TACAACATCATTAATTAACT+TGG | + | chr1.1:51847573-51847592 | MS.gene89591:intron | 20.0% |
!! | TAGAGATCATAATATTGTTT+GGG | - | chr1.1:51848024-51848043 | None:intergenic | 20.0% |
!! | TTACAAAAAAATCACAAATG+AGG | + | chr1.1:51847352-51847371 | MS.gene89591:CDS | 20.0% |
!! | TTATGTTACAATTTATGACA+AGG | - | chr1.1:51848380-51848399 | None:intergenic | 20.0% |
!!! | AAAGTTTCCTTCTTTTAAAA+AGG | - | chr1.1:51847679-51847698 | None:intergenic | 20.0% |
!!! | ATATTTGCCTTTTTAAAAGA+AGG | + | chr1.1:51847669-51847688 | MS.gene89591:intron | 20.0% |
!!! | ATTAATCAAACATTAGCTTA+TGG | + | chr1.1:51848772-51848791 | MS.gene89591:intron | 20.0% |
!!! | CATTTGTGATTTTTTTGTAA+AGG | - | chr1.1:51847352-51847371 | None:intergenic | 20.0% |
!!! | GTATATTTTGTAGACTTTAA+TGG | - | chr1.1:51848578-51848597 | None:intergenic | 20.0% |
!!! | TTTTTAAAAGAAGGAAACTT+TGG | + | chr1.1:51847678-51847697 | MS.gene89591:intron | 20.0% |
!!! | TTTTTTTGTAAAGGTAATGA+AGG | - | chr1.1:51847343-51847362 | None:intergenic | 20.0% |
!!! | TTTTTTTTTTTATTCAGAGG+TGG | + | chr1.1:51849275-51849294 | MS.gene89591:intron | 20.0% |
! | AAAAGAGAAAATTGGTTATG+GGG | + | chr1.1:51847790-51847809 | MS.gene89591:intron | 25.0% |
! | ACTGAAAAATACAAAGAGAA+CGG | + | chr1.1:51848897-51848916 | MS.gene89591:intron | 25.0% |
! | ATACACTATCAAAGCAAAAT+AGG | + | chr1.1:51848491-51848510 | MS.gene89591:intron | 25.0% |
! | ATATAGACTTAAATACATGC+AGG | - | chr1.1:51848241-51848260 | None:intergenic | 25.0% |
! | TCAATGATTAAGGCTATTAA+TGG | + | chr1.1:51847855-51847874 | MS.gene89591:intron | 25.0% |
! | TTACAATTTATGACAAGGTA+TGG | - | chr1.1:51848375-51848394 | None:intergenic | 25.0% |
!! | AAACTCCTCTTTTTGTAAAT+GGG | + | chr1.1:51848869-51848888 | MS.gene89591:intron | 25.0% |
!! | ATCGTTATTGATGGTAAAAT+TGG | + | chr1.1:51848619-51848638 | MS.gene89591:intron | 25.0% |
!! | ATCTTTCACACAAATGTTTT+GGG | + | chr1.1:51848299-51848318 | MS.gene89591:intron | 25.0% |
!! | TCTTTTGTGAATGATAATTG+AGG | + | chr1.1:51848343-51848362 | MS.gene89591:intron | 25.0% |
!! | TTTTCTTTATGCGGTTAAAA+CGG | + | chr1.1:51848083-51848102 | MS.gene89591:intron | 25.0% |
AATTGACATTCACAAACACA+TGG | + | chr1.1:51847548-51847567 | MS.gene89591:intron | 30.0% | |
AGAAAGTCGTCATACAAAAT+AGG | + | chr1.1:51848456-51848475 | MS.gene89591:intron | 30.0% | |
CATGCATGAATAGAGATAAT+AGG | - | chr1.1:51849244-51849263 | None:intergenic | 30.0% | |
GTGAAAGATCAAATGTTGTA+TGG | - | chr1.1:51848288-51848307 | None:intergenic | 30.0% | |
GTTCAGTTCTTCAATGATTA+AGG | + | chr1.1:51847845-51847864 | MS.gene89591:intron | 30.0% | |
TAAAACCTGTGGCATATTTA+CGG | - | chr1.1:51849344-51849363 | None:intergenic | 30.0% | |
TATGGAAAAACATGTGACTT+AGG | - | chr1.1:51849205-51849224 | None:intergenic | 30.0% | |
! | AACTCCTCTTTTTGTAAATG+GGG | + | chr1.1:51848870-51848889 | MS.gene89591:intron | 30.0% |
! | AAGTCACATGTTTTTCCATA+TGG | + | chr1.1:51849205-51849224 | MS.gene89591:intron | 30.0% |
! | CAAACTCCTCTTTTTGTAAA+TGG | + | chr1.1:51848868-51848887 | MS.gene89591:intron | 30.0% |
! | GATCTTTCACACAAATGTTT+TGG | + | chr1.1:51848298-51848317 | MS.gene89591:intron | 30.0% |
!! | CTCTAGGTATTTTACTTTTG+TGG | + | chr1.1:51848109-51848128 | MS.gene89591:intron | 30.0% |
!! | TCTTCTTGCTTTTCTTTATG+CGG | + | chr1.1:51848074-51848093 | MS.gene89591:intron | 30.0% |
!! | TTTCAAGTTTCCAATTGAGA+CGG | - | chr1.1:51848993-51849012 | None:intergenic | 30.0% |
!!! | ACCTAAGCATGTTATTTTTG+GGG | - | chr1.1:51848962-51848981 | None:intergenic | 30.0% |
!!! | GACCTAAGCATGTTATTTTT+GGG | - | chr1.1:51848963-51848982 | None:intergenic | 30.0% |
!!! | GGTCAATTTTTAGTACCATA+TGG | - | chr1.1:51849223-51849242 | None:intergenic | 30.0% |
!!! | TGACCTAAGCATGTTATTTT+TGG | - | chr1.1:51848964-51848983 | None:intergenic | 30.0% |
ACAAATGAGGATGTTCTCAA+GGG | + | chr1.1:51847365-51847384 | MS.gene89591:CDS | 35.0% | |
ACCCCAAAAATAACATGCTT+AGG | + | chr1.1:51848958-51848977 | MS.gene89591:intron | 35.0% | |
CAAATGGAATCAAAACAGGT+TGG | + | chr1.1:51849490-51849509 | MS.gene89591:CDS | 35.0% | |
GAAAAACATGTGACTTAGGT+AGG | - | chr1.1:51849201-51849220 | None:intergenic | 35.0% | |
GACTTAGGTAGGTAAAACAA+GGG | - | chr1.1:51849190-51849209 | None:intergenic | 35.0% | |
GGAAAACTCTAGTGTTCTAT+AGG | + | chr1.1:51849457-51849476 | MS.gene89591:CDS | 35.0% | |
TACGGCAGAAAAAAACAACT+AGG | - | chr1.1:51847994-51848013 | None:intergenic | 35.0% | |
TAGGATAAAATCGAAAGCCA+GGG | - | chr1.1:51847304-51847323 | None:intergenic | 35.0% | |
TATAGGAATAGAGCTCCAAA+TGG | + | chr1.1:51849474-51849493 | MS.gene89591:CDS | 35.0% | |
TGACTTAGGTAGGTAAAACA+AGG | - | chr1.1:51849191-51849210 | None:intergenic | 35.0% | |
TGCTTTGCGAATATTCTGTA+AGG | + | chr1.1:51848694-51848713 | MS.gene89591:intron | 35.0% | |
TTATCCTAGTGATGAAGAGT+TGG | + | chr1.1:51847316-51847335 | MS.gene89591:CDS | 35.0% | |
TTCACCCCATTTACAAAAAG+AGG | - | chr1.1:51848877-51848896 | None:intergenic | 35.0% | |
!!! | CAACCTGTTTTGATTCCATT+TGG | - | chr1.1:51849492-51849511 | None:intergenic | 35.0% |
!!! | CACAGGTTTTAGAACCAATA+GGG | + | chr1.1:51849353-51849372 | MS.gene89591:CDS | 35.0% |
AGGATAAAATCGAAAGCCAG+GGG | - | chr1.1:51847303-51847322 | None:intergenic | 40.0% | |
ATGCAAGTCAATTTCCTCCA+AGG | - | chr1.1:51847393-51847412 | None:intergenic | 40.0% | |
CACAAATGAGGATGTTCTCA+AGG | + | chr1.1:51847364-51847383 | MS.gene89591:CDS | 40.0% | |
CTAAACTCAACGCAACTGAA+TGG | + | chr1.1:51849298-51849317 | MS.gene89591:CDS | 40.0% | |
CTAGGATAAAATCGAAAGCC+AGG | - | chr1.1:51847305-51847324 | None:intergenic | 40.0% | |
GATCATGCATGAGTTTAGGT+TGG | + | chr1.1:51849512-51849531 | MS.gene89591:CDS | 40.0% | |
GCTCCAAATGGAATCAAAAC+AGG | + | chr1.1:51849486-51849505 | MS.gene89591:CDS | 40.0% | |
GTATTGGAAAGCAACAGGAA+AGG | + | chr1.1:51849389-51849408 | MS.gene89591:CDS | 40.0% | |
GTTGGATCATGCATGAGTTT+AGG | + | chr1.1:51849508-51849527 | MS.gene89591:CDS | 40.0% | |
GTTTGATCCAATCACACATG+AGG | + | chr1.1:51849422-51849441 | MS.gene89591:CDS | 40.0% | |
TATATACCAGGAAGTTGCCA+AGG | - | chr1.1:51847425-51847444 | None:intergenic | 40.0% | |
! | GTCACTTTATCCGTCTCAAT+TGG | + | chr1.1:51848980-51848999 | MS.gene89591:intron | 40.0% |
! | TATTGTTTGGGACGCGTTTA+CGG | - | chr1.1:51848012-51848031 | None:intergenic | 40.0% |
!! | CCTATTGGTTCTAAAACCTG+TGG | - | chr1.1:51849355-51849374 | None:intergenic | 40.0% |
!!! | CCACAGGTTTTAGAACCAAT+AGG | + | chr1.1:51849352-51849371 | MS.gene89591:CDS | 40.0% |
ACCAATAGGGCAACAACATC+TGG | + | chr1.1:51849366-51849385 | MS.gene89591:CDS | 45.0% | |
AGCAACAGGAAAGGATCGAA+CGG | + | chr1.1:51849398-51849417 | MS.gene89591:CDS | 45.0% | |
AGGACCAACTCTTCATCACT+AGG | - | chr1.1:51847323-51847342 | None:intergenic | 45.0% | |
CACATGAGGTTGTAGGAATG+AGG | + | chr1.1:51849436-51849455 | MS.gene89591:CDS | 45.0% | |
CCAATAGGGCAACAACATCT+GGG | + | chr1.1:51849367-51849386 | MS.gene89591:CDS | 45.0% | |
CCAATCACACATGAGGTTGT+AGG | + | chr1.1:51849429-51849448 | MS.gene89591:CDS | 45.0% | |
CCTACAACCTCATGTGTGAT+TGG | - | chr1.1:51849432-51849451 | None:intergenic | 45.0% | |
GGATAAAATCGAAAGCCAGG+GGG | - | chr1.1:51847302-51847321 | None:intergenic | 45.0% | |
! | GGGGTTTTGCAGTTACGTTA+CGG | + | chr1.1:51847809-51847828 | MS.gene89591:intron | 45.0% |
!! | TCTGGGTATTGGAAAGCAAC+AGG | + | chr1.1:51849384-51849403 | MS.gene89591:CDS | 45.0% |
ACTTGCATACATGCGAGCCT+TGG | + | chr1.1:51847405-51847424 | MS.gene89591:CDS | 50.0% | |
CCCAGATGTTGTTGCCCTAT+TGG | - | chr1.1:51849370-51849389 | None:intergenic | 50.0% | |
CGTGACCGTAAATATGCCAC+AGG | + | chr1.1:51849336-51849355 | MS.gene89591:CDS | 50.0% | |
GCGGTTAAAACGGCTTCTCT+AGG | + | chr1.1:51848093-51848112 | MS.gene89591:intron | 50.0% | |
GGGCAACAACATCTGGGTAT+TGG | + | chr1.1:51849373-51849392 | MS.gene89591:CDS | 50.0% | |
!! | GGATGTTCTCAAGGGTACCT+TGG | + | chr1.1:51847373-51847392 | MS.gene89591:CDS | 50.0% |
!! | TGTTCTCAAGGGTACCTTGG+AGG | + | chr1.1:51847376-51847395 | MS.gene89591:CDS | 50.0% |
TGCGAGCCTTGGCAACTTCC+TGG | + | chr1.1:51847416-51847435 | MS.gene89591:CDS | 60.0% | |
! | GTCGGTGCTTCACTTCCCCC+TGG | + | chr1.1:51847284-51847303 | MS.gene89591:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 51847269 | 51849557 | 51847269 | ID=MS.gene89591 |
chr1.1 | mRNA | 51847269 | 51849557 | 51847269 | ID=MS.gene89591.t1;Parent=MS.gene89591 |
chr1.1 | exon | 51847269 | 51847437 | 51847269 | ID=MS.gene89591.t1.exon1;Parent=MS.gene89591.t1 |
chr1.1 | CDS | 51847269 | 51847437 | 51847269 | ID=cds.MS.gene89591.t1;Parent=MS.gene89591.t1 |
chr1.1 | exon | 51849292 | 51849557 | 51849292 | ID=MS.gene89591.t1.exon2;Parent=MS.gene89591.t1 |
chr1.1 | CDS | 51849292 | 51849557 | 51849292 | ID=cds.MS.gene89591.t1;Parent=MS.gene89591.t1 |
Gene Sequence |
Protein sequence |