Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90353.t1 | KEH22833.1 | 86.9 | 778 | 67 | 6 | 1 | 751 | 1 | 770 | 0.00E+00 | 1130.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90353.t1 | Q01593 | 41.5 | 727 | 320 | 16 | 19 | 715 | 32 | 683 | 4.2e-80 | 300.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90353.t1 | A0A072U0Z8 | 86.9 | 778 | 67 | 6 | 1 | 751 | 1 | 770 | 0.0e+00 | 1130.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene90353.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90353.t1 | MTR_7g059330 | 92.821 | 780 | 17 | 7 | 1 | 751 | 1 | 770 | 0.0 | 1481 |
| MS.gene90353.t1 | MTR_7g083700 | 50.833 | 120 | 57 | 1 | 596 | 715 | 121 | 238 | 3.96e-31 | 124 |
| MS.gene90353.t1 | MTR_4g088605 | 43.299 | 97 | 52 | 2 | 596 | 692 | 100 | 193 | 3.15e-18 | 85.9 |
| MS.gene90353.t1 | MTR_8g470990 | 83.721 | 43 | 7 | 0 | 183 | 225 | 40 | 82 | 1.68e-17 | 79.0 |
| MS.gene90353.t1 | MTR_7g073240 | 37.500 | 104 | 61 | 2 | 601 | 704 | 121 | 220 | 1.62e-15 | 79.3 |
| MS.gene90353.t1 | MTR_3g467380 | 36.538 | 104 | 62 | 3 | 601 | 704 | 338 | 437 | 1.30e-14 | 78.6 |
| MS.gene90353.t1 | MTR_2g011940 | 33.557 | 149 | 84 | 5 | 601 | 742 | 352 | 492 | 3.69e-14 | 76.6 |
| MS.gene90353.t1 | MTR_2g011940 | 33.557 | 149 | 84 | 5 | 601 | 742 | 352 | 492 | 4.32e-14 | 76.3 |
| MS.gene90353.t1 | MTR_2g011940 | 40.449 | 89 | 50 | 2 | 601 | 689 | 343 | 428 | 6.86e-14 | 76.3 |
| MS.gene90353.t1 | MTR_4g028130 | 32.484 | 157 | 86 | 6 | 601 | 749 | 314 | 458 | 1.22e-13 | 75.1 |
| MS.gene90353.t1 | MTR_5g075410 | 37.500 | 104 | 61 | 3 | 601 | 704 | 321 | 420 | 1.24e-13 | 75.1 |
| MS.gene90353.t1 | MTR_4g028130 | 35.000 | 100 | 62 | 2 | 601 | 700 | 314 | 410 | 2.40e-13 | 74.3 |
| MS.gene90353.t1 | MTR_4g028130 | 37.079 | 89 | 53 | 2 | 601 | 689 | 314 | 399 | 3.38e-13 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90353.t1 | AT3G24650 | 45.478 | 774 | 274 | 29 | 19 | 738 | 32 | 711 | 4.04e-155 | 468 |
| MS.gene90353.t1 | AT3G26790 | 49.324 | 148 | 59 | 4 | 562 | 709 | 66 | 197 | 1.97e-36 | 140 |
| MS.gene90353.t1 | AT1G28300 | 49.593 | 123 | 59 | 2 | 596 | 717 | 165 | 285 | 9.32e-31 | 124 |
| MS.gene90353.t1 | AT2G30470 | 39.815 | 108 | 61 | 3 | 597 | 704 | 290 | 393 | 8.27e-16 | 82.4 |
| MS.gene90353.t1 | AT4G32010 | 37.000 | 100 | 60 | 2 | 601 | 700 | 285 | 381 | 2.77e-14 | 77.4 |
| MS.gene90353.t1 | AT4G32010 | 37.000 | 100 | 60 | 2 | 601 | 700 | 281 | 377 | 2.91e-14 | 77.4 |
| MS.gene90353.t1 | AT4G21550 | 37.500 | 104 | 59 | 4 | 601 | 704 | 327 | 424 | 1.66e-13 | 74.3 |
| MS.gene90353.t1 | AT4G21550 | 37.500 | 104 | 59 | 4 | 601 | 704 | 327 | 424 | 2.09e-13 | 74.3 |
| MS.gene90353.t1 | AT4G21550 | 37.500 | 104 | 59 | 4 | 601 | 704 | 327 | 424 | 2.42e-13 | 73.9 |
Find 155 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACCTCATGGTATGAATTT+TGG | 0.145459 | 7.4:+44080915 | MS.gene90353:CDS |
| CCATCTCTTGCCTCCAATTC+TGG | 0.191237 | 7.4:-44082021 | None:intergenic |
| GAAATTTAGCAGAAGAAAAT+TGG | 0.230877 | 7.4:+44079554 | MS.gene90353:CDS |
| GAAACAGAACAAGTTGGTTT+TGG | 0.246821 | 7.4:+44079532 | MS.gene90353:CDS |
| CATGGATGATGTTAACATTA+TGG | 0.261818 | 7.4:+44080011 | MS.gene90353:CDS |
| CAAAAGTGTTTGCTGTGTTT+TGG | 0.290697 | 7.4:-44080614 | None:intergenic |
| TCACTATGAAATCTCCTTCT+TGG | 0.299532 | 7.4:-44082562 | None:intergenic |
| TTTGTCATCAACTGCTTCTA+TGG | 0.302150 | 7.4:+44079918 | MS.gene90353:CDS |
| CTTCTTGGAGCATCAGATAT+TGG | 0.312901 | 7.4:+44082205 | MS.gene90353:intron |
| ACATTGGAACTTCTCGAGTT+TGG | 0.314913 | 7.4:+44082064 | MS.gene90353:CDS |
| AATTCTTATCAGTTGTTTCC+TGG | 0.316637 | 7.4:+44080957 | MS.gene90353:CDS |
| GAGTTTGGAATATGCGTTAC+AGG | 0.324294 | 7.4:+44082079 | MS.gene90353:CDS |
| AGTATTCAAGGAGATGAATT+AGG | 0.332563 | 7.4:+44080288 | MS.gene90353:CDS |
| AGAAACACATTTGCCAGAAT+TGG | 0.333835 | 7.4:+44082008 | MS.gene90353:CDS |
| TTCGTGTGTGATGGTGTAAA+TGG | 0.334610 | 7.4:+44080258 | MS.gene90353:CDS |
| GTTAACATTATGGATACTTT+TGG | 0.334842 | 7.4:+44080021 | MS.gene90353:CDS |
| TGTTTCCTGGTCCTGGTGAT+AGG | 0.335577 | 7.4:+44080970 | MS.gene90353:CDS |
| TATCAGTTGTTTCCTGGTCC+TGG | 0.347158 | 7.4:+44080963 | MS.gene90353:CDS |
| TTCCTTGGCACCTGTTGTTC+CGG | 0.349548 | 7.4:+44081232 | MS.gene90353:CDS |
| TGTTGAAGCTTATTCTTGAA+TGG | 0.366685 | 7.4:+44080478 | MS.gene90353:CDS |
| GCAAAGTGATGTGGGAAGTC+TGG | 0.373169 | 7.4:+44081868 | MS.gene90353:CDS |
| TGAAGATGAAAACCCTTTAG+TGG | 0.375000 | 7.4:+44080101 | MS.gene90353:CDS |
| TCCAATGTCTTCCATTGTAA+TGG | 0.384705 | 7.4:-44082049 | None:intergenic |
| GTAGGGCGGTCACGGTCTAC+TGG | 0.390870 | 7.4:-44081272 | None:intergenic |
| TCTAATAATGATGTTGTTGT+TGG | 0.394879 | 7.4:+44079976 | MS.gene90353:CDS |
| GTCGGCTCAGCCGGAACAAC+AGG | 0.395714 | 7.4:-44081242 | None:intergenic |
| TCGTGTGTGATGGTGTAAAT+GGG | 0.396277 | 7.4:+44080259 | MS.gene90353:CDS |
| TCTGATCCACTTGCAAGATT+AGG | 0.399738 | 7.4:+44081113 | MS.gene90353:CDS |
| TTTGATCTAACCATGATGTT+TGG | 0.403522 | 7.4:-44080662 | None:intergenic |
| GAAACAGAACCATTTGTGTA+AGG | 0.406123 | 7.4:-44080753 | None:intergenic |
| ACAAATGATTGATTGTAGTT+TGG | 0.412145 | 7.4:-44080870 | None:intergenic |
| CTTGAGTGAAATCCACTAAA+GGG | 0.414792 | 7.4:-44080113 | None:intergenic |
| TATCGGGTGCACTTCGACCC+TGG | 0.418605 | 7.4:-44081316 | None:intergenic |
| TGTTGGAATCAAATCATTCA+TGG | 0.419898 | 7.4:+44080823 | MS.gene90353:CDS |
| GTTGAAGCTTATTCTTGAAT+GGG | 0.421780 | 7.4:+44080479 | MS.gene90353:CDS |
| CTCATGCAAATCCAGGTAAC+TGG | 0.422437 | 7.4:+44081174 | MS.gene90353:CDS |
| AGATTTCATAGTGATATATT+CGG | 0.424395 | 7.4:+44082571 | MS.gene90353:CDS |
| CTTGAGGTTCCTTCTACAAA+AGG | 0.425157 | 7.4:+44081838 | MS.gene90353:CDS |
| AACCTTGAATATTCTGATGA+TGG | 0.426625 | 7.4:-44081091 | None:intergenic |
| GGAGGCTGTGTCGGCTCAGC+CGG | 0.428059 | 7.4:-44081251 | None:intergenic |
| CAACCAATTGGAGTTGGAGT+TGG | 0.429114 | 7.4:+44080717 | MS.gene90353:CDS |
| GATGACATGCATGGAAAATC+AGG | 0.429831 | 7.4:-44079670 | None:intergenic |
| GGTGACTTTGTGAAAGCTAA+TGG | 0.431864 | 7.4:+44082536 | MS.gene90353:intron |
| CAAAGTGATGTGGGAAGTCT+GGG | 0.435116 | 7.4:+44081869 | MS.gene90353:CDS |
| AGGTGGGACAGCAGCTTCCT+TGG | 0.437818 | 7.4:+44081217 | MS.gene90353:CDS |
| AATAATGATGTTGTTGTTGG+TGG | 0.439367 | 7.4:+44079979 | MS.gene90353:CDS |
| TGTTGGTGGTGGTGATTGCA+TGG | 0.439533 | 7.4:+44079993 | MS.gene90353:CDS |
| AGATTAGGTGGTGGAAAAGA+AGG | 0.440924 | 7.4:+44080444 | MS.gene90353:CDS |
| TGACCATGATGATAATCTAA+TGG | 0.440958 | 7.4:-44079883 | None:intergenic |
| AACCATCATCAGAATATTCA+AGG | 0.441107 | 7.4:+44081089 | MS.gene90353:CDS |
| AATCCAACTCCAACTCCAAT+TGG | 0.447804 | 7.4:-44080720 | None:intergenic |
| GAAAGTGCTGCTAGGAGATT+AGG | 0.448685 | 7.4:+44080429 | MS.gene90353:CDS |
| GTTGCTGATCCTTACACAAA+TGG | 0.448875 | 7.4:+44080744 | MS.gene90353:CDS |
| ATCCAGGTAACTGGATGTAT+TGG | 0.449670 | 7.4:+44081183 | MS.gene90353:CDS |
| CTAGTCATCTTCAAAACAAA+AGG | 0.455119 | 7.4:+44080508 | MS.gene90353:CDS |
| GCAGTTGATGACAAAGTTGT+TGG | 0.458355 | 7.4:-44079910 | None:intergenic |
| GAACTCTGTGTCTGCATGGT+AGG | 0.458673 | 7.4:-44081290 | None:intergenic |
| TGTTGAGGAACAAGATTTGA+AGG | 0.459544 | 7.4:-44080564 | None:intergenic |
| TTGCTGCATTATTCCCATGC+TGG | 0.461065 | 7.4:-44083120 | None:intergenic |
| TCTGCATGGTAGGGCGGTCA+CGG | 0.463598 | 7.4:-44081280 | None:intergenic |
| CAACAACAGCAACAAGATCT+TGG | 0.467069 | 7.4:+44079949 | MS.gene90353:CDS |
| TTAGTAGCAGCAGGTTGGTA+AGG | 0.468267 | 7.4:-44080789 | None:intergenic |
| GGAACTGCAGTGGATAATAA+TGG | 0.468390 | 7.4:+44083151 | MS.gene90353:CDS |
| AATGGGGAAGAGAGTATTCA+AGG | 0.474011 | 7.4:+44080276 | MS.gene90353:CDS |
| TGTAAGTGATGAAATGAGTA+TGG | 0.477564 | 7.4:+44080323 | MS.gene90353:CDS |
| GGTGATAGGTTGATGAGGTT+AGG | 0.481801 | 7.4:+44080984 | MS.gene90353:CDS |
| TCCTCGATATTCACTTGTTG+AGG | 0.482903 | 7.4:-44080219 | None:intergenic |
| AACACATTTGCCAGAATTGG+AGG | 0.485525 | 7.4:+44082011 | MS.gene90353:CDS |
| GGCGGTTTATGTCTCATCAT+AGG | 0.485732 | 7.4:+44081054 | MS.gene90353:CDS |
| TCTTGAGTGAAATCCACTAA+AGG | 0.489448 | 7.4:-44080114 | None:intergenic |
| TGAGATCTTGTTATGGAGTG+TGG | 0.491117 | 7.4:+44079481 | None:intergenic |
| TGATATTCATTAGTAGCAGC+AGG | 0.496130 | 7.4:-44080798 | None:intergenic |
| TCCACAAACCTGTCTCCTAT+CGG | 0.498147 | 7.4:-44081333 | None:intergenic |
| CCACAAACCTGTCTCCTATC+GGG | 0.499467 | 7.4:-44081332 | None:intergenic |
| TCCATTACAATGGAAGACAT+TGG | 0.518362 | 7.4:+44082048 | MS.gene90353:CDS |
| CCAGAATTGGAGGCAAGAGA+TGG | 0.521085 | 7.4:+44082021 | MS.gene90353:CDS |
| TGCCAATACATCCAGTTACC+TGG | 0.522443 | 7.4:-44081185 | None:intergenic |
| AATGATGTTGTTGTTGGTGG+TGG | 0.522768 | 7.4:+44079982 | MS.gene90353:CDS |
| TTTAGATCTGCATGCAAAGT+TGG | 0.524550 | 7.4:+44079504 | MS.gene90353:CDS |
| CGGTCTACTGGAGGCTGTGT+CGG | 0.525844 | 7.4:-44081260 | None:intergenic |
| GTGTCTCGGCGAATGATTTG+AGG | 0.525939 | 7.4:+44080379 | MS.gene90353:CDS |
| GATTAGGTGGTGGAAAAGAA+GGG | 0.527131 | 7.4:+44080445 | MS.gene90353:CDS |
| CATCCATTAGATTATCATCA+TGG | 0.529410 | 7.4:+44079880 | MS.gene90353:CDS |
| AACTCTGTGTCTGCATGGTA+GGG | 0.531617 | 7.4:-44081289 | None:intergenic |
| TTGAAACACGCGTTCGACTC+AGG | 0.532743 | 7.4:-44080639 | None:intergenic |
| AATAATGCAGCAAATTCAGC+TGG | 0.533401 | 7.4:+44083130 | MS.gene90353:CDS |
| GTTGGAATCAAATCATTCAT+GGG | 0.534566 | 7.4:+44080824 | MS.gene90353:CDS |
| TGCACCAATGTTGCTGCTGG+TGG | 0.534906 | 7.4:+44081149 | MS.gene90353:CDS |
| AGAAGAGGATGGCTCGGCAA+CGG | 0.537506 | 7.4:+44081033 | MS.gene90353:CDS |
| AAGTGCACCCGATAGGAGAC+AGG | 0.539885 | 7.4:+44081325 | MS.gene90353:CDS |
| GTGAATGAAACAGAACAAGT+TGG | 0.541250 | 7.4:+44079526 | MS.gene90353:CDS |
| AGGTATTATTGTGTTAATGT+TGG | 0.545897 | 7.4:-44080544 | None:intergenic |
| GGTGGTTCTCATGCAAATCC+AGG | 0.547601 | 7.4:+44081167 | MS.gene90353:CDS |
| AGATGGAATTTCCATTACAA+TGG | 0.552928 | 7.4:+44082038 | MS.gene90353:CDS |
| CGTGTTTCAACCAAACATCA+TGG | 0.556011 | 7.4:+44080652 | MS.gene90353:CDS |
| TAGTAGCAGCAGGTTGGTAA+GGG | 0.556194 | 7.4:-44080788 | None:intergenic |
| ATTGGTTGTGAAAATTGTTG+TGG | 0.556322 | 7.4:-44080702 | None:intergenic |
| ATTGGCCAAACAACAAAAGC+AGG | 0.559048 | 7.4:+44082223 | MS.gene90353:CDS |
| TTTGTGATACAGATGATAAG+AGG | 0.559171 | 7.4:+44083031 | MS.gene90353:intron |
| GCAGACACAGAGTTCTCACC+AGG | 0.559551 | 7.4:+44081298 | MS.gene90353:CDS |
| AACAATGTGCTACAACCTCA+TGG | 0.560848 | 7.4:+44080903 | MS.gene90353:CDS |
| ATGCATGGAAAATCAGGTAA+AGG | 0.563307 | 7.4:-44079664 | None:intergenic |
| AGCCGGAACAACAGGTGCCA+AGG | 0.565713 | 7.4:-44081234 | None:intergenic |
| GTGAGAACTCTGTGTCTGCA+TGG | 0.567470 | 7.4:-44081294 | None:intergenic |
| CAAAAGAAGCTAGAAAGAAG+AGG | 0.568012 | 7.4:+44081018 | MS.gene90353:CDS |
| GCAACAAGTTCAAGTGCAAG+AGG | 0.568536 | 7.4:+44080137 | MS.gene90353:CDS |
| CTATCATCATGCACTATCAT+CGG | 0.568658 | 7.4:-44080186 | None:intergenic |
| ATCTAATAAAGATAGTGTCT+CGG | 0.571024 | 7.4:+44080365 | MS.gene90353:CDS |
| CGACAATCGAAAGTGCTGCT+AGG | 0.571538 | 7.4:+44080421 | MS.gene90353:CDS |
| TCTTGAAACTGTTGTTGTTG+AGG | 0.572652 | 7.4:-44080579 | None:intergenic |
| GGGCGGTCACGGTCTACTGG+AGG | 0.573786 | 7.4:-44081269 | None:intergenic |
| CATGGAAAATCAGGTAAAGG+TGG | 0.574020 | 7.4:-44079661 | None:intergenic |
| CAACAAGTTCAAGTGCAAGA+GGG | 0.577061 | 7.4:+44080138 | MS.gene90353:CDS |
| CTAGAAAGAAGAGGATGGCT+CGG | 0.580461 | 7.4:+44081027 | MS.gene90353:CDS |
| AGAACCACCAGCAGCAACAT+TGG | 0.585844 | 7.4:-44081153 | None:intergenic |
| AATACTACAAATGATCAAGA+TGG | 0.586104 | 7.4:+44079583 | MS.gene90353:CDS |
| AATTGCACCAATGTTGCTGC+TGG | 0.589434 | 7.4:+44081146 | MS.gene90353:CDS |
| CCAGCACCTAATCTTGCAAG+TGG | 0.590776 | 7.4:-44081119 | None:intergenic |
| AAAGCTAATGGACTCCAAGA+AGG | 0.591042 | 7.4:+44082548 | MS.gene90353:CDS |
| GGTTGTGAAAATTGTTGTGG+AGG | 0.599097 | 7.4:-44080699 | None:intergenic |
| ATTCATTAGTAGCAGCAGGT+TGG | 0.599869 | 7.4:-44080794 | None:intergenic |
| TACTAATGAATATCACATGT+TGG | 0.601457 | 7.4:+44080806 | MS.gene90353:CDS |
| AACCTCATCAACCTATCACC+AGG | 0.601661 | 7.4:-44080981 | None:intergenic |
| GATGTTGAAGTAGATCATCA+AGG | 0.604610 | 7.4:+44079829 | MS.gene90353:intron |
| GGAAGCCTGAAAAGAACTTG+AGG | 0.606267 | 7.4:+44081822 | MS.gene90353:CDS |
| GTTGATGACAAAGTTGTTGG+AGG | 0.610564 | 7.4:-44079907 | None:intergenic |
| AGAAGCTAGAAAGAAGAGGA+TGG | 0.610747 | 7.4:+44081022 | MS.gene90353:CDS |
| AGGGTCGAAGTGCACCCGAT+AGG | 0.612569 | 7.4:+44081318 | MS.gene90353:CDS |
| AACAAGTTCAAGTGCAAGAG+GGG | 0.612587 | 7.4:+44080139 | MS.gene90353:CDS |
| CGTGTGTGATGGTGTAAATG+GGG | 0.613786 | 7.4:+44080260 | MS.gene90353:CDS |
| AGAGGATGGCTCGGCAACGG+CGG | 0.616260 | 7.4:+44081036 | MS.gene90353:CDS |
| ATGTATTGGCAGACTATGAC+AGG | 0.620175 | 7.4:+44081197 | MS.gene90353:CDS |
| TGTAGTTGAAGTACATGCAA+TGG | 0.622529 | 7.4:-44079737 | None:intergenic |
| TCTGTGTCTGCATGGTAGGG+CGG | 0.631104 | 7.4:-44081286 | None:intergenic |
| ATCAACCTATCACCAGGACC+AGG | 0.632824 | 7.4:-44080975 | None:intergenic |
| GATGATGATGATGACATGCA+TGG | 0.634968 | 7.4:-44079679 | None:intergenic |
| CCACTTGCAAGATTAGGTGC+TGG | 0.635600 | 7.4:+44081119 | MS.gene90353:CDS |
| TGTTGTGGAGGTACAATGAG+AGG | 0.642005 | 7.4:-44080687 | None:intergenic |
| TGATAAGAGGAGTTAAAGTG+AGG | 0.643871 | 7.4:+44083044 | MS.gene90353:CDS |
| ACAACAAGGAACAAAACCAG+AGG | 0.652056 | 7.4:+44083069 | MS.gene90353:CDS |
| AAATTCAGCTGGAACTGCAG+TGG | 0.653260 | 7.4:+44083141 | MS.gene90353:CDS |
| GTCCTGGTGATAGGTTGATG+AGG | 0.656286 | 7.4:+44080979 | MS.gene90353:CDS |
| AGTGCTGCTAGGAGATTAGG+TGG | 0.658105 | 7.4:+44080432 | MS.gene90353:CDS |
| TATTGGCAGACTATGACAGG+TGG | 0.659210 | 7.4:+44081200 | MS.gene90353:CDS |
| GCTGCTAGGAGATTAGGTGG+TGG | 0.661001 | 7.4:+44080435 | MS.gene90353:CDS |
| ATTGGCAGACTATGACAGGT+GGG | 0.666700 | 7.4:+44081201 | MS.gene90353:CDS |
| ATGTACTTGCTAGAGAACAC+TGG | 0.672784 | 7.4:+44082246 | MS.gene90353:CDS |
| CCTCCAAAATTCATACCATG+AGG | 0.677157 | 7.4:-44080918 | None:intergenic |
| TTGGAATCAAATCATTCATG+GGG | 0.679978 | 7.4:+44080825 | MS.gene90353:CDS |
| ACCTCAACAAGTGAATATCG+AGG | 0.687124 | 7.4:+44080218 | MS.gene90353:CDS |
| GATGAATTAGGTGCATGTGA+TGG | 0.687203 | 7.4:+44080300 | MS.gene90353:CDS |
| GTTAAAGTGAGGCAACAACA+AGG | 0.696223 | 7.4:+44083055 | MS.gene90353:CDS |
| ATATATTCGGATGTGAAGTG+TGG | 0.733516 | 7.4:+44082584 | MS.gene90353:CDS |
| AAAGTGATGTGGGAAGTCTG+GGG | 0.734540 | 7.4:+44081870 | MS.gene90353:CDS |
| CAGACACAGAGTTCTCACCA+GGG | 0.787957 | 7.4:+44081299 | MS.gene90353:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGTATAAGTTTTAAAATA+TGG | + | chr7.4:44081472-44081491 | MS.gene90353:intron | 10.0% |
| !!! | TTTTTTTTACATAATTTTCA+TGG | + | chr7.4:44082644-44082663 | MS.gene90353:intron | 10.0% |
| !! | AATAATCTGACAATTATAAT+TGG | - | chr7.4:44081730-44081749 | None:intergenic | 15.0% |
| !! | AGAATGTAAAATATGAAAAT+TGG | - | chr7.4:44082798-44082817 | None:intergenic | 15.0% |
| !! | TAAAAAAGTTGAGAATTAAT+TGG | + | chr7.4:44082997-44083016 | MS.gene90353:intron | 15.0% |
| !!! | CTTTAAATGGTAAATTTTTA+TGG | - | chr7.4:44082446-44082465 | None:intergenic | 15.0% |
| !!! | TGAAAATCAATAATTACTTT+TGG | - | chr7.4:44081908-44081927 | None:intergenic | 15.0% |
| !! | AAAAAAAAAATGATAAGGGA+AGG | - | chr7.4:44082624-44082643 | None:intergenic | 20.0% |
| !! | AAAAGGAATACATTATGAAA+AGG | - | chr7.4:44082507-44082526 | None:intergenic | 20.0% |
| !! | AAAGGAATACATTATGAAAA+GGG | - | chr7.4:44082506-44082525 | None:intergenic | 20.0% |
| !! | ACAATTCAATTAGTTGAAAT+GGG | - | chr7.4:44082743-44082762 | None:intergenic | 20.0% |
| !! | AGATTTCATAGTGATATATT+CGG | + | chr7.4:44082571-44082590 | MS.gene90353:CDS | 20.0% |
| !!! | TTACATAATTTTCATGGATT+TGG | + | chr7.4:44082650-44082669 | MS.gene90353:intron | 20.0% |
| !!! | TTTTTGTTTATTTCCCTTTT+CGG | + | chr7.4:44082311-44082330 | MS.gene90353:intron | 20.0% |
| ! | AAAAGTTGAGAATTAATTGG+TGG | + | chr7.4:44083000-44083019 | MS.gene90353:intron | 25.0% |
| ! | AAAGTTGAGAATTAATTGGT+GGG | + | chr7.4:44083001-44083020 | MS.gene90353:intron | 25.0% |
| ! | AATACTACAAATGATCAAGA+TGG | + | chr7.4:44079583-44079602 | MS.gene90353:CDS | 25.0% |
| ! | ACAAATGATTGATTGTAGTT+TGG | - | chr7.4:44080873-44080892 | None:intergenic | 25.0% |
| ! | AGGTATTATTGTGTTAATGT+TGG | - | chr7.4:44080547-44080566 | None:intergenic | 25.0% |
| ! | ATCTAATAAAGATAGTGTCT+CGG | + | chr7.4:44080365-44080384 | MS.gene90353:CDS | 25.0% |
| ! | CACAATTCAATTAGTTGAAA+TGG | - | chr7.4:44082744-44082763 | None:intergenic | 25.0% |
| ! | GAAATTTAGCAGAAGAAAAT+TGG | + | chr7.4:44079554-44079573 | MS.gene90353:CDS | 25.0% |
| ! | TACTAATGAATATCACATGT+TGG | + | chr7.4:44080806-44080825 | MS.gene90353:CDS | 25.0% |
| ! | TCTAATAATGATGTTGTTGT+TGG | + | chr7.4:44079976-44079995 | MS.gene90353:CDS | 25.0% |
| !! | GTTAACATTATGGATACTTT+TGG | + | chr7.4:44080021-44080040 | MS.gene90353:CDS | 25.0% |
| !! | TCTCTTTGATTATTTCTTCT+TGG | + | chr7.4:44082190-44082209 | MS.gene90353:intron | 25.0% |
| !! | TGTATTCCTTTTCATTTTGT+AGG | + | chr7.4:44082515-44082534 | MS.gene90353:intron | 25.0% |
| !!! | GTTGATGTTTTTGATTGATA+GGG | + | chr7.4:44081797-44081816 | MS.gene90353:intron | 25.0% |
| !!! | TGTTGATGTTTTTGATTGAT+AGG | + | chr7.4:44081796-44081815 | MS.gene90353:intron | 25.0% |
| !!! | TTTTGTTTATTTCCCTTTTC+GGG | + | chr7.4:44082312-44082331 | MS.gene90353:intron | 25.0% |
| AACCATCATCAGAATATTCA+AGG | + | chr7.4:44081089-44081108 | MS.gene90353:CDS | 30.0% | |
| AACCTTGAATATTCTGATGA+TGG | - | chr7.4:44081094-44081113 | None:intergenic | 30.0% | |
| AAGTCACCTACAAAATGAAA+AGG | - | chr7.4:44082524-44082543 | None:intergenic | 30.0% | |
| AAGTTGAGAATTAATTGGTG+GGG | + | chr7.4:44083002-44083021 | MS.gene90353:intron | 30.0% | |
| AGATGGAATTTCCATTACAA+TGG | + | chr7.4:44082038-44082057 | MS.gene90353:CDS | 30.0% | |
| AGTAACATGCATCAAAAACA+TGG | + | chr7.4:44079856-44079875 | MS.gene90353:CDS | 30.0% | |
| AGTATTCAAGGAGATGAATT+AGG | + | chr7.4:44080288-44080307 | MS.gene90353:CDS | 30.0% | |
| ATAATTGGTCGATCGAATAA+TGG | - | chr7.4:44081715-44081734 | None:intergenic | 30.0% | |
| ATTGCAAAAACATCAGAAAG+AGG | + | chr7.4:44081984-44082003 | MS.gene90353:intron | 30.0% | |
| ATTGGTTGTGAAAATTGTTG+TGG | - | chr7.4:44080705-44080724 | None:intergenic | 30.0% | |
| CATATTTATCCATTTGTCTG+CGG | + | chr7.4:44081570-44081589 | MS.gene90353:intron | 30.0% | |
| CATCCATTAGATTATCATCA+TGG | + | chr7.4:44079880-44079899 | MS.gene90353:CDS | 30.0% | |
| CATGGATGATGTTAACATTA+TGG | + | chr7.4:44080011-44080030 | MS.gene90353:CDS | 30.0% | |
| CATTATTGTAACCACAATTG+TGG | + | chr7.4:44081617-44081636 | MS.gene90353:intron | 30.0% | |
| CTAGTCATCTTCAAAACAAA+AGG | + | chr7.4:44080508-44080527 | MS.gene90353:CDS | 30.0% | |
| GAGTCATTCTTCTTATTCAT+TGG | + | chr7.4:44082270-44082289 | MS.gene90353:intron | 30.0% | |
| GATAAATATGACCACAATTG+TGG | - | chr7.4:44081560-44081579 | None:intergenic | 30.0% | |
| GTTGAAGCTTATTCTTGAAT+GGG | + | chr7.4:44080479-44080498 | MS.gene90353:CDS | 30.0% | |
| GTTGGAATCAAATCATTCAT+GGG | + | chr7.4:44080824-44080843 | MS.gene90353:CDS | 30.0% | |
| GTTTACTGTTGCAATTTAGA+CGG | - | chr7.4:44082947-44082966 | None:intergenic | 30.0% | |
| TGACCATGATGATAATCTAA+TGG | - | chr7.4:44079886-44079905 | None:intergenic | 30.0% | |
| TGTAAGTGATGAAATGAGTA+TGG | + | chr7.4:44080323-44080342 | MS.gene90353:CDS | 30.0% | |
| TGTTGAAGCTTATTCTTGAA+TGG | + | chr7.4:44080478-44080497 | MS.gene90353:CDS | 30.0% | |
| TGTTGCAAACCATTATATTG+CGG | - | chr7.4:44081670-44081689 | None:intergenic | 30.0% | |
| TGTTGGAATCAAATCATTCA+TGG | + | chr7.4:44080823-44080842 | MS.gene90353:CDS | 30.0% | |
| TTGGAATCAAATCATTCATG+GGG | + | chr7.4:44080825-44080844 | MS.gene90353:CDS | 30.0% | |
| TTTGATCTAACCATGATGTT+TGG | - | chr7.4:44080665-44080684 | None:intergenic | 30.0% | |
| TTTGTGATACAGATGATAAG+AGG | + | chr7.4:44083031-44083050 | MS.gene90353:intron | 30.0% | |
| ! | AATAATGATGTTGTTGTTGG+TGG | + | chr7.4:44079979-44079998 | MS.gene90353:CDS | 30.0% |
| ! | AATTCTTATCAGTTGTTTCC+TGG | + | chr7.4:44080957-44080976 | MS.gene90353:CDS | 30.0% |
| ! | CAACAATTTTCACAACCAAT+TGG | + | chr7.4:44080705-44080724 | MS.gene90353:CDS | 30.0% |
| ! | TGAAATGAGTATGGTTTTCT+TGG | + | chr7.4:44080332-44080351 | MS.gene90353:CDS | 30.0% |
| !! | ATGTTTTTGATTGATAGGGT+TGG | + | chr7.4:44081801-44081820 | MS.gene90353:intron | 30.0% |
| !! | CATTTTGAAAAATCGATGCA+GGG | - | chr7.4:44080083-44080102 | None:intergenic | 30.0% |
| !! | TATGGATACTTTTGGTTACA+TGG | + | chr7.4:44080029-44080048 | MS.gene90353:CDS | 30.0% |
| !! | TCATTTTGAAAAATCGATGC+AGG | - | chr7.4:44080084-44080103 | None:intergenic | 30.0% |
| !! | TCTTCTTATTCATTGGTCTT+TGG | + | chr7.4:44082277-44082296 | MS.gene90353:intron | 30.0% |
| !!! | CTGCAATATAATGGTTTTAG+AGG | + | chr7.4:44081514-44081533 | MS.gene90353:intron | 30.0% |
| !!! | TGGTCTGGTTTTTAAAACTT+CGG | - | chr7.4:44082713-44082732 | None:intergenic | 30.0% |
| AAATCACAGAAAAACCAGCA+TGG | + | chr7.4:44083106-44083125 | MS.gene90353:CDS | 35.0% | |
| AATAATGCAGCAAATTCAGC+TGG | + | chr7.4:44083130-44083149 | MS.gene90353:CDS | 35.0% | |
| AATCACAGAAAAACCAGCAT+GGG | + | chr7.4:44083107-44083126 | MS.gene90353:CDS | 35.0% | |
| AGAAACACATTTGCCAGAAT+TGG | + | chr7.4:44082008-44082027 | MS.gene90353:CDS | 35.0% | |
| AGTTTGTGTAATCAGTGCAT+TGG | - | chr7.4:44082422-44082441 | None:intergenic | 35.0% | |
| ATATATTCGGATGTGAAGTG+TGG | + | chr7.4:44082584-44082603 | MS.gene90353:CDS | 35.0% | |
| ATGCATGGAAAATCAGGTAA+AGG | - | chr7.4:44079667-44079686 | None:intergenic | 35.0% | |
| CAAAAGAAGCTAGAAAGAAG+AGG | + | chr7.4:44081018-44081037 | MS.gene90353:CDS | 35.0% | |
| CAATTGTGGCTGCAATATAA+TGG | + | chr7.4:44081505-44081524 | MS.gene90353:intron | 35.0% | |
| CTATCATCATGCACTATCAT+CGG | - | chr7.4:44080189-44080208 | None:intergenic | 35.0% | |
| CTTGAGTGAAATCCACTAAA+GGG | - | chr7.4:44080116-44080135 | None:intergenic | 35.0% | |
| GAAACAGAACCATTTGTGTA+AGG | - | chr7.4:44080756-44080775 | None:intergenic | 35.0% | |
| GATAAATACGACCACAATTG+TGG | - | chr7.4:44081631-44081650 | None:intergenic | 35.0% | |
| GATCTCAATTCAATTGCACT+GGG | - | chr7.4:44082687-44082706 | None:intergenic | 35.0% | |
| GATGTTGAAGTAGATCATCA+AGG | + | chr7.4:44079829-44079848 | MS.gene90353:intron | 35.0% | |
| GTGAATGAAACAGAACAAGT+TGG | + | chr7.4:44079526-44079545 | MS.gene90353:CDS | 35.0% | |
| TAATTGAATTGTGCATCCTC+CGG | + | chr7.4:44082751-44082770 | MS.gene90353:intron | 35.0% | |
| TCACTATGAAATCTCCTTCT+TGG | - | chr7.4:44082565-44082584 | None:intergenic | 35.0% | |
| TCCAATGTCTTCCATTGTAA+TGG | - | chr7.4:44082052-44082071 | None:intergenic | 35.0% | |
| TCCATTACAATGGAAGACAT+TGG | + | chr7.4:44082048-44082067 | MS.gene90353:CDS | 35.0% | |
| TCGATTCAACCAATTAACTG+TGG | + | chr7.4:44082878-44082897 | MS.gene90353:intron | 35.0% | |
| TCTTGAGTGAAATCCACTAA+AGG | - | chr7.4:44080117-44080136 | None:intergenic | 35.0% | |
| TGAAGATGAAAACCCTTTAG+TGG | + | chr7.4:44080101-44080120 | MS.gene90353:CDS | 35.0% | |
| TGATAAGAGGAGTTAAAGTG+AGG | + | chr7.4:44083044-44083063 | MS.gene90353:CDS | 35.0% | |
| TGATATTCATTAGTAGCAGC+AGG | - | chr7.4:44080801-44080820 | None:intergenic | 35.0% | |
| TGATCTCAATTCAATTGCAC+TGG | - | chr7.4:44082688-44082707 | None:intergenic | 35.0% | |
| TGTAGTTGAAGTACATGCAA+TGG | - | chr7.4:44079740-44079759 | None:intergenic | 35.0% | |
| TGTTGAGGAACAAGATTTGA+AGG | - | chr7.4:44080567-44080586 | None:intergenic | 35.0% | |
| TTATATTGCAGCCACAATTG+CGG | - | chr7.4:44081505-44081524 | None:intergenic | 35.0% | |
| TTTAGATCTGCATGCAAAGT+TGG | + | chr7.4:44079504-44079523 | MS.gene90353:CDS | 35.0% | |
| TTTGTCATCAACTGCTTCTA+TGG | + | chr7.4:44079918-44079937 | MS.gene90353:CDS | 35.0% | |
| ! | CAACCTCATGGTATGAATTT+TGG | + | chr7.4:44080915-44080934 | MS.gene90353:CDS | 35.0% |
| ! | CACTGGTTAAGGACTTTAAA+TGG | - | chr7.4:44082459-44082478 | None:intergenic | 35.0% |
| ! | GATCAAGATGGTGATCTTTT+AGG | + | chr7.4:44079595-44079614 | MS.gene90353:CDS | 35.0% |
| ! | GCTTCAAAACCTTTTGTAGA+AGG | - | chr7.4:44081850-44081869 | None:intergenic | 35.0% |
| ! | GTACATGCAATGGTTTTCAA+TGG | - | chr7.4:44079730-44079749 | None:intergenic | 35.0% |
| ! | TCAATTAGTTGAAATGGGCT+TGG | - | chr7.4:44082738-44082757 | None:intergenic | 35.0% |
| ! | TCTTGAAACTGTTGTTGTTG+AGG | - | chr7.4:44080582-44080601 | None:intergenic | 35.0% |
| ! | TTTTCACAACCAATTGGAGT+TGG | + | chr7.4:44080711-44080730 | MS.gene90353:CDS | 35.0% |
| !! | AAATTGGTTTGAACCAACCT+CGG | - | chr7.4:44082782-44082801 | None:intergenic | 35.0% |
| !! | GGTATGAATTTTGGAGGTTA+TGG | + | chr7.4:44080924-44080943 | MS.gene90353:CDS | 35.0% |
| !!! | CAAAAGTGTTTGCTGTGTTT+TGG | - | chr7.4:44080617-44080636 | None:intergenic | 35.0% |
| !!! | GAAACAGAACAAGTTGGTTT+TGG | + | chr7.4:44079532-44079551 | MS.gene90353:CDS | 35.0% |
| !!! | GTTTTGAAGCAAAGTGATGT+GGG | + | chr7.4:44081860-44081879 | MS.gene90353:CDS | 35.0% |
| !!! | TACATCCTGCTTTTGTTGTT+TGG | - | chr7.4:44082231-44082250 | None:intergenic | 35.0% |
| !!! | TTTTTTCGCTTTGGTGAAGA+TGG | - | chr7.4:44083181-44083200 | None:intergenic | 35.0% |
| AAACCAGAGGCAAAAAAAGC+AGG | + | chr7.4:44083082-44083101 | MS.gene90353:CDS | 40.0% | |
| AACAAGTTCAAGTGCAAGAG+GGG | + | chr7.4:44080139-44080158 | MS.gene90353:CDS | 40.0% | |
| AACAATGTGCTACAACCTCA+TGG | + | chr7.4:44080903-44080922 | MS.gene90353:CDS | 40.0% | |
| AACACATTTGCCAGAATTGG+AGG | + | chr7.4:44082011-44082030 | MS.gene90353:CDS | 40.0% | |
| AATCCAACTCCAACTCCAAT+TGG | - | chr7.4:44080723-44080742 | None:intergenic | 40.0% | |
| ACAACAAGGAACAAAACCAG+AGG | + | chr7.4:44083069-44083088 | MS.gene90353:CDS | 40.0% | |
| ACATTGGAACTTCTCGAGTT+TGG | + | chr7.4:44082064-44082083 | MS.gene90353:CDS | 40.0% | |
| ACCTCAACAAGTGAATATCG+AGG | + | chr7.4:44080218-44080237 | MS.gene90353:CDS | 40.0% | |
| ACTGTTGCAATTTAGACGGT+TGG | - | chr7.4:44082943-44082962 | None:intergenic | 40.0% | |
| AGAAGCTAGAAAGAAGAGGA+TGG | + | chr7.4:44081022-44081041 | MS.gene90353:CDS | 40.0% | |
| ATCCAGGTAACTGGATGTAT+TGG | + | chr7.4:44081183-44081202 | MS.gene90353:CDS | 40.0% | |
| ATCCATTTGTCTGCGGATAT+CGG | + | chr7.4:44081577-44081596 | MS.gene90353:intron | 40.0% | |
| ATTCAATTGCACTGGGAACT+AGG | - | chr7.4:44082680-44082699 | None:intergenic | 40.0% | |
| ATTCATTAGTAGCAGCAGGT+TGG | - | chr7.4:44080797-44080816 | None:intergenic | 40.0% | |
| ATTGGCCAAACAACAAAAGC+AGG | + | chr7.4:44082223-44082242 | MS.gene90353:CDS | 40.0% | |
| CAACAACAGCAACAAGATCT+TGG | + | chr7.4:44079949-44079968 | MS.gene90353:CDS | 40.0% | |
| CAACAAGTTCAAGTGCAAGA+GGG | + | chr7.4:44080138-44080157 | MS.gene90353:CDS | 40.0% | |
| CATGGAAAATCAGGTAAAGG+TGG | - | chr7.4:44079664-44079683 | None:intergenic | 40.0% | |
| CCTCCAAAATTCATACCATG+AGG | - | chr7.4:44080921-44080940 | None:intergenic | 40.0% | |
| CGTGTTTCAACCAAACATCA+TGG | + | chr7.4:44080652-44080671 | MS.gene90353:CDS | 40.0% | |
| CTGCAGATACCGCAATATAA+TGG | + | chr7.4:44081658-44081677 | MS.gene90353:intron | 40.0% | |
| CTTGAGGTTCCTTCTACAAA+AGG | + | chr7.4:44081838-44081857 | MS.gene90353:CDS | 40.0% | |
| GATGAATTAGGTGCATGTGA+TGG | + | chr7.4:44080300-44080319 | MS.gene90353:CDS | 40.0% | |
| GATGACATGCATGGAAAATC+AGG | - | chr7.4:44079673-44079692 | None:intergenic | 40.0% | |
| GGAACTGCAGTGGATAATAA+TGG | + | chr7.4:44083151-44083170 | MS.gene90353:CDS | 40.0% | |
| GGTGACTTTGTGAAAGCTAA+TGG | + | chr7.4:44082536-44082555 | MS.gene90353:intron | 40.0% | |
| GGTTGTGAAAATTGTTGTGG+AGG | - | chr7.4:44080702-44080721 | None:intergenic | 40.0% | |
| GTTAAAGTGAGGCAACAACA+AGG | + | chr7.4:44083055-44083074 | MS.gene90353:CDS | 40.0% | |
| GTTGCTGATCCTTACACAAA+TGG | + | chr7.4:44080744-44080763 | MS.gene90353:CDS | 40.0% | |
| TCAACCATGGTTGAACAAGA+CGG | - | chr7.4:44082857-44082876 | None:intergenic | 40.0% | |
| TCGTTAACAAGACCCGAAAA+GGG | - | chr7.4:44082327-44082346 | None:intergenic | 40.0% | |
| TCTGATCCACTTGCAAGATT+AGG | + | chr7.4:44081113-44081132 | MS.gene90353:CDS | 40.0% | |
| ! | AATGATGTTGTTGTTGGTGG+TGG | + | chr7.4:44079982-44080001 | MS.gene90353:CDS | 40.0% |
| ! | AGAACAAACGACTCGAGTTT+TGG | - | chr7.4:44082916-44082935 | None:intergenic | 40.0% |
| ! | AGGAACCTCAAGTTCTTTTC+AGG | - | chr7.4:44081830-44081849 | None:intergenic | 40.0% |
| ! | ATGTACTTGCTAGAGAACAC+TGG | + | chr7.4:44082246-44082265 | MS.gene90353:CDS | 40.0% |
| ! | ATGTATTGGCAGACTATGAC+AGG | + | chr7.4:44081197-44081216 | MS.gene90353:CDS | 40.0% |
| ! | CCTCATGGTATGAATTTTGG+AGG | + | chr7.4:44080918-44080937 | MS.gene90353:CDS | 40.0% |
| ! | CTAGCTTCTTTTGTAGCAGA+AGG | - | chr7.4:44081011-44081030 | None:intergenic | 40.0% |
| ! | CTTCTTGGAGCATCAGATAT+TGG | + | chr7.4:44082205-44082224 | MS.gene90353:intron | 40.0% |
| ! | GAGTTTGGAATATGCGTTAC+AGG | + | chr7.4:44082079-44082098 | MS.gene90353:CDS | 40.0% |
| ! | GATGATGATGATGACATGCA+TGG | - | chr7.4:44079682-44079701 | None:intergenic | 40.0% |
| ! | TAGTTGAAATGGGCTTGGTT+TGG | - | chr7.4:44082733-44082752 | None:intergenic | 40.0% |
| ! | TCCTCGATATTCACTTGTTG+AGG | - | chr7.4:44080222-44080241 | None:intergenic | 40.0% |
| ! | TCGTGTGTGATGGTGTAAAT+GGG | + | chr7.4:44080259-44080278 | MS.gene90353:CDS | 40.0% |
| ! | TGAGTATGGTTTTCTTGGAG+TGG | + | chr7.4:44080337-44080356 | MS.gene90353:CDS | 40.0% |
| ! | TGGTTGAATCGATTCAACCA+TGG | - | chr7.4:44082889-44082870 | None:intergenic | 40.0% |
| ! | TTCGTGTGTGATGGTGTAAA+TGG | + | chr7.4:44080258-44080277 | MS.gene90353:CDS | 40.0% |
| !! | AAAGCTAATGGACTCCAAGA+AGG | + | chr7.4:44082548-44082567 | MS.gene90353:CDS | 40.0% |
| !! | AATGGGGAAGAGAGTATTCA+AGG | + | chr7.4:44080276-44080295 | MS.gene90353:CDS | 40.0% |
| !! | AGATTAGGTGGTGGAAAAGA+AGG | + | chr7.4:44080444-44080463 | MS.gene90353:CDS | 40.0% |
| !! | GATTAGGTGGTGGAAAAGAA+GGG | + | chr7.4:44080445-44080464 | MS.gene90353:CDS | 40.0% |
| !! | GCAGTTGATGACAAAGTTGT+TGG | - | chr7.4:44079913-44079932 | None:intergenic | 40.0% |
| !! | GTTGATGACAAAGTTGTTGG+AGG | - | chr7.4:44079910-44079929 | None:intergenic | 40.0% |
| !!! | GGTTTTGAAGCAAAGTGATG+TGG | + | chr7.4:44081859-44081878 | MS.gene90353:CDS | 40.0% |
| !!! | TTTCCTGCTTTTTTTGCCTC+TGG | - | chr7.4:44083088-44083107 | None:intergenic | 40.0% |
| AAAGTGATGTGGGAAGTCTG+GGG | + | chr7.4:44081870-44081889 | MS.gene90353:CDS | 45.0% | |
| AAATGTTAACTAGTGCCCCC+GGG | - | chr7.4:44082483-44082502 | None:intergenic | 45.0% | |
| AAATTCAGCTGGAACTGCAG+TGG | + | chr7.4:44083141-44083160 | MS.gene90353:CDS | 45.0% | |
| AACCAATTAACTGTGGCTCG+AGG | + | chr7.4:44082885-44082904 | MS.gene90353:intron | 45.0% | |
| AACCTCATCAACCTATCACC+AGG | - | chr7.4:44080984-44081003 | None:intergenic | 45.0% | |
| AACTCTGTGTCTGCATGGTA+GGG | - | chr7.4:44081292-44081311 | None:intergenic | 45.0% | |
| AATTGCACCAATGTTGCTGC+TGG | + | chr7.4:44081146-44081165 | MS.gene90353:CDS | 45.0% | |
| AGATGCTGAGGAAGAAGAAG+AGG | - | chr7.4:44079773-44079792 | None:intergenic | 45.0% | |
| ATGGTCAACTACCGCAATTG+TGG | + | chr7.4:44081491-44081510 | MS.gene90353:intron | 45.0% | |
| ATTGGCAGACTATGACAGGT+GGG | + | chr7.4:44081201-44081220 | MS.gene90353:CDS | 45.0% | |
| CAAAGTGATGTGGGAAGTCT+GGG | + | chr7.4:44081869-44081888 | MS.gene90353:CDS | 45.0% | |
| CAACCAATTGGAGTTGGAGT+TGG | + | chr7.4:44080717-44080736 | MS.gene90353:CDS | 45.0% | |
| CTAGAAAGAAGAGGATGGCT+CGG | + | chr7.4:44081027-44081046 | MS.gene90353:CDS | 45.0% | |
| CTCATGCAAATCCAGGTAAC+TGG | + | chr7.4:44081174-44081193 | MS.gene90353:CDS | 45.0% | |
| CTCGTTAACAAGACCCGAAA+AGG | - | chr7.4:44082328-44082347 | None:intergenic | 45.0% | |
| CTGCGGATATCGGAGTATAA+TGG | + | chr7.4:44081587-44081606 | MS.gene90353:intron | 45.0% | |
| GAAATGTTAACTAGTGCCCC+CGG | - | chr7.4:44082484-44082503 | None:intergenic | 45.0% | |
| GCAACAAGTTCAAGTGCAAG+AGG | + | chr7.4:44080137-44080156 | MS.gene90353:CDS | 45.0% | |
| GGAAGCCTGAAAAGAACTTG+AGG | + | chr7.4:44081822-44081841 | MS.gene90353:CDS | 45.0% | |
| GGCGGTTTATGTCTCATCAT+AGG | + | chr7.4:44081054-44081073 | MS.gene90353:CDS | 45.0% | |
| TATTGGCAGACTATGACAGG+TGG | + | chr7.4:44081200-44081219 | MS.gene90353:CDS | 45.0% | |
| TCCACAAACCTGTCTCCTAT+CGG | - | chr7.4:44081336-44081355 | None:intergenic | 45.0% | |
| TGAACCAACCTCGGTTTAAC+CGG | - | chr7.4:44082773-44082792 | None:intergenic | 45.0% | |
| TGCCAATACATCCAGTTACC+TGG | - | chr7.4:44081188-44081207 | None:intergenic | 45.0% | |
| TTCTTCCTCTGCAGCTTCTT+GGG | + | chr7.4:44079792-44079811 | MS.gene90353:intron | 45.0% | |
| TTGCGGTATCTGCAGACAAA+TGG | - | chr7.4:44081653-44081672 | None:intergenic | 45.0% | |
| TTGCTGCATTATTCCCATGC+TGG | - | chr7.4:44083123-44083142 | None:intergenic | 45.0% | |
| ! | CGTGTGTGATGGTGTAAATG+GGG | + | chr7.4:44080260-44080279 | MS.gene90353:CDS | 45.0% |
| ! | GACGATGTTTTCGTGTGTGA+TGG | + | chr7.4:44080249-44080268 | MS.gene90353:CDS | 45.0% |
| ! | TATCAGTTGTTTCCTGGTCC+TGG | + | chr7.4:44080963-44080982 | MS.gene90353:CDS | 45.0% |
| ! | TGTTGTGGAGGTACAATGAG+AGG | - | chr7.4:44080690-44080709 | None:intergenic | 45.0% |
| ! | TTCACCGTCTTGTTCAACCA+TGG | + | chr7.4:44082850-44082869 | MS.gene90353:intron | 45.0% |
| !! | GAAAGTGCTGCTAGGAGATT+AGG | + | chr7.4:44080429-44080448 | MS.gene90353:CDS | 45.0% |
| !! | GGTGATAGGTTGATGAGGTT+AGG | + | chr7.4:44080984-44081003 | MS.gene90353:CDS | 45.0% |
| !! | TAGTAGCAGCAGGTTGGTAA+GGG | - | chr7.4:44080791-44080810 | None:intergenic | 45.0% |
| !! | TTAGTAGCAGCAGGTTGGTA+AGG | - | chr7.4:44080792-44080811 | None:intergenic | 45.0% |
| !!! | GCTGTGTTTTGGTTCTGACA+TGG | - | chr7.4:44080606-44080625 | None:intergenic | 45.0% |
| !!! | GGTTTTAGAGGTCTCTGCAA+CGG | + | chr7.4:44081526-44081545 | MS.gene90353:intron | 45.0% |
| !! | AAAAAAAAAAAAAAATGATA+AGG | - | chr7.4:44082629-44082648 | None:intergenic | 5.0% |
| !! | AAAAAAAAAAAAAATGATAA+GGG | - | chr7.4:44082628-44082647 | None:intergenic | 5.0% |
| AAAGTCCTTAACCAGTGCCC+CGG | + | chr7.4:44082462-44082481 | MS.gene90353:intron | 50.0% | |
| AATGTTAACTAGTGCCCCCG+GGG | - | chr7.4:44082482-44082501 | None:intergenic | 50.0% | |
| AGAACCACCAGCAGCAACAT+TGG | - | chr7.4:44081156-44081175 | None:intergenic | 50.0% | |
| ATCAACCTATCACCAGGACC+AGG | - | chr7.4:44080978-44080997 | None:intergenic | 50.0% | |
| CAGACACAGAGTTCTCACCA+GGG | + | chr7.4:44081299-44081318 | MS.gene90353:CDS | 50.0% | |
| CCACAAACCTGTCTCCTATC+GGG | - | chr7.4:44081335-44081354 | None:intergenic | 50.0% | |
| CCACTTGCAAGATTAGGTGC+TGG | + | chr7.4:44081119-44081138 | MS.gene90353:CDS | 50.0% | |
| CCAGAATTGGAGGCAAGAGA+TGG | + | chr7.4:44082021-44082040 | MS.gene90353:CDS | 50.0% | |
| CCAGCACCTAATCTTGCAAG+TGG | - | chr7.4:44081122-44081141 | None:intergenic | 50.0% | |
| CCATCTCTTGCCTCCAATTC+TGG | - | chr7.4:44082024-44082043 | None:intergenic | 50.0% | |
| CGGCATAGCAACCACAATTG+TGG | + | chr7.4:44081546-44081565 | MS.gene90353:intron | 50.0% | |
| CTCCGATATCCGCAGACAAA+TGG | - | chr7.4:44081582-44081601 | None:intergenic | 50.0% | |
| CTTCTTCCTCTGCAGCTTCT+TGG | + | chr7.4:44079791-44079810 | MS.gene90353:intron | 50.0% | |
| GAACTCTGTGTCTGCATGGT+AGG | - | chr7.4:44081293-44081312 | None:intergenic | 50.0% | |
| GACCTCGAGCCACAGTTAAT+TGG | - | chr7.4:44082890-44082909 | None:intergenic | 50.0% | |
| GCAAAGTGATGTGGGAAGTC+TGG | + | chr7.4:44081868-44081887 | MS.gene90353:CDS | 50.0% | |
| GGTGGTTCTCATGCAAATCC+AGG | + | chr7.4:44081167-44081186 | MS.gene90353:CDS | 50.0% | |
| GTGAGAACTCTGTGTCTGCA+TGG | - | chr7.4:44081297-44081316 | None:intergenic | 50.0% | |
| GTGTCTCGGCGAATGATTTG+AGG | + | chr7.4:44080379-44080398 | MS.gene90353:CDS | 50.0% | |
| TGCAGAGGAAGAAGATGCTG+AGG | - | chr7.4:44079785-44079804 | None:intergenic | 50.0% | |
| TGTTTCCTGGTCCTGGTGAT+AGG | + | chr7.4:44080970-44080989 | MS.gene90353:CDS | 50.0% | |
| TTCCTTGGCACCTGTTGTTC+CGG | + | chr7.4:44081232-44081251 | MS.gene90353:CDS | 50.0% | |
| TTGAAACACGCGTTCGACTC+AGG | - | chr7.4:44080642-44080661 | None:intergenic | 50.0% | |
| ! | AGTGCTGCTAGGAGATTAGG+TGG | + | chr7.4:44080432-44080451 | MS.gene90353:CDS | 50.0% |
| !! | AGCATGCTTAAAGAGTGCCC+CGG | - | chr7.4:44082356-44082375 | None:intergenic | 50.0% |
| !! | CGACAATCGAAAGTGCTGCT+AGG | + | chr7.4:44080421-44080440 | MS.gene90353:CDS | 50.0% |
| !! | GAAATGGGCTTGGTTTGGTC+TGG | - | chr7.4:44082728-44082747 | None:intergenic | 50.0% |
| !! | GTCCTGGTGATAGGTTGATG+AGG | + | chr7.4:44080979-44080998 | MS.gene90353:CDS | 50.0% |
| !! | TGTTGGTGGTGGTGATTGCA+TGG | + | chr7.4:44079993-44080012 | MS.gene90353:CDS | 50.0% |
| AACAGCCCAAGAAGCTGCAG+AGG | - | chr7.4:44079800-44079819 | None:intergenic | 55.0% | |
| AAGTCCTTAACCAGTGCCCC+GGG | + | chr7.4:44082463-44082482 | MS.gene90353:intron | 55.0% | |
| AAGTGCACCCGATAGGAGAC+AGG | + | chr7.4:44081325-44081344 | MS.gene90353:CDS | 55.0% | |
| ACCAACCTCGGTTTAACCGG+AGG | - | chr7.4:44082770-44082789 | None:intergenic | 55.0% | |
| CCCGATAGGAGACAGGTTTG+TGG | + | chr7.4:44081332-44081351 | MS.gene90353:intron | 55.0% | |
| GCAGACACAGAGTTCTCACC+AGG | + | chr7.4:44081298-44081317 | MS.gene90353:CDS | 55.0% | |
| GCTGCTAGGAGATTAGGTGG+TGG | + | chr7.4:44080435-44080454 | MS.gene90353:CDS | 55.0% | |
| TCCTCCGGTTAAACCGAGGT+TGG | + | chr7.4:44082766-44082785 | MS.gene90353:intron | 55.0% | |
| TCTGTGTCTGCATGGTAGGG+CGG | - | chr7.4:44081289-44081308 | None:intergenic | 55.0% | |
| TCTTGTTAACGAGTGCCCCC+GGG | + | chr7.4:44082335-44082354 | MS.gene90353:intron | 55.0% | |
| TGCACCAATGTTGCTGCTGG+TGG | + | chr7.4:44081149-44081168 | MS.gene90353:CDS | 55.0% | |
| TGCATCCTCCGGTTAAACCG+AGG | + | chr7.4:44082762-44082781 | MS.gene90353:intron | 55.0% | |
| ! | AGAAGAGGATGGCTCGGCAA+CGG | + | chr7.4:44081033-44081052 | MS.gene90353:CDS | 55.0% |
| ! | GTCTTGTTAACGAGTGCCCC+CGG | + | chr7.4:44082334-44082353 | MS.gene90353:intron | 55.0% |
| !! | ATGCTTAAAGAGTGCCCCGG+GGG | - | chr7.4:44082353-44082372 | None:intergenic | 55.0% |
| !! | CATGCTTAAAGAGTGCCCCG+GGG | - | chr7.4:44082354-44082373 | None:intergenic | 55.0% |
| !! | GCATGCTTAAAGAGTGCCCC+GGG | - | chr7.4:44082355-44082374 | None:intergenic | 55.0% |
| AGCCGGAACAACAGGTGCCA+AGG | - | chr7.4:44081237-44081256 | None:intergenic | 60.0% | |
| AGGGTCGAAGTGCACCCGAT+AGG | + | chr7.4:44081318-44081337 | MS.gene90353:CDS | 60.0% | |
| AGGTGGGACAGCAGCTTCCT+TGG | + | chr7.4:44081217-44081236 | MS.gene90353:CDS | 60.0% | |
| AGTCCTTAACCAGTGCCCCG+GGG | + | chr7.4:44082464-44082483 | MS.gene90353:intron | 60.0% | |
| CGGTCTACTGGAGGCTGTGT+CGG | - | chr7.4:44081263-44081282 | None:intergenic | 60.0% | |
| CTTGTTAACGAGTGCCCCCG+GGG | + | chr7.4:44082336-44082355 | MS.gene90353:intron | 60.0% | |
| TATCGGGTGCACTTCGACCC+TGG | - | chr7.4:44081319-44081338 | None:intergenic | 60.0% | |
| TCTGCATGGTAGGGCGGTCA+CGG | - | chr7.4:44081283-44081302 | None:intergenic | 60.0% | |
| GTAGGGCGGTCACGGTCTAC+TGG | - | chr7.4:44081275-44081294 | None:intergenic | 65.0% | |
| GTCCTTAACCAGTGCCCCGG+GGG | + | chr7.4:44082465-44082484 | MS.gene90353:intron | 65.0% | |
| ! | AGAGGATGGCTCGGCAACGG+CGG | + | chr7.4:44081036-44081055 | MS.gene90353:CDS | 65.0% |
| ! | GTCGGCTCAGCCGGAACAAC+AGG | - | chr7.4:44081245-44081264 | None:intergenic | 65.0% |
| AACTAGTGCCCCCGGGGCAC+TGG | - | chr7.4:44082476-44082495 | None:intergenic | 70.0% | |
| GGGCGGTCACGGTCTACTGG+AGG | - | chr7.4:44081272-44081291 | None:intergenic | 70.0% | |
| !! | GGAGGCTGTGTCGGCTCAGC+CGG | - | chr7.4:44081254-44081273 | None:intergenic | 70.0% |
| !! | TGCCCCCGGGGCACTGGTTA+AGG | - | chr7.4:44082470-44082489 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 44079493 | 44083204 | 44079493 | ID=MS.gene90353 |
| chr7.4 | mRNA | 44079493 | 44083204 | 44079493 | ID=MS.gene90353.t1;Parent=MS.gene90353 |
| chr7.4 | exon | 44079493 | 44079745 | 44079493 | ID=MS.gene90353.t1.exon1;Parent=MS.gene90353.t1 |
| chr7.4 | CDS | 44079493 | 44079745 | 44079493 | ID=cds.MS.gene90353.t1;Parent=MS.gene90353.t1 |
| chr7.4 | exon | 44079830 | 44081346 | 44079830 | ID=MS.gene90353.t1.exon2;Parent=MS.gene90353.t1 |
| chr7.4 | CDS | 44079830 | 44081346 | 44079830 | ID=cds.MS.gene90353.t1;Parent=MS.gene90353.t1 |
| chr7.4 | exon | 44081818 | 44081910 | 44081818 | ID=MS.gene90353.t1.exon3;Parent=MS.gene90353.t1 |
| chr7.4 | CDS | 44081818 | 44081910 | 44081818 | ID=cds.MS.gene90353.t1;Parent=MS.gene90353.t1 |
| chr7.4 | exon | 44082000 | 44082100 | 44082000 | ID=MS.gene90353.t1.exon4;Parent=MS.gene90353.t1 |
| chr7.4 | CDS | 44082000 | 44082100 | 44082000 | ID=cds.MS.gene90353.t1;Parent=MS.gene90353.t1 |
| chr7.4 | exon | 44082215 | 44082267 | 44082215 | ID=MS.gene90353.t1.exon5;Parent=MS.gene90353.t1 |
| chr7.4 | CDS | 44082215 | 44082267 | 44082215 | ID=cds.MS.gene90353.t1;Parent=MS.gene90353.t1 |
| chr7.4 | exon | 44082537 | 44082613 | 44082537 | ID=MS.gene90353.t1.exon6;Parent=MS.gene90353.t1 |
| chr7.4 | CDS | 44082537 | 44082613 | 44082537 | ID=cds.MS.gene90353.t1;Parent=MS.gene90353.t1 |
| chr7.4 | exon | 44083043 | 44083204 | 44083043 | ID=MS.gene90353.t1.exon7;Parent=MS.gene90353.t1 |
| chr7.4 | CDS | 44083043 | 44083204 | 44083043 | ID=cds.MS.gene90353.t1;Parent=MS.gene90353.t1 |
| Gene Sequence |
| Protein sequence |
