AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene90195

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene90195.t1 MTR_1g098000 88.995 209 14 1 102 301 36 244 2.13e-132 387
MS.gene90195.t1 MTR_1g098370 88.517 209 15 1 102 301 39 247 1.98e-131 385
MS.gene90195.t1 MTR_7g017100 98.000 100 2 0 1 100 2451 2550 1.02e-56 199
MS.gene90195.t1 MTR_3g088625 42.365 203 102 4 103 293 1267 1466 3.79e-45 166
MS.gene90195.t1 MTR_3g088625 42.365 203 102 4 103 293 1161 1360 4.46e-45 166
MS.gene90195.t1 MTR_6g059310 39.024 205 113 4 99 294 52 253 9.98e-36 133
MS.gene90195.t1 MTR_6g059310 39.024 205 113 4 99 294 52 253 1.02e-35 133
MS.gene90195.t1 MTR_0071s0100 30.037 273 162 10 35 296 99 353 7.93e-30 118
MS.gene90195.t1 MTR_2g036060 38.053 113 69 1 174 286 1054 1165 9.89e-19 88.2
MS.gene90195.t1 MTR_2g036060 38.053 113 69 1 174 286 1079 1190 1.00e-18 88.2
MS.gene90195.t1 MTR_8g078490 33.898 177 86 6 138 287 1076 1248 9.30e-18 85.5
MS.gene90195.t1 MTR_5g016870 35.928 167 82 4 121 271 674 831 3.14e-17 83.6
MS.gene90195.t1 MTR_5g018850 32.184 174 93 4 138 287 1330 1502 6.66e-17 82.8
MS.gene90195.t1 MTR_7g055660 42.718 103 57 1 168 270 598 698 3.22e-16 80.5
MS.gene90195.t1 MTR_4g132610 31.250 176 92 5 138 287 870 1042 3.26e-16 80.5
MS.gene90195.t1 MTR_3g091310 38.655 119 69 3 175 290 944 1061 2.25e-15 78.2
MS.gene90195.t1 MTR_3g091310 38.655 119 69 3 175 290 850 967 2.42e-15 77.8
MS.gene90195.t1 MTR_1g012890 37.288 118 69 2 175 287 246 363 2.45e-15 76.6
MS.gene90195.t1 MTR_8g027725 38.655 119 69 3 175 290 830 947 3.74e-15 77.4
MS.gene90195.t1 MTR_8g027725 38.655 119 69 3 175 290 815 932 4.08e-15 77.0
MS.gene90195.t1 MTR_1g008230 38.655 119 69 3 175 290 637 754 5.06e-15 76.6
MS.gene90195.t1 MTR_1g008230 38.655 119 69 3 175 290 915 1032 5.24e-15 77.0
MS.gene90195.t1 MTR_1g012910 36.441 118 70 2 175 287 549 666 6.09e-15 76.6
MS.gene90195.t1 MTR_1g012910 36.441 118 70 2 175 287 386 503 8.20e-15 75.9
MS.gene90195.t1 MTR_7g021365 39.130 115 68 2 174 287 927 1040 9.61e-15 76.3
MS.gene90195.t1 MTR_1g086980 42.574 101 56 1 168 268 688 786 1.02e-14 75.9
MS.gene90195.t1 MTR_1g086980 42.574 101 56 1 168 268 698 796 1.04e-14 75.9
MS.gene90195.t1 MTR_1g086980 42.574 101 56 1 168 268 498 596 1.06e-14 75.9
MS.gene90195.t1 MTR_1g086980 42.574 101 56 1 168 268 678 776 1.08e-14 75.9
MS.gene90195.t1 MTR_1g086980 42.574 101 56 1 168 268 647 745 1.17e-14 75.9
MS.gene90195.t1 MTR_1g086980 42.574 101 56 1 168 268 626 724 1.18e-14 75.9
MS.gene90195.t1 MTR_8g078505 31.395 172 94 5 138 287 364 533 1.63e-14 75.1
MS.gene90195.t1 MTR_7g117355 39.344 122 64 4 175 290 845 962 5.20e-14 73.9
MS.gene90195.t1 MTR_5g013420 32.487 197 86 9 138 290 894 1087 1.82e-13 72.4
MS.gene90195.t1 MTR_1g048950 34.591 159 72 8 152 288 381 529 3.35e-13 70.9
MS.gene90195.t1 MTR_5g013420 32.308 195 85 9 138 288 894 1085 5.97e-13 70.5
MS.gene90195.t1 MTR_4g010830 29.648 199 85 8 138 288 785 976 9.77e-13 70.1
MS.gene90195.t1 MTR_7g109560 38.462 104 62 1 168 271 628 729 3.21e-12 68.2
MS.gene90195.t1 MTR_8g042750 30.348 201 93 8 138 292 489 688 7.32e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene90195.t1 AT1G76710 72.986 211 48 1 101 302 29 239 2.34e-110 331
MS.gene90195.t1 AT1G76710 72.986 211 48 1 101 302 29 239 2.34e-110 331
MS.gene90195.t1 AT1G76710 73.333 210 47 1 101 301 29 238 8.27e-110 330
MS.gene90195.t1 AT1G76710 73.333 210 47 1 101 301 29 238 8.64e-110 330
MS.gene90195.t1 AT1G77300 42.857 203 101 4 103 293 969 1168 2.73e-45 166
MS.gene90195.t1 AT1G77300 42.857 203 101 4 103 293 969 1168 3.71e-45 166
MS.gene90195.t1 AT3G02260 66.337 101 34 0 1 101 2456 2556 9.83e-35 135
MS.gene90195.t1 AT3G02260 66.000 100 34 0 1 100 2449 2548 5.28e-34 134
MS.gene90195.t1 AT3G02260 66.000 100 34 0 1 100 2439 2538 5.38e-34 134
MS.gene90195.t1 AT3G02260 66.000 100 34 0 1 100 2440 2539 5.38e-34 134
MS.gene90195.t1 AT4G30860 30.483 269 148 10 47 296 221 469 1.65e-27 113
MS.gene90195.t1 AT3G59960 37.500 200 93 7 131 304 69 262 9.11e-26 105
MS.gene90195.t1 AT3G59960 37.500 200 93 7 131 304 69 262 9.11e-26 105
MS.gene90195.t1 AT3G59960 37.500 200 93 7 131 304 69 262 9.11e-26 105
MS.gene90195.t1 AT3G59960 37.500 200 93 7 131 304 69 262 1.78e-25 105
MS.gene90195.t1 AT2G44150 37.572 173 85 3 144 294 86 257 1.17e-24 103
MS.gene90195.t1 AT5G42400 41.228 114 66 1 174 287 1271 1383 1.04e-21 97.4
MS.gene90195.t1 AT5G42400 41.228 114 66 1 174 287 1271 1383 1.04e-21 97.4
MS.gene90195.t1 AT5G42400 41.228 114 66 1 174 287 1271 1383 1.04e-21 97.4
MS.gene90195.t1 AT5G42400 41.228 114 66 1 174 287 1271 1383 1.04e-21 97.4
MS.gene90195.t1 AT5G42400 41.228 114 66 1 174 287 1271 1383 1.04e-21 97.4
MS.gene90195.t1 AT5G42400 41.228 114 66 1 174 287 1271 1383 1.04e-21 97.4
MS.gene90195.t1 AT5G42400 41.228 114 66 1 174 287 1271 1383 1.04e-21 97.4
MS.gene90195.t1 AT5G42400 41.228 114 66 1 174 287 1271 1383 1.04e-21 97.4
MS.gene90195.t1 AT1G05830 39.130 115 68 2 174 287 941 1054 1.92e-16 81.3
MS.gene90195.t1 AT1G05830 39.130 115 68 2 174 287 941 1054 1.92e-16 81.3
MS.gene90195.t1 AT1G05830 39.130 115 68 2 174 287 941 1054 1.92e-16 81.3
MS.gene90195.t1 AT1G05830 39.130 115 68 2 174 287 941 1054 1.92e-16 81.3
MS.gene90195.t1 AT2G23380 44.792 96 51 1 176 271 776 869 8.68e-16 79.3
MS.gene90195.t1 AT2G23380 44.792 96 51 1 176 271 549 642 9.31e-16 79.0
MS.gene90195.t1 AT4G27910 39.496 119 68 3 175 290 908 1025 1.25e-15 79.0
MS.gene90195.t1 AT2G31650 39.130 115 68 2 174 287 920 1033 3.27e-15 77.8
MS.gene90195.t1 AT1G02580 31.522 184 100 5 125 294 518 689 3.86e-15 77.0
MS.gene90195.t1 AT4G02020 35.802 162 85 6 121 270 669 823 1.21e-14 75.9
MS.gene90195.t1 AT3G61740 39.669 121 66 4 175 290 862 980 2.08e-14 75.1
MS.gene90195.t1 AT3G61740 39.669 121 66 4 175 290 898 1016 2.12e-14 75.1
MS.gene90195.t1 AT5G53430 37.815 119 70 3 175 290 924 1041 2.68e-13 71.6
MS.gene90195.t1 AT3G03750 32.222 180 93 7 136 287 167 345 1.09e-11 65.9

Find 77 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAAGGCCTCCGGTGAATT+TGG 0.123652 4.2:+19573469 MS.gene90195:CDS
TTCAAATTTAGCAACATTTC+TGG 0.140228 4.2:+19568723 MS.gene90195:CDS
GGTAGATCTATTGAGTAATT+TGG 0.173530 4.2:+19572493 MS.gene90195:CDS
GACCTTGAGTTTCATAAGTA+TGG 0.226901 4.2:-19571394 None:intergenic
CAAGATTTATAAACCATTCC+TGG 0.303845 4.2:+19571567 MS.gene90195:CDS
GTGCATTGTACATAGATTCA+TGG 0.330341 4.2:+19573421 MS.gene90195:intron
GCACTGGAAGATATTCCTAT+TGG 0.334570 4.2:+19571788 MS.gene90195:CDS
GCCCTCCATGTAAAAGATTC+AGG 0.335082 4.2:+19569336 MS.gene90195:CDS
AGACATAACAATGTTGTTCA+TGG 0.337645 4.2:-19569277 None:intergenic
CAAACTGTGAGACAAGAAAA+TGG 0.346413 4.2:+19571732 MS.gene90195:CDS
CCAAATTCACCGGAGGCCTT+TGG 0.359060 4.2:-19573469 None:intergenic
TCTGTGTATCCTGGAGGAAT+AGG 0.362717 4.2:-19573497 None:intergenic
CAAAGGCCTCCGGTGAATTT+GGG 0.365321 4.2:+19573470 MS.gene90195:CDS
TCAAGCTTGGGCAGCTGTGC+AGG 0.403644 4.2:+19573520 MS.gene90195:CDS
CTCAGATGCGTGCCGTTTGT+AGG 0.405033 4.2:+19568683 None:intergenic
CCTGACAGTGCCTGTGGAGA+TGG 0.413253 4.2:+19570451 MS.gene90195:CDS
TTGTTCATGGTTTGAGTGTC+GGG 0.416109 4.2:-19569264 None:intergenic
GCAACATTTCTGGAGACATA+TGG 0.417558 4.2:+19568733 MS.gene90195:CDS
ATCCCACAAGGGCAAAATCC+AGG 0.423349 4.2:-19570508 None:intergenic
TTCTTCAGTAATACAACAGC+AGG 0.454164 4.2:-19569375 None:intergenic
CAGTTTGTCATTGAATACTT+TGG 0.459466 4.2:+19571335 MS.gene90195:CDS
CTGTGTATCCTGGAGGAATA+GGG 0.460092 4.2:-19573496 None:intergenic
TATTCCTATTGGAACTGAAC+TGG 0.465129 4.2:+19571799 MS.gene90195:CDS
TTGAAGTAGTTTACCAGGAA+TGG 0.466171 4.2:-19571580 None:intergenic
CAAGCTTGATCTGTGTATCC+TGG 0.476678 4.2:-19573506 None:intergenic
TATGCCAGTTCAGTTCCAAT+AGG 0.481653 4.2:-19571803 None:intergenic
CGAGAGACTGGAGGCGCCAA+AGG 0.481783 4.2:+19573453 MS.gene90195:CDS
TTATTGTTATGCTGAATGCT+TGG 0.483188 4.2:+19569314 MS.gene90195:CDS
TAAACTGAAGGCCGAGGGTG+GGG 0.484563 4.2:+19571178 MS.gene90195:CDS
ACCTTGAGTTTCATAAGTAT+GGG 0.487157 4.2:-19571393 None:intergenic
CAGGATACACAGATCAAGCT+TGG 0.488685 4.2:+19573507 MS.gene90195:CDS
CTGCAGGCATAAGAAGCAAA+AGG 0.490559 4.2:+19570384 MS.gene90195:intron
TCTATCGATGCAACTAGAAA+AGG 0.490560 4.2:+19571536 MS.gene90195:CDS
CTGACAGTGCCTGTGGAGAT+GGG 0.490971 4.2:+19570452 MS.gene90195:CDS
GTTGTTCATGGTTTGAGTGT+CGG 0.491939 4.2:-19569265 None:intergenic
CCATCTCCACAGGCACTGTC+AGG 0.494885 4.2:-19570451 None:intergenic
TCCAGGGTTGCATTCAGTGC+TGG 0.501130 4.2:-19570491 None:intergenic
AACAAAGTTATTTAAACTGA+AGG 0.512234 4.2:+19571166 MS.gene90195:CDS
CTGGAGGCGCCAAAGGCCTC+CGG 0.514065 4.2:+19573460 MS.gene90195:CDS
TTGGGAGACCCTATTCCTCC+AGG 0.515546 4.2:+19573488 MS.gene90195:CDS
AAGAGTTGGAATATTTGCAC+TGG 0.522066 4.2:+19571772 MS.gene90195:CDS
TGGCAACGAGAACGAGAGAC+TGG 0.522617 4.2:+19573441 MS.gene90195:CDS
AAGCTGTTCAAACTGCTAGC+AGG 0.527660 4.2:+19569418 MS.gene90195:CDS
TTGCAATGCTATCCTACAAA+CGG 0.531754 4.2:-19568695 None:intergenic
AATGGTTTATAAATCTTGCA+AGG 0.536559 4.2:-19571562 None:intergenic
CAGCCAAAAGACCCCACCCT+CGG 0.537785 4.2:-19571189 None:intergenic
ACCAGCACTGAATGCAACCC+TGG 0.543451 4.2:+19570490 MS.gene90195:CDS
ACAAGAAAATGGAATGTCAT+GGG 0.544715 4.2:+19571743 MS.gene90195:CDS
CTCAAATGTTCTGAATTCCA+TGG 0.549154 4.2:+19571881 MS.gene90195:CDS
AGGATACACAGATCAAGCTT+GGG 0.553384 4.2:+19573508 MS.gene90195:CDS
GTTATTTAAACTGAAGGCCG+AGG 0.556676 4.2:+19571172 MS.gene90195:CDS
TGAATGGTTTGGAGGTGCAA+AGG 0.560782 4.2:+19571838 MS.gene90195:CDS
GACAAGAAAATGGAATGTCA+TGG 0.568296 4.2:+19571742 MS.gene90195:CDS
TTAAACTGAAGGCCGAGGGT+GGG 0.569938 4.2:+19571177 MS.gene90195:CDS
TTTAAACTGAAGGCCGAGGG+TGG 0.570392 4.2:+19571176 MS.gene90195:CDS
ATATTGCTATATGTGAATGC+AGG 0.572676 4.2:+19570413 MS.gene90195:CDS
TCCCACAAGGGCAAAATCCA+GGG 0.579516 4.2:-19570507 None:intergenic
GAAATGTTGCTAAATTTGAA+CGG 0.591912 4.2:-19568720 None:intergenic
ATAAGTATGGGATCTGCACA+TGG 0.597203 4.2:-19571381 None:intergenic
ATAGGGTCTCCCAAATTCAC+CGG 0.599623 4.2:-19573479 None:intergenic
GCATAAGAAGCAAAAGGAGG+AGG 0.601781 4.2:+19570390 MS.gene90195:CDS
TGCTGGTGTAGGCTCAGAAG+TGG 0.605022 4.2:+19569194 MS.gene90195:intron
TTCCATGGAGCAAAATCTCG+TGG 0.618418 4.2:+19571896 MS.gene90195:CDS
TTATTTAAACTGAAGGCCGA+GGG 0.622157 4.2:+19571173 MS.gene90195:CDS
TCCCATACTTATGAAACTCA+AGG 0.623281 4.2:+19571392 MS.gene90195:CDS
GCAAAGGTTCGCTGCCTCTG+TGG 0.623435 4.2:+19571854 MS.gene90195:CDS
ATTTAGACACCCATCTCCAC+AGG 0.625505 4.2:-19570461 None:intergenic
TGGTGTAGGCTCAGAAGTGG+TGG 0.631909 4.2:+19569197 MS.gene90195:intron
CAAGAAAATGGAATGTCATG+GGG 0.642373 4.2:+19571744 MS.gene90195:CDS
GATGATCCTGACAGTGCCTG+TGG 0.657570 4.2:+19570445 MS.gene90195:CDS
AACATTTGAGCGCACCACAG+AGG 0.676482 4.2:-19571868 None:intergenic
CAACGAGAACGAGAGACTGG+AGG 0.677162 4.2:+19573444 MS.gene90195:CDS
GGGTCTCCCAAATTCACCGG+AGG 0.692164 4.2:-19573476 None:intergenic
CAGGCATAAGAAGCAAAAGG+AGG 0.695576 4.2:+19570387 MS.gene90195:intron
AAGAAAATGGAATGTCATGG+GGG 0.698806 4.2:+19571745 MS.gene90195:CDS
GCTTGATCTGTGTATCCTGG+AGG 0.701820 4.2:-19573503 None:intergenic
GACACAGGAGAATATGCTCG+AGG 0.731511 4.2:+19572472 MS.gene90195:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATAAAATAAAAATA+GGG + chr4.2:19572801-19572820 MS.gene90195:intron 0.0%
!! TAAAAAAATAAAATAAAAAT+AGG + chr4.2:19572800-19572819 MS.gene90195:intron 0.0%
!!! ATATATTTTTTTGTATAGTA+TGG + chr4.2:19570048-19570067 MS.gene90195:intron 10.0%
!!! CTTAATTTTATCTTATTATA+TGG - chr4.2:19573269-19573288 None:intergenic 10.0%
!!! TAAATTTTGTGTAATATTTA+AGG + chr4.2:19570018-19570037 MS.gene90195:intron 10.0%
!!! TTGGTTTTTTAATTATTTTT+AGG - chr4.2:19569583-19569602 None:intergenic 10.0%
!! AAAAAGATAAGTAAAAAGAA+CGG - chr4.2:19569752-19569771 None:intergenic 15.0%
!! AAAGAAAAATAACCATATTA+AGG - chr4.2:19571255-19571274 None:intergenic 15.0%
!! AAATTAAGGTAATCATATAA+TGG + chr4.2:19571218-19571237 MS.gene90195:intron 15.0%
!! AATTAAGGTAATCATATAAT+GGG + chr4.2:19571219-19571238 MS.gene90195:intron 15.0%
!! ATAATTTCCTTCAAAAAAAA+AGG - chr4.2:19569956-19569975 None:intergenic 15.0%
!! GGTAAATTTCATTTAATATT+AGG - chr4.2:19571614-19571633 None:intergenic 15.0%
!! TAAAAAAACATTAACTATGA+AGG - chr4.2:19572213-19572232 None:intergenic 15.0%
!! TTTGTTTGTTTATTTCATAT+AGG + chr4.2:19571307-19571326 MS.gene90195:intron 15.0%
!!! ACATTTTATTATAATGCTTT+TGG + chr4.2:19572763-19572782 MS.gene90195:intron 15.0%
!!! GTTATGAAAAATAGTTTTAT+TGG + chr4.2:19572164-19572183 MS.gene90195:intron 15.0%
!!! TAAGGTTTATATTTTATTCA+TGG + chr4.2:19569007-19569026 MS.gene90195:intron 15.0%
!! AAAAACATCACATAAAACTA+AGG - chr4.2:19572291-19572310 None:intergenic 20.0%
!! AACAAAGTTATTTAAACTGA+AGG + chr4.2:19571166-19571185 MS.gene90195:CDS 20.0%
!! ATTAAGGTAATCATATAATG+GGG + chr4.2:19571220-19571239 MS.gene90195:intron 20.0%
!! CATTATGATAGTTTATGAAT+CGG - chr4.2:19573174-19573193 None:intergenic 20.0%
!! TCTACTGAAATTTAGTATAA+GGG + chr4.2:19568907-19568926 MS.gene90195:intron 20.0%
!! TTAGTAAGAAAATCATTAGT+AGG - chr4.2:19569608-19569627 None:intergenic 20.0%
!!! AAAAAGTATGCAATGAAAAT+AGG - chr4.2:19570791-19570810 None:intergenic 20.0%
!!! AAAACTATTTTTCATAACAC+CGG - chr4.2:19572162-19572181 None:intergenic 20.0%
!!! AACAGTTTAAAATAACTCAA+AGG - chr4.2:19572404-19572423 None:intergenic 20.0%
!!! ATTTTTAGGAAAAGAGTATT+GGG - chr4.2:19569569-19569588 None:intergenic 20.0%
!!! CATATGACTATAATTTTGAA+TGG + chr4.2:19571822-19571841 MS.gene90195:CDS 20.0%
!!! TATTTTTAGGAAAAGAGTAT+TGG - chr4.2:19569570-19569589 None:intergenic 20.0%
!!! TTATTCTAACTTTGATAATC+AGG + chr4.2:19569465-19569484 MS.gene90195:intron 20.0%
!!! TTTGAGTTATTTTAAACTGT+TGG + chr4.2:19572403-19572422 MS.gene90195:intron 20.0%
! AAATAGGAAGATAACAAAAC+AGG - chr4.2:19571660-19571679 None:intergenic 25.0%
! AATGGTTTATAAATCTTGCA+AGG - chr4.2:19571565-19571584 None:intergenic 25.0%
! ACATTAAGATTTCTCAAGAA+TGG - chr4.2:19570331-19570350 None:intergenic 25.0%
! AGAAAATCATTAGTAGGTAT+TGG - chr4.2:19569602-19569621 None:intergenic 25.0%
! CAATAAATAATTGCATGCAA+AGG - chr4.2:19568835-19568854 None:intergenic 25.0%
! CATAATTCATACTATCTGAA+GGG + chr4.2:19573136-19573155 MS.gene90195:intron 25.0%
! CGATTCATAAACTATCATAA+TGG + chr4.2:19573172-19573191 MS.gene90195:intron 25.0%
! CTCTACTGAAATTTAGTATA+AGG + chr4.2:19568906-19568925 MS.gene90195:intron 25.0%
! CTTATACTAAATTTCAGTAG+AGG - chr4.2:19568908-19568927 None:intergenic 25.0%
! GAAAACGAGAATATTTCTTT+AGG - chr4.2:19571067-19571086 None:intergenic 25.0%
! GAAATGTTGCTAAATTTGAA+CGG - chr4.2:19568723-19568742 None:intergenic 25.0%
! TATAGATAATGACATCTCAT+TGG + chr4.2:19573290-19573309 MS.gene90195:intron 25.0%
! TTATAACTTAGAAGGCTATT+GGG + chr4.2:19569497-19569516 MS.gene90195:intron 25.0%
! TTCAAATTTAGCAACATTTC+TGG + chr4.2:19568723-19568742 MS.gene90195:CDS 25.0%
! TTTGTTTATTTCATATAGGC+AGG + chr4.2:19571311-19571330 MS.gene90195:intron 25.0%
!! AAAATAAGTGCTATTAAAGG+GGG + chr4.2:19573081-19573100 MS.gene90195:intron 25.0%
!! ATCATATAATGGGGAAATTT+AGG + chr4.2:19571229-19571248 MS.gene90195:intron 25.0%
!! ATCTGAAGTAAAGTTTAAGT+AGG - chr4.2:19570825-19570844 None:intergenic 25.0%
!! CAAAATAAGTGCTATTAAAG+GGG + chr4.2:19573080-19573099 MS.gene90195:intron 25.0%
!! CCAAAATAAGTGCTATTAAA+GGG + chr4.2:19573079-19573098 MS.gene90195:intron 25.0%
!! GACTATAATTTTGAATGGTT+TGG + chr4.2:19571827-19571846 MS.gene90195:CDS 25.0%
!! GTTTATATTTTATTCATGGC+TGG + chr4.2:19569011-19569030 MS.gene90195:intron 25.0%
!! TCTTTTTGTATACTGCTTAT+TGG + chr4.2:19569046-19569065 MS.gene90195:intron 25.0%
!!! ACGTAAACCTTTTTTTTTGA+AGG + chr4.2:19569946-19569965 MS.gene90195:intron 25.0%
!!! ACTTTGATAATCAGGTTTTT+TGG + chr4.2:19569473-19569492 MS.gene90195:intron 25.0%
!!! ATTGTAATTTTAAGTGACTG+AGG + chr4.2:19569072-19569091 MS.gene90195:intron 25.0%
!!! CTAGTGTTTATTTCTATCAA+TGG + chr4.2:19572696-19572715 MS.gene90195:intron 25.0%
!!! CTTTGATAATCAGGTTTTTT+GGG + chr4.2:19569474-19569493 MS.gene90195:intron 25.0%
!!! GAGATTCTTTTGATTTTAAG+TGG + chr4.2:19572357-19572376 MS.gene90195:intron 25.0%
!!! TATAATTTTGAATGGTTTGG+AGG + chr4.2:19571830-19571849 MS.gene90195:CDS 25.0%
!!! TCAAGCGTTTTAACATTTAT+AGG - chr4.2:19571956-19571975 None:intergenic 25.0%
!!! TTTGGTGTTTTTTTTTTGTG+TGG + chr4.2:19572542-19572561 MS.gene90195:intron 25.0%
!!! TTTTTGGGTTATAACTTAGA+AGG + chr4.2:19569489-19569508 MS.gene90195:intron 25.0%
AAAAAACACCAAACATTGAG+AGG - chr4.2:19572535-19572554 None:intergenic 30.0%
ACAAGAAAATGGAATGTCAT+GGG + chr4.2:19571743-19571762 MS.gene90195:CDS 30.0%
ACCTTGAGTTTCATAAGTAT+GGG - chr4.2:19571396-19571415 None:intergenic 30.0%
ACTTGTAGAACAAAATAACC+AGG - chr4.2:19570724-19570743 None:intergenic 30.0%
AGACATAACAATGTTGTTCA+TGG - chr4.2:19569280-19569299 None:intergenic 30.0%
ATATTGCTATATGTGAATGC+AGG + chr4.2:19570413-19570432 MS.gene90195:CDS 30.0%
ATGATTTAAACTACCTTTGC+TGG + chr4.2:19569177-19569196 MS.gene90195:intron 30.0%
ATTCTTACAGCAGATATGAA+CGG - chr4.2:19568980-19568999 None:intergenic 30.0%
CAAATAAATAGATGAGCGTA+TGG - chr4.2:19571291-19571310 None:intergenic 30.0%
CAAGATTTATAAACCATTCC+TGG + chr4.2:19571567-19571586 MS.gene90195:CDS 30.0%
CAATACAATCAAATGCATAG+TGG - chr4.2:19572322-19572341 None:intergenic 30.0%
CAGTTTGTCATTGAATACTT+TGG + chr4.2:19571335-19571354 MS.gene90195:CDS 30.0%
CTTGTAGAACAAAATAACCA+GGG - chr4.2:19570723-19570742 None:intergenic 30.0%
GAAATTATACGTAACACTTG+TGG + chr4.2:19569968-19569987 MS.gene90195:intron 30.0%
GATTTATGTATGTGCTTGAA+TGG + chr4.2:19573241-19573260 MS.gene90195:intron 30.0%
GCATAATTCATACTATCTGA+AGG + chr4.2:19573135-19573154 MS.gene90195:intron 30.0%
GCTATAGATATCATTGCAAT+CGG + chr4.2:19571019-19571038 MS.gene90195:intron 30.0%
GGTAGATCTATTGAGTAATT+TGG + chr4.2:19572493-19572512 MS.gene90195:CDS 30.0%
GTGTACATTAGATCTCATTT+AGG + chr4.2:19572623-19572642 MS.gene90195:intron 30.0%
GTTATAACTTAGAAGGCTAT+TGG + chr4.2:19569496-19569515 MS.gene90195:intron 30.0%
TAAAAATAGCACCTAAACTG+AGG + chr4.2:19572928-19572947 MS.gene90195:intron 30.0%
TAAAACCATAGTTGTCAAAG+CGG - chr4.2:19570181-19570200 None:intergenic 30.0%
TGCATAAAAATGAAAGTTCG+TGG - chr4.2:19572602-19572621 None:intergenic 30.0%
TGTAAAACGCTAAGAAACAT+CGG + chr4.2:19572842-19572861 MS.gene90195:intron 30.0%
TTATTGTTATGCTGAATGCT+TGG + chr4.2:19569314-19569333 MS.gene90195:CDS 30.0%
TTCATATCTGCTGTAAGAAT+GGG + chr4.2:19568980-19568999 MS.gene90195:intron 30.0%
TTCTAGTCAGTTAACTTAAC+TGG + chr4.2:19570910-19570929 MS.gene90195:intron 30.0%
! AACTCACCTGATTTTTACAA+AGG - chr4.2:19570534-19570553 None:intergenic 30.0%
! AACTTTTCTTCTAAGTAGTG+CGG + chr4.2:19570997-19571016 MS.gene90195:intron 30.0%
! ATGCACTAATGCAAGTTTTA+TGG + chr4.2:19569220-19569239 MS.gene90195:CDS 30.0%
! ATTTTGTAGTAGTAGTTGCT+GGG + chr4.2:19573105-19573124 MS.gene90195:intron 30.0%
! CCCTTTAATAGCACTTATTT+TGG - chr4.2:19573082-19573101 None:intergenic 30.0%
! GCCAAAATAAGTGCTATTAA+AGG + chr4.2:19573078-19573097 MS.gene90195:intron 30.0%
! TATTTTGTAGTAGTAGTTGC+TGG + chr4.2:19573104-19573123 MS.gene90195:intron 30.0%
! TTTGTTTGAAGTAGTTTACC+AGG - chr4.2:19571588-19571607 None:intergenic 30.0%
!! AAACTTTTGTTTGCTTTTGC+AGG + chr4.2:19571473-19571492 MS.gene90195:intron 30.0%
!! TGCACTAATGCAAGTTTTAT+GGG + chr4.2:19569221-19569240 MS.gene90195:CDS 30.0%
!!! GTTTTTTTTTTGTGTGGTTG+TGG + chr4.2:19572548-19572567 MS.gene90195:intron 30.0%
AAGAAAATGGAATGTCATGG+GGG + chr4.2:19571745-19571764 MS.gene90195:CDS 35.0%
AAGAGTTGGAATATTTGCAC+TGG + chr4.2:19571772-19571791 MS.gene90195:CDS 35.0%
CAAAAAAAAGGTTCGAACCT+CGG + chr4.2:19572115-19572134 MS.gene90195:intron 35.0%
CAAACTGTGAGACAAGAAAA+TGG + chr4.2:19571732-19571751 MS.gene90195:CDS 35.0%
CAAGAAAATGGAATGTCATG+GGG + chr4.2:19571744-19571763 MS.gene90195:CDS 35.0%
CCTCAGATACCACAAAAAAA+AGG + chr4.2:19572103-19572122 MS.gene90195:intron 35.0%
GACAAGAAAATGGAATGTCA+TGG + chr4.2:19571742-19571761 MS.gene90195:CDS 35.0%
GACCTTGAGTTTCATAAGTA+TGG - chr4.2:19571397-19571416 None:intergenic 35.0%
GGGAAATTTAGGCCTTAATA+TGG + chr4.2:19571240-19571259 MS.gene90195:intron 35.0%
GGTCTACAATACTTGCATAT+TGG - chr4.2:19571639-19571658 None:intergenic 35.0%
GTGCATTGTACATAGATTCA+TGG + chr4.2:19573421-19573440 MS.gene90195:intron 35.0%
GTTCATATCTGCTGTAAGAA+TGG + chr4.2:19568979-19568998 MS.gene90195:intron 35.0%
TACAATACTTGCATATTGGC+AGG - chr4.2:19571635-19571654 None:intergenic 35.0%
TAGCAGTCTGTAGTTACAAT+CGG + chr4.2:19570963-19570982 MS.gene90195:intron 35.0%
TATTCCTATTGGAACTGAAC+TGG + chr4.2:19571799-19571818 MS.gene90195:CDS 35.0%
TATTTGTATTCTGCTTTCCC+TGG + chr4.2:19570703-19570722 MS.gene90195:intron 35.0%
TCCCATACTTATGAAACTCA+AGG + chr4.2:19571392-19571411 MS.gene90195:CDS 35.0%
TCTATCGATGCAACTAGAAA+AGG + chr4.2:19571536-19571555 MS.gene90195:CDS 35.0%
TGGGATCCTTTGTAAAAATC+AGG + chr4.2:19570525-19570544 MS.gene90195:CDS 35.0%
TGTTGCAAGTATAACCACAT+TGG - chr4.2:19569149-19569168 None:intergenic 35.0%
TTATTTAAACTGAAGGCCGA+GGG + chr4.2:19571173-19571192 MS.gene90195:CDS 35.0%
TTCTTCAGTAATACAACAGC+AGG - chr4.2:19569378-19569397 None:intergenic 35.0%
TTGAAGTAGTTTACCAGGAA+TGG - chr4.2:19571583-19571602 None:intergenic 35.0%
TTGCAATGCTATCCTACAAA+CGG - chr4.2:19568698-19568717 None:intergenic 35.0%
TTTGGCTGATGAGGAAATTA+AGG + chr4.2:19571204-19571223 MS.gene90195:intron 35.0%
! AGTTAAGCCTTTTCAATGCA+TGG + chr4.2:19572002-19572021 MS.gene90195:intron 35.0%
! ATTTTTCATAACACCGGCAT+TGG - chr4.2:19572156-19572175 None:intergenic 35.0%
! CATTTTCTTGTCTCACAGTT+TGG - chr4.2:19571734-19571753 None:intergenic 35.0%
! CTCAAATGTTCTGAATTCCA+TGG + chr4.2:19571881-19571900 MS.gene90195:CDS 35.0%
! GTTAAGCCTTTTCAATGCAT+GGG + chr4.2:19572003-19572022 MS.gene90195:intron 35.0%
! TAGTGGGTCTTAAAAACTCA+TGG - chr4.2:19572050-19572069 None:intergenic 35.0%
! TCCTGAATCTTTTACATGGA+GGG - chr4.2:19569340-19569359 None:intergenic 35.0%
! TTTTACAAAGGATCCCACAA+GGG - chr4.2:19570522-19570541 None:intergenic 35.0%
! TTTTTACAAAGGATCCCACA+AGG - chr4.2:19570523-19570542 None:intergenic 35.0%
! TTTTTCATTCCATACGACAC+AGG + chr4.2:19572457-19572476 MS.gene90195:intron 35.0%
!! ATTGATTTGTTCTCGCTGAT+TGG + chr4.2:19568757-19568776 MS.gene90195:intron 35.0%
!! GCAAGTTTTATGGGGAATTT+TGG + chr4.2:19569230-19569249 MS.gene90195:CDS 35.0%
!! GCACTAATGCAAGTTTTATG+GGG + chr4.2:19569222-19569241 MS.gene90195:CDS 35.0%
!! TTTTAAACTGTTGGCTATGC+TGG + chr4.2:19572412-19572431 MS.gene90195:intron 35.0%
!!! AGGTTCGAACCTTTTTTTTG+TGG - chr4.2:19572115-19572134 None:intergenic 35.0%
!!! CCTTTTTTTTGTGGTATCTG+AGG - chr4.2:19572106-19572125 None:intergenic 35.0%
AAACATGTAAAGATGGGGCA+TGG + chr4.2:19569522-19569541 MS.gene90195:intron 40.0%
AAATCAGGTGAGTTCGTGTT+TGG + chr4.2:19570540-19570559 MS.gene90195:intron 40.0%
AACATGTAAAGATGGGGCAT+GGG + chr4.2:19569523-19569542 MS.gene90195:intron 40.0%
AATCAGGTGAGTTCGTGTTT+GGG + chr4.2:19570541-19570560 MS.gene90195:intron 40.0%
AATGACATCTCATTGGACTG+TGG + chr4.2:19573297-19573316 MS.gene90195:intron 40.0%
ACTTCTCTTTATCTCTCTGC+AGG + chr4.2:19570368-19570387 MS.gene90195:intron 40.0%
AGACCCACTAATAGCTTGAA+CGG + chr4.2:19572060-19572079 MS.gene90195:intron 40.0%
AGGATACACAGATCAAGCTT+GGG + chr4.2:19573508-19573527 MS.gene90195:CDS 40.0%
AGTCCGTTCAAGCTATTAGT+GGG - chr4.2:19572066-19572085 None:intergenic 40.0%
ATAAGTATGGGATCTGCACA+TGG - chr4.2:19571384-19571403 None:intergenic 40.0%
ATCATGCCCATGCATTGAAA+AGG - chr4.2:19572012-19572031 None:intergenic 40.0%
ATGCCCCATCTTTACATGTT+TGG - chr4.2:19569523-19569542 None:intergenic 40.0%
ATTTCTGCAAGCATGAGACA+TGG - chr4.2:19571124-19571143 None:intergenic 40.0%
CCTGCAGGTAGTTAAAAAGT+TGG + chr4.2:19570607-19570626 MS.gene90195:intron 40.0%
CGCTAATAAAGCCTCAGTTT+AGG - chr4.2:19572942-19572961 None:intergenic 40.0%
GCACTGGAAGATATTCCTAT+TGG + chr4.2:19571788-19571807 MS.gene90195:CDS 40.0%
GTTATTTAAACTGAAGGCCG+AGG + chr4.2:19571172-19571191 MS.gene90195:CDS 40.0%
GTTGTTCATGGTTTGAGTGT+CGG - chr4.2:19569268-19569287 None:intergenic 40.0%
TAAACTACCTTTGCTGGTGT+AGG + chr4.2:19569183-19569202 MS.gene90195:intron 40.0%
TATGCCAGTTCAGTTCCAAT+AGG - chr4.2:19571806-19571825 None:intergenic 40.0%
TGGGCCAAACATGTAAAGAT+GGG + chr4.2:19569516-19569535 MS.gene90195:intron 40.0%
TTGAAGTCATCTGTCCAATG+TGG + chr4.2:19569132-19569151 MS.gene90195:intron 40.0%
TTGCATTATAACCATCCTGC+AGG + chr4.2:19570592-19570611 MS.gene90195:intron 40.0%
TTGGGCCAAACATGTAAAGA+TGG + chr4.2:19569515-19569534 MS.gene90195:intron 40.0%
TTGTTCATGGTTTGAGTGTC+GGG - chr4.2:19569267-19569286 None:intergenic 40.0%
! ATTCAGTTGATGTCAAGCCT+TGG - chr4.2:19571691-19571710 None:intergenic 40.0%
! CTCCTGAATCTTTTACATGG+AGG - chr4.2:19569341-19569360 None:intergenic 40.0%
! GCAACATTTCTGGAGACATA+TGG + chr4.2:19568733-19568752 MS.gene90195:CDS 40.0%
! GCACTCCTGAATCTTTTACA+TGG - chr4.2:19569344-19569363 None:intergenic 40.0%
! GCTGTAAGAATGGGTTTCTA+AGG + chr4.2:19568989-19569008 MS.gene90195:intron 40.0%
! TTCAGTTGATGTCAAGCCTT+GGG - chr4.2:19571690-19571709 None:intergenic 40.0%
!! CCAACTTTTTAACTACCTGC+AGG - chr4.2:19570610-19570629 None:intergenic 40.0%
!! CGTTTCGAAAGCGCTATTAT+AGG + chr4.2:19573001-19573020 MS.gene90195:intron 40.0%
!! CTTTTTAACTACCTGCAGGA+TGG - chr4.2:19570606-19570625 None:intergenic 40.0%
!! GCTTTAACTTGTGTCTCTGA+AGG + chr4.2:19570659-19570678 MS.gene90195:intron 40.0%
!! GTTTGCTTTTGCAGGTCTTA+AGG + chr4.2:19571481-19571500 MS.gene90195:intron 40.0%
!! TAAAGGAGTGTTACCAATGC+CGG + chr4.2:19572140-19572159 MS.gene90195:intron 40.0%
!!! TTTTTTGAGATGCGAGTTGC+AGG + chr4.2:19569883-19569902 MS.gene90195:intron 40.0%
AAGAAAGCCCCCGCTATAAA+AGG - chr4.2:19573034-19573053 None:intergenic 45.0%
AAGCTGTTCAAACTGCTAGC+AGG + chr4.2:19569418-19569437 MS.gene90195:CDS 45.0%
ACATCTCATTGGACTGTGGT+TGG + chr4.2:19573301-19573320 MS.gene90195:intron 45.0%
ATAGGGTCTCCCAAATTCAC+CGG - chr4.2:19573482-19573501 None:intergenic 45.0%
ATTTAGACACCCATCTCCAC+AGG - chr4.2:19570464-19570483 None:intergenic 45.0%
CAAGCTTGATCTGTGTATCC+TGG - chr4.2:19573509-19573528 None:intergenic 45.0%
CAGGATACACAGATCAAGCT+TGG + chr4.2:19573507-19573526 MS.gene90195:CDS 45.0%
CAGGCATAAGAAGCAAAAGG+AGG + chr4.2:19570387-19570406 MS.gene90195:intron 45.0%
CGTTTCCGCTTTGACAACTA+TGG + chr4.2:19570173-19570192 MS.gene90195:intron 45.0%
CTGCAGGCATAAGAAGCAAA+AGG + chr4.2:19570384-19570403 MS.gene90195:intron 45.0%
CTGTGTATCCTGGAGGAATA+GGG - chr4.2:19573499-19573518 None:intergenic 45.0%
GAGTCCGTTCAAGCTATTAG+TGG - chr4.2:19572067-19572086 None:intergenic 45.0%
GCATAAGAAGCAAAAGGAGG+AGG + chr4.2:19570390-19570409 MS.gene90195:CDS 45.0%
GCATATTCTCCTGTGTCGTA+TGG - chr4.2:19572469-19572488 None:intergenic 45.0%
GCCCTCCATGTAAAAGATTC+AGG + chr4.2:19569336-19569355 MS.gene90195:CDS 45.0%
GGGCCAAACATGTAAAGATG+GGG + chr4.2:19569517-19569536 MS.gene90195:intron 45.0%
GTCATGGGGGAAATAAGAGT+TGG + chr4.2:19571758-19571777 MS.gene90195:CDS 45.0%
TAGTTGTCAAAGCGGAAACG+CGG - chr4.2:19570173-19570192 None:intergenic 45.0%
TCACGAGTCCTCTCAATGTT+TGG + chr4.2:19572524-19572543 MS.gene90195:intron 45.0%
TCTGTGTATCCTGGAGGAAT+AGG - chr4.2:19573500-19573519 None:intergenic 45.0%
TTCCATGGAGCAAAATCTCG+TGG + chr4.2:19571896-19571915 MS.gene90195:CDS 45.0%
! AACCACGAGATTTTGCTCCA+TGG - chr4.2:19571901-19571920 None:intergenic 45.0%
! AGGCTCCTGACCTTTTATAG+CGG + chr4.2:19573021-19573040 MS.gene90195:intron 45.0%
! CTAATAGCTTGAACGGACTC+AGG + chr4.2:19572067-19572086 MS.gene90195:intron 45.0%
! TGAATGGTTTGGAGGTGCAA+AGG + chr4.2:19571838-19571857 MS.gene90195:CDS 45.0%
AACATTTGAGCGCACCACAG+AGG - chr4.2:19571871-19571890 None:intergenic 50.0%
AGGTTCGAACCTCGGAGTAA+AGG + chr4.2:19572123-19572142 MS.gene90195:intron 50.0%
ATCCCACAAGGGCAAAATCC+AGG - chr4.2:19570511-19570530 None:intergenic 50.0%
CAAAGGCCTCCGGTGAATTT+GGG + chr4.2:19573470-19573489 MS.gene90195:CDS 50.0%
GACAAGAGCTGTGTCTTCAG+AGG + chr4.2:19570277-19570296 MS.gene90195:intron 50.0%
GACACAGGAGAATATGCTCG+AGG + chr4.2:19572472-19572491 MS.gene90195:intron 50.0%
GAGCTGTGTCTTCAGAGGAA+TGG + chr4.2:19570282-19570301 MS.gene90195:intron 50.0%
GCTTGATCTGTGTATCCTGG+AGG - chr4.2:19573506-19573525 None:intergenic 50.0%
GGTAACACTCCTTTACTCCG+AGG - chr4.2:19572135-19572154 None:intergenic 50.0%
TCCCACAAGGGCAAAATCCA+GGG - chr4.2:19570510-19570529 None:intergenic 50.0%
TGCCTGTTGTGTATGACGCA+GGG + chr4.2:19570243-19570262 MS.gene90195:intron 50.0%
TGCGTCATACACAACAGGCA+AGG - chr4.2:19570243-19570262 None:intergenic 50.0%
TTAAACTGAAGGCCGAGGGT+GGG + chr4.2:19571177-19571196 MS.gene90195:CDS 50.0%
TTCCTATTTCCCACTGCCCA+AGG + chr4.2:19571671-19571690 MS.gene90195:intron 50.0%
TTCTGAGCCTACACCAGCAA+AGG - chr4.2:19569193-19569212 None:intergenic 50.0%
TTGCCTGTTGTGTATGACGC+AGG + chr4.2:19570242-19570261 MS.gene90195:intron 50.0%
TTTAAACTGAAGGCCGAGGG+TGG + chr4.2:19571176-19571195 MS.gene90195:CDS 50.0%
! AACCCTGGATTTTGCCCTTG+TGG + chr4.2:19570505-19570524 MS.gene90195:CDS 50.0%
! ACCCTGGATTTTGCCCTTGT+GGG + chr4.2:19570506-19570525 MS.gene90195:CDS 50.0%
! ACTGCGCCGCGTCAATTTTT+GGG + chr4.2:19570133-19570152 MS.gene90195:intron 50.0%
! CTCCTGACCTTTTATAGCGG+GGG + chr4.2:19573024-19573043 MS.gene90195:intron 50.0%
! GCTCCTGACCTTTTATAGCG+GGG + chr4.2:19573023-19573042 MS.gene90195:intron 50.0%
! GGCTCCTGACCTTTTATAGC+GGG + chr4.2:19573022-19573041 MS.gene90195:intron 50.0%
! TACTGCGCCGCGTCAATTTT+TGG + chr4.2:19570132-19570151 MS.gene90195:intron 50.0%
AATTGACGCGGCGCAGTATG+CGG - chr4.2:19570130-19570149 None:intergenic 55.0%
AGCCCCCGCTATAAAAGGTC+AGG - chr4.2:19573029-19573048 None:intergenic 55.0%
AGCCTTGGGCAGTGGGAAAT+AGG - chr4.2:19571676-19571695 None:intergenic 55.0%
CAACGAGAACGAGAGACTGG+AGG + chr4.2:19573444-19573463 MS.gene90195:CDS 55.0%
CCAAAGGCCTCCGGTGAATT+TGG + chr4.2:19573469-19573488 MS.gene90195:CDS 55.0%
CCAAATTCACCGGAGGCCTT+TGG - chr4.2:19573472-19573491 None:intergenic 55.0%
CTGACAGTGCCTGTGGAGAT+GGG + chr4.2:19570452-19570471 MS.gene90195:CDS 55.0%
GATGATCCTGACAGTGCCTG+TGG + chr4.2:19570445-19570464 MS.gene90195:CDS 55.0%
GATGTCAAGCCTTGGGCAGT+GGG - chr4.2:19571683-19571702 None:intergenic 55.0%
GCCTGTTGTGTATGACGCAG+GGG + chr4.2:19570244-19570263 MS.gene90195:intron 55.0%
GGCCACCCCAAAAATTGACG+CGG - chr4.2:19570142-19570161 None:intergenic 55.0%
TAAACTGAAGGCCGAGGGTG+GGG + chr4.2:19571178-19571197 MS.gene90195:CDS 55.0%
TCCAGGGTTGCATTCAGTGC+TGG - chr4.2:19570494-19570513 None:intergenic 55.0%
TGATGTCAAGCCTTGGGCAG+TGG - chr4.2:19571684-19571703 None:intergenic 55.0%
TGCTGGTGTAGGCTCAGAAG+TGG + chr4.2:19569194-19569213 MS.gene90195:intron 55.0%
TGGCAACGAGAACGAGAGAC+TGG + chr4.2:19573441-19573460 MS.gene90195:CDS 55.0%
TGGTGTAGGCTCAGAAGTGG+TGG + chr4.2:19569197-19569216 MS.gene90195:intron 55.0%
TTGGGAGACCCTATTCCTCC+AGG + chr4.2:19573488-19573507 MS.gene90195:CDS 55.0%
TTGTGTATGACGCAGGGGCT+AGG + chr4.2:19570249-19570268 MS.gene90195:intron 55.0%
! ACCAGCACTGAATGCAACCC+TGG + chr4.2:19570490-19570509 MS.gene90195:CDS 55.0%
! CTGCGCCGCGTCAATTTTTG+GGG + chr4.2:19570134-19570153 MS.gene90195:intron 55.0%
! CTTGAACGGACTCAGGTCTG+AGG + chr4.2:19572074-19572093 MS.gene90195:intron 55.0%
!! GTGGGGTCTTTTGGCTGATG+AGG + chr4.2:19571195-19571214 MS.gene90195:intron 55.0%
ATTGACGCGGCGCAGTATGC+GGG - chr4.2:19570129-19570148 None:intergenic 60.0%
CAGCCAAAAGACCCCACCCT+CGG - chr4.2:19571192-19571211 None:intergenic 60.0%
CCTGACAGTGCCTGTGGAGA+TGG + chr4.2:19570451-19570470 MS.gene90195:CDS 60.0%
GCAAAGGTTCGCTGCCTCTG+TGG + chr4.2:19571854-19571873 MS.gene90195:CDS 60.0%
GCCCCTGCGTCATACACAAC+AGG - chr4.2:19570248-19570267 None:intergenic 60.0%
GCGGGCGCTATTACATGACG+CGG - chr4.2:19570100-19570119 None:intergenic 60.0%
GGGTCTCCCAAATTCACCGG+AGG - chr4.2:19573479-19573498 None:intergenic 60.0%
TCAAGCTTGGGCAGCTGTGC+AGG + chr4.2:19573520-19573539 MS.gene90195:CDS 60.0%
! CCATCTCCACAGGCACTGTC+AGG - chr4.2:19570454-19570473 None:intergenic 60.0%
!! CGCCGCGTCAATTTTTGGGG+TGG + chr4.2:19570137-19570156 MS.gene90195:intron 60.0%
GTCAAAGCGGAAACGCGGCG+CGG - chr4.2:19570168-19570187 None:intergenic 65.0%
! AGGCCGAGGGTGGGGTCTTT+TGG + chr4.2:19571186-19571205 MS.gene90195:intron 65.0%
!! CGAGAGACTGGAGGCGCCAA+AGG + chr4.2:19573453-19573472 MS.gene90195:CDS 65.0%
!! CTGGAGGCGCCAAAGGCCTC+CGG + chr4.2:19573460-19573479 MS.gene90195:CDS 70.0%
CGCAGTATGCGGGCGCGACG+CGG - chr4.2:19570119-19570138 None:intergenic 75.0%
GCAGTATGCGGGCGCGACGC+GGG - chr4.2:19570118-19570137 None:intergenic 75.0%
! AGCGGAAACGCGGCGCGGCG+CGG - chr4.2:19570163-19570182 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 19568688 19573550 19568688 ID=MS.gene90195
chr4.2 mRNA 19568688 19573550 19568688 ID=MS.gene90195.t1;Parent=MS.gene90195
chr4.2 exon 19568688 19568754 19568688 ID=MS.gene90195.t1.exon1;Parent=MS.gene90195.t1
chr4.2 CDS 19568688 19568754 19568688 ID=cds.MS.gene90195.t1;Parent=MS.gene90195.t1
chr4.2 exon 19569205 19569439 19569205 ID=MS.gene90195.t1.exon2;Parent=MS.gene90195.t1
chr4.2 CDS 19569205 19569439 19569205 ID=cds.MS.gene90195.t1;Parent=MS.gene90195.t1
chr4.2 exon 19570390 19570546 19570390 ID=MS.gene90195.t1.exon3;Parent=MS.gene90195.t1
chr4.2 CDS 19570390 19570546 19570390 ID=cds.MS.gene90195.t1;Parent=MS.gene90195.t1
chr4.2 exon 19571140 19571199 19571140 ID=MS.gene90195.t1.exon4;Parent=MS.gene90195.t1
chr4.2 CDS 19571140 19571199 19571140 ID=cds.MS.gene90195.t1;Parent=MS.gene90195.t1
chr4.2 exon 19571329 19571413 19571329 ID=MS.gene90195.t1.exon5;Parent=MS.gene90195.t1
chr4.2 CDS 19571329 19571413 19571329 ID=cds.MS.gene90195.t1;Parent=MS.gene90195.t1
chr4.2 exon 19571495 19571588 19571495 ID=MS.gene90195.t1.exon6;Parent=MS.gene90195.t1
chr4.2 CDS 19571495 19571588 19571495 ID=cds.MS.gene90195.t1;Parent=MS.gene90195.t1
chr4.2 exon 19571727 19571925 19571727 ID=MS.gene90195.t1.exon7;Parent=MS.gene90195.t1
chr4.2 CDS 19571727 19571925 19571727 ID=cds.MS.gene90195.t1;Parent=MS.gene90195.t1
chr4.2 exon 19572479 19572540 19572479 ID=MS.gene90195.t1.exon8;Parent=MS.gene90195.t1
chr4.2 CDS 19572479 19572540 19572479 ID=cds.MS.gene90195.t1;Parent=MS.gene90195.t1
chr4.2 exon 19573436 19573550 19573436 ID=MS.gene90195.t1.exon9;Parent=MS.gene90195.t1
chr4.2 CDS 19573436 19573550 19573436 ID=cds.MS.gene90195.t1;Parent=MS.gene90195.t1
Gene Sequence

>MS.gene90195

ATGCGTGCCGTTTGTAGGATAGCATTGCAACACCGTTCAAATTTAGCAACATTTCTGGAGACATATGGTATTGATTTGTTCTCGCTGATTGGATCTTAAATATATAAATGATAAGTACACACACAGTTAGTAAATTTAAACAATCCTTTGCATGCAATTATTTATTGAGATGCTTTTCTATTTCTTTATGTAGTAATTTTGTGAAATTTAGTATTCTCCTCTACTGAAATTTAGTATAAGGGTCTAAACTAAACTTCAACAGTTTGAAATTTCTGAGTTGATATCTGCACCGTTCATATCTGCTGTAAGAATGGGTTTCTAAGGTTTATATTTTATTCATGGCTGGTTTTTACTACATTCTTTTTGTATACTGCTTATTGGATTATTGTAATTTTAAGTGACTGAGGTACTGTTATTATGAATCAAGAATAGAGTGAATAAATATTGAAGTCATCTGTCCAATGTGGTTATACTTGCAACACATTTTACATGATTTAAACTACCTTTGCTGGTGTAGGCTCAGAAGTGGTGGATGCACTAATGCAAGTTTTATGGGGAATTTTGGACTTTGAGCAGCCCGACACTCAAACCATGAACAACATTGTTATGTCTGCAGTTGAACTTATTTATTGTTATGCTGAATGCTTGGCCCTCCATGTAAAAGATTCAGGAGTGCACTGTGTAGCACCTGCTGTTGTATTACTGAAGAAACTTCTTTTTTCGTCTGATGAAGCTGTTCAAACTGCTAGCAGGTGTGTTTTCTCACTATTATTTTTTTTATTCTAACTTTGATAATCAGGTTTTTTGGGTTATAACTTAGAAGGCTATTGGGCCAAACATGTAAAGATGGGGCATGGGTCATATAAAGTTTCAAATAACCCAATACTCTTTTCCTAAAAATAATTAAAAAACCAATACCTACTAATGATTTTCTTACTAATGATACATATTAAATATTTTAACTCTTTTTTTTATAATAAATGTACATATTATTTATTTAATGTTTCTTTTTACAAGATTATTTATTTAATGTTGAAATATTTTAATGCATGTATTAAATACCGTTCTTTTTACTTATCTTTTTACTTAATATTAAATATATACTACTTATCTTTTTTACTTAATATTAAATATATTACTTAATATACAACTTTTATTATTATTATTATTATTATTATCATCATCATCACAGTTCTTTTTTGAGATGCGAGTTGCAGGTGATATATTTCAAAAATTGCAGTTTTTTTTATTCAATTATACGTAAACCTTTTTTTTTGAAGGAAATTATACGTAACACTTGTGGCTTTTATTTCAAATTATGAATAATTCATAAATTTTGTGTAATATTTAAGGTATTTTAATATATTTTTTTGTATAGTATGGTGTTTTAATATTAAATATATTAGTGTCCGCGTCATGTAATAGCGCCCGCGTCGCGCCCGCATACTGCGCCGCGTCAATTTTTGGGGTGGCCGCGCCGCGCCGCGTTTCCGCTTTGACAACTATGGTTTTACTTGAAATGTATTAGAAACTGATTTCTTGTTATATTTTGCCTTGCCTGTTGTGTATGACGCAGGGGCTAGGAATGCGACAAGAGCTGTGTCTTCAGAGGAATGGAAAATTGAATGACTATTGAATCACCATTCTTGAGAAATCTTAATGTTATATTAATGCATTTACACTTCTCTTTATCTCTCTGCAGGCATAAGAAGCAAAAGGAGGAGGATATTGCTATATGTGAATGCAGGTATGATGAAGATGATCCTGACAGTGCCTGTGGAGATGGGTGTCTAAATGTATTAACCAGCACTGAATGCAACCCTGGATTTTGCCCTTGTGGGATCCTTTGTAAAAATCAGGTGAGTTCGTGTTTGGGTCTGTTTGTGATAATATTTGTTAGTCTTTTGCATTATAACCATCCTGCAGGTAGTTAAAAAGTTGGTTAAGAGAAGTTATTAGTTATTACTATTTGCTTTAACTTGTGTCTCTGAAGGCACTTGTCATAATTTGTTTCATATTTGTATTCTGCTTTCCCTGGTTATTTTGTTCTACAAGTTTCTTAGTAGCTGTCGAGTTTGCTCGTCTTGAATTTTTTCATATCCTATTTTCATTGCATACTTTTTTTAATCTTTGACCTACTTAAACTTTACTTCAGATGATGCATTGAAGCTTACGTCAATTCATATATGATATATTCTGATATCGAAAAATGTTTTAGATGTTTCTAGTCAGTTAACTTAACTGGCATTCAGTTATGAACGAACTAGTTAGTTAATAGCAGTCTGTAGTTACAATCGGTTACTCTGTACAACTTTTCTTCTAAGTAGTGCGGCTATAGATATCATTGCAATCGGAAGATGAATTCAATAGCTTTTACCTAAAGAAATATTCTCGTTTTCTTTCTCTCTTCTCTAGATGAAATATATTCATGTTCCATGTCTCATGCTTGCAGAAATTTCAGAAGTGTGAATATGCAAAAACAAAGTTATTTAAACTGAAGGCCGAGGGTGGGGTCTTTTGGCTGATGAGGAAATTAAGGTAATCATATAATGGGGAAATTTAGGCCTTAATATGGTTATTTTTCTTTTATTTCAGTAGTGCCATACGCTCATCTATTTATTTGTTTGTTTATTTCATATAGGCAGGACAGTTTGTCATTGAATACTTTGGAGAAGTAATATCATGCAAAGAAGCCATGTGCAGATCCCATACTTATGAAACTCAAGGTCAAACATCAATAAAATTAACGTTTCTATCTGATGAGTATTTAGTTTATGTTTTTGTAAAACTTTTGTTTGCTTTTGCAGGTCTTAAGGATGCATTTATCATTTCTCTTAATGCGTCTGAATCTATCGATGCAACTAGAAAAGGAAGCCTTGCAAGATTTATAAACCATTCCTGGTAAACTACTTCAAACAAAAATCCTAATATTAAATGAAATTTACCTGCCAATATGCAAGTATTGTAGACCTGTTTTGTTATCTTCCTATTTCCCACTGCCCAAGGCTTGACATCAACTGAATGCTTTTATGTTTGCAGTCAACCAAACTGTGAGACAAGAAAATGGAATGTCATGGGGGAAATAAGAGTTGGAATATTTGCACTGGAAGATATTCCTATTGGAACTGAACTGGCATATGACTATAATTTTGAATGGTTTGGAGGTGCAAAGGTTCGCTGCCTCTGTGGTGCGCTCAAATGTTCTGAATTCCATGGAGCAAAATCTCGTGGTTTTCAAGTGAGTTTTAGTTAATATTACTAGTAACCTATAAATGTTAAAACGCTTGAAAGCAAATTCATTGCAATTTTTTATTAGTTAAGCCTTTTCAATGCATGGGCATGATGTTGACTGTTGTAGACCATGAGTTTTTAAGACCCACTAATAGCTTGAACGGACTCAGGTCTGAGGTTCGAACCTCAGATACCACAAAAAAAAGGTTCGAACCTCGGAGTAAAGGAGTGTTACCAATGCCGGTGTTATGAAAAATAGTTTTATTGGTGAGAATTAACAACTTTATTATGCCTTCATAGTTAATGTTTTTTTAATTGAATATGTATACTTTCGTTTTCAGTCATAAAAAAGATTAATTTTTTAATCAACCTTAGTTTTATGTGATGTTTTTATTTTGAACCACTATGCATTTGATTGTATTGTATTGTTTGTCAACTGAGATTCTTTTGATTTTAAGTGGATTCTATATGCACTTTAGAATCCTTTGAGTTATTTTAAACTGTTGGCTATGCTGGAAATTGAATGATACTTGATTAATTTTTCATTCCATACGACACAGGAGAATATGCTCGAGGTAGATCTATTGAGTAATTTGGATTGCTTGTCACGAGTCCTCTCAATGTTTGGTGTTTTTTTTTTGTGTGGTTGTGGCTGCTTTTATTTCATATATATGTATTGTCCACGAACTTTCATTTTTATGCAAGTGTACATTAGATCTCATTTAGGATTGATTAATATTTATGACATTTGTAAATAAGTTTCTGATCAACAAATTACTAGTGTTTATTTCTATCAATGGATTACTAGTGTTTCTAATCATTATCTTGTTGTATTGTCTGATCAACATTTTATTATAATGCTTTTGGCTGTAGATTTCATTTAAAAAAATAAAATAAAAATAGGGACTTTTATTAGCGCTTTATGTAAAACGCTAAGAAACATCGGTTAAAAATAGCACAAAAATTAAGCTATATTAGCGCTTTTCTGAAAGCGCTAAGAAACATCAGTTAAAAATAGCACCTAAACTGAGGCTTTATTAGCGCTTTTCAGAAAGCGCTATTGAAACGTTGCTATTTAATAGCGTTTCGAAAGCGCTATTATAGGCTCCTGACCTTTTATAGCGGGGGCTTTCTTAGCGCTTGAGAAGCGCTATTAAGAGCCAAAATAAGTGCTATTAAAGGGGGTATTTTGTAGTAGTAGTTGCTGGGAAATTCTGCATAATTCATACTATCTGAAGGGTTATTATGTGAACCGATTCATAAACTATCATAATGGAAACATATAATAAGATATTTTGCTTTCACTAATTAATATCTTAATTGATTTATGTATGTGCTTGAATGGAACCATATAATAAGATAAAATTAAGATATAGATAATGACATCTCATTGGACTGTGGTTGGTTAGAAACTTTCTTAGATTACATGTAATTATGTCTGTCTCTTCTGAAATTCTTTTTACTATGTTATGAGATATTGAGATTATTCAGCTCAATATTTTGTGCATTGTACATAGATTCATGGCAACGAGAACGAGAGACTGGAGGCGCCAAAGGCCTCCGGTGAATTTGGGAGACCCTATTCCTCCAGGATACACAGATCAAGCTTGGGCAGCTGTGCAGGTTCGCTAA
Protein sequence

>MS.gene90195.t1

MRAVCRIALQHRSNLATFLETYGSEVVDALMQVLWGILDFEQPDTQTMNNIVMSAVELIYCYAECLALHVKDSGVHCVAPAVVLLKKLLFSSDEAVQTASRHKKQKEEDIAICECRYDEDDPDSACGDGCLNVLTSTECNPGFCPCGILCKNQKFQKCEYAKTKLFKLKAEGGAGQFVIEYFGEVISCKEAMCRSHTYETQGLKDAFIISLNASESIDATRKGSLARFINHSCQPNCETRKWNVMGEIRVGIFALEDIPIGTELAYDYNFEWFGGAKVRCLCGALKCSEFHGAKSRGFQENMLEVDLLSNLDCLSRVLSIFMATRTRDWRRQRPPVNLGDPIPPGYTDQAWAAVQVR