Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90229.t1 | XP_003608402.1 | 94 | 334 | 19 | 1 | 1 | 333 | 1 | 334 | 6.30E-173 | 616.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90229.t1 | Q8H1G0 | 59.0 | 188 | 69 | 3 | 40 | 220 | 80 | 266 | 3.3e-45 | 183.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90229.t1 | G7JV51 | 94.0 | 334 | 19 | 1 | 1 | 333 | 1 | 334 | 4.6e-173 | 616.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene90229.t1 | TF | C2C2-GATA |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90229.t1 | MTR_4g093730 | 94.012 | 334 | 19 | 1 | 1 | 333 | 1 | 334 | 0.0 | 651 |
| MS.gene90229.t1 | MTR_3g100040 | 46.512 | 301 | 132 | 8 | 40 | 318 | 66 | 359 | 1.96e-75 | 236 |
| MS.gene90229.t1 | MTR_3g100040 | 43.893 | 262 | 118 | 8 | 79 | 318 | 1 | 255 | 9.96e-58 | 187 |
| MS.gene90229.t1 | MTR_3g100050 | 43.333 | 270 | 127 | 7 | 5 | 268 | 33 | 282 | 7.54e-57 | 187 |
| MS.gene90229.t1 | MTR_5g066510 | 54.595 | 185 | 67 | 7 | 41 | 219 | 72 | 245 | 3.14e-56 | 184 |
| MS.gene90229.t1 | MTR_5g066510 | 51.538 | 130 | 49 | 5 | 41 | 164 | 72 | 193 | 3.36e-30 | 114 |
| MS.gene90229.t1 | MTR_3g060200 | 49.038 | 104 | 40 | 6 | 140 | 235 | 11 | 109 | 4.04e-19 | 87.0 |
| MS.gene90229.t1 | MTR_3g060200 | 49.038 | 104 | 40 | 6 | 140 | 235 | 11 | 109 | 1.13e-18 | 86.7 |
| MS.gene90229.t1 | MTR_3g060200 | 49.038 | 104 | 40 | 6 | 140 | 235 | 11 | 109 | 2.08e-18 | 86.3 |
| MS.gene90229.t1 | MTR_3g060200 | 49.038 | 104 | 40 | 6 | 140 | 235 | 11 | 109 | 2.46e-18 | 85.5 |
| MS.gene90229.t1 | MTR_4g008070 | 48.101 | 79 | 34 | 2 | 140 | 211 | 1 | 79 | 1.54e-14 | 68.9 |
| MS.gene90229.t1 | MTR_4g008090 | 47.368 | 76 | 37 | 1 | 62 | 137 | 12 | 84 | 2.99e-13 | 66.2 |
| MS.gene90229.t1 | MTR_3g037390 | 63.830 | 47 | 17 | 0 | 103 | 149 | 389 | 435 | 1.30e-12 | 68.6 |
| MS.gene90229.t1 | MTR_3g037390 | 63.830 | 47 | 17 | 0 | 103 | 149 | 493 | 539 | 1.87e-12 | 68.6 |
| MS.gene90229.t1 | MTR_4g108880 | 64.444 | 45 | 16 | 0 | 104 | 148 | 501 | 545 | 9.65e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90229.t1 | AT1G51600 | 59.043 | 188 | 69 | 3 | 40 | 220 | 80 | 266 | 1.51e-61 | 199 |
| MS.gene90229.t1 | AT1G51600 | 59.043 | 188 | 69 | 3 | 40 | 220 | 80 | 266 | 1.51e-61 | 199 |
| MS.gene90229.t1 | AT3G21175 | 55.440 | 193 | 70 | 5 | 38 | 220 | 74 | 260 | 3.29e-60 | 195 |
| MS.gene90229.t1 | AT3G21175 | 54.922 | 193 | 73 | 4 | 38 | 220 | 74 | 262 | 4.18e-60 | 195 |
| MS.gene90229.t1 | AT4G24470 | 47.442 | 215 | 96 | 6 | 19 | 230 | 63 | 263 | 4.60e-51 | 172 |
| MS.gene90229.t1 | AT4G24470 | 47.442 | 215 | 96 | 6 | 19 | 230 | 63 | 263 | 4.60e-51 | 172 |
| MS.gene90229.t1 | AT4G24470 | 47.442 | 215 | 96 | 6 | 19 | 230 | 63 | 263 | 6.13e-51 | 172 |
| MS.gene90229.t1 | AT3G21175 | 57.018 | 114 | 46 | 2 | 38 | 151 | 74 | 184 | 4.97e-33 | 122 |
Find 82 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAAACTCACATGGATTC+TGG | 0.211139 | 4.2:-19939251 | None:intergenic |
| CGGGCTCATGTGGGCAAATA+AGG | 0.235102 | 4.2:+19939472 | MS.gene90229:CDS |
| CAAGCATTGCATAGAGTTCT+TGG | 0.242885 | 4.2:-19939449 | None:intergenic |
| ACCTCTCAGCAAGCTCTTTA+CGG | 0.268811 | 4.2:-19938638 | None:intergenic |
| AGGATTACAGGATAATATTA+TGG | 0.274171 | 4.2:+19941307 | MS.gene90229:intron |
| ACTGAATTTGAGATTCCTTT+AGG | 0.291144 | 4.2:+19941353 | MS.gene90229:CDS |
| AGCAAAACTGTCGGGACATT+TGG | 0.300350 | 4.2:+19938404 | MS.gene90229:CDS |
| TCCGTGAAAGCTTTGAATTA+CGG | 0.336575 | 4.2:-19938542 | None:intergenic |
| TTGGCAAAGGCTTTGTTTCA+TGG | 0.339952 | 4.2:-19940463 | None:intergenic |
| GCTGTATTGTTACTCTTAGA+TGG | 0.341296 | 4.2:+19938337 | MS.gene90229:CDS |
| GGAGATCTGCATCACTTGTT+AGG | 0.347795 | 4.2:+19938562 | MS.gene90229:CDS |
| GAACTCTATGCAATGCTTGC+GGG | 0.368924 | 4.2:+19939453 | MS.gene90229:CDS |
| TTGAAACTCACATGGATTCT+GGG | 0.372841 | 4.2:-19939250 | None:intergenic |
| ATTCCAATATGAGGACTTAC+TGG | 0.374469 | 4.2:+19941489 | MS.gene90229:CDS |
| TGGCAAAGGCTTTGTTTCAT+GGG | 0.392126 | 4.2:-19940462 | None:intergenic |
| GCAATGCTTGCGGGCTCATG+TGG | 0.395096 | 4.2:+19939462 | MS.gene90229:CDS |
| GCCGGTCCTCGACGCATTAC+CGG | 0.398091 | 4.2:-19939422 | None:intergenic |
| GCAAAACTGTCGGGACATTT+GGG | 0.401442 | 4.2:+19938405 | MS.gene90229:CDS |
| GAACTCACCATTTCCTTTGA+AGG | 0.410545 | 4.2:+19937924 | MS.gene90229:CDS |
| AGATGCCAGCATTGTGGAAT+TGG | 0.421996 | 4.2:+19939386 | MS.gene90229:CDS |
| CCCTTCCGTTACGCCAGAAA+AGG | 0.437686 | 4.2:+19937962 | MS.gene90229:CDS |
| AGAAAATTCATGTGCTGCAC+AGG | 0.441655 | 4.2:+19940282 | MS.gene90229:CDS |
| ACCTGCTCAATTATCATCTC+AGG | 0.443550 | 4.2:-19940503 | None:intergenic |
| TATCATCTCAGGTGACTGTC+TGG | 0.447979 | 4.2:-19940492 | None:intergenic |
| CAAGAGCATTATTCTCCACT+TGG | 0.451852 | 4.2:-19941125 | None:intergenic |
| CAGCCAGTAAGTCCTCATAT+TGG | 0.453388 | 4.2:-19941492 | None:intergenic |
| GAGTGGAACAGAAGCGGTAA+TGG | 0.454383 | 4.2:-19937889 | None:intergenic |
| TCCGTAATTCAAAGCTTTCA+CGG | 0.456528 | 4.2:+19938541 | MS.gene90229:CDS |
| ATGCTGAATTCGTCTGAGAA+TGG | 0.460337 | 4.2:+19937804 | MS.gene90229:CDS |
| TGCTGAATTCGTCTGAGAAT+GGG | 0.470907 | 4.2:+19937805 | MS.gene90229:CDS |
| AATAGGATGCAACGGAAGAA+TGG | 0.473196 | 4.2:+19939155 | MS.gene90229:intron |
| GGCAAAGGCTTTGTTTCATG+GGG | 0.473835 | 4.2:-19940461 | None:intergenic |
| AACCTCGCCTTCAAAGGAAA+TGG | 0.478631 | 4.2:-19937931 | None:intergenic |
| CAGTTCTCCTGCTGAAAACC+AGG | 0.478700 | 4.2:+19939205 | MS.gene90229:CDS |
| AGTGGAACAGAAGCGGTAAT+GGG | 0.481649 | 4.2:-19937888 | None:intergenic |
| ATTGTTACTCTTAGATGGGC+AGG | 0.482284 | 4.2:+19938342 | MS.gene90229:CDS |
| ACCTGAGATGATAATTGAGC+AGG | 0.486485 | 4.2:+19940502 | MS.gene90229:CDS |
| TGCTCTTGATCTGCACGAGC+AGG | 0.491928 | 4.2:+19941140 | MS.gene90229:CDS |
| ACAGAAGCGGTAATGGGTTG+AGG | 0.500608 | 4.2:-19937882 | None:intergenic |
| TTGCACCAATTCCACAATGC+TGG | 0.502619 | 4.2:-19939391 | None:intergenic |
| CTGAGAGATCTCGGCAAAGC+AGG | 0.503407 | 4.2:+19939774 | MS.gene90229:CDS |
| GAGTACTGTTGCTAGAATCC+TGG | 0.505753 | 4.2:-19939223 | None:intergenic |
| TTCGGTGCAGCAAAACTGTC+GGG | 0.506228 | 4.2:+19938396 | MS.gene90229:CDS |
| TGGACAGTTTGCATCATTGA+AGG | 0.506543 | 4.2:+19939175 | MS.gene90229:CDS |
| GCTCTTTACGGCAAGTGTAC+CGG | 0.507579 | 4.2:-19938626 | None:intergenic |
| AACATAAACCTCGCCTTCAA+AGG | 0.517160 | 4.2:-19937937 | None:intergenic |
| TCCGGTAATGCGTCGAGGAC+CGG | 0.522308 | 4.2:+19939421 | MS.gene90229:CDS |
| GGTGACTGTCTGGCATCCAT+TGG | 0.523909 | 4.2:-19940482 | None:intergenic |
| CACCATTTCCTTTGAAGGCG+AGG | 0.528900 | 4.2:+19937929 | MS.gene90229:CDS |
| CTGTATTGTTACTCTTAGAT+GGG | 0.529102 | 4.2:+19938338 | MS.gene90229:CDS |
| ACCTGATCATCAAAACCTAA+AGG | 0.529543 | 4.2:-19941368 | None:intergenic |
| TTCGTCTGAGAATGGGTCAA+TGG | 0.534504 | 4.2:+19937812 | MS.gene90229:CDS |
| AGCATTATTCTCCACTTGGA+TGG | 0.538269 | 4.2:-19941121 | None:intergenic |
| AAAGCTTTGAATTACGGAAA+GGG | 0.538823 | 4.2:-19938536 | None:intergenic |
| ATATTGATGATTCCAATATG+AGG | 0.538934 | 4.2:+19941480 | MS.gene90229:CDS |
| AGCTACATTGGTACAGTGCA+TGG | 0.556675 | 4.2:-19937835 | None:intergenic |
| CATAGAGTTCTTGGACCAGC+CGG | 0.557209 | 4.2:-19939440 | None:intergenic |
| AAGGGAACACTGAGAGATCT+CGG | 0.561679 | 4.2:+19939765 | MS.gene90229:intron |
| GAAAGCTTTGAATTACGGAA+AGG | 0.561743 | 4.2:-19938537 | None:intergenic |
| TTTCGGTGCAGCAAAACTGT+CGG | 0.562482 | 4.2:+19938395 | MS.gene90229:CDS |
| TGAAACAAAGCCTTTGCCAA+TGG | 0.564941 | 4.2:+19940466 | MS.gene90229:CDS |
| GTCAGAAACGGAAGCTACAT+TGG | 0.567531 | 4.2:-19937847 | None:intergenic |
| ACTCACATGGATTCTGGGAA+AGG | 0.570438 | 4.2:-19939245 | None:intergenic |
| GTAGCTTCCGTTTCTGACGA+AGG | 0.576494 | 4.2:+19937852 | MS.gene90229:CDS |
| GTAATGCGTCGAGGACCGGC+TGG | 0.578356 | 4.2:+19939425 | MS.gene90229:CDS |
| ATTACAGGATAATATTATGG+AGG | 0.581083 | 4.2:+19941310 | MS.gene90229:intron |
| CTGCACCGAAAAGTCAGAAG+TGG | 0.584625 | 4.2:-19938383 | None:intergenic |
| AGAACTCTATGCAATGCTTG+CGG | 0.585395 | 4.2:+19939452 | MS.gene90229:CDS |
| ATGTGCTGCACAGGACAAGA+AGG | 0.588693 | 4.2:+19940291 | MS.gene90229:CDS |
| TGTCTGGCATCCATTGGCAA+AGG | 0.604496 | 4.2:-19940476 | None:intergenic |
| TGATAACTTGTCCATCCAAG+TGG | 0.607711 | 4.2:+19941110 | MS.gene90229:CDS |
| AGTTCACTAGCACGAGAGAG+TGG | 0.611323 | 4.2:-19937906 | None:intergenic |
| GAACGTAGATGCCAGCATTG+TGG | 0.619610 | 4.2:+19939380 | MS.gene90229:CDS |
| CAATGCTTGCGGGCTCATGT+GGG | 0.620002 | 4.2:+19939463 | MS.gene90229:CDS |
| GCAAAGGCTTTGTTTCATGG+GGG | 0.623713 | 4.2:-19940460 | None:intergenic |
| ATTCATCTAATAGGATGCAA+CGG | 0.631265 | 4.2:+19939147 | MS.gene90229:intron |
| ACGAGAGAGTGGAACAGAAG+CGG | 0.632477 | 4.2:-19937895 | None:intergenic |
| GAGATCTCGGCAAAGCAGGA+AGG | 0.645047 | 4.2:+19939778 | MS.gene90229:CDS |
| AATTGGTGCAAAGTCTACTC+CGG | 0.650622 | 4.2:+19939403 | MS.gene90229:CDS |
| TGCACCGAAAAGTCAGAAGT+GGG | 0.670616 | 4.2:-19938382 | None:intergenic |
| TCTACTCCGGTAATGCGTCG+AGG | 0.699165 | 4.2:+19939416 | MS.gene90229:CDS |
| GCCGTAAAGAGCTTGCTGAG+AGG | 0.703271 | 4.2:+19938637 | MS.gene90229:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTTCTTTTATATTATAAAT+TGG | + | chr4.2:19938737-19938756 | MS.gene90229:intron | 10.0% |
| !! | AAAAGGAAAAAGAAAAAAAA+AGG | - | chr4.2:19938817-19938836 | None:intergenic | 15.0% |
| !! | ATGAAATTAATTCATCTAAT+AGG | + | chr4.2:19939138-19939157 | MS.gene90229:intron | 15.0% |
| !! | TCAATAACATATTATATTCT+TGG | - | chr4.2:19939886-19939905 | None:intergenic | 15.0% |
| !! | TTTAAGCCAAATAATTTAAA+AGG | - | chr4.2:19938834-19938853 | None:intergenic | 15.0% |
| !!! | CTTTTTCCTTTTAAATTATT+TGG | + | chr4.2:19938825-19938844 | MS.gene90229:intron | 15.0% |
| !!! | TTTTATATTATAAATTGGTC+TGG | + | chr4.2:19938742-19938761 | MS.gene90229:intron | 15.0% |
| !!! | TTTTGATCATGTTTATTATT+TGG | + | chr4.2:19938231-19938250 | MS.gene90229:intron | 15.0% |
| !! | AAAATTTATGATGTTTACCA+GGG | + | chr4.2:19938504-19938523 | MS.gene90229:intron | 20.0% |
| !! | AAAGAAATCATACAAAAATG+AGG | - | chr4.2:19939592-19939611 | None:intergenic | 20.0% |
| !! | ACAAAGTAAATGATAGATAA+AGG | - | chr4.2:19941419-19941438 | None:intergenic | 20.0% |
| !! | ATAAGACTGATAAAAGATAA+AGG | - | chr4.2:19940419-19940438 | None:intergenic | 20.0% |
| !! | ATAATTAAGTTTGATATGAC+AGG | - | chr4.2:19940768-19940787 | None:intergenic | 20.0% |
| !! | ATATTACAAATAACCAAGAT+AGG | - | chr4.2:19938982-19939001 | None:intergenic | 20.0% |
| !! | ATGTTCGGATAAAAAAATTT+AGG | - | chr4.2:19941003-19941022 | None:intergenic | 20.0% |
| !! | CAATAAAATGACATTATGTT+CGG | - | chr4.2:19941018-19941037 | None:intergenic | 20.0% |
| !! | TAAAATTTATGATGTTTACC+AGG | + | chr4.2:19938503-19938522 | MS.gene90229:intron | 20.0% |
| !! | TAAGAATTAAGTAAATGAAG+CGG | + | chr4.2:19940791-19940810 | MS.gene90229:intron | 20.0% |
| !! | TAAGACTGATAAAAGATAAA+GGG | - | chr4.2:19940418-19940437 | None:intergenic | 20.0% |
| !! | TAATTAAGTTTGATATGACA+GGG | - | chr4.2:19940767-19940786 | None:intergenic | 20.0% |
| !! | TAGAAAATGTAATTACTACA+TGG | - | chr4.2:19940731-19940750 | None:intergenic | 20.0% |
| !! | TATTTATTTGTTTGTATTCG+TGG | + | chr4.2:19940532-19940551 | MS.gene90229:intron | 20.0% |
| !! | TTTCAAAATAACTCTTCATT+CGG | + | chr4.2:19938435-19938454 | MS.gene90229:intron | 20.0% |
| !!! | CATGTTTATTATTTGGATTT+TGG | + | chr4.2:19938238-19938257 | MS.gene90229:intron | 20.0% |
| !!! | CATTAGTTTGAAAGTTAAAA+TGG | + | chr4.2:19939281-19939300 | MS.gene90229:intron | 20.0% |
| !!! | TAAAAAAATTGAACCTTTTC+TGG | - | chr4.2:19937978-19937997 | None:intergenic | 20.0% |
| !!! | TGTAGTAATTACATTTTCTA+TGG | + | chr4.2:19940731-19940750 | MS.gene90229:intron | 20.0% |
| !!! | TGTCATTTTATTGAACATTT+TGG | + | chr4.2:19941025-19941044 | MS.gene90229:intron | 20.0% |
| !!! | TTACCTTTTAGTCTTAATAT+TGG | + | chr4.2:19939312-19939331 | MS.gene90229:intron | 20.0% |
| !!! | TTATGAGCTAATTTAAGATT+GGG | + | chr4.2:19938860-19938879 | MS.gene90229:intron | 20.0% |
| ! | AAAAAACTTCAATTGAACGA+TGG | - | chr4.2:19938019-19938038 | None:intergenic | 25.0% |
| ! | AAAAACTTCAATTGAACGAT+GGG | - | chr4.2:19938018-19938037 | None:intergenic | 25.0% |
| ! | AAATTTATGATGTTTACCAG+GGG | + | chr4.2:19938505-19938524 | MS.gene90229:intron | 25.0% |
| ! | ACTCTATGCAATAAAGTTTA+AGG | + | chr4.2:19938107-19938126 | MS.gene90229:intron | 25.0% |
| ! | AGGATTACAGGATAATATTA+TGG | + | chr4.2:19941307-19941326 | MS.gene90229:intron | 25.0% |
| ! | ATTACAGGATAATATTATGG+AGG | + | chr4.2:19941310-19941329 | MS.gene90229:intron | 25.0% |
| ! | TGTGAAACAACAATATCAAT+AGG | - | chr4.2:19938714-19938733 | None:intergenic | 25.0% |
| !! | AAATGGAAGCATATTTAAAG+AGG | - | chr4.2:19938946-19938965 | None:intergenic | 25.0% |
| !! | AACATTTTGGATGAACATTT+TGG | + | chr4.2:19941038-19941057 | MS.gene90229:intron | 25.0% |
| !! | AATGGAAGCATATTTAAAGA+GGG | - | chr4.2:19938945-19938964 | None:intergenic | 25.0% |
| !! | ACCATTCTTGTGATTTTTAA+AGG | + | chr4.2:19938271-19938290 | MS.gene90229:intron | 25.0% |
| !! | ATATTGATGATTCCAATATG+AGG | + | chr4.2:19941480-19941499 | MS.gene90229:CDS | 25.0% |
| !! | ATTCTTGGTTACTTTATAAC+AGG | - | chr4.2:19939871-19939890 | None:intergenic | 25.0% |
| !! | CTTATGAGCTAATTTAAGAT+TGG | + | chr4.2:19938859-19938878 | MS.gene90229:intron | 25.0% |
| !! | GAAATTTGATGATATTACAG+AGG | - | chr4.2:19939659-19939678 | None:intergenic | 25.0% |
| !! | TATGCAATAAAGTTTAAGGT+TGG | + | chr4.2:19938111-19938130 | MS.gene90229:intron | 25.0% |
| !! | TCCTTTAAAAATCACAAGAA+TGG | - | chr4.2:19938275-19938294 | None:intergenic | 25.0% |
| !! | TTATTGAGAATGCAAGTTTT+TGG | + | chr4.2:19940847-19940866 | MS.gene90229:intron | 25.0% |
| !! | TTCATTTTGCATATTTTCAC+TGG | + | chr4.2:19939833-19939852 | MS.gene90229:intron | 25.0% |
| !!! | ACAAAAGTGTCATTAATTTG+CGG | - | chr4.2:19940336-19940355 | None:intergenic | 25.0% |
| !!! | ATATAACTTTGAAACTCACA+TGG | - | chr4.2:19939261-19939280 | None:intergenic | 25.0% |
| !!! | GACAAATCTACAATTTTTTC+GGG | - | chr4.2:19938795-19938814 | None:intergenic | 25.0% |
| !!! | GGACAAATCTACAATTTTTT+CGG | - | chr4.2:19938796-19938815 | None:intergenic | 25.0% |
| !!! | TAATTTGCATTGGATTTTGA+GGG | - | chr4.2:19940135-19940154 | None:intergenic | 25.0% |
| !!! | TAGGCTTTATTCAACTTAAA+TGG | - | chr4.2:19938963-19938982 | None:intergenic | 25.0% |
| !!! | TCTTAATATTGGTGCTAATA+CGG | + | chr4.2:19939323-19939342 | MS.gene90229:intron | 25.0% |
| !!! | TGATAGTTTTGTCAAGTTTT+TGG | + | chr4.2:19940923-19940942 | MS.gene90229:intron | 25.0% |
| AAAACTTCAATTGAACGATG+GGG | - | chr4.2:19938017-19938036 | None:intergenic | 30.0% | |
| AACTATCATCATTATCCACA+TGG | - | chr4.2:19940911-19940930 | None:intergenic | 30.0% | |
| AAGTTGAATAAAGCCTATCT+TGG | + | chr4.2:19938966-19938985 | MS.gene90229:intron | 30.0% | |
| ACCAATGTCACAAGAAAATA+AGG | - | chr4.2:19940390-19940409 | None:intergenic | 30.0% | |
| ACTATCATCATTATCCACAT+GGG | - | chr4.2:19940910-19940929 | None:intergenic | 30.0% | |
| ATTCATCTAATAGGATGCAA+CGG | + | chr4.2:19939147-19939166 | MS.gene90229:intron | 30.0% | |
| CAATGTCACAAGAAAATAAG+GGG | - | chr4.2:19940388-19940407 | None:intergenic | 30.0% | |
| CCAATGTCACAAGAAAATAA+GGG | - | chr4.2:19940389-19940408 | None:intergenic | 30.0% | |
| CTGTATTGTTACTCTTAGAT+GGG | + | chr4.2:19938338-19938357 | MS.gene90229:CDS | 30.0% | |
| GCACCAATATTAAGACTAAA+AGG | - | chr4.2:19939318-19939337 | None:intergenic | 30.0% | |
| GCATTCTCAATAACATGAAT+TGG | - | chr4.2:19940840-19940859 | None:intergenic | 30.0% | |
| TGAAAACAGTTCGAGTATTA+GGG | + | chr4.2:19941252-19941271 | MS.gene90229:intron | 30.0% | |
| TGGATTAAGTTTCAGATAGT+GGG | + | chr4.2:19938131-19938150 | MS.gene90229:intron | 30.0% | |
| TTGGATTAAGTTTCAGATAG+TGG | + | chr4.2:19938130-19938149 | MS.gene90229:intron | 30.0% | |
| ! | AAGAAACTAAAATTAGCCTC+AGG | + | chr4.2:19940581-19940600 | MS.gene90229:intron | 30.0% |
| ! | ACTGAATTTGAGATTCCTTT+AGG | + | chr4.2:19941353-19941372 | MS.gene90229:CDS | 30.0% |
| ! | CATGAAATTTGAAGCATCTT+TGG | - | chr4.2:19940219-19940238 | None:intergenic | 30.0% |
| ! | GATTACACTCTAATTTGCAT+TGG | - | chr4.2:19940145-19940164 | None:intergenic | 30.0% |
| ! | TCTTTATGTTAGCTTAGCAT+AGG | + | chr4.2:19939504-19939523 | MS.gene90229:intron | 30.0% |
| !! | AAAGCTTTGAATTACGGAAA+GGG | - | chr4.2:19938539-19938558 | None:intergenic | 30.0% |
| !! | CTAATTTGCATTGGATTTTG+AGG | - | chr4.2:19940136-19940155 | None:intergenic | 30.0% |
| !! | CTATTTGCTACCTTTTTGTT+TGG | + | chr4.2:19940101-19940120 | MS.gene90229:intron | 30.0% |
| !! | TATGTTATTGATTCCGCATT+CGG | + | chr4.2:19939895-19939914 | MS.gene90229:intron | 30.0% |
| !! | TCTTATGTGTTTTTATCCTC+AGG | + | chr4.2:19940433-19940452 | MS.gene90229:intron | 30.0% |
| !!! | GATGTTTTGAGAAGAAAATC+CGG | + | chr4.2:19938607-19938626 | MS.gene90229:CDS | 30.0% |
| !!! | GCGTGCATACTTTTTTAATT+TGG | + | chr4.2:19940945-19940964 | MS.gene90229:intron | 30.0% |
| AAACTTCAATTGAACGATGG+GGG | - | chr4.2:19938016-19938035 | None:intergenic | 35.0% | |
| ACATCCAGGTTACATGAAAA+CGG | - | chr4.2:19939969-19939988 | None:intergenic | 35.0% | |
| ACCTGATCATCAAAACCTAA+AGG | - | chr4.2:19941371-19941390 | None:intergenic | 35.0% | |
| ACCTGCATTTCATTACAAAG+GGG | - | chr4.2:19938313-19938332 | None:intergenic | 35.0% | |
| ATTAGAGTGTAATCCGTTAG+TGG | + | chr4.2:19940151-19940170 | MS.gene90229:intron | 35.0% | |
| ATTCCAATATGAGGACTTAC+TGG | + | chr4.2:19941489-19941508 | MS.gene90229:CDS | 35.0% | |
| CACCTGCATTTCATTACAAA+GGG | - | chr4.2:19938314-19938333 | None:intergenic | 35.0% | |
| CATCTACGTTCACTTAAGAA+TGG | - | chr4.2:19939371-19939390 | None:intergenic | 35.0% | |
| CATGATTTAACACCTAGTTC+TGG | - | chr4.2:19939569-19939588 | None:intergenic | 35.0% | |
| CTAGCATTAGCAAGATTAGA+TGG | - | chr4.2:19941396-19941415 | None:intergenic | 35.0% | |
| CTATCATCATTATCCACATG+GGG | - | chr4.2:19940909-19940928 | None:intergenic | 35.0% | |
| CTGAAAACAGTTCGAGTATT+AGG | + | chr4.2:19941251-19941270 | MS.gene90229:intron | 35.0% | |
| GCTGTATTGTTACTCTTAGA+TGG | + | chr4.2:19938337-19938356 | MS.gene90229:CDS | 35.0% | |
| GGCAAGTAATCCAAACAAAA+AGG | - | chr4.2:19940114-19940133 | None:intergenic | 35.0% | |
| TATTTACCAACTAGAACCCA+TGG | + | chr4.2:19939614-19939633 | MS.gene90229:intron | 35.0% | |
| TCAAGAAAGAAACCTCAAAC+TGG | - | chr4.2:19940180-19940199 | None:intergenic | 35.0% | |
| TCCGTAATTCAAAGCTTTCA+CGG | + | chr4.2:19938541-19938560 | MS.gene90229:CDS | 35.0% | |
| TTAAAGTGTAATGCCGAATG+CGG | - | chr4.2:19939911-19939930 | None:intergenic | 35.0% | |
| TTAGACACTAACATGTTCTG+CGG | + | chr4.2:19939085-19939104 | MS.gene90229:intron | 35.0% | |
| TTGAAACTCACATGGATTCT+GGG | - | chr4.2:19939253-19939272 | None:intergenic | 35.0% | |
| ! | ATGAATTGGTCTCAATTTGC+TGG | - | chr4.2:19940826-19940845 | None:intergenic | 35.0% |
| ! | ATGAGTTCTGACATACATAC+AGG | + | chr4.2:19941454-19941473 | MS.gene90229:intron | 35.0% |
| ! | ATTTGACTTATCTGCTCACA+TGG | + | chr4.2:19940617-19940636 | MS.gene90229:intron | 35.0% |
| ! | GATGCAACACTAGAGAATTT+TGG | + | chr4.2:19940025-19940044 | MS.gene90229:intron | 35.0% |
| ! | GGATGAACATTTTGGATCTT+CGG | + | chr4.2:19941046-19941065 | MS.gene90229:intron | 35.0% |
| ! | TCTAGGGTTGTTATGATCTT+TGG | + | chr4.2:19938665-19938684 | MS.gene90229:intron | 35.0% |
| ! | TCTGGTATGTTACACTTTTG+AGG | + | chr4.2:19941287-19941306 | MS.gene90229:intron | 35.0% |
| ! | TGCTTTTGAACAGAATGAAC+TGG | + | chr4.2:19939803-19939822 | MS.gene90229:CDS | 35.0% |
| ! | TTAGGGCATTATTTGAGATC+TGG | + | chr4.2:19941269-19941288 | MS.gene90229:intron | 35.0% |
| ! | TTATGATCTTTGGTGCAGTT+TGG | + | chr4.2:19938675-19938694 | MS.gene90229:intron | 35.0% |
| ! | TTTAAGATTGGGCAAGTAGT+TGG | + | chr4.2:19938871-19938890 | MS.gene90229:intron | 35.0% |
| ! | TTTGAAACTCACATGGATTC+TGG | - | chr4.2:19939254-19939273 | None:intergenic | 35.0% |
| ! | TTTGACTTATCTGCTCACAT+GGG | + | chr4.2:19940618-19940637 | MS.gene90229:intron | 35.0% |
| ! | TTTTCATGTAACCTGGATGT+TGG | + | chr4.2:19939969-19939988 | MS.gene90229:intron | 35.0% |
| ! | TTTTTCACCTTCGTCAGAAA+CGG | - | chr4.2:19937862-19937881 | None:intergenic | 35.0% |
| !! | GAAAGCTTTGAATTACGGAA+AGG | - | chr4.2:19938540-19938559 | None:intergenic | 35.0% |
| !! | GTTACACTTTTGAGGATTAC+AGG | + | chr4.2:19941295-19941314 | MS.gene90229:intron | 35.0% |
| !! | TCCGTGAAAGCTTTGAATTA+CGG | - | chr4.2:19938545-19938564 | None:intergenic | 35.0% |
| !! | TCCTTTAGGTTTTGATGATC+AGG | + | chr4.2:19941367-19941386 | MS.gene90229:CDS | 35.0% |
| !!! | ATAGTGGGTTTTCTACAATG+TGG | + | chr4.2:19938146-19938165 | MS.gene90229:intron | 35.0% |
| !!! | CCCTTATTTTCTTGTGACAT+TGG | + | chr4.2:19940386-19940405 | MS.gene90229:intron | 35.0% |
| AAAAGCTCCTGTTTAAGCCA+TGG | - | chr4.2:19939634-19939653 | None:intergenic | 40.0% | |
| AAAGCTCCTGTTTAAGCCAT+GGG | - | chr4.2:19939633-19939652 | None:intergenic | 40.0% | |
| AACATAAACCTCGCCTTCAA+AGG | - | chr4.2:19937940-19937959 | None:intergenic | 40.0% | |
| AAGATTTCCCAAGTCACTTC+AGG | - | chr4.2:19939696-19939715 | None:intergenic | 40.0% | |
| AAGCATCTTTGGTTGAGAAC+AGG | - | chr4.2:19940208-19940227 | None:intergenic | 40.0% | |
| AATAGGATGCAACGGAAGAA+TGG | + | chr4.2:19939155-19939174 | MS.gene90229:intron | 40.0% | |
| AATTGGTGCAAAGTCTACTC+CGG | + | chr4.2:19939403-19939422 | MS.gene90229:CDS | 40.0% | |
| AATTTCCTCATGATAGCCTG+AGG | - | chr4.2:19940600-19940619 | None:intergenic | 40.0% | |
| ACCCCTTTGTAATGAAATGC+AGG | + | chr4.2:19938309-19938328 | MS.gene90229:intron | 40.0% | |
| ACCTGAGATGATAATTGAGC+AGG | + | chr4.2:19940502-19940521 | MS.gene90229:CDS | 40.0% | |
| ACCTGCTCAATTATCATCTC+AGG | - | chr4.2:19940506-19940525 | None:intergenic | 40.0% | |
| AGAAAATTCATGTGCTGCAC+AGG | + | chr4.2:19940282-19940301 | MS.gene90229:CDS | 40.0% | |
| AGAACTCTATGCAATGCTTG+CGG | + | chr4.2:19939452-19939471 | MS.gene90229:CDS | 40.0% | |
| AGAGGGGAAAGTCATGAAAA+GGG | + | chr4.2:19941216-19941235 | MS.gene90229:intron | 40.0% | |
| AGCATTATTCTCCACTTGGA+TGG | - | chr4.2:19941124-19941143 | None:intergenic | 40.0% | |
| AGGTTACATGAAAACGGAAC+TGG | - | chr4.2:19939963-19939982 | None:intergenic | 40.0% | |
| ATATTTAAAGAGGGAGGCAG+GGG | - | chr4.2:19938936-19938955 | None:intergenic | 40.0% | |
| ATGCTGAATTCGTCTGAGAA+TGG | + | chr4.2:19937804-19937823 | MS.gene90229:CDS | 40.0% | |
| ATTGTTACTCTTAGATGGGC+AGG | + | chr4.2:19938342-19938361 | MS.gene90229:CDS | 40.0% | |
| CATATTTAAAGAGGGAGGCA+GGG | - | chr4.2:19938937-19938956 | None:intergenic | 40.0% | |
| CATTACAAAGGGGTGATCAA+AGG | - | chr4.2:19938303-19938322 | None:intergenic | 40.0% | |
| CTCTTCATTCGGACATGTAT+TGG | + | chr4.2:19938446-19938465 | MS.gene90229:intron | 40.0% | |
| GAAAGTCATGAAAAGGGTTG+AGG | + | chr4.2:19941222-19941241 | MS.gene90229:intron | 40.0% | |
| GAACTCACCATTTCCTTTGA+AGG | + | chr4.2:19937924-19937943 | MS.gene90229:CDS | 40.0% | |
| GACTACCTACTCTTCAAATG+AGG | + | chr4.2:19941183-19941202 | MS.gene90229:intron | 40.0% | |
| GCACCTGCATTTCATTACAA+AGG | - | chr4.2:19938315-19938334 | None:intergenic | 40.0% | |
| GCATGGTCTGTTGATATGAA+GGG | + | chr4.2:19939747-19939766 | MS.gene90229:intron | 40.0% | |
| GGATACCTCATTTGAAGAGT+AGG | - | chr4.2:19941191-19941210 | None:intergenic | 40.0% | |
| GGTTACATGAAAACGGAACT+GGG | - | chr4.2:19939962-19939981 | None:intergenic | 40.0% | |
| TACGTTCACTTAAGAATGGC+AGG | - | chr4.2:19939367-19939386 | None:intergenic | 40.0% | |
| TGAAACAAAGCCTTTGCCAA+TGG | + | chr4.2:19940466-19940485 | MS.gene90229:CDS | 40.0% | |
| TGCACGACATTAGAATATGC+TGG | + | chr4.2:19939033-19939052 | MS.gene90229:intron | 40.0% | |
| TGCTGAATTCGTCTGAGAAT+GGG | + | chr4.2:19937805-19937824 | MS.gene90229:CDS | 40.0% | |
| TGGACAGTTTGCATCATTGA+AGG | + | chr4.2:19939175-19939194 | MS.gene90229:CDS | 40.0% | |
| TTGTAATGAAATGCAGGTGC+AGG | + | chr4.2:19938315-19938334 | MS.gene90229:intron | 40.0% | |
| ! | AAATGAGGTATCCTTCTGAG+AGG | + | chr4.2:19941198-19941217 | MS.gene90229:intron | 40.0% |
| ! | AATGAGGTATCCTTCTGAGA+GGG | + | chr4.2:19941199-19941218 | MS.gene90229:intron | 40.0% |
| ! | AGGATTTTGCTGATGCATCT+GGG | + | chr4.2:19941330-19941349 | MS.gene90229:CDS | 40.0% |
| ! | AGTTCCGTTTTCATGTAACC+TGG | + | chr4.2:19939962-19939981 | MS.gene90229:intron | 40.0% |
| ! | CAAGCATTGCATAGAGTTCT+TGG | - | chr4.2:19939452-19939471 | None:intergenic | 40.0% |
| ! | GGAAGCATATTTAAAGAGGG+AGG | - | chr4.2:19938942-19938961 | None:intergenic | 40.0% |
| ! | TCTCAAGTTGTCACATCACA+TGG | + | chr4.2:19939996-19940015 | MS.gene90229:intron | 40.0% |
| ! | TGATAACTTGTCCATCCAAG+TGG | + | chr4.2:19941110-19941129 | MS.gene90229:CDS | 40.0% |
| ! | TGTGCAGCACATGAATTTTC+TGG | - | chr4.2:19940283-19940302 | None:intergenic | 40.0% |
| ! | TTTAAGCCATGGGTTCTAGT+TGG | - | chr4.2:19939623-19939642 | None:intergenic | 40.0% |
| !! | AATTGGTCTCAATTTGCTGG+AGG | - | chr4.2:19940823-19940842 | None:intergenic | 40.0% |
| !! | ACACTAGAGAATTTTGGCGT+AGG | + | chr4.2:19940031-19940050 | MS.gene90229:intron | 40.0% |
| !! | ATTGGTCTCAATTTGCTGGA+GGG | - | chr4.2:19940822-19940841 | None:intergenic | 40.0% |
| !! | CAAGAGCATTATTCTCCACT+TGG | - | chr4.2:19941128-19941147 | None:intergenic | 40.0% |
| !! | TGGCAAAGGCTTTGTTTCAT+GGG | - | chr4.2:19940465-19940484 | None:intergenic | 40.0% |
| !! | TTGAACCTTTTCTGGCGTAA+CGG | - | chr4.2:19937970-19937989 | None:intergenic | 40.0% |
| !! | TTGGCAAAGGCTTTGTTTCA+TGG | - | chr4.2:19940466-19940485 | None:intergenic | 40.0% |
| AACCTCGCCTTCAAAGGAAA+TGG | - | chr4.2:19937934-19937953 | None:intergenic | 45.0% | |
| AAGGGAACACTGAGAGATCT+CGG | + | chr4.2:19939765-19939784 | MS.gene90229:intron | 45.0% | |
| AAGTTCTGCACTCCAGAACT+AGG | + | chr4.2:19939554-19939573 | MS.gene90229:intron | 45.0% | |
| ACCTCTCAGCAAGCTCTTTA+CGG | - | chr4.2:19938641-19938660 | None:intergenic | 45.0% | |
| AGATGCCAGCATTGTGGAAT+TGG | + | chr4.2:19939386-19939405 | MS.gene90229:CDS | 45.0% | |
| AGCAAAACTGTCGGGACATT+TGG | + | chr4.2:19938404-19938423 | MS.gene90229:CDS | 45.0% | |
| AGCTACATTGGTACAGTGCA+TGG | - | chr4.2:19937838-19937857 | None:intergenic | 45.0% | |
| AGTGGAACAGAAGCGGTAAT+GGG | - | chr4.2:19937891-19937910 | None:intergenic | 45.0% | |
| ATTACTGACCTACGTTCGCA+TGG | + | chr4.2:19939730-19939749 | MS.gene90229:intron | 45.0% | |
| CAAGTCACTTCAGGCAAGAT+GGG | - | chr4.2:19939687-19939706 | None:intergenic | 45.0% | |
| CAGCCAGTAAGTCCTCATAT+TGG | - | chr4.2:19941495-19941514 | None:intergenic | 45.0% | |
| CATCTTGCCTGAAGTGACTT+GGG | + | chr4.2:19939686-19939705 | MS.gene90229:intron | 45.0% | |
| CGCATGGTCTGTTGATATGA+AGG | + | chr4.2:19939746-19939765 | MS.gene90229:intron | 45.0% | |
| CTAGAACCCATGGCTTAAAC+AGG | + | chr4.2:19939624-19939643 | MS.gene90229:intron | 45.0% | |
| CTCAAACTGGTGACCACTAA+CGG | - | chr4.2:19940167-19940186 | None:intergenic | 45.0% | |
| CTTGAGAAGATCCAACATCC+AGG | - | chr4.2:19939983-19940002 | None:intergenic | 45.0% | |
| GAACTCTATGCAATGCTTGC+GGG | + | chr4.2:19939453-19939472 | MS.gene90229:CDS | 45.0% | |
| GAGAGGGGAAAGTCATGAAA+AGG | + | chr4.2:19941215-19941234 | MS.gene90229:intron | 45.0% | |
| GCAAAACTGTCGGGACATTT+GGG | + | chr4.2:19938405-19938424 | MS.gene90229:CDS | 45.0% | |
| GCATATTTAAAGAGGGAGGC+AGG | - | chr4.2:19938938-19938957 | None:intergenic | 45.0% | |
| GGAGATCTGCATCACTTGTT+AGG | + | chr4.2:19938562-19938581 | MS.gene90229:CDS | 45.0% | |
| GTCAGAAACGGAAGCTACAT+TGG | - | chr4.2:19937850-19937869 | None:intergenic | 45.0% | |
| TATCATCTCAGGTGACTGTC+TGG | - | chr4.2:19940495-19940514 | None:intergenic | 45.0% | |
| TATTTAAAGAGGGAGGCAGG+GGG | - | chr4.2:19938935-19938954 | None:intergenic | 45.0% | |
| TGCACCGAAAAGTCAGAAGT+GGG | - | chr4.2:19938385-19938404 | None:intergenic | 45.0% | |
| TGCGAACGTAGGTCAGTAAT+TGG | - | chr4.2:19939730-19939749 | None:intergenic | 45.0% | |
| TTAGTGTCTTTAGCCCCATG+TGG | + | chr4.2:19940893-19940912 | MS.gene90229:intron | 45.0% | |
| TTCGTCTGAGAATGGGTCAA+TGG | + | chr4.2:19937812-19937831 | MS.gene90229:CDS | 45.0% | |
| TTGCACCAATTCCACAATGC+TGG | - | chr4.2:19939394-19939413 | None:intergenic | 45.0% | |
| TTGCTGAGAGGTAGAGTCTA+GGG | + | chr4.2:19938649-19938668 | MS.gene90229:intron | 45.0% | |
| ! | ACTCACATGGATTCTGGGAA+AGG | - | chr4.2:19939248-19939267 | None:intergenic | 45.0% |
| ! | ATGAGGTATCCTTCTGAGAG+GGG | + | chr4.2:19941200-19941219 | MS.gene90229:intron | 45.0% |
| ! | ATTAGCCTCAGGCTATCATG+AGG | + | chr4.2:19940592-19940611 | MS.gene90229:intron | 45.0% |
| ! | CGTACCCACTTCTGACTTTT+CGG | + | chr4.2:19938378-19938397 | MS.gene90229:CDS | 45.0% |
| ! | GAGGATTTTGCTGATGCATC+TGG | + | chr4.2:19941329-19941348 | MS.gene90229:CDS | 45.0% |
| ! | GAGTACTGTTGCTAGAATCC+TGG | - | chr4.2:19939226-19939245 | None:intergenic | 45.0% |
| ! | TTTCGGTGCAGCAAAACTGT+CGG | + | chr4.2:19938395-19938414 | MS.gene90229:CDS | 45.0% |
| !! | CTAGAATCCTGGTTTTCAGC+AGG | - | chr4.2:19939215-19939234 | None:intergenic | 45.0% |
| !! | GCAAAGGCTTTGTTTCATGG+GGG | - | chr4.2:19940463-19940482 | None:intergenic | 45.0% |
| !! | GGCAAAGGCTTTGTTTCATG+GGG | - | chr4.2:19940464-19940483 | None:intergenic | 45.0% |
| !!! | ATAGTATTATTTTTATTTTT+AGG | + | chr4.2:19940243-19940262 | MS.gene90229:intron | 5.0% |
| ACGAGAGAGTGGAACAGAAG+CGG | - | chr4.2:19937898-19937917 | None:intergenic | 50.0% | |
| AGTTCACTAGCACGAGAGAG+TGG | - | chr4.2:19937909-19937928 | None:intergenic | 50.0% | |
| ATGTGCTGCACAGGACAAGA+AGG | + | chr4.2:19940291-19940310 | MS.gene90229:CDS | 50.0% | |
| CAAGCTTTCACGTGAAGACG+TGG | - | chr4.2:19938909-19938928 | None:intergenic | 50.0% | |
| CAGTTCTCCTGCTGAAAACC+AGG | + | chr4.2:19939205-19939224 | MS.gene90229:CDS | 50.0% | |
| CATAGAGTTCTTGGACCAGC+CGG | - | chr4.2:19939443-19939462 | None:intergenic | 50.0% | |
| CATGACTTTCCCCTCTCAGA+AGG | - | chr4.2:19941212-19941231 | None:intergenic | 50.0% | |
| CCAAGTCACTTCAGGCAAGA+TGG | - | chr4.2:19939688-19939707 | None:intergenic | 50.0% | |
| CCATCTTGCCTGAAGTGACT+TGG | + | chr4.2:19939685-19939704 | MS.gene90229:intron | 50.0% | |
| CGTTAGTGGTCACCAGTTTG+AGG | + | chr4.2:19940165-19940184 | MS.gene90229:intron | 50.0% | |
| CTGCACCGAAAAGTCAGAAG+TGG | - | chr4.2:19938386-19938405 | None:intergenic | 50.0% | |
| CTTGCTGAGAGGTAGAGTCT+AGG | + | chr4.2:19938648-19938667 | MS.gene90229:intron | 50.0% | |
| GAACGTAGATGCCAGCATTG+TGG | + | chr4.2:19939380-19939399 | MS.gene90229:CDS | 50.0% | |
| GAGTGGAACAGAAGCGGTAA+TGG | - | chr4.2:19937892-19937911 | None:intergenic | 50.0% | |
| GCTCTTTACGGCAAGTGTAC+CGG | - | chr4.2:19938629-19938648 | None:intergenic | 50.0% | |
| GTAGCTTCCGTTTCTGACGA+AGG | + | chr4.2:19937852-19937871 | MS.gene90229:CDS | 50.0% | |
| TCAACAGACCATGCGAACGT+AGG | - | chr4.2:19939741-19939760 | None:intergenic | 50.0% | |
| TCTGCGGATCTTCTCGACTT+TGG | + | chr4.2:19939101-19939120 | MS.gene90229:intron | 50.0% | |
| TGTCTGGCATCCATTGGCAA+AGG | - | chr4.2:19940479-19940498 | None:intergenic | 50.0% | |
| ! | CACCATTTCCTTTGAAGGCG+AGG | + | chr4.2:19937929-19937948 | MS.gene90229:CDS | 50.0% |
| ! | TTCGGTGCAGCAAAACTGTC+GGG | + | chr4.2:19938396-19938415 | MS.gene90229:CDS | 50.0% |
| !! | ACAGAAGCGGTAATGGGTTG+AGG | - | chr4.2:19937885-19937904 | None:intergenic | 50.0% |
| !! | ACCTTTTCTGGCGTAACGGA+AGG | - | chr4.2:19937966-19937985 | None:intergenic | 50.0% |
| !! | CCTTTTCTGGCGTAACGGAA+GGG | - | chr4.2:19937965-19937984 | None:intergenic | 50.0% |
| !!! | GGAAAGGGTCATTTTTCCCC+TGG | - | chr4.2:19938524-19938543 | None:intergenic | 50.0% |
| CAATGCTTGCGGGCTCATGT+GGG | + | chr4.2:19939463-19939482 | MS.gene90229:CDS | 55.0% | |
| CACGTGAAGACGTGGCACAA+AGG | - | chr4.2:19938901-19938920 | None:intergenic | 55.0% | |
| CCCTTCCGTTACGCCAGAAA+AGG | + | chr4.2:19937962-19937981 | MS.gene90229:CDS | 55.0% | |
| CGGGCTCATGTGGGCAAATA+AGG | + | chr4.2:19939472-19939491 | MS.gene90229:CDS | 55.0% | |
| CTGAGAGATCTCGGCAAAGC+AGG | + | chr4.2:19939774-19939793 | MS.gene90229:CDS | 55.0% | |
| GAGATCTCGGCAAAGCAGGA+AGG | + | chr4.2:19939778-19939797 | MS.gene90229:CDS | 55.0% | |
| GGTGACTGTCTGGCATCCAT+TGG | - | chr4.2:19940485-19940504 | None:intergenic | 55.0% | |
| GTTTCATGGGGGCTTTCCTG+AGG | - | chr4.2:19940452-19940471 | None:intergenic | 55.0% | |
| TCTACTCCGGTAATGCGTCG+AGG | + | chr4.2:19939416-19939435 | MS.gene90229:CDS | 55.0% | |
| TGCTCTTGATCTGCACGAGC+AGG | + | chr4.2:19941140-19941159 | MS.gene90229:CDS | 55.0% | |
| !! | GCCGTAAAGAGCTTGCTGAG+AGG | + | chr4.2:19938637-19938656 | MS.gene90229:CDS | 55.0% |
| GCAATGCTTGCGGGCTCATG+TGG | + | chr4.2:19939462-19939481 | MS.gene90229:CDS | 60.0% | |
| TCCGGTAATGCGTCGAGGAC+CGG | + | chr4.2:19939421-19939440 | MS.gene90229:CDS | 60.0% | |
| TTAAAGAGGGAGGCAGGGGG+AGG | - | chr4.2:19938932-19938951 | None:intergenic | 60.0% | |
| GCCGGTCCTCGACGCATTAC+CGG | - | chr4.2:19939425-19939444 | None:intergenic | 65.0% | |
| GTAATGCGTCGAGGACCGGC+TGG | + | chr4.2:19939425-19939444 | MS.gene90229:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 19937798 | 19941517 | 19937798 | ID=MS.gene90229 |
| chr4.2 | mRNA | 19937798 | 19941517 | 19937798 | ID=MS.gene90229.t1;Parent=MS.gene90229 |
| chr4.2 | exon | 19937798 | 19937983 | 19937798 | ID=MS.gene90229.t1.exon1;Parent=MS.gene90229.t1 |
| chr4.2 | CDS | 19937798 | 19937983 | 19937798 | ID=cds.MS.gene90229.t1;Parent=MS.gene90229.t1 |
| chr4.2 | exon | 19938331 | 19938426 | 19938331 | ID=MS.gene90229.t1.exon2;Parent=MS.gene90229.t1 |
| chr4.2 | CDS | 19938331 | 19938426 | 19938331 | ID=cds.MS.gene90229.t1;Parent=MS.gene90229.t1 |
| chr4.2 | exon | 19938525 | 19938658 | 19938525 | ID=MS.gene90229.t1.exon3;Parent=MS.gene90229.t1 |
| chr4.2 | CDS | 19938525 | 19938658 | 19938525 | ID=cds.MS.gene90229.t1;Parent=MS.gene90229.t1 |
| chr4.2 | exon | 19939160 | 19939261 | 19939160 | ID=MS.gene90229.t1.exon4;Parent=MS.gene90229.t1 |
| chr4.2 | CDS | 19939160 | 19939261 | 19939160 | ID=cds.MS.gene90229.t1;Parent=MS.gene90229.t1 |
| chr4.2 | exon | 19939379 | 19939493 | 19939379 | ID=MS.gene90229.t1.exon5;Parent=MS.gene90229.t1 |
| chr4.2 | CDS | 19939379 | 19939493 | 19939379 | ID=cds.MS.gene90229.t1;Parent=MS.gene90229.t1 |
| chr4.2 | exon | 19939768 | 19939824 | 19939768 | ID=MS.gene90229.t1.exon6;Parent=MS.gene90229.t1 |
| chr4.2 | CDS | 19939768 | 19939824 | 19939768 | ID=cds.MS.gene90229.t1;Parent=MS.gene90229.t1 |
| chr4.2 | exon | 19940265 | 19940312 | 19940265 | ID=MS.gene90229.t1.exon7;Parent=MS.gene90229.t1 |
| chr4.2 | CDS | 19940265 | 19940312 | 19940265 | ID=cds.MS.gene90229.t1;Parent=MS.gene90229.t1 |
| chr4.2 | exon | 19940455 | 19940523 | 19940455 | ID=MS.gene90229.t1.exon8;Parent=MS.gene90229.t1 |
| chr4.2 | CDS | 19940455 | 19940523 | 19940455 | ID=cds.MS.gene90229.t1;Parent=MS.gene90229.t1 |
| chr4.2 | exon | 19941081 | 19941161 | 19941081 | ID=MS.gene90229.t1.exon9;Parent=MS.gene90229.t1 |
| chr4.2 | CDS | 19941081 | 19941161 | 19941081 | ID=cds.MS.gene90229.t1;Parent=MS.gene90229.t1 |
| chr4.2 | exon | 19941317 | 19941388 | 19941317 | ID=MS.gene90229.t1.exon10;Parent=MS.gene90229.t1 |
| chr4.2 | CDS | 19941317 | 19941388 | 19941317 | ID=cds.MS.gene90229.t1;Parent=MS.gene90229.t1 |
| chr4.2 | exon | 19941476 | 19941517 | 19941476 | ID=MS.gene90229.t1.exon11;Parent=MS.gene90229.t1 |
| chr4.2 | CDS | 19941476 | 19941517 | 19941476 | ID=cds.MS.gene90229.t1;Parent=MS.gene90229.t1 |
| Gene Sequence |
| Protein sequence |
