AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene89643

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89643.t1 MTR_8g076110 95.302 149 0 1 1 149 2 143 2.86e-104 300
MS.gene89643.t1 MTR_5g021710 85.906 149 14 1 1 149 4 145 7.01e-94 275
MS.gene89643.t1 MTR_4g036030 79.592 147 23 1 3 149 5 144 4.98e-84 250
MS.gene89643.t1 MTR_1g096430 74.667 150 31 1 1 150 3 145 3.21e-82 245
MS.gene89643.t1 MTR_4g101680 76.190 147 28 1 3 149 5 144 3.51e-80 241
MS.gene89643.t1 MTR_5g012080 75.172 145 28 2 3 146 5 142 4.62e-77 233
MS.gene89643.t1 MTR_2g062730 70.470 149 36 2 2 149 7 148 3.10e-71 218
MS.gene89643.t1 MTR_8g024480 71.429 140 33 1 2 141 12 144 2.71e-70 218
MS.gene89643.t1 MTR_4g035590 72.263 137 31 1 5 141 8 137 1.76e-69 213
MS.gene89643.t1 MTR_2g064090 55.944 143 53 3 5 147 6 138 1.30e-54 175
MS.gene89643.t1 MTR_5g076850 57.857 140 51 3 5 144 6 137 3.69e-54 180
MS.gene89643.t1 MTR_6g477900 55.714 140 54 2 5 144 6 137 8.83e-54 170
MS.gene89643.t1 MTR_3g064580 54.422 147 59 2 4 150 5 143 3.42e-53 178
MS.gene89643.t1 MTR_3g435150 55.705 149 53 3 5 150 16 154 1.85e-52 168
MS.gene89643.t1 MTR_4g108760 54.362 149 55 3 5 150 17 155 2.48e-52 169
MS.gene89643.t1 MTR_6g012670 57.664 137 48 2 5 141 20 146 1.70e-51 166
MS.gene89643.t1 MTR_6g084430 52.817 142 57 1 1 142 1 132 5.18e-51 165
MS.gene89643.t1 MTR_7g085260 55.319 141 49 3 5 141 17 147 6.91e-51 166
MS.gene89643.t1 MTR_2g078700 55.396 139 50 3 5 141 23 151 1.97e-50 165
MS.gene89643.t1 MTR_6g032770 53.237 139 53 2 5 141 18 146 7.33e-49 161
MS.gene89643.t1 MTR_1g008740 52.083 144 56 4 2 142 10 143 9.48e-49 160
MS.gene89643.t1 MTR_7g085220 48.077 156 60 4 2 148 5 148 1.03e-48 160
MS.gene89643.t1 MTR_1g008740 52.083 144 56 4 2 142 24 157 1.13e-48 160
MS.gene89643.t1 MTR_7g011130 56.716 134 48 2 8 141 22 145 2.35e-48 159
MS.gene89643.t1 MTR_3g116070 54.362 149 55 4 2 147 20 158 2.49e-48 159
MS.gene89643.t1 MTR_5g041940 52.206 136 55 2 5 140 3 128 3.53e-48 156
MS.gene89643.t1 MTR_8g094580 55.000 140 52 3 5 144 7 135 4.18e-48 157
MS.gene89643.t1 MTR_4g081870 51.449 138 57 1 3 140 7 134 8.07e-48 155
MS.gene89643.t1 MTR_3g096920 51.408 142 58 2 5 146 7 137 9.19e-48 156
MS.gene89643.t1 MTR_3g088110 53.521 142 55 3 5 146 7 137 1.04e-47 155
MS.gene89643.t1 MTR_3g070030 53.676 136 53 2 6 141 20 145 1.27e-47 157
MS.gene89643.t1 MTR_3g096920 51.408 142 58 2 5 146 7 137 1.50e-47 156
MS.gene89643.t1 MTR_3g109340 49.650 143 60 3 2 142 19 151 2.23e-47 157
MS.gene89643.t1 MTR_3g109340 49.650 143 60 3 2 142 19 151 2.35e-47 157
MS.gene89643.t1 MTR_5g014300 54.545 143 50 4 5 140 6 140 5.30e-47 155
MS.gene89643.t1 MTR_6g011860 47.945 146 63 3 7 149 17 152 6.81e-47 156
MS.gene89643.t1 MTR_1g069805 50.336 149 61 3 3 149 8 145 7.09e-47 153
MS.gene89643.t1 MTR_7g005280 50.000 146 58 2 5 148 15 147 7.49e-47 152
MS.gene89643.t1 MTR_8g467490 48.276 145 63 2 1 143 10 144 8.59e-47 156
MS.gene89643.t1 MTR_5g040420 49.655 145 61 2 1 143 10 144 1.05e-46 156
MS.gene89643.t1 MTR_4g098630 53.191 141 55 3 3 140 4 136 1.27e-46 154
MS.gene89643.t1 MTR_7g097090 50.340 147 61 2 3 147 8 144 1.65e-46 153
MS.gene89643.t1 MTR_2g064470 49.660 147 62 3 1 147 7 141 3.96e-46 152
MS.gene89643.t1 MTR_2g080010 50.676 148 59 4 5 148 15 152 4.14e-46 153
MS.gene89643.t1 MTR_7g011120 54.412 136 52 2 8 143 11 136 4.36e-46 152
MS.gene89643.t1 MTR_1g097300 50.000 138 61 1 7 144 21 150 9.07e-46 157
MS.gene89643.t1 MTR_2157s0010 51.799 139 54 3 5 140 8 136 9.72e-46 150
MS.gene89643.t1 MTR_2g079990 52.206 136 55 2 5 140 16 141 1.26e-45 152
MS.gene89643.t1 MTR_4g089135 50.350 143 59 3 5 145 15 147 2.04e-45 151
MS.gene89643.t1 MTR_2g079990 52.206 136 55 2 5 140 16 141 2.09e-45 152
MS.gene89643.t1 MTR_3g096140 48.630 146 64 3 7 149 9 146 4.81e-45 149
MS.gene89643.t1 MTR_1g090720 51.471 136 58 2 3 138 40 167 6.57e-45 153
MS.gene89643.t1 MTR_8g059170 52.206 136 55 1 5 140 14 139 8.77e-45 149
MS.gene89643.t1 MTR_5g069030 51.852 135 57 1 5 139 25 151 1.22e-44 154
MS.gene89643.t1 MTR_7g100990 51.773 141 56 3 2 140 8 138 3.01e-44 148
MS.gene89643.t1 MTR_3g096140 48.630 146 64 3 7 149 9 146 4.00e-44 148
MS.gene89643.t1 MTR_2g093810 51.825 137 54 3 6 140 15 141 4.03e-44 147
MS.gene89643.t1 MTR_3g093040 46.575 146 68 2 5 148 108 245 1.64e-43 145
MS.gene89643.t1 MTR_8g063550 50.370 135 59 1 7 141 8 134 3.74e-43 145
MS.gene89643.t1 MTR_8g063550 50.370 135 59 1 7 141 8 134 9.67e-43 146
MS.gene89643.t1 MTR_8g063550 50.370 135 59 1 7 141 8 134 2.70e-42 145
MS.gene89643.t1 MTR_3g093050 50.370 135 59 1 5 139 22 148 4.17e-42 147
MS.gene89643.t1 MTR_3g093050 50.370 135 59 1 5 139 22 148 4.57e-42 147
MS.gene89643.t1 MTR_8g093580 48.889 135 61 1 7 141 8 134 6.04e-42 145
MS.gene89643.t1 MTR_1g090723 47.260 146 66 3 7 149 10 147 1.54e-41 146
MS.gene89643.t1 MTR_1g090723 47.260 146 66 3 7 149 10 147 1.55e-41 145
MS.gene89643.t1 MTR_2g086880 47.059 136 63 1 3 138 16 142 1.64e-41 144
MS.gene89643.t1 MTR_1g090723 47.260 146 66 3 7 149 10 147 1.65e-41 146
MS.gene89643.t1 MTR_0036s0150 48.889 135 60 2 7 140 7 133 2.40e-41 144
MS.gene89643.t1 MTR_5g090970 47.887 142 61 2 2 140 15 146 4.13e-41 139
MS.gene89643.t1 MTR_2g086880 47.059 136 63 1 3 138 16 142 5.63e-41 144
MS.gene89643.t1 MTR_3g070040 50.000 134 52 2 9 141 12 131 9.49e-41 139
MS.gene89643.t1 MTR_5g090970 48.592 142 59 3 2 140 15 145 2.72e-40 137
MS.gene89643.t1 MTR_8g099750 46.622 148 65 3 5 150 14 149 3.43e-40 135
MS.gene89643.t1 MTR_2g068920 48.571 140 59 3 7 142 23 153 3.88e-40 136
MS.gene89643.t1 MTR_2g068880 48.551 138 58 3 7 140 24 152 5.07e-40 137
MS.gene89643.t1 MTR_4g075980 46.980 149 64 4 2 147 12 148 7.74e-40 136
MS.gene89643.t1 MTR_4g134460 47.101 138 62 2 4 140 53 180 4.12e-39 137
MS.gene89643.t1 MTR_4g052620 46.452 155 71 5 1 149 1 149 1.22e-37 129
MS.gene89643.t1 MTR_3g098810 44.755 143 63 2 5 143 14 144 7.95e-37 124
MS.gene89643.t1 MTR_3g098810 44.755 143 63 2 5 143 14 144 6.47e-36 124
MS.gene89643.t1 MTR_2g086690 49.635 137 60 6 6 139 5 135 3.55e-35 122
MS.gene89643.t1 MTR_3g096140 44.697 132 62 3 21 149 2 125 6.05e-35 124
MS.gene89643.t1 MTR_8g023840 44.681 141 66 4 5 142 11 142 1.68e-33 121
MS.gene89643.t1 MTR_8g023860 43.750 144 69 4 5 145 12 146 3.11e-32 118
MS.gene89643.t1 MTR_4g094302 42.029 138 60 4 5 140 11 130 1.99e-30 108
MS.gene89643.t1 MTR_4g094302 42.029 138 60 4 5 140 11 130 8.24e-30 107
MS.gene89643.t1 MTR_8g023900 41.135 141 71 4 1 138 8 139 6.06e-29 110
MS.gene89643.t1 MTR_8g023900 40.260 154 75 6 1 146 184 328 1.69e-26 103
MS.gene89643.t1 MTR_7g105170 37.241 145 82 3 5 146 4 142 2.88e-27 102
MS.gene89643.t1 MTR_8g023930 43.066 137 66 5 5 138 24 151 3.36e-27 105
MS.gene89643.t1 MTR_8g094580 58.442 77 31 1 68 144 6 81 3.86e-27 101
MS.gene89643.t1 MTR_7g070140 49.425 87 41 2 63 147 13 98 2.21e-24 92.0
MS.gene89643.t1 MTR_8g023880 34.641 153 72 6 3 138 5 146 8.11e-21 85.9
MS.gene89643.t1 MTR_8g093790 35.507 138 63 6 5 142 10 121 7.44e-16 71.2
MS.gene89643.t1 MTR_7g083330 29.286 140 87 4 5 143 18 146 2.15e-14 67.4
MS.gene89643.t1 MTR_7g083360 28.986 138 86 5 2 138 7 133 3.46e-13 63.5
MS.gene89643.t1 MTR_7g070150 57.895 38 16 0 110 147 7 44 7.62e-12 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89643.t1 AT2G18060 84.667 150 15 2 1 149 4 146 1.74e-91 270
MS.gene89643.t1 AT2G18060 84.667 150 15 2 1 149 4 146 1.74e-91 270
MS.gene89643.t1 AT4G36160 84.564 149 15 2 2 149 10 151 7.27e-90 266
MS.gene89643.t1 AT4G36160 84.564 149 15 2 2 149 6 147 8.02e-90 266
MS.gene89643.t1 AT4G36160 84.564 149 15 2 2 149 6 147 8.02e-90 266
MS.gene89643.t1 AT5G66300 77.852 149 24 3 3 149 9 150 2.68e-82 244
MS.gene89643.t1 AT1G12260 78.231 147 25 1 3 149 5 144 1.07e-81 244
MS.gene89643.t1 AT1G62700 78.231 147 25 1 3 149 5 144 1.14e-81 246
MS.gene89643.t1 AT1G62700 78.231 147 25 1 3 149 5 144 1.14e-81 246
MS.gene89643.t1 AT1G12260 78.231 147 25 1 3 149 5 144 1.84e-81 245
MS.gene89643.t1 AT1G71930 69.799 149 38 1 1 149 5 146 2.63e-75 227
MS.gene89643.t1 AT1G71930 69.799 149 38 1 1 149 5 146 2.63e-75 227
MS.gene89643.t1 AT5G62380 70.000 150 36 2 1 148 1 143 1.72e-73 223
MS.gene89643.t1 AT5G62380 70.000 150 36 2 1 148 1 143 1.72e-73 223
MS.gene89643.t1 AT2G46770 70.714 140 34 1 2 141 13 145 5.42e-70 215
MS.gene89643.t1 AT1G32770 71.429 140 33 1 2 141 13 145 8.10e-70 214
MS.gene89643.t1 AT1G33280 68.531 143 38 1 5 147 8 143 8.65e-70 213
MS.gene89643.t1 AT4G10350 68.493 146 37 2 5 150 9 145 1.11e-69 214
MS.gene89643.t1 AT3G61910 69.286 140 36 1 2 141 8 140 8.42e-69 211
MS.gene89643.t1 AT1G79580 69.718 142 35 2 5 145 17 151 4.58e-67 208
MS.gene89643.t1 AT1G79580 69.718 142 35 2 5 145 17 151 4.58e-67 208
MS.gene89643.t1 AT1G79580 69.718 142 35 2 5 145 17 151 4.58e-67 208
MS.gene89643.t1 AT1G79580 69.718 142 35 2 5 145 17 151 4.58e-67 208
MS.gene89643.t1 AT1G79580 69.718 142 35 2 5 145 17 151 4.58e-67 208
MS.gene89643.t1 AT3G17730 53.741 147 60 2 5 151 6 144 3.65e-55 174
MS.gene89643.t1 AT1G65910 57.143 140 52 2 5 144 6 137 2.88e-53 178
MS.gene89643.t1 AT3G18400 54.225 142 55 1 1 142 1 132 8.39e-53 169
MS.gene89643.t1 AT3G03200 55.944 143 55 2 5 147 6 140 1.07e-52 174
MS.gene89643.t1 AT5G17260 54.167 144 58 2 4 147 5 140 2.23e-52 172
MS.gene89643.t1 AT5G39610 55.034 149 54 3 5 150 20 158 3.38e-52 167
MS.gene89643.t1 AT3G29035 56.934 137 49 2 5 141 24 150 7.74e-52 167
MS.gene89643.t1 AT5G46590 57.554 139 50 3 3 140 4 134 1.47e-51 166
MS.gene89643.t1 AT5G46590 57.554 139 50 3 3 140 4 134 1.60e-51 166
MS.gene89643.t1 AT5G07680 53.691 149 56 3 5 150 3 141 1.91e-51 166
MS.gene89643.t1 AT5G61430 54.362 149 55 3 5 150 16 154 2.09e-51 167
MS.gene89643.t1 AT5G07680 53.691 149 56 3 5 150 17 155 3.57e-51 166
MS.gene89643.t1 AT2G24430 53.147 143 55 3 2 142 13 145 1.06e-50 164
MS.gene89643.t1 AT2G24430 53.147 143 55 3 2 142 13 145 1.06e-50 164
MS.gene89643.t1 AT4G17980 53.103 145 58 3 3 145 4 140 1.08e-50 162
MS.gene89643.t1 AT4G17980 53.103 145 58 3 3 145 4 140 2.44e-50 162
MS.gene89643.t1 AT3G15170 55.634 142 51 4 2 141 17 148 1.07e-49 161
MS.gene89643.t1 AT1G54330 58.088 136 49 2 5 140 6 133 1.46e-49 161
MS.gene89643.t1 AT5G53950 55.396 139 50 3 5 141 17 145 3.11e-49 162
MS.gene89643.t1 AT3G10490 52.143 140 59 1 1 140 23 154 4.63e-49 158
MS.gene89643.t1 AT1G77450 55.319 141 52 3 6 146 11 140 4.99e-49 158
MS.gene89643.t1 AT3G10480 53.623 138 56 1 3 140 25 154 5.22e-49 163
MS.gene89643.t1 AT3G10480 53.623 138 56 1 3 140 25 154 5.32e-49 163
MS.gene89643.t1 AT1G01720 53.521 142 55 3 5 146 7 137 1.19e-48 158
MS.gene89643.t1 AT1G69490 49.655 145 63 2 2 146 6 140 1.24e-48 157
MS.gene89643.t1 AT1G76420 55.245 143 52 3 2 142 19 151 2.37e-48 159
MS.gene89643.t1 AT5G63790 53.846 143 55 3 2 144 47 178 5.09e-48 157
MS.gene89643.t1 AT5G63790 53.846 143 55 3 2 144 57 188 5.98e-48 157
MS.gene89643.t1 AT5G18270 52.899 138 54 3 5 141 21 148 7.20e-48 157
MS.gene89643.t1 AT3G10490 52.899 138 57 1 3 140 25 154 8.19e-48 160
MS.gene89643.t1 AT5G08790 53.793 145 56 3 2 146 4 137 1.77e-47 155
MS.gene89643.t1 AT5G18270 52.174 138 55 3 5 141 21 148 1.83e-47 156
MS.gene89643.t1 AT3G12977 50.355 141 60 2 1 141 14 144 4.91e-47 154
MS.gene89643.t1 AT3G04060 51.449 138 56 2 5 141 20 147 2.56e-46 154
MS.gene89643.t1 AT1G56010 47.712 153 67 4 1 151 15 156 3.79e-46 153
MS.gene89643.t1 AT3G04070 50.350 143 56 3 3 140 8 140 5.54e-46 153
MS.gene89643.t1 AT1G61110 52.555 137 54 2 5 140 16 142 7.59e-46 152
MS.gene89643.t1 AT5G24590 54.412 136 53 2 5 139 13 140 8.92e-46 155
MS.gene89643.t1 AT3G04070 50.350 143 56 3 3 140 8 140 8.93e-46 153
MS.gene89643.t1 AT4G35580 53.237 139 56 2 1 139 6 135 8.93e-46 156
MS.gene89643.t1 AT4G27410 51.825 137 56 2 4 140 13 139 9.42e-46 151
MS.gene89643.t1 AT4G35580 53.237 139 56 2 1 139 6 135 1.28e-45 156
MS.gene89643.t1 AT4G35580 53.237 139 56 2 1 139 6 135 1.33e-45 156
MS.gene89643.t1 AT1G33060 50.735 136 59 1 4 139 23 150 2.44e-45 157
MS.gene89643.t1 AT1G33060 50.735 136 59 1 4 139 23 150 2.46e-45 157
MS.gene89643.t1 AT4G10350 76.087 92 20 1 59 150 9 98 2.83e-45 150
MS.gene89643.t1 AT5G39820 46.259 147 67 2 2 146 17 153 4.49e-45 150
MS.gene89643.t1 AT2G33480 50.000 136 55 1 5 140 15 137 5.87e-45 148
MS.gene89643.t1 AT2G43000 49.655 145 61 2 7 149 20 154 6.52e-45 148
MS.gene89643.t1 AT2G33480 50.000 136 55 1 5 140 15 137 7.28e-45 148
MS.gene89643.t1 AT4G27410 49.650 143 65 2 5 140 14 156 8.53e-45 149
MS.gene89643.t1 AT3G10500 50.000 138 61 2 3 140 7 136 1.16e-44 154
MS.gene89643.t1 AT3G15500 51.095 137 57 2 4 140 13 139 1.42e-44 149
MS.gene89643.t1 AT5G13180 52.899 138 50 3 5 140 14 138 2.34e-44 146
MS.gene89643.t1 AT5G04410 50.000 138 61 1 3 140 7 136 2.78e-44 153
MS.gene89643.t1 AT1G26870 49.645 141 59 3 1 139 12 142 5.19e-44 149
MS.gene89643.t1 AT1G32510 48.276 145 60 3 3 140 4 140 1.09e-43 145
MS.gene89643.t1 AT1G34180 44.928 138 68 1 7 144 18 147 1.19e-43 151
MS.gene89643.t1 AT1G52890 50.365 137 58 2 4 140 13 139 1.40e-43 146
MS.gene89643.t1 AT4G28530 49.390 164 52 6 5 149 10 161 2.21e-43 146
MS.gene89643.t1 AT3G49530 49.265 136 60 2 5 139 13 140 2.49e-43 147
MS.gene89643.t1 AT3G10480 44.512 164 64 3 3 140 25 187 2.89e-43 149
MS.gene89643.t1 AT1G34180 44.928 138 68 1 7 144 18 147 3.27e-43 148
MS.gene89643.t1 AT3G49530 49.265 136 60 2 5 139 13 140 4.16e-43 148
MS.gene89643.t1 AT3G15510 49.645 141 57 3 9 147 21 149 1.51e-42 144
MS.gene89643.t1 AT1G34180 43.662 142 76 2 7 144 18 159 1.57e-42 146
MS.gene89643.t1 AT1G34180 44.366 142 75 3 7 144 18 159 2.13e-42 148
MS.gene89643.t1 AT1G34190 44.203 138 69 1 7 144 18 147 2.61e-42 147
MS.gene89643.t1 AT2G27300 43.624 149 72 2 3 151 12 148 1.58e-41 141
MS.gene89643.t1 AT2G02450 47.826 138 61 3 4 140 50 177 5.66e-40 138
MS.gene89643.t1 AT3G12910 50.676 148 55 5 7 148 23 158 5.73e-40 136
MS.gene89643.t1 AT2G02450 47.826 138 61 3 4 140 50 177 9.14e-40 138
MS.gene89643.t1 AT5G04395 45.098 153 78 3 2 148 25 177 9.65e-40 132
MS.gene89643.t1 AT5G64060 47.407 135 63 1 7 141 8 134 1.15e-39 137
MS.gene89643.t1 AT5G09330 46.667 135 64 2 7 141 8 134 1.80e-39 139
MS.gene89643.t1 AT5G09330 46.667 135 64 2 7 141 8 134 1.80e-39 139
MS.gene89643.t1 AT5G09330 46.667 135 64 2 7 141 8 134 1.80e-39 139
MS.gene89643.t1 AT5G09330 46.667 135 64 2 7 141 8 134 1.80e-39 139
MS.gene89643.t1 AT5G09330 46.667 135 64 2 7 141 8 134 1.80e-39 139
MS.gene89643.t1 AT5G22290 43.972 141 70 1 3 143 19 150 3.28e-39 135
MS.gene89643.t1 AT2G17040 46.715 137 60 3 7 140 8 134 3.71e-39 134
MS.gene89643.t1 AT3G44290 43.182 132 66 1 7 138 16 138 4.54e-38 129
MS.gene89643.t1 AT3G44290 43.939 132 65 2 7 138 16 138 2.59e-37 130
MS.gene89643.t1 AT1G32870 47.101 138 63 3 7 144 12 139 1.93e-36 131
MS.gene89643.t1 AT1G32870 47.101 138 63 3 7 144 12 139 2.00e-36 131
MS.gene89643.t1 AT1G52880 47.552 143 59 3 9 147 21 151 2.14e-36 127
MS.gene89643.t1 AT1G32870 47.101 138 63 3 7 144 48 175 3.17e-36 131
MS.gene89643.t1 AT5G61430 63.953 86 28 1 68 150 6 91 6.53e-35 122
MS.gene89643.t1 AT3G12977 57.778 90 35 1 52 141 5 91 2.31e-34 120
MS.gene89643.t1 AT1G56010 58.537 82 34 0 70 151 8 89 1.95e-33 118
MS.gene89643.t1 AT2G18060 87.931 58 7 0 92 149 1 58 1.24e-32 117
MS.gene89643.t1 AT3G44350 41.096 146 76 6 8 151 8 145 7.41e-29 103
MS.gene89643.t1 AT5G22380 41.844 141 73 5 1 138 1 135 2.44e-28 104
MS.gene89643.t1 AT3G44350 41.096 146 76 6 8 151 8 145 3.26e-28 104
MS.gene89643.t1 AT2G33480 53.846 78 36 0 63 140 3 80 2.19e-27 101
MS.gene89643.t1 AT4G28530 42.446 139 50 5 5 124 10 137 2.04e-24 96.3
MS.gene89643.t1 AT5G64530 38.406 138 61 5 5 140 3 118 7.62e-24 91.3
MS.gene89643.t1 AT1G02230 42.754 138 63 7 6 138 4 130 1.37e-23 94.7
MS.gene89643.t1 AT5G64530 38.406 138 61 5 5 140 3 118 2.10e-23 90.9
MS.gene89643.t1 AT1G02250 40.580 138 66 5 6 138 4 130 2.34e-23 94.0
MS.gene89643.t1 AT3G04420 37.778 135 74 4 6 138 4 130 2.28e-22 90.5
MS.gene89643.t1 AT4G01520 34.286 140 79 4 6 140 5 136 2.95e-22 90.1
MS.gene89643.t1 AT3G04420 37.778 135 74 4 6 138 4 130 4.22e-22 90.5
MS.gene89643.t1 AT1G01010 35.616 146 74 6 8 143 6 141 4.14e-21 88.6
MS.gene89643.t1 AT4G01540 34.783 138 77 4 8 140 7 136 5.87e-21 88.2
MS.gene89643.t1 AT4G01540 34.783 138 77 4 8 140 7 136 6.29e-21 88.2
MS.gene89643.t1 AT4G01540 34.783 138 77 4 8 140 7 136 6.68e-21 87.8
MS.gene89643.t1 AT4G01540 34.783 138 77 4 8 140 7 136 6.75e-21 87.8
MS.gene89643.t1 AT4G01550 35.036 137 77 3 8 140 7 135 4.08e-20 85.9
MS.gene89643.t1 AT5G50820 36.552 145 60 5 5 140 17 138 2.81e-19 80.1
MS.gene89643.t1 AT3G10490 60.377 53 21 0 88 140 2 54 5.14e-18 79.3
MS.gene89643.t1 AT3G10490 60.377 53 21 0 88 140 2 54 5.14e-18 79.3
MS.gene89643.t1 AT2G43000 50.746 67 33 0 77 143 2 68 5.61e-18 77.0
MS.gene89643.t1 AT1G02220 36.029 136 74 5 5 138 3 127 2.25e-17 77.8
MS.gene89643.t1 AT3G56530 29.167 144 91 4 4 145 51 185 5.00e-16 73.6
MS.gene89643.t1 AT5G14000 28.472 144 89 2 5 146 15 146 1.22e-15 70.1
MS.gene89643.t1 AT5G14000 28.472 144 89 2 5 146 15 146 9.95e-15 68.6
MS.gene89643.t1 AT5G22290 54.000 50 23 0 94 143 2 51 3.72e-14 67.8
MS.gene89643.t1 AT3G55210 27.333 150 87 5 5 141 11 151 6.85e-12 62.0
MS.gene89643.t1 AT3G04430 31.915 141 72 6 11 138 6 135 1.34e-11 60.1
MS.gene89643.t1 AT1G28470 29.530 149 94 4 5 145 77 222 4.93e-11 59.7

Find 37 sgRNAs with CRISPR-Local

Find 64 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGCTACAATGGCAGGGTTC+TGG 0.317074 8.3:+27751061 MS.gene89643:CDS
TATACAGAGAGATGTAGAAT+TGG 0.372773 8.3:+27750964 MS.gene89643:CDS
ATTGGATCATGCATGAATAT+AGG 0.391373 8.3:+27751190 MS.gene89643:CDS
CATGTGTCCCACCGGGATTT+CGG 0.406683 8.3:+27750341 MS.gene89643:CDS
CCAACGGATGGAGAGCTTGT+TGG 0.439284 8.3:+27750370 MS.gene89643:CDS
TATGAACGAACAAAACTGAT+TGG 0.456318 8.3:+27751111 MS.gene89643:CDS
ACGAATAGAGCTACAATGGC+AGG 0.459411 8.3:+27751054 MS.gene89643:CDS
ATACAGAGAGATGTAGAATT+GGG 0.482735 8.3:+27750965 MS.gene89643:CDS
CTATTCGTTCTCGTCCCTGT+TGG 0.488529 8.3:-27751039 None:intergenic
TACAAAGGAAGAGCACCTAA+TGG 0.488869 8.3:+27751156 MS.gene89643:CDS
TCTATATCGTATTGAACCCT+GGG 0.494461 8.3:+27750456 MS.gene89643:CDS
CTAATGGACAGAAAACTGAT+TGG 0.497399 8.3:+27751172 MS.gene89643:CDS
AGCAACGGGAAGAGATAAAT+CGG 0.498313 8.3:+27751086 MS.gene89643:CDS
GAGATGTAGAATTGGGAATG+AGG 0.500296 8.3:+27750972 MS.gene89643:CDS
GCAGGGTTCTGGAAAGCAAC+GGG 0.502316 8.3:+27751072 MS.gene89643:CDS
TAATATACCTTGGAGATCCC+AGG 0.505717 8.3:-27750473 None:intergenic
CAACAAGCTCTCCATCCGTT+GGG 0.524228 8.3:-27750369 None:intergenic
GATGGAGTCATGTGTCCCAC+CGG 0.526138 8.3:+27750333 None:intergenic
ATCTATATCGTATTGAACCC+TGG 0.536507 8.3:+27750455 MS.gene89643:CDS
GTTGGGTGGAACCGAAATCC+CGG 0.537421 8.3:-27750352 None:intergenic
TTTCGGTTCCACCCAACGGA+TGG 0.543349 8.3:+27750358 MS.gene89643:CDS
AGTTGAAAATGCACCTCCAC+AGG 0.544633 8.3:+27751221 MS.gene89643:CDS
CCAACAAGCTCTCCATCCGT+TGG 0.549429 8.3:-27750370 None:intergenic
AATATACCTTGGAGATCCCA+GGG 0.582948 8.3:-27750472 None:intergenic
GAACAAAACTGATTGGAATG+AGG 0.589039 8.3:+27751118 MS.gene89643:CDS
GGGATTTCGGTTCCACCCAA+CGG 0.589314 8.3:+27750354 MS.gene89643:CDS
ATGGAGTCATGTGTCCCACC+GGG 0.595197 8.3:+27750334 MS.gene89643:CDS
GGCAGGGTTCTGGAAAGCAA+CGG 0.607507 8.3:+27751071 MS.gene89643:CDS
CAAGCTCTCCATCCGTTGGG+TGG 0.610660 8.3:-27750366 None:intergenic
ATTGAACCCTGGGATCTCCA+AGG 0.636482 8.3:+27750466 MS.gene89643:CDS
CGAATAGAGCTACAATGGCA+GGG 0.643373 8.3:+27751055 MS.gene89643:CDS
GAGAACGAATAGAGCTACAA+TGG 0.650530 8.3:+27751050 MS.gene89643:CDS
TATATGTATATACTTGCCTG+TGG 0.651237 8.3:-27751237 None:intergenic
GGGTGGAACCGAAATCCCGG+TGG 0.674752 8.3:-27750349 None:intergenic
GGTGGAACCGAAATCCCGGT+GGG 0.684050 8.3:-27750348 None:intergenic
GGAATGAGGAGCAACATGAG+TGG 0.701564 8.3:+27750986 MS.gene89643:CDS
ATGTATATACTTGCCTGTGG+AGG 0.709573 8.3:-27751234 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTAATTAATTAATCAAG+GGG - chr8.3:27751356-27751375 None:intergenic 10.0%
!! AAAAAAAGTTGAAATATCAA+CGG + chr8.3:27750662-27750681 MS.gene89643:intron 15.0%
!! ATATATATAGAACACAAAAT+AGG - chr8.3:27750922-27750941 None:intergenic 15.0%
!! TAAAATTTAGTAATATACCT+TGG - chr8.3:27750486-27750505 None:intergenic 15.0%
!! TAATTAGTAACTTTAGATAT+AGG + chr8.3:27751328-27751347 MS.gene89643:intron 15.0%
!! AAAGATAAAAAATATCCAAC+AGG + chr8.3:27751024-27751043 MS.gene89643:CDS 20.0%
!! AAGATAAAAAATATCCAACA+GGG + chr8.3:27751025-27751044 MS.gene89643:CDS 20.0%
!!! GTAGAAGTCTTAATTTTAAA+GGG + chr8.3:27751487-27751506 MS.gene89643:intron 20.0%
!!! TGTAGAAGTCTTAATTTTAA+AGG + chr8.3:27751486-27751505 MS.gene89643:intron 20.0%
! CAAACTCAACACATAATATA+TGG - chr8.3:27751271-27751290 None:intergenic 25.0%
! TATATTATGTGTTGAGTTTG+AGG + chr8.3:27751271-27751290 MS.gene89643:intron 25.0%
! TGTTAAAACCCTAATCAATA+GGG - chr8.3:27750883-27750902 None:intergenic 25.0%
! TGTTCTATATATATGCTGAA+AGG + chr8.3:27750928-27750947 MS.gene89643:intron 25.0%
!! TATTTTATGCGTTACTCTAT+AGG - chr8.3:27750846-27750865 None:intergenic 25.0%
!! TTGATTAACCCTATTGATTA+GGG + chr8.3:27750872-27750891 MS.gene89643:intron 25.0%
!! TTTGATTAACCCTATTGATT+AGG + chr8.3:27750871-27750890 MS.gene89643:intron 25.0%
ATACAGAGAGATGTAGAATT+GGG + chr8.3:27750965-27750984 MS.gene89643:CDS 30.0%
ATTGGATCATGCATGAATAT+AGG + chr8.3:27751190-27751209 MS.gene89643:CDS 30.0%
CTGTTAAAACCCTAATCAAT+AGG - chr8.3:27750884-27750903 None:intergenic 30.0%
TATACAGAGAGATGTAGAAT+TGG + chr8.3:27750964-27750983 MS.gene89643:CDS 30.0%
TATATGTATATACTTGCCTG+TGG - chr8.3:27751240-27751259 None:intergenic 30.0%
TATGAACGAACAAAACTGAT+TGG + chr8.3:27751111-27751130 MS.gene89643:CDS 30.0%
! ACAAGGATGTTTCTATAAGT+TGG + chr8.3:27751426-27751445 MS.gene89643:intron 30.0%
! TATAAGTTGGAGAATGAACA+CGG + chr8.3:27751439-27751458 MS.gene89643:intron 30.0%
!! AAGACACTTGTTTTCTACAA+AGG + chr8.3:27751141-27751160 MS.gene89643:CDS 30.0%
!! CTTGTTTTCTTGTCTGAAAA+AGG - chr8.3:27751411-27751430 None:intergenic 30.0%
!!! CTTTTTCAGACAAGAAAACA+AGG + chr8.3:27751409-27751428 MS.gene89643:intron 30.0%
ATCTATATCGTATTGAACCC+TGG + chr8.3:27750455-27750474 MS.gene89643:CDS 35.0%
GAACAAAACTGATTGGAATG+AGG + chr8.3:27751118-27751137 MS.gene89643:CDS 35.0%
TCTATATCGTATTGAACCCT+GGG + chr8.3:27750456-27750475 MS.gene89643:CDS 35.0%
! CAATCAGTTTTCTGTCCATT+AGG - chr8.3:27751174-27751193 None:intergenic 35.0%
! CTAATGGACAGAAAACTGAT+TGG + chr8.3:27751172-27751191 MS.gene89643:CDS 35.0%
AACCACGTTTAACATAGCGA+TGG + chr8.3:27750540-27750559 MS.gene89643:intron 40.0%
AACCATCGCTATGTTAAACG+TGG - chr8.3:27750545-27750564 None:intergenic 40.0%
AATATACCTTGGAGATCCCA+GGG - chr8.3:27750475-27750494 None:intergenic 40.0%
AGCAACGGGAAGAGATAAAT+CGG + chr8.3:27751086-27751105 MS.gene89643:CDS 40.0%
ATGTATATACTTGCCTGTGG+AGG - chr8.3:27751237-27751256 None:intergenic 40.0%
CATCAAGAGAGCGAAATACT+TGG - chr8.3:27751522-27751541 None:intergenic 40.0%
GAGAACGAATAGAGCTACAA+TGG + chr8.3:27751050-27751069 MS.gene89643:CDS 40.0%
GAGATGTAGAATTGGGAATG+AGG + chr8.3:27750972-27750991 MS.gene89643:CDS 40.0%
TAATATACCTTGGAGATCCC+AGG - chr8.3:27750476-27750495 None:intergenic 40.0%
!! TACAAAGGAAGAGCACCTAA+TGG + chr8.3:27751156-27751175 MS.gene89643:CDS 40.0%
ACGAATAGAGCTACAATGGC+AGG + chr8.3:27751054-27751073 MS.gene89643:CDS 45.0%
AGTTGAAAATGCACCTCCAC+AGG + chr8.3:27751221-27751240 MS.gene89643:CDS 45.0%
CGAATAGAGCTACAATGGCA+GGG + chr8.3:27751055-27751074 MS.gene89643:CDS 45.0%
!! TTAATTAATTAATTAATCAA+GGG - chr8.3:27751357-27751376 None:intergenic 5.0%
!! TTTAATTAATTAATTAATCA+AGG - chr8.3:27751358-27751377 None:intergenic 5.0%
ATTGAACCCTGGGATCTCCA+AGG + chr8.3:27750466-27750485 MS.gene89643:CDS 50.0%
CAACAAGCTCTCCATCCGTT+GGG - chr8.3:27750372-27750391 None:intergenic 50.0%
CTATTCGTTCTCGTCCCTGT+TGG - chr8.3:27751042-27751061 None:intergenic 50.0%
GGAATGAGGAGCAACATGAG+TGG + chr8.3:27750986-27751005 MS.gene89643:CDS 50.0%
ATGGAGTCATGTGTCCCACC+GGG + chr8.3:27750334-27750353 MS.gene89643:CDS 55.0%
CATGTGTCCCACCGGGATTT+CGG + chr8.3:27750341-27750360 MS.gene89643:CDS 55.0%
CCAACAAGCTCTCCATCCGT+TGG - chr8.3:27750373-27750392 None:intergenic 55.0%
CCAACGGATGGAGAGCTTGT+TGG + chr8.3:27750370-27750389 MS.gene89643:CDS 55.0%
GAGCTACAATGGCAGGGTTC+TGG + chr8.3:27751061-27751080 MS.gene89643:CDS 55.0%
GGGATTTCGGTTCCACCCAA+CGG + chr8.3:27750354-27750373 MS.gene89643:CDS 55.0%
GTTGGGTGGAACCGAAATCC+CGG - chr8.3:27750355-27750374 None:intergenic 55.0%
TTTCGGTTCCACCCAACGGA+TGG + chr8.3:27750358-27750377 MS.gene89643:CDS 55.0%
!! GCAGGGTTCTGGAAAGCAAC+GGG + chr8.3:27751072-27751091 MS.gene89643:CDS 55.0%
!! GGCAGGGTTCTGGAAAGCAA+CGG + chr8.3:27751071-27751090 MS.gene89643:CDS 55.0%
CAAGCTCTCCATCCGTTGGG+TGG - chr8.3:27750369-27750388 None:intergenic 60.0%
GGTGGAACCGAAATCCCGGT+GGG - chr8.3:27750351-27750370 None:intergenic 60.0%
GGGTGGAACCGAAATCCCGG+TGG - chr8.3:27750352-27750371 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 27750334 27751567 27750334 ID=MS.gene89643
chr8.3 mRNA 27750334 27751567 27750334 ID=MS.gene89643.t1;Parent=MS.gene89643
chr8.3 exon 27750334 27750487 27750334 ID=MS.gene89643.t1.exon1;Parent=MS.gene89643.t1
chr8.3 CDS 27750334 27750487 27750334 ID=cds.MS.gene89643.t1;Parent=MS.gene89643.t1
chr8.3 exon 27750950 27751246 27750950 ID=MS.gene89643.t1.exon2;Parent=MS.gene89643.t1
chr8.3 CDS 27750950 27751246 27750950 ID=cds.MS.gene89643.t1;Parent=MS.gene89643.t1
chr8.3 exon 27751563 27751567 27751563 ID=MS.gene89643.t1.exon3;Parent=MS.gene89643.t1
chr8.3 CDS 27751563 27751567 27751563 ID=cds.MS.gene89643.t1;Parent=MS.gene89643.t1
Gene Sequence

>MS.gene89643

ATGGAGTCATGTGTCCCACCGGGATTTCGGTTCCACCCAACGGATGGAGAGCTTGTTGGTTATTATCTTAGAAAGAAAGTAGCTTCTCACAAGATTGATCTTGATGTTATCAAAGAGATCGATCTATATCGTATTGAACCCTGGGATCTCCAAGGTATATTACTAAATTTTATACACTACATGTACTATATATTGTTCAAGTTTTAAACCACGTTTAACATAGCGATGGTTGTTGCATCGCAATCTTTGATAATATCGATTATGTTGATGCGTACGCAAATTTAATTGTAGTTACATTATAGTTGCAGACACATCAAAAATATCGATTAAAAAAAGTTGAAATATCAACGGAAATTTATAGACACAAAATTTGTCGAATTATTTTATTTTTTGTCATGTACAATATATTTTTGTTATTTCAAATTTTTCTAGTAGTATATGATATTGTGATCTAGATCACAGTTGCAAATTCTTTTCTAAATCTTGTGTGTGTAGTGTTACTTGATTATCCTATAGAGTAACGCATAAAATACACACTTTGATTAACCCTATTGATTAGGGTTTTAACAGTTAATTTTGTTTTAGCCTATTTTGTGTTCTATATATATGCTGAAAGGATTTAGATCTTTGTATACAGAGAGATGTAGAATTGGGAATGAGGAGCAACATGAGTGGTATTTTTTTAGTCACAAAGATAAAAAATATCCAACAGGGACGAGAACGAATAGAGCTACAATGGCAGGGTTCTGGAAAGCAACGGGAAGAGATAAATCGGTGTATGAACGAACAAAACTGATTGGAATGAGGAAGACACTTGTTTTCTACAAAGGAAGAGCACCTAATGGACAGAAAACTGATTGGATCATGCATGAATATAGGCTTGAAACAGTTGAAAATGCACCTCCACAGGCAAGTATATACATATATTTACATACCATATATTATGTGTTGAGTTTGAGGAGTTGATTAAGTTCAATTTCAAATTTGATTAATATAATTAGTAACTTTAGATATAGGTTCCCCTTGATTAATTAATTAATTAAATATTAGATATTCTAGACACTATATTCTTTTCCTTTTTCAGACAAGAAAACAAGGATGTTTCTATAAGTTGGAGAATGAACACGGTTACTTTCTCTTTTTTTGTTTTGTTGTAGAAGTCTTAATTTTAAAGGGTTTCAACTTCCAAGTATTTCGCTCTCTTGATGTGTCTTTTTCTCATGTTATAGTTTAG
Protein sequence

>MS.gene89643.t1

MESCVPPGFRFHPTDGELVGYYLRKKVASHKIDLDVIKEIDLYRIEPWDLQGFRSLYTERCRIGNEEQHEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKSVYERTKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLETVENAPPQAI