AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene90373

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene90373.t1 MTR_2g105290 95.455 176 8 0 1 176 1 176 2.65e-125 350
MS.gene90373.t1 MTR_4g127140 83.871 186 20 2 1 176 1 186 9.84e-102 290
MS.gene90373.t1 MTR_8g086290 71.257 167 48 0 1 167 1 167 8.57e-86 250
MS.gene90373.t1 MTR_7g028448 66.258 163 47 2 1 163 1 155 5.69e-67 202
MS.gene90373.t1 MTR_4g036915 66.258 163 47 2 1 163 1 155 5.69e-67 202
MS.gene90373.t1 MTR_1g105910 41.040 173 92 2 8 173 5 174 2.54e-41 139
MS.gene90373.t1 MTR_3g052920 41.520 171 90 2 8 171 5 172 7.60e-41 137
MS.gene90373.t1 MTR_1g106070 39.306 173 95 2 8 173 5 174 2.68e-40 134
MS.gene90373.t1 MTR_8g043650 41.520 171 90 3 8 171 5 172 3.14e-40 136
MS.gene90373.t1 MTR_1g012570 39.884 173 94 2 8 173 5 174 8.22e-40 135
MS.gene90373.t1 MTR_1g105920 39.181 171 94 2 8 171 5 172 7.51e-39 132
MS.gene90373.t1 MTR_2g030740 39.766 171 93 3 8 171 5 172 2.95e-38 131
MS.gene90373.t1 MTR_1g108510 40.606 165 88 2 8 165 5 166 1.92e-36 126
MS.gene90373.t1 MTR_3g030770 40.606 165 88 2 8 165 5 166 4.46e-36 125
MS.gene90373.t1 MTR_3g080940 38.372 172 102 1 6 173 3 174 6.30e-36 124
MS.gene90373.t1 MTR_1g108580 38.788 165 91 2 8 165 5 166 1.18e-34 121
MS.gene90373.t1 MTR_2g093190 40.606 165 88 2 8 165 5 166 1.26e-34 121
MS.gene90373.t1 MTR_1g105905 35.625 160 93 2 21 173 1 157 3.06e-31 112
MS.gene90373.t1 MTR_1g077360 37.870 169 95 2 8 169 5 170 5.23e-31 112
MS.gene90373.t1 MTR_3g052870 42.400 125 62 2 8 125 5 126 1.10e-30 111
MS.gene90373.t1 MTR_1g075600 36.471 170 96 2 8 169 5 170 2.17e-30 110
MS.gene90373.t1 MTR_5g045560 34.524 168 100 2 8 168 5 169 8.99e-30 109
MS.gene90373.t1 MTR_5g053390 36.158 177 91 4 8 171 5 172 1.24e-29 108
MS.gene90373.t1 MTR_0121s0080 39.634 164 88 4 8 164 5 164 1.65e-29 108
MS.gene90373.t1 MTR_2g085280 34.884 172 100 3 8 171 5 172 1.43e-28 106
MS.gene90373.t1 MTR_2g085250 34.483 174 102 3 8 173 5 174 1.48e-28 106
MS.gene90373.t1 MTR_0121s0100 40.945 127 65 2 8 127 5 128 2.24e-26 97.8
MS.gene90373.t1 MTR_4g131030 41.481 135 75 3 11 142 1 134 5.36e-26 99.0
MS.gene90373.t1 MTR_5g055100 33.333 168 108 2 8 171 5 172 2.03e-25 98.2
MS.gene90373.t1 MTR_1g047550 45.455 99 52 1 11 107 1 99 2.46e-24 94.0
MS.gene90373.t1 MTR_8g079502 41.964 112 63 1 11 120 1 112 3.41e-24 93.6
MS.gene90373.t1 MTR_8g022970 36.585 164 89 4 5 161 15 170 5.82e-24 93.2
MS.gene90373.t1 MTR_8g046350 43.750 96 53 1 11 106 1 95 4.80e-23 90.1
MS.gene90373.t1 MTR_1g054265 38.655 119 71 1 11 127 1 119 5.91e-22 87.4
MS.gene90373.t1 MTR_1g063160 48.810 84 41 1 11 94 1 82 9.15e-22 87.0
MS.gene90373.t1 MTR_3g030780 41.667 132 63 6 8 130 5 131 1.54e-21 85.5
MS.gene90373.t1 MTR_7g062350 38.889 144 75 5 29 164 38 176 2.05e-21 87.8
MS.gene90373.t1 MTR_8g051580 41.414 99 56 1 11 107 1 99 1.70e-20 84.0
MS.gene90373.t1 MTR_4g094632 50.000 72 36 0 11 82 1 72 4.25e-20 82.4
MS.gene90373.t1 MTR_3g437790 36.957 138 82 3 29 161 30 167 7.06e-20 82.4
MS.gene90373.t1 MTR_4g094638 44.444 81 45 0 11 91 1 81 9.35e-20 82.0
MS.gene90373.t1 MTR_3g109930 34.559 136 83 3 30 161 20 153 1.18e-18 79.0
MS.gene90373.t1 MTR_3g452380 36.364 121 67 3 8 127 13 124 1.48e-18 80.1
MS.gene90373.t1 MTR_8g033270 50.725 69 34 0 11 79 1 69 3.54e-17 76.6
MS.gene90373.t1 MTR_8g087860 44.828 87 47 1 6 92 13 98 4.10e-17 76.3
MS.gene90373.t1 MTR_3g005530 46.667 75 40 0 11 85 1 75 5.00e-17 75.9
MS.gene90373.t1 MTR_3g067870 48.485 66 34 0 19 84 83 148 5.32e-17 74.3
MS.gene90373.t1 MTR_1g053070 52.174 69 33 0 11 79 1 69 6.00e-17 75.9
MS.gene90373.t1 MTR_0003s0590 46.835 79 42 0 11 89 1 79 6.69e-17 75.9
MS.gene90373.t1 MTR_3g067875 54.717 53 24 0 24 76 4 56 8.82e-17 71.2
MS.gene90373.t1 MTR_3g113030 36.076 158 80 7 11 162 1 143 1.02e-16 75.1
MS.gene90373.t1 MTR_1g029670 29.630 162 102 3 11 169 1 153 1.75e-16 73.6
MS.gene90373.t1 MTR_3g102570 35.417 144 69 5 11 133 1 141 2.57e-16 75.1
MS.gene90373.t1 MTR_3g088615 44.615 65 36 0 11 75 1 65 3.62e-16 72.8
MS.gene90373.t1 MTR_2g017865 39.560 91 55 0 2 92 7 97 4.12e-16 73.9
MS.gene90373.t1 MTR_5g032520 35.833 120 73 2 11 126 1 120 6.70e-16 72.8
MS.gene90373.t1 MTR_1g101970 33.540 161 97 4 11 168 1 154 9.55e-16 71.6
MS.gene90373.t1 MTR_5g066180 43.478 69 39 0 11 79 1 69 1.08e-15 72.4
MS.gene90373.t1 MTR_5g021270 39.604 101 54 2 11 104 1 101 1.26e-15 72.0
MS.gene90373.t1 MTR_5g021270 39.604 101 54 2 11 104 1 101 1.29e-15 72.0
MS.gene90373.t1 MTR_2g461710 56.364 55 24 0 11 65 1 55 1.50e-15 67.8
MS.gene90373.t1 MTR_4g084740 49.296 71 35 1 11 80 1 71 1.92e-15 72.8
MS.gene90373.t1 MTR_2g045020 35.227 176 96 5 5 176 20 181 2.10e-15 70.9
MS.gene90373.t1 MTR_5g066960 46.667 60 32 0 11 70 1 60 2.50e-15 67.4
MS.gene90373.t1 MTR_4g109810 40.000 95 55 2 11 103 1 95 2.80e-15 71.2
MS.gene90373.t1 MTR_4g102530 39.130 115 60 3 11 119 1 111 3.21e-15 70.5
MS.gene90373.t1 MTR_4g093970 32.955 176 106 4 11 176 27 200 4.23e-15 70.9
MS.gene90373.t1 MTR_7g016600 54.386 57 26 0 11 67 1 57 4.67e-15 70.9
MS.gene90373.t1 MTR_8g097090 43.902 82 28 2 11 74 1 82 5.29e-15 70.5
MS.gene90373.t1 MTR_6g015975 48.611 72 36 1 11 81 1 72 5.98e-15 70.5
MS.gene90373.t1 MTR_2g009890 45.070 71 39 0 11 81 1 71 6.53e-15 70.9
MS.gene90373.t1 MTR_5g032150 54.386 57 26 0 11 67 1 57 6.86e-15 70.1
MS.gene90373.t1 MTR_3g084980 56.140 57 25 0 11 67 1 57 8.79e-15 70.1
MS.gene90373.t1 MTR_6g464720 45.714 70 37 1 11 79 1 70 8.82e-15 70.1
MS.gene90373.t1 MTR_7g075870 45.205 73 40 0 11 83 1 73 9.14e-15 69.7
MS.gene90373.t1 MTR_8g033220 54.386 57 26 0 11 67 1 57 1.35e-14 69.3
MS.gene90373.t1 MTR_8g033220 54.386 57 26 0 11 67 1 57 1.41e-14 69.3
MS.gene90373.t1 MTR_7g075870 53.448 58 27 0 11 68 1 58 1.57e-14 68.9
MS.gene90373.t1 MTR_7g075850 48.438 64 33 0 11 74 1 64 1.64e-14 69.3
MS.gene90373.t1 MTR_5g046870 52.632 57 27 0 11 67 1 57 1.79e-14 66.6
MS.gene90373.t1 MTR_1g038300 44.000 75 40 1 11 83 1 75 2.96e-14 68.6
MS.gene90373.t1 MTR_4g109830 44.286 70 38 1 11 79 1 70 4.51e-14 68.2
MS.gene90373.t1 MTR_5g031000 42.029 69 40 0 11 79 1 69 5.52e-14 67.8
MS.gene90373.t1 MTR_5g031000 42.029 69 40 0 11 79 1 69 5.63e-14 67.8
MS.gene90373.t1 MTR_8g066260 50.000 58 29 0 11 68 1 58 6.18e-14 67.8
MS.gene90373.t1 MTR_5g046790 50.909 55 27 0 11 65 1 55 8.45e-14 67.0
MS.gene90373.t1 MTR_4g093030 52.727 55 26 0 11 65 1 55 1.32e-13 65.5
MS.gene90373.t1 MTR_4g036050 27.389 157 104 3 11 164 1 150 1.88e-13 65.5
MS.gene90373.t1 MTR_4g036050 27.389 157 104 3 11 164 1 150 2.20e-13 65.5
MS.gene90373.t1 MTR_1g108500 51.852 54 26 0 25 78 110 163 2.48e-13 67.0
MS.gene90373.t1 MTR_1g075570 31.967 122 73 2 21 142 1 112 2.53e-13 64.7
MS.gene90373.t1 MTR_3g067910 46.429 56 30 0 25 80 3 58 6.15e-13 62.4
MS.gene90373.t1 MTR_4g036050 36.264 91 57 1 11 100 1 91 9.18e-13 63.5
MS.gene90373.t1 MTR_4g036050 36.264 91 57 1 11 100 1 91 9.66e-13 63.5
MS.gene90373.t1 MTR_7g016630 41.429 70 40 1 11 79 1 70 1.68e-12 63.9
MS.gene90373.t1 MTR_4g108720 50.943 53 26 0 11 63 1 53 2.58e-12 64.3
MS.gene90373.t1 MTR_1g041615 38.384 99 56 2 25 122 19 113 3.16e-12 61.2
MS.gene90373.t1 MTR_5g041650 45.283 53 29 0 11 63 38 90 1.62e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene90373.t1 AT5G60440 38.608 158 90 2 8 158 3 160 5.20e-31 114
MS.gene90373.t1 AT2G24840 36.709 158 95 3 10 162 61 218 5.98e-28 105
MS.gene90373.t1 AT1G65360 36.364 165 102 2 8 169 3 167 7.66e-27 101
MS.gene90373.t1 AT1G01530 37.500 168 94 4 8 168 3 166 6.97e-25 97.1
MS.gene90373.t1 AT2G34440 36.054 147 82 4 11 150 1 142 8.82e-23 89.7
MS.gene90373.t1 AT4G36590 34.118 170 84 4 12 162 7 167 2.00e-22 90.5
MS.gene90373.t1 AT1G28460 36.095 169 93 4 8 165 4 168 3.28e-22 88.6
MS.gene90373.t1 AT3G66656 42.400 125 56 3 11 123 1 121 1.72e-21 86.7
MS.gene90373.t1 AT1G29962 34.884 172 94 5 8 165 4 171 5.09e-21 85.5
MS.gene90373.t1 AT2G42830 39.062 128 62 4 4 127 9 124 2.56e-20 85.1
MS.gene90373.t1 AT2G42830 39.062 128 62 4 4 127 9 124 3.06e-20 84.7
MS.gene90373.t1 AT5G10140 37.037 162 75 7 11 163 1 144 1.04e-19 81.6
MS.gene90373.t1 AT5G10140 36.310 168 76 7 11 167 1 148 1.46e-19 81.6
MS.gene90373.t1 AT5G10140 36.420 162 76 6 11 163 1 144 2.13e-19 81.6
MS.gene90373.t1 AT5G10140 36.585 164 73 7 11 163 1 144 2.90e-19 80.9
MS.gene90373.t1 AT4G09960 33.094 139 80 4 11 149 1 126 6.11e-19 80.9
MS.gene90373.t1 AT1G28450 34.118 170 94 5 8 163 4 169 6.55e-19 80.1
MS.gene90373.t1 AT4G09960 31.973 147 87 4 3 149 19 152 7.43e-19 81.3
MS.gene90373.t1 AT3G58780 39.167 120 57 4 9 124 20 127 7.44e-19 81.3
MS.gene90373.t1 AT4G09960 33.094 139 80 4 11 149 2 127 7.51e-19 80.9
MS.gene90373.t1 AT4G09960 33.094 139 80 4 11 149 1 126 7.62e-19 80.9
MS.gene90373.t1 AT3G58780 39.167 120 57 4 9 124 14 121 7.75e-19 81.3
MS.gene90373.t1 AT4G09960 33.094 139 80 4 11 149 11 136 8.39e-19 80.9
MS.gene90373.t1 AT3G58780 39.167 120 57 4 9 124 14 121 9.25e-19 81.6
MS.gene90373.t1 AT5G20240 41.525 118 64 4 11 125 1 116 1.53e-18 78.2
MS.gene90373.t1 AT3G04100 30.435 161 100 3 8 158 10 168 2.11e-18 79.0
MS.gene90373.t1 AT5G20240 40.678 118 65 4 11 125 1 116 2.54e-18 79.0
MS.gene90373.t1 AT3G57230 42.353 85 47 1 11 93 1 85 7.10e-18 76.3
MS.gene90373.t1 AT4G09960 33.094 139 80 4 11 149 96 221 1.38e-17 79.0
MS.gene90373.t1 AT4G22950 37.273 110 68 1 11 119 1 110 1.83e-17 75.9
MS.gene90373.t1 AT1G77950 49.296 71 35 1 11 80 1 71 1.88e-17 77.4
MS.gene90373.t1 AT1G77950 49.296 71 35 1 11 80 1 71 1.88e-17 77.4
MS.gene90373.t1 AT1G77950 49.296 71 35 1 11 80 1 71 1.88e-17 77.4
MS.gene90373.t1 AT1G77950 49.296 71 35 1 11 80 1 71 1.88e-17 77.4
MS.gene90373.t1 AT3G57230 42.353 85 47 1 11 93 1 85 2.62e-17 77.0
MS.gene90373.t1 AT3G57230 42.353 85 47 1 11 93 1 85 2.62e-17 77.0
MS.gene90373.t1 AT3G58780 38.136 118 54 4 9 124 14 114 2.95e-17 76.6
MS.gene90373.t1 AT1G72350 28.834 163 87 3 12 174 43 176 3.30e-17 76.3
MS.gene90373.t1 AT5G62165 46.835 79 42 0 11 89 1 79 3.65e-17 74.7
MS.gene90373.t1 AT5G62165 46.835 79 42 0 11 89 1 79 3.65e-17 74.7
MS.gene90373.t1 AT5G62165 46.835 79 42 0 11 89 1 79 3.65e-17 74.7
MS.gene90373.t1 AT5G62165 46.835 79 42 0 11 89 1 79 3.71e-17 73.2
MS.gene90373.t1 AT3G54340 53.226 62 29 0 11 72 1 62 3.76e-17 76.3
MS.gene90373.t1 AT1G22130 56.897 58 25 0 11 68 1 58 4.06e-17 77.8
MS.gene90373.t1 AT1G77980 49.296 71 35 1 11 80 1 71 4.66e-17 77.4
MS.gene90373.t1 AT4G22950 37.273 110 68 1 11 119 1 110 5.91e-17 75.5
MS.gene90373.t1 AT4G22950 37.273 110 68 1 11 119 1 110 5.91e-17 75.5
MS.gene90373.t1 AT5G62165 46.835 79 42 0 11 89 1 79 6.16e-17 73.9
MS.gene90373.t1 AT5G62165 46.835 79 42 0 11 89 1 79 6.16e-17 73.9
MS.gene90373.t1 AT5G62165 46.835 79 42 0 11 89 1 79 6.16e-17 73.9
MS.gene90373.t1 AT5G62165 46.835 79 42 0 11 89 1 79 6.16e-17 73.9
MS.gene90373.t1 AT5G62165 46.835 79 42 0 11 89 1 79 6.16e-17 73.9
MS.gene90373.t1 AT5G51870 46.835 79 42 0 8 86 21 99 8.60e-17 74.7
MS.gene90373.t1 AT5G51860 47.368 76 40 0 11 86 1 76 1.26e-16 74.3
MS.gene90373.t1 AT5G62165 46.835 79 42 0 11 89 1 79 1.27e-16 74.3
MS.gene90373.t1 AT5G62165 46.835 79 42 0 11 89 1 79 1.27e-16 74.3
MS.gene90373.t1 AT5G62165 46.835 79 42 0 11 89 1 79 1.27e-16 74.3
MS.gene90373.t1 AT5G62165 46.835 79 42 0 11 89 1 79 1.32e-16 74.3
MS.gene90373.t1 AT5G62165 46.835 79 42 0 11 89 1 79 1.32e-16 74.3
MS.gene90373.t1 AT5G23260 32.353 170 95 5 6 172 12 164 1.64e-16 75.1
MS.gene90373.t1 AT5G13790 44.706 85 45 1 11 95 1 83 1.72e-16 75.1
MS.gene90373.t1 AT5G51860 47.368 76 40 0 11 86 1 76 1.84e-16 73.9
MS.gene90373.t1 AT3G57390 44.048 84 47 0 11 94 1 84 2.03e-16 74.3
MS.gene90373.t1 AT2G45660 38.793 116 59 3 11 119 1 111 2.43e-16 72.4
MS.gene90373.t1 AT4G24540 31.953 169 97 4 11 167 1 163 2.45e-16 73.9
MS.gene90373.t1 AT4G18960 51.351 74 28 1 12 85 18 83 2.58e-16 74.3
MS.gene90373.t1 AT5G51870 47.368 76 40 0 11 86 1 76 2.60e-16 73.6
MS.gene90373.t1 AT5G13790 50.725 69 34 0 11 79 1 69 2.68e-16 74.7
MS.gene90373.t1 AT5G51870 47.368 76 40 0 11 86 1 76 2.85e-16 72.8
MS.gene90373.t1 AT2G45650 49.275 69 35 0 11 79 1 69 3.26e-16 74.3
MS.gene90373.t1 AT5G23260 30.000 160 97 3 6 161 12 160 3.68e-16 74.3
MS.gene90373.t1 AT4G37940 44.000 75 42 0 11 85 1 75 4.54e-16 73.2
MS.gene90373.t1 AT4G37940 44.000 75 42 0 11 85 1 75 4.81e-16 73.2
MS.gene90373.t1 AT3G58780 34.307 137 65 4 9 124 14 146 4.93e-16 73.9
MS.gene90373.t1 AT3G57390 44.048 84 47 0 11 94 1 84 4.98e-16 73.6
MS.gene90373.t1 AT5G51870 47.368 76 40 0 11 86 1 76 5.14e-16 73.2
MS.gene90373.t1 AT5G51870 46.753 77 41 0 10 86 10 86 6.13e-16 73.2
MS.gene90373.t1 AT4G37940 44.000 75 42 0 11 85 1 75 7.24e-16 71.6
MS.gene90373.t1 AT5G23260 29.936 157 95 3 11 163 1 146 7.37e-16 72.8
MS.gene90373.t1 AT2G45660 38.793 116 59 3 11 119 1 111 8.65e-16 72.4
MS.gene90373.t1 AT3G61120 45.070 71 39 0 11 81 1 71 1.38e-15 72.4
MS.gene90373.t1 AT5G23260 32.727 165 91 5 11 172 1 148 1.41e-15 72.4
MS.gene90373.t1 AT2G22540 47.826 69 36 0 11 79 1 69 2.69e-15 71.6
MS.gene90373.t1 AT2G22540 47.826 69 36 0 11 79 1 69 2.69e-15 71.6
MS.gene90373.t1 AT4G11880 51.613 62 30 0 11 72 1 62 3.07e-15 70.1
MS.gene90373.t1 AT4G11880 51.613 62 30 0 11 72 1 62 3.07e-15 70.1
MS.gene90373.t1 AT2G22630 48.000 75 31 1 11 85 1 67 3.27e-15 70.9
MS.gene90373.t1 AT2G22630 48.000 75 31 1 11 85 1 67 3.27e-15 70.9
MS.gene90373.t1 AT5G65070 44.286 70 38 1 11 79 1 70 3.91e-15 68.9
MS.gene90373.t1 AT5G65070 44.286 70 38 1 11 79 1 70 5.03e-15 70.1
MS.gene90373.t1 AT4G11880 55.172 58 26 0 11 68 1 58 7.65e-15 70.1
MS.gene90373.t1 AT4G11880 55.172 58 26 0 11 68 1 58 7.65e-15 70.1
MS.gene90373.t1 AT2G03710 54.386 57 26 0 11 67 1 57 7.80e-15 69.3
MS.gene90373.t1 AT2G22540 54.545 55 25 0 11 65 1 55 9.73e-15 69.7
MS.gene90373.t1 AT1G24260 54.386 57 26 0 11 67 1 57 1.01e-14 70.1
MS.gene90373.t1 AT1G24260 54.386 57 26 0 11 67 1 57 1.09e-14 70.1
MS.gene90373.t1 AT1G24260 54.386 57 26 0 11 67 1 57 1.14e-14 69.7
MS.gene90373.t1 AT2G03710 54.386 57 26 0 11 67 1 57 1.19e-14 70.1
MS.gene90373.t1 AT5G15800 54.386 57 26 0 11 67 1 57 1.26e-14 69.7
MS.gene90373.t1 AT2G03710 54.386 57 26 0 11 67 1 57 1.27e-14 70.1
MS.gene90373.t1 AT5G65070 44.286 70 38 1 11 79 1 70 1.45e-14 69.3
MS.gene90373.t1 AT1G47760 48.485 66 34 0 11 76 1 66 1.49e-14 68.6
MS.gene90373.t1 AT5G65050 49.180 61 31 0 11 71 1 61 1.49e-14 68.2
MS.gene90373.t1 AT3G02310 54.386 57 26 0 11 67 1 57 2.00e-14 68.6
MS.gene90373.t1 AT5G65070 44.286 70 38 1 11 79 1 70 2.03e-14 68.6
MS.gene90373.t1 AT5G65070 45.312 64 35 0 11 74 1 64 2.19e-14 68.9
MS.gene90373.t1 AT5G15800 54.386 57 26 0 11 67 1 57 2.52e-14 69.3
MS.gene90373.t1 AT5G65050 35.714 112 65 3 11 121 1 106 3.55e-14 67.4
MS.gene90373.t1 AT3G02310 54.386 57 26 0 11 67 1 57 4.13e-14 68.6
MS.gene90373.t1 AT5G65050 49.180 61 31 0 11 71 1 61 5.07e-14 67.4
MS.gene90373.t1 AT5G65050 49.180 61 31 0 11 71 1 61 5.12e-14 67.0
MS.gene90373.t1 AT1G69120 48.276 58 30 0 11 68 1 58 6.58e-14 67.8
MS.gene90373.t1 AT2G14210 48.276 58 30 0 11 68 1 58 6.72e-14 67.8
MS.gene90373.t1 AT5G60910 52.727 55 26 0 11 65 1 55 6.91e-14 67.8
MS.gene90373.t1 AT1G26310 50.000 58 29 0 11 68 1 58 7.25e-14 67.8
MS.gene90373.t1 AT5G65060 47.541 61 32 0 11 71 1 61 9.54e-14 66.6
MS.gene90373.t1 AT2G14210 48.276 58 30 0 11 68 1 58 9.63e-14 67.0
MS.gene90373.t1 AT3G30260 49.123 57 29 0 11 67 1 57 1.15e-13 67.0
MS.gene90373.t1 AT5G65060 47.541 61 32 0 11 71 1 61 1.37e-13 66.2
MS.gene90373.t1 AT5G65060 47.541 61 32 0 11 71 1 61 1.49e-13 65.9
MS.gene90373.t1 AT1G71692 32.000 125 82 3 11 133 1 124 1.54e-13 66.2
MS.gene90373.t1 AT5G65080 31.098 164 96 4 6 169 3 149 1.72e-13 65.9
MS.gene90373.t1 AT1G69120 48.276 58 30 0 11 68 1 58 1.75e-13 66.6
MS.gene90373.t1 AT1G69540 25.414 181 113 6 11 170 1 180 6.79e-13 65.9
MS.gene90373.t1 AT5G65080 31.288 163 91 6 6 162 3 150 7.10e-13 63.9
MS.gene90373.t1 AT4G37435 49.123 57 29 0 11 67 1 57 9.21e-13 63.5
MS.gene90373.t1 AT1G69540 25.414 181 113 6 11 170 1 180 1.24e-12 65.1
MS.gene90373.t1 AT1G31140 36.538 104 64 2 11 113 1 103 5.95e-12 62.0
MS.gene90373.t1 AT1G18750 43.860 57 32 0 11 67 1 57 1.04e-11 62.4
MS.gene90373.t1 AT1G18750 43.860 57 32 0 11 67 1 57 1.22e-11 62.4
MS.gene90373.t1 AT1G18750 43.860 57 32 0 11 67 1 57 1.26e-11 62.4
MS.gene90373.t1 AT5G49490 36.047 86 51 1 1 82 34 119 1.32e-11 62.0
MS.gene90373.t1 AT2G26320 44.262 61 34 0 8 68 14 74 2.25e-11 58.2
MS.gene90373.t1 AT1G31140 38.710 93 52 2 11 98 1 93 3.13e-11 60.1
MS.gene90373.t1 AT2G03060 44.068 59 32 1 11 68 1 59 4.97e-11 60.5
MS.gene90373.t1 AT2G03060 44.068 59 32 1 11 68 1 59 4.97e-11 60.5
MS.gene90373.t1 AT2G03060 44.068 59 32 1 11 68 1 59 4.97e-11 60.5
MS.gene90373.t1 AT2G03060 44.068 59 32 1 11 68 1 59 5.57e-11 60.5

Find 29 sgRNAs with CRISPR-Local

Find 33 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATCAGCTTGAACAATTTA+TGG 0.161799 2.1:+675814 MS.gene90373:CDS
ACTAGAAGATGTTCAAAATT+TGG 0.191288 2.1:+675736 MS.gene90373:CDS
CTTCATCTTTAACTCGTAAA+TGG 0.226947 2.1:-675840 None:intergenic
GTCCCATGTTCTTCTTTCTT+TGG 0.246339 2.1:-675397 None:intergenic
ATCCAATTTCACCATGGATA+TGG 0.282644 2.1:+675370 None:intergenic
CCTTCTTGATCTCAATCTTC+TGG 0.317157 2.1:-675421 None:intergenic
TGAGAAAGTGACAAGTTTGT+TGG 0.353316 2.1:-675456 None:intergenic
GGTGACAAACTCTACTGTTT+TGG 0.353846 2.1:+675563 MS.gene90373:CDS
AAAGATGAAGCTTGTTGAAA+GGG 0.440736 2.1:+675853 MS.gene90373:CDS
CAAAGGAACCACTGAGTTTG+AGG 0.448124 2.1:+675622 MS.gene90373:CDS
TTCCTTTGACGTAGCTATTG+AGG 0.468952 2.1:-675607 None:intergenic
TAAAGATGAAGCTTGTTGAA+AGG 0.488937 2.1:+675852 MS.gene90373:CDS
TTGAGGACAACGTTAGTGTC+GGG 0.518814 2.1:-675590 None:intergenic
AGATTACAATAGACAATATG+AGG 0.522743 2.1:+675679 MS.gene90373:CDS
TCTTTGGTTAACCATATCCA+TGG 0.535708 2.1:-675381 None:intergenic
GGCGCAAAAGACGTTGGAGA+TGG 0.554315 2.1:+675703 MS.gene90373:CDS
CTATTGTAATCTTTGCAAGT+CGG 0.565418 2.1:-675668 None:intergenic
ATTGAGGACAACGTTAGTGT+CGG 0.575860 2.1:-675591 None:intergenic
ACCAGGGGAAAACACAATGA+TGG 0.576978 2.1:-675543 None:intergenic
GTCCTCAATAGCTACGTCAA+AGG 0.585254 2.1:+675605 MS.gene90373:CDS
CTTTGAATCCTCAAACTCAG+TGG 0.591334 2.1:-675630 None:intergenic
AACAGTAGAGTTTGTCACCA+GGG 0.615040 2.1:-675559 None:intergenic
TGAGGAGGCGCAAAAGACGT+TGG 0.623986 2.1:+675697 MS.gene90373:CDS
CCAGAAGATTGAGATCAAGA+AGG 0.640828 2.1:+675421 MS.gene90373:CDS
AACCAAAGAAAGAAGAACAT+GGG 0.647859 2.1:+675395 MS.gene90373:CDS
TAACCAAAGAAAGAAGAACA+TGG 0.648089 2.1:+675394 MS.gene90373:CDS
AAACAGTAGAGTTTGTCACC+AGG 0.654743 2.1:-675560 None:intergenic
ACAGTAGAGTTTGTCACCAG+GGG 0.676336 2.1:-675558 None:intergenic
TTACAATAGACAATATGAGG+AGG 0.689166 2.1:+675682 MS.gene90373:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! ACTAGAAGATGTTCAAAATT+TGG + chr2.1:675736-675755 MS.gene90373:CDS 25.0%
! AGATTACAATAGACAATATG+AGG + chr2.1:675679-675698 MS.gene90373:CDS 25.0%
AACCAAAGAAAGAAGAACAT+GGG + chr2.1:675395-675414 MS.gene90373:CDS 30.0%
ACTTTCTCAAAAAGAAGACA+AGG + chr2.1:675470-675489 MS.gene90373:CDS 30.0%
CTATTGTAATCTTTGCAAGT+CGG - chr2.1:675671-675690 None:intergenic 30.0%
CTTCATCTTTAACTCGTAAA+TGG - chr2.1:675843-675862 None:intergenic 30.0%
TAACCAAAGAAAGAAGAACA+TGG + chr2.1:675394-675413 MS.gene90373:CDS 30.0%
TGATCAGCTTGAACAATTTA+TGG + chr2.1:675814-675833 MS.gene90373:CDS 30.0%
TTACAATAGACAATATGAGG+AGG + chr2.1:675682-675701 MS.gene90373:CDS 30.0%
! TTGGCTAAGATTTTCAACAA+GGG + chr2.1:675755-675774 MS.gene90373:CDS 30.0%
! TTTGGCTAAGATTTTCAACA+AGG + chr2.1:675754-675773 MS.gene90373:CDS 30.0%
!! AAAGATGAAGCTTGTTGAAA+GGG + chr2.1:675853-675872 MS.gene90373:CDS 30.0%
!! TAAAGATGAAGCTTGTTGAA+AGG + chr2.1:675852-675871 MS.gene90373:CDS 30.0%
TGAGAAAGTGACAAGTTTGT+TGG - chr2.1:675459-675478 None:intergenic 35.0%
! AGATTTTCAACAAGGGTGAT+TGG + chr2.1:675762-675781 MS.gene90373:CDS 35.0%
AAACAGTAGAGTTTGTCACC+AGG - chr2.1:675563-675582 None:intergenic 40.0%
AACAGTAGAGTTTGTCACCA+GGG - chr2.1:675562-675581 None:intergenic 40.0%
ATTGAGGACAACGTTAGTGT+CGG - chr2.1:675594-675613 None:intergenic 40.0%
CCAGAAGATTGAGATCAAGA+AGG + chr2.1:675421-675440 MS.gene90373:CDS 40.0%
CCTTCTTGATCTCAATCTTC+TGG - chr2.1:675424-675443 None:intergenic 40.0%
CTTTGAATCCTCAAACTCAG+TGG - chr2.1:675633-675652 None:intergenic 40.0%
GTCCCATGTTCTTCTTTCTT+TGG - chr2.1:675400-675419 None:intergenic 40.0%
TTCCTTTGACGTAGCTATTG+AGG - chr2.1:675610-675629 None:intergenic 40.0%
! GGTGACAAACTCTACTGTTT+TGG + chr2.1:675563-675582 MS.gene90373:CDS 40.0%
! TTTTCAACAAGGGTGATTGG+TGG + chr2.1:675765-675784 MS.gene90373:CDS 40.0%
ACAGTAGAGTTTGTCACCAG+GGG - chr2.1:675561-675580 None:intergenic 45.0%
ACCAGGGGAAAACACAATGA+TGG - chr2.1:675546-675565 None:intergenic 45.0%
CAAAGGAACCACTGAGTTTG+AGG + chr2.1:675622-675641 MS.gene90373:CDS 45.0%
GTCCTCAATAGCTACGTCAA+AGG + chr2.1:675605-675624 MS.gene90373:CDS 45.0%
TTGAGGACAACGTTAGTGTC+GGG - chr2.1:675593-675612 None:intergenic 45.0%
! GCCATCATTGTGTTTTCCCC+TGG + chr2.1:675542-675561 MS.gene90373:CDS 50.0%
GGCGCAAAAGACGTTGGAGA+TGG + chr2.1:675703-675722 MS.gene90373:CDS 55.0%
! TGAGGAGGCGCAAAAGACGT+TGG + chr2.1:675697-675716 MS.gene90373:CDS 55.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 675383 675913 675383 ID=MS.gene90373
chr2.1 mRNA 675383 675913 675383 ID=MS.gene90373.t1;Parent=MS.gene90373
chr2.1 exon 675383 675913 675383 ID=MS.gene90373.t1.exon1;Parent=MS.gene90373.t1
chr2.1 CDS 675383 675913 675383 ID=cds.MS.gene90373.t1;Parent=MS.gene90373.t1
Gene Sequence

>MS.gene90373

ATGGATATGGTTAACCAAAGAAAGAAGAACATGGGACGCCAGAAGATTGAGATCAAGAAGGTTGAGAAAGATTCCAACAAACTTGTCACTTTCTCAAAAAGAAGACAAGGTTTATTCAGAAAAGCAAGCGAACTTTGTGTTTTATGTGATGTTCATGCAGCCATCATTGTGTTTTCCCCTGGTGACAAACTCTACTGTTTTGGTCAACCCGACACTAACGTTGTCCTCAATAGCTACGTCAAAGGAACCACTGAGTTTGAGGATTCAAAGTCAACTGAAAATTTTCCGACTTGCAAAGATTACAATAGACAATATGAGGAGGCGCAAAAGACGTTGGAGATGGAAAAGAAGAAACTAGAAGATGTTCAAAATTTGGCTAAGATTTTCAACAAGGGTGATTGGTGGAATGATTCAATTGATGATATGACTAGTGATCAGCTTGAACAATTTATGGTGTCCATTTACGAGTTAAAGATGAAGCTTGTTGAAAGGGCTGATGAACTTGTCATGAAGCAAAGTGTCATGCCATAG
Protein sequence

>MS.gene90373.t1

MDMVNQRKKNMGRQKIEIKKVEKDSNKLVTFSKRRQGLFRKASELCVLCDVHAAIIVFSPGDKLYCFGQPDTNVVLNSYVKGTTEFEDSKSTENFPTCKDYNRQYEEAQKTLEMEKKKLEDVQNLAKIFNKGDWWNDSIDDMTSDQLEQFMVSIYELKMKLVERADELVMKQSVMP