Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90475.t1 | XP_013457446.1 | 97.3 | 338 | 8 | 1 | 1 | 337 | 1 | 338 | 2.50E-156 | 561.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90475.t1 | O22176 | 53.3 | 351 | 116 | 12 | 1 | 337 | 1 | 317 | 5.9e-66 | 252.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90475.t1 | A0A072UP79 | 97.3 | 338 | 8 | 1 | 1 | 337 | 1 | 338 | 1.8e-156 | 561.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene90475.t1 | TF | WRKY |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90475.t1 | MTR_4g094908 | 98.521 | 338 | 4 | 1 | 1 | 337 | 1 | 338 | 0.0 | 680 |
MS.gene90475.t1 | MTR_5g016610 | 57.817 | 339 | 73 | 9 | 1 | 337 | 1 | 271 | 1.97e-113 | 330 |
MS.gene90475.t1 | MTR_1g009613 | 40.204 | 393 | 126 | 15 | 1 | 337 | 1 | 340 | 1.23e-69 | 221 |
MS.gene90475.t1 | MTR_4g127040 | 45.201 | 323 | 144 | 11 | 20 | 333 | 15 | 313 | 2.72e-67 | 214 |
MS.gene90475.t1 | MTR_1g070455 | 52.198 | 182 | 65 | 4 | 151 | 323 | 183 | 351 | 6.63e-48 | 165 |
MS.gene90475.t1 | MTR_3g108960 | 50.311 | 161 | 73 | 2 | 171 | 331 | 227 | 380 | 3.72e-43 | 154 |
MS.gene90475.t1 | MTR_0117s0040 | 65.060 | 83 | 28 | 1 | 246 | 328 | 55 | 136 | 4.66e-32 | 120 |
MS.gene90475.t1 | MTR_2g016770 | 55.172 | 87 | 37 | 2 | 239 | 324 | 9 | 94 | 4.63e-27 | 106 |
MS.gene90475.t1 | MTR_2g016770 | 54.762 | 84 | 37 | 1 | 242 | 324 | 3 | 86 | 8.84e-27 | 105 |
MS.gene90475.t1 | MTR_7g109600 | 55.814 | 86 | 34 | 1 | 241 | 322 | 25 | 110 | 1.01e-26 | 106 |
MS.gene90475.t1 | MTR_2g083870 | 58.242 | 91 | 31 | 3 | 240 | 324 | 50 | 139 | 1.32e-26 | 106 |
MS.gene90475.t1 | MTR_7g079040 | 60.976 | 82 | 27 | 2 | 241 | 322 | 135 | 211 | 5.65e-26 | 106 |
MS.gene90475.t1 | MTR_2g032030 | 56.250 | 96 | 36 | 3 | 232 | 322 | 230 | 324 | 1.22e-25 | 107 |
MS.gene90475.t1 | MTR_2g032030 | 56.250 | 96 | 36 | 3 | 232 | 322 | 230 | 324 | 1.36e-25 | 106 |
MS.gene90475.t1 | MTR_8g087000 | 53.846 | 91 | 35 | 3 | 241 | 324 | 45 | 135 | 1.42e-25 | 103 |
MS.gene90475.t1 | MTR_8g087000 | 53.933 | 89 | 34 | 3 | 243 | 324 | 48 | 136 | 4.25e-25 | 102 |
MS.gene90475.t1 | MTR_8g028565 | 58.537 | 82 | 29 | 1 | 241 | 322 | 136 | 212 | 1.46e-24 | 102 |
MS.gene90475.t1 | MTR_1g099600 | 52.941 | 85 | 35 | 1 | 239 | 323 | 164 | 243 | 1.47e-23 | 99.4 |
MS.gene90475.t1 | MTR_2g024350 | 57.576 | 66 | 28 | 0 | 258 | 323 | 1 | 66 | 3.10e-23 | 96.3 |
MS.gene90475.t1 | MTR_2g024380 | 59.091 | 66 | 27 | 0 | 258 | 323 | 244 | 309 | 1.17e-22 | 98.6 |
MS.gene90475.t1 | MTR_5g094430 | 45.545 | 101 | 43 | 2 | 241 | 330 | 195 | 294 | 1.36e-22 | 97.8 |
MS.gene90475.t1 | MTR_5g094430 | 45.545 | 101 | 43 | 2 | 241 | 330 | 217 | 316 | 1.42e-22 | 98.2 |
MS.gene90475.t1 | MTR_5g094430 | 45.545 | 101 | 43 | 2 | 241 | 330 | 329 | 428 | 1.57e-22 | 98.6 |
MS.gene90475.t1 | MTR_7g011820 | 35.795 | 176 | 90 | 5 | 174 | 327 | 297 | 471 | 2.48e-22 | 97.8 |
MS.gene90475.t1 | MTR_7g011820 | 54.839 | 62 | 25 | 3 | 262 | 322 | 224 | 283 | 2.02e-14 | 74.3 |
MS.gene90475.t1 | MTR_3g009470 | 36.628 | 172 | 90 | 5 | 180 | 333 | 392 | 562 | 6.87e-22 | 97.1 |
MS.gene90475.t1 | MTR_3g009470 | 50.877 | 57 | 26 | 2 | 266 | 322 | 281 | 335 | 3.25e-12 | 67.8 |
MS.gene90475.t1 | MTR_3g056100 | 49.474 | 95 | 39 | 2 | 241 | 327 | 370 | 463 | 1.01e-21 | 96.3 |
MS.gene90475.t1 | MTR_3g056100 | 49.474 | 95 | 39 | 2 | 241 | 327 | 226 | 319 | 1.08e-21 | 95.5 |
MS.gene90475.t1 | MTR_3g056100 | 49.474 | 95 | 39 | 2 | 241 | 327 | 239 | 332 | 1.10e-21 | 95.5 |
MS.gene90475.t1 | MTR_3g056100 | 49.474 | 95 | 39 | 2 | 241 | 327 | 383 | 476 | 1.12e-21 | 96.3 |
MS.gene90475.t1 | MTR_5g074400 | 51.765 | 85 | 37 | 2 | 249 | 330 | 401 | 484 | 2.86e-21 | 95.1 |
MS.gene90475.t1 | MTR_5g074400 | 50.877 | 57 | 26 | 2 | 266 | 322 | 244 | 298 | 1.05e-12 | 69.3 |
MS.gene90475.t1 | MTR_7g080020 | 51.136 | 88 | 39 | 2 | 249 | 333 | 474 | 560 | 3.63e-21 | 95.1 |
MS.gene90475.t1 | MTR_7g080020 | 50.000 | 58 | 27 | 2 | 266 | 323 | 281 | 336 | 7.89e-12 | 66.6 |
MS.gene90475.t1 | MTR_4g013260 | 50.633 | 79 | 35 | 2 | 249 | 324 | 317 | 394 | 3.64e-21 | 94.4 |
MS.gene90475.t1 | MTR_4g013260 | 52.632 | 57 | 26 | 1 | 266 | 322 | 185 | 240 | 2.83e-14 | 73.9 |
MS.gene90475.t1 | MTR_7g071120 | 44.554 | 101 | 52 | 2 | 230 | 330 | 292 | 388 | 3.92e-21 | 94.4 |
MS.gene90475.t1 | MTR_7g071120 | 52.632 | 57 | 25 | 2 | 266 | 322 | 167 | 221 | 1.30e-12 | 68.9 |
MS.gene90475.t1 | MTR_3g031220 | 40.517 | 116 | 53 | 3 | 230 | 330 | 315 | 429 | 4.59e-21 | 94.4 |
MS.gene90475.t1 | MTR_3g031220 | 50.000 | 66 | 31 | 2 | 266 | 331 | 199 | 262 | 5.21e-14 | 73.2 |
MS.gene90475.t1 | MTR_7g080000 | 50.000 | 86 | 39 | 2 | 245 | 327 | 409 | 493 | 1.88e-20 | 92.8 |
MS.gene90475.t1 | MTR_7g080000 | 51.724 | 58 | 26 | 2 | 266 | 323 | 235 | 290 | 4.15e-12 | 67.4 |
MS.gene90475.t1 | MTR_7g100510 | 48.000 | 75 | 38 | 1 | 261 | 335 | 357 | 430 | 2.12e-20 | 92.0 |
MS.gene90475.t1 | MTR_7g100510 | 55.556 | 63 | 25 | 3 | 261 | 322 | 184 | 244 | 4.68e-15 | 76.3 |
MS.gene90475.t1 | MTR_5g042920 | 51.220 | 82 | 36 | 2 | 249 | 327 | 301 | 381 | 3.28e-20 | 91.3 |
MS.gene90475.t1 | MTR_5g042920 | 53.846 | 65 | 27 | 3 | 261 | 324 | 146 | 208 | 3.38e-14 | 73.6 |
MS.gene90475.t1 | MTR_4g007060 | 45.455 | 88 | 45 | 1 | 238 | 322 | 98 | 185 | 8.32e-20 | 88.2 |
MS.gene90475.t1 | MTR_4g094412 | 40.952 | 105 | 43 | 1 | 239 | 324 | 189 | 293 | 9.77e-20 | 90.1 |
MS.gene90475.t1 | MTR_3g106060 | 56.897 | 58 | 25 | 0 | 266 | 323 | 139 | 196 | 1.03e-19 | 88.2 |
MS.gene90475.t1 | MTR_4g007060 | 45.455 | 88 | 45 | 1 | 238 | 322 | 132 | 219 | 1.04e-19 | 88.6 |
MS.gene90475.t1 | MTR_4g094412 | 40.952 | 105 | 43 | 1 | 239 | 324 | 198 | 302 | 1.11e-19 | 90.1 |
MS.gene90475.t1 | MTR_4g082580 | 50.000 | 82 | 37 | 2 | 249 | 327 | 259 | 339 | 2.50e-19 | 88.2 |
MS.gene90475.t1 | MTR_4g130900 | 59.649 | 57 | 22 | 1 | 266 | 322 | 360 | 415 | 2.51e-19 | 89.0 |
MS.gene90475.t1 | MTR_1g015140 | 50.704 | 71 | 34 | 1 | 252 | 322 | 89 | 158 | 4.04e-19 | 83.6 |
MS.gene90475.t1 | MTR_8g098945 | 61.404 | 57 | 22 | 0 | 266 | 322 | 130 | 186 | 4.74e-19 | 85.9 |
MS.gene90475.t1 | MTR_3g053330 | 50.685 | 73 | 36 | 0 | 252 | 324 | 238 | 310 | 5.11e-19 | 87.8 |
MS.gene90475.t1 | MTR_7g109800 | 50.000 | 74 | 36 | 1 | 249 | 322 | 129 | 201 | 5.47e-19 | 86.3 |
MS.gene90475.t1 | MTR_2g023930 | 50.000 | 76 | 38 | 0 | 249 | 324 | 289 | 364 | 5.62e-19 | 88.2 |
MS.gene90475.t1 | MTR_8g007270 | 44.578 | 83 | 42 | 2 | 244 | 323 | 130 | 211 | 6.41e-19 | 84.7 |
MS.gene90475.t1 | MTR_4g107970 | 57.627 | 59 | 25 | 0 | 266 | 324 | 179 | 237 | 1.39e-18 | 87.0 |
MS.gene90475.t1 | MTR_8g069935 | 59.649 | 57 | 23 | 0 | 266 | 322 | 332 | 388 | 1.88e-18 | 86.3 |
MS.gene90475.t1 | MTR_4g107970 | 57.627 | 59 | 25 | 0 | 266 | 324 | 256 | 314 | 2.27e-18 | 86.3 |
MS.gene90475.t1 | MTR_7g110720 | 54.839 | 62 | 28 | 0 | 266 | 327 | 190 | 251 | 2.41e-18 | 85.5 |
MS.gene90475.t1 | MTR_8g067635 | 50.000 | 76 | 38 | 0 | 258 | 333 | 342 | 417 | 2.50e-18 | 86.3 |
MS.gene90475.t1 | MTR_7g110720 | 54.839 | 62 | 28 | 0 | 266 | 327 | 217 | 278 | 2.63e-18 | 85.9 |
MS.gene90475.t1 | MTR_4g132430 | 48.684 | 76 | 39 | 0 | 249 | 324 | 111 | 186 | 3.09e-18 | 84.7 |
MS.gene90475.t1 | MTR_2g088000 | 47.368 | 76 | 40 | 0 | 249 | 324 | 333 | 408 | 3.42e-18 | 85.9 |
MS.gene90475.t1 | MTR_8g092010 | 55.556 | 63 | 27 | 1 | 262 | 324 | 105 | 166 | 3.77e-18 | 81.3 |
MS.gene90475.t1 | MTR_1g013760 | 49.231 | 65 | 33 | 0 | 266 | 330 | 141 | 205 | 3.89e-18 | 83.6 |
MS.gene90475.t1 | MTR_7g079010 | 39.806 | 103 | 50 | 3 | 231 | 322 | 96 | 197 | 4.03e-18 | 82.0 |
MS.gene90475.t1 | MTR_7g009730 | 54.839 | 62 | 28 | 0 | 266 | 327 | 220 | 281 | 4.38e-18 | 85.5 |
MS.gene90475.t1 | MTR_4g132430 | 48.684 | 76 | 39 | 0 | 249 | 324 | 245 | 320 | 5.09e-18 | 85.1 |
MS.gene90475.t1 | MTR_2g105060 | 55.000 | 60 | 27 | 0 | 263 | 322 | 92 | 151 | 6.82e-18 | 82.0 |
MS.gene90475.t1 | MTR_2g105060 | 55.000 | 60 | 27 | 0 | 263 | 322 | 167 | 226 | 8.16e-18 | 83.2 |
MS.gene90475.t1 | MTR_2g045360 | 54.839 | 62 | 28 | 0 | 266 | 327 | 212 | 273 | 8.37e-18 | 84.3 |
MS.gene90475.t1 | MTR_8g067650 | 45.263 | 95 | 51 | 1 | 240 | 333 | 313 | 407 | 1.24e-17 | 84.0 |
MS.gene90475.t1 | MTR_4g049790 | 54.839 | 62 | 28 | 0 | 266 | 327 | 313 | 374 | 1.27e-17 | 84.0 |
MS.gene90475.t1 | MTR_3g104750 | 40.816 | 98 | 54 | 2 | 225 | 322 | 67 | 160 | 4.10e-17 | 78.2 |
MS.gene90475.t1 | MTR_1g086790 | 45.238 | 84 | 43 | 2 | 241 | 322 | 132 | 214 | 5.96e-17 | 80.9 |
MS.gene90475.t1 | MTR_3g095040 | 44.186 | 86 | 44 | 2 | 240 | 322 | 90 | 174 | 7.68e-17 | 78.2 |
MS.gene90475.t1 | MTR_8g092140 | 45.455 | 77 | 37 | 2 | 251 | 323 | 142 | 217 | 1.10e-16 | 78.6 |
MS.gene90475.t1 | MTR_4g094588 | 45.070 | 71 | 38 | 1 | 252 | 322 | 165 | 234 | 1.32e-16 | 80.1 |
MS.gene90475.t1 | MTR_2g033820 | 44.706 | 85 | 46 | 1 | 248 | 332 | 186 | 269 | 1.64e-16 | 80.1 |
MS.gene90475.t1 | MTR_1g013790 | 50.000 | 62 | 31 | 0 | 263 | 324 | 99 | 160 | 1.69e-16 | 78.6 |
MS.gene90475.t1 | MTR_5g091390 | 47.887 | 71 | 36 | 1 | 252 | 322 | 144 | 213 | 1.89e-16 | 79.3 |
MS.gene90475.t1 | MTR_7g062220 | 43.478 | 92 | 47 | 3 | 232 | 322 | 93 | 180 | 2.44e-16 | 79.0 |
MS.gene90475.t1 | MTR_5g097490 | 53.448 | 58 | 26 | 1 | 266 | 323 | 253 | 309 | 2.57e-16 | 79.7 |
MS.gene90475.t1 | MTR_3g095080 | 46.053 | 76 | 37 | 2 | 251 | 323 | 127 | 201 | 2.82e-16 | 77.0 |
MS.gene90475.t1 | MTR_3g095080 | 46.053 | 76 | 37 | 2 | 251 | 323 | 151 | 225 | 3.04e-16 | 77.4 |
MS.gene90475.t1 | MTR_3g090860 | 40.187 | 107 | 50 | 6 | 234 | 333 | 100 | 199 | 3.82e-16 | 78.6 |
MS.gene90475.t1 | MTR_4g049760 | 51.613 | 62 | 30 | 0 | 266 | 327 | 291 | 352 | 1.27e-15 | 78.2 |
MS.gene90475.t1 | MTR_1g077780 | 42.353 | 85 | 48 | 1 | 246 | 330 | 43 | 126 | 2.07e-15 | 72.8 |
MS.gene90475.t1 | MTR_5g043880 | 38.947 | 95 | 55 | 2 | 241 | 333 | 98 | 191 | 2.55e-15 | 75.5 |
MS.gene90475.t1 | MTR_5g067680 | 45.882 | 85 | 42 | 3 | 240 | 320 | 175 | 259 | 4.04e-15 | 75.9 |
MS.gene90475.t1 | MTR_7g028415 | 46.875 | 64 | 33 | 1 | 261 | 324 | 89 | 151 | 5.11e-15 | 72.4 |
MS.gene90475.t1 | MTR_7g028710 | 46.875 | 64 | 33 | 1 | 261 | 324 | 89 | 151 | 5.11e-15 | 72.4 |
MS.gene90475.t1 | MTR_4g122530 | 44.595 | 74 | 40 | 1 | 249 | 322 | 192 | 264 | 1.15e-14 | 74.7 |
MS.gene90475.t1 | MTR_6g053200 | 52.632 | 57 | 27 | 0 | 266 | 322 | 331 | 387 | 1.29e-14 | 75.1 |
MS.gene90475.t1 | MTR_3g031220 | 50.000 | 66 | 31 | 2 | 266 | 331 | 199 | 262 | 3.02e-14 | 73.6 |
MS.gene90475.t1 | MTR_6g086555 | 36.735 | 98 | 49 | 3 | 239 | 324 | 169 | 265 | 8.56e-14 | 72.0 |
MS.gene90475.t1 | MTR_1g078260 | 39.623 | 106 | 48 | 5 | 230 | 323 | 204 | 305 | 1.32e-13 | 72.0 |
MS.gene90475.t1 | MTR_7g117200 | 48.438 | 64 | 31 | 1 | 266 | 327 | 119 | 182 | 2.70e-13 | 70.1 |
MS.gene90475.t1 | MTR_5g018380 | 53.448 | 58 | 24 | 2 | 265 | 322 | 123 | 177 | 3.92e-13 | 67.4 |
MS.gene90475.t1 | MTR_8g027860 | 42.529 | 87 | 46 | 3 | 237 | 320 | 108 | 193 | 1.04e-12 | 68.6 |
MS.gene90475.t1 | MTR_8g099350 | 47.368 | 57 | 28 | 1 | 266 | 320 | 133 | 189 | 1.20e-12 | 68.6 |
MS.gene90475.t1 | MTR_8g096730 | 39.189 | 74 | 43 | 2 | 262 | 334 | 67 | 139 | 1.21e-12 | 65.1 |
MS.gene90475.t1 | MTR_0229s0060 | 29.553 | 291 | 103 | 13 | 1 | 241 | 1 | 239 | 1.47e-12 | 67.0 |
MS.gene90475.t1 | MTR_3g009470 | 50.877 | 57 | 26 | 2 | 266 | 322 | 281 | 335 | 2.50e-12 | 68.2 |
MS.gene90475.t1 | MTR_0130s0060 | 62.000 | 50 | 15 | 1 | 283 | 328 | 127 | 176 | 3.88e-12 | 65.9 |
MS.gene90475.t1 | MTR_4g047580 | 45.161 | 62 | 34 | 0 | 266 | 327 | 282 | 343 | 8.84e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90475.t1 | AT2G23320 | 51.404 | 356 | 115 | 15 | 1 | 337 | 1 | 317 | 8.74e-93 | 279 |
MS.gene90475.t1 | AT4G24240 | 45.503 | 378 | 114 | 14 | 1 | 324 | 1 | 340 | 1.90e-85 | 262 |
MS.gene90475.t1 | AT4G31550 | 47.429 | 350 | 117 | 16 | 1 | 326 | 1 | 307 | 5.35e-81 | 249 |
MS.gene90475.t1 | AT4G31550 | 46.857 | 350 | 118 | 16 | 1 | 326 | 1 | 306 | 1.24e-79 | 246 |
MS.gene90475.t1 | AT2G24570 | 44.242 | 330 | 115 | 13 | 20 | 322 | 13 | 300 | 8.84e-71 | 223 |
MS.gene90475.t1 | AT2G23320 | 46.488 | 299 | 107 | 14 | 1 | 285 | 1 | 260 | 8.24e-60 | 193 |
MS.gene90475.t1 | AT5G28650 | 42.568 | 296 | 99 | 10 | 85 | 323 | 39 | 320 | 1.01e-56 | 187 |
MS.gene90475.t1 | AT3G04670 | 42.667 | 300 | 93 | 13 | 85 | 323 | 39 | 320 | 1.36e-56 | 187 |
MS.gene90475.t1 | AT4G24240 | 40.413 | 339 | 110 | 14 | 1 | 285 | 1 | 301 | 4.41e-54 | 179 |
MS.gene90475.t1 | AT2G30590 | 76.147 | 109 | 22 | 3 | 216 | 322 | 264 | 370 | 2.42e-52 | 177 |
MS.gene90475.t1 | AT4G31550 | 42.395 | 309 | 110 | 16 | 1 | 285 | 1 | 265 | 1.95e-50 | 169 |
MS.gene90475.t1 | AT1G29280 | 57.609 | 92 | 33 | 2 | 237 | 322 | 40 | 131 | 6.72e-30 | 115 |
MS.gene90475.t1 | AT3G04670 | 36.466 | 266 | 90 | 13 | 85 | 289 | 39 | 286 | 6.13e-29 | 113 |
MS.gene90475.t1 | AT2G34830 | 56.322 | 87 | 33 | 1 | 241 | 322 | 195 | 281 | 7.88e-26 | 107 |
MS.gene90475.t1 | AT2G34830 | 56.322 | 87 | 33 | 1 | 241 | 322 | 186 | 272 | 8.29e-26 | 107 |
MS.gene90475.t1 | AT3G58710 | 52.475 | 101 | 32 | 2 | 240 | 329 | 40 | 135 | 8.65e-26 | 104 |
MS.gene90475.t1 | AT4G01250 | 50.000 | 108 | 45 | 2 | 215 | 322 | 87 | 185 | 1.20e-25 | 104 |
MS.gene90475.t1 | AT1G30650 | 56.322 | 87 | 33 | 1 | 241 | 322 | 188 | 274 | 1.24e-24 | 103 |
MS.gene90475.t1 | AT3G58710 | 52.632 | 95 | 39 | 2 | 241 | 329 | 40 | 134 | 1.37e-24 | 101 |
MS.gene90475.t1 | AT2G38470 | 52.941 | 85 | 36 | 2 | 249 | 330 | 343 | 426 | 2.73e-23 | 100 |
MS.gene90475.t1 | AT2G38470 | 52.632 | 57 | 25 | 2 | 266 | 322 | 185 | 239 | 2.86e-13 | 70.9 |
MS.gene90475.t1 | AT2G04880 | 53.425 | 73 | 33 | 1 | 252 | 324 | 270 | 341 | 3.10e-21 | 94.4 |
MS.gene90475.t1 | AT2G04880 | 53.425 | 73 | 33 | 1 | 252 | 324 | 294 | 365 | 3.52e-21 | 94.4 |
MS.gene90475.t1 | AT5G26170 | 54.167 | 72 | 32 | 1 | 252 | 323 | 100 | 170 | 3.80e-21 | 89.4 |
MS.gene90475.t1 | AT5G52830 | 50.000 | 82 | 37 | 1 | 241 | 322 | 145 | 222 | 9.24e-21 | 92.0 |
MS.gene90475.t1 | AT4G23550 | 53.247 | 77 | 32 | 1 | 248 | 324 | 127 | 199 | 1.26e-20 | 90.9 |
MS.gene90475.t1 | AT4G26640 | 50.000 | 82 | 40 | 1 | 249 | 330 | 189 | 269 | 1.64e-20 | 91.7 |
MS.gene90475.t1 | AT4G26640 | 50.000 | 82 | 40 | 1 | 249 | 330 | 189 | 269 | 1.64e-20 | 91.7 |
MS.gene90475.t1 | AT4G26640 | 50.000 | 82 | 40 | 1 | 249 | 330 | 189 | 269 | 1.64e-20 | 91.7 |
MS.gene90475.t1 | AT4G26640 | 50.000 | 82 | 40 | 1 | 249 | 330 | 189 | 269 | 1.64e-20 | 91.7 |
MS.gene90475.t1 | AT5G56270 | 51.220 | 82 | 36 | 2 | 249 | 327 | 468 | 548 | 1.68e-20 | 92.8 |
MS.gene90475.t1 | AT5G56270 | 49.123 | 57 | 27 | 2 | 266 | 322 | 274 | 328 | 5.88e-11 | 63.9 |
MS.gene90475.t1 | AT4G26640 | 50.000 | 82 | 40 | 1 | 249 | 330 | 325 | 405 | 2.42e-20 | 92.0 |
MS.gene90475.t1 | AT4G26640 | 50.000 | 82 | 40 | 1 | 249 | 330 | 293 | 373 | 2.49e-20 | 92.0 |
MS.gene90475.t1 | AT4G26640 | 50.000 | 82 | 40 | 1 | 249 | 330 | 365 | 445 | 2.62e-20 | 92.0 |
MS.gene90475.t1 | AT1G13960 | 53.165 | 79 | 33 | 2 | 249 | 324 | 237 | 314 | 2.84e-20 | 90.9 |
MS.gene90475.t1 | AT1G13960 | 56.452 | 62 | 24 | 3 | 262 | 322 | 72 | 131 | 1.74e-15 | 77.0 |
MS.gene90475.t1 | AT1G13960 | 53.165 | 79 | 33 | 2 | 249 | 324 | 390 | 467 | 5.52e-20 | 91.3 |
MS.gene90475.t1 | AT1G13960 | 55.556 | 63 | 25 | 3 | 261 | 322 | 224 | 284 | 2.12e-15 | 77.4 |
MS.gene90475.t1 | AT2G03340 | 49.438 | 89 | 41 | 2 | 249 | 334 | 396 | 483 | 8.08e-20 | 90.5 |
MS.gene90475.t1 | AT2G03340 | 51.389 | 72 | 32 | 3 | 261 | 331 | 245 | 314 | 8.51e-16 | 78.6 |
MS.gene90475.t1 | AT5G07100 | 43.678 | 87 | 45 | 2 | 241 | 324 | 114 | 199 | 1.09e-19 | 86.7 |
MS.gene90475.t1 | AT5G07100 | 49.123 | 57 | 28 | 1 | 266 | 322 | 25 | 80 | 2.65e-12 | 65.9 |
MS.gene90475.t1 | AT5G07100 | 43.678 | 87 | 45 | 2 | 241 | 324 | 114 | 199 | 1.09e-19 | 86.7 |
MS.gene90475.t1 | AT5G07100 | 49.123 | 57 | 28 | 1 | 266 | 322 | 25 | 80 | 2.65e-12 | 65.9 |
MS.gene90475.t1 | AT5G07100 | 43.678 | 87 | 45 | 2 | 241 | 324 | 114 | 199 | 1.09e-19 | 86.7 |
MS.gene90475.t1 | AT5G07100 | 49.123 | 57 | 28 | 1 | 266 | 322 | 25 | 80 | 2.65e-12 | 65.9 |
MS.gene90475.t1 | AT5G07100 | 43.678 | 87 | 45 | 2 | 241 | 324 | 114 | 199 | 1.09e-19 | 86.7 |
MS.gene90475.t1 | AT5G07100 | 49.123 | 57 | 28 | 1 | 266 | 322 | 25 | 80 | 2.65e-12 | 65.9 |
MS.gene90475.t1 | AT4G30935 | 55.932 | 59 | 25 | 1 | 266 | 324 | 332 | 389 | 1.09e-19 | 90.1 |
MS.gene90475.t1 | AT5G07100 | 42.574 | 101 | 53 | 3 | 225 | 324 | 196 | 292 | 1.49e-19 | 88.2 |
MS.gene90475.t1 | AT5G07100 | 49.123 | 57 | 28 | 1 | 266 | 322 | 118 | 173 | 3.37e-12 | 66.6 |
MS.gene90475.t1 | AT3G01080 | 51.899 | 79 | 34 | 2 | 249 | 324 | 325 | 402 | 2.13e-19 | 89.0 |
MS.gene90475.t1 | AT3G01080 | 54.839 | 62 | 25 | 3 | 262 | 322 | 201 | 260 | 1.41e-14 | 74.7 |
MS.gene90475.t1 | AT4G04450 | 41.414 | 99 | 55 | 1 | 229 | 324 | 159 | 257 | 2.49e-19 | 89.0 |
MS.gene90475.t1 | AT3G01080 | 51.899 | 79 | 34 | 2 | 249 | 324 | 287 | 364 | 2.60e-19 | 88.6 |
MS.gene90475.t1 | AT3G01080 | 54.839 | 62 | 25 | 3 | 262 | 322 | 163 | 222 | 1.83e-14 | 74.3 |
MS.gene90475.t1 | AT1G68150 | 59.322 | 59 | 24 | 0 | 266 | 324 | 236 | 294 | 4.99e-19 | 87.4 |
MS.gene90475.t1 | AT4G04450 | 41.414 | 99 | 55 | 1 | 229 | 324 | 253 | 351 | 5.02e-19 | 88.2 |
MS.gene90475.t1 | AT5G64810 | 40.000 | 125 | 64 | 4 | 219 | 334 | 57 | 179 | 5.41e-19 | 84.0 |
MS.gene90475.t1 | AT1G62300 | 50.000 | 76 | 38 | 0 | 249 | 324 | 296 | 371 | 7.92e-19 | 87.8 |
MS.gene90475.t1 | AT5G15130 | 59.322 | 59 | 24 | 0 | 266 | 324 | 186 | 244 | 9.87e-19 | 87.4 |
MS.gene90475.t1 | AT2G44745 | 43.902 | 82 | 42 | 2 | 244 | 322 | 121 | 201 | 1.04e-18 | 84.0 |
MS.gene90475.t1 | AT4G39410 | 45.455 | 88 | 44 | 2 | 239 | 323 | 194 | 280 | 1.13e-18 | 85.5 |
MS.gene90475.t1 | AT5G15130 | 59.322 | 59 | 24 | 0 | 266 | 324 | 228 | 286 | 1.15e-18 | 87.4 |
MS.gene90475.t1 | AT4G22070 | 50.000 | 76 | 38 | 0 | 249 | 324 | 281 | 356 | 1.49e-18 | 87.0 |
MS.gene90475.t1 | AT4G22070 | 50.000 | 76 | 38 | 0 | 249 | 324 | 281 | 356 | 1.49e-18 | 87.0 |
MS.gene90475.t1 | AT4G22070 | 50.000 | 76 | 38 | 0 | 249 | 324 | 281 | 356 | 1.49e-18 | 87.0 |
MS.gene90475.t1 | AT4G22070 | 50.000 | 76 | 38 | 0 | 249 | 324 | 281 | 356 | 1.49e-18 | 87.0 |
MS.gene90475.t1 | AT4G26440 | 45.652 | 92 | 49 | 1 | 236 | 327 | 343 | 433 | 1.99e-18 | 86.7 |
MS.gene90475.t1 | AT4G26440 | 50.820 | 61 | 27 | 3 | 264 | 323 | 176 | 234 | 1.97e-11 | 65.5 |
MS.gene90475.t1 | AT1G29860 | 42.553 | 94 | 53 | 1 | 229 | 322 | 100 | 192 | 2.54e-18 | 84.0 |
MS.gene90475.t1 | AT5G45050 | 42.017 | 119 | 64 | 2 | 205 | 322 | 1095 | 1209 | 4.40e-18 | 85.9 |
MS.gene90475.t1 | AT5G45050 | 42.017 | 119 | 64 | 2 | 205 | 322 | 984 | 1098 | 4.77e-18 | 85.9 |
MS.gene90475.t1 | AT5G45050 | 42.017 | 119 | 64 | 2 | 205 | 322 | 1123 | 1237 | 4.80e-18 | 85.9 |
MS.gene90475.t1 | AT4G18170 | 41.667 | 84 | 48 | 1 | 241 | 324 | 148 | 230 | 8.33e-18 | 83.2 |
MS.gene90475.t1 | AT5G45260 | 48.235 | 85 | 36 | 2 | 240 | 322 | 1189 | 1267 | 8.78e-18 | 85.1 |
MS.gene90475.t1 | AT1G80840 | 48.571 | 70 | 35 | 1 | 263 | 331 | 144 | 213 | 9.61e-18 | 82.8 |
MS.gene90475.t1 | AT5G49520 | 48.649 | 74 | 37 | 1 | 249 | 322 | 205 | 277 | 1.19e-17 | 83.6 |
MS.gene90475.t1 | AT1G55600 | 48.052 | 77 | 36 | 2 | 249 | 322 | 288 | 363 | 1.48e-17 | 84.0 |
MS.gene90475.t1 | AT4G01720 | 46.341 | 82 | 38 | 1 | 243 | 324 | 223 | 298 | 2.45e-17 | 83.2 |
MS.gene90475.t1 | AT2G37260 | 54.688 | 64 | 28 | 1 | 261 | 324 | 265 | 327 | 3.52e-17 | 81.6 |
MS.gene90475.t1 | AT2G37260 | 53.448 | 58 | 25 | 2 | 266 | 323 | 86 | 141 | 1.76e-13 | 70.9 |
MS.gene90475.t1 | AT2G37260 | 54.688 | 64 | 28 | 1 | 261 | 324 | 263 | 325 | 3.66e-17 | 81.6 |
MS.gene90475.t1 | AT2G37260 | 53.448 | 58 | 25 | 2 | 266 | 323 | 84 | 139 | 1.81e-13 | 70.9 |
MS.gene90475.t1 | AT2G37260 | 57.627 | 59 | 24 | 1 | 266 | 324 | 350 | 407 | 4.00e-17 | 82.4 |
MS.gene90475.t1 | AT2G37260 | 53.448 | 58 | 25 | 2 | 266 | 323 | 166 | 221 | 1.65e-13 | 71.2 |
MS.gene90475.t1 | AT4G31800 | 45.205 | 73 | 40 | 0 | 250 | 322 | 96 | 168 | 4.85e-17 | 79.7 |
MS.gene90475.t1 | AT3G62340 | 46.914 | 81 | 42 | 1 | 242 | 322 | 95 | 174 | 5.94e-17 | 80.1 |
MS.gene90475.t1 | AT4G31800 | 45.205 | 73 | 40 | 0 | 250 | 322 | 161 | 233 | 8.07e-17 | 80.1 |
MS.gene90475.t1 | AT2G47260 | 45.238 | 84 | 44 | 2 | 239 | 322 | 149 | 230 | 9.24e-17 | 80.5 |
MS.gene90475.t1 | AT2G40740 | 39.815 | 108 | 59 | 3 | 216 | 320 | 126 | 230 | 1.13e-16 | 79.7 |
MS.gene90475.t1 | AT2G40740 | 39.815 | 108 | 59 | 3 | 216 | 320 | 135 | 239 | 1.48e-16 | 79.3 |
MS.gene90475.t1 | AT5G41570 | 41.860 | 86 | 46 | 2 | 240 | 322 | 70 | 154 | 1.52e-16 | 77.0 |
MS.gene90475.t1 | AT1G69310 | 43.902 | 82 | 42 | 2 | 244 | 322 | 123 | 203 | 2.51e-16 | 78.6 |
MS.gene90475.t1 | AT1G69310 | 43.902 | 82 | 42 | 2 | 244 | 322 | 123 | 203 | 2.51e-16 | 78.6 |
MS.gene90475.t1 | AT1G69310 | 43.902 | 82 | 42 | 2 | 244 | 322 | 123 | 203 | 2.51e-16 | 78.6 |
MS.gene90475.t1 | AT1G18860 | 55.932 | 59 | 26 | 0 | 266 | 324 | 240 | 298 | 2.59e-16 | 80.1 |
MS.gene90475.t1 | AT2G30250 | 44.737 | 76 | 41 | 1 | 252 | 327 | 315 | 389 | 2.88e-16 | 79.3 |
MS.gene90475.t1 | AT3G01970 | 47.692 | 65 | 33 | 1 | 261 | 325 | 61 | 124 | 5.05e-16 | 74.7 |
MS.gene90475.t1 | AT5G46350 | 43.836 | 73 | 40 | 1 | 252 | 324 | 170 | 241 | 8.85e-16 | 77.4 |
MS.gene90475.t1 | AT2G25000 | 51.724 | 58 | 28 | 0 | 266 | 323 | 104 | 161 | 9.61e-16 | 75.9 |
MS.gene90475.t1 | AT2G25000 | 51.724 | 58 | 28 | 0 | 266 | 323 | 104 | 161 | 9.61e-16 | 75.9 |
MS.gene90475.t1 | AT2G25000 | 51.724 | 58 | 28 | 0 | 266 | 323 | 126 | 183 | 1.67e-15 | 75.5 |
MS.gene90475.t1 | AT5G43290 | 56.140 | 57 | 24 | 1 | 266 | 322 | 115 | 170 | 2.29e-15 | 75.5 |
MS.gene90475.t1 | AT2G25000 | 51.724 | 58 | 28 | 0 | 266 | 323 | 147 | 204 | 2.33e-15 | 75.5 |
MS.gene90475.t1 | AT2G46130 | 50.000 | 62 | 30 | 1 | 261 | 322 | 26 | 86 | 2.96e-15 | 71.2 |
MS.gene90475.t1 | AT1G64000 | 49.180 | 61 | 30 | 1 | 262 | 322 | 111 | 170 | 3.60e-15 | 73.6 |
MS.gene90475.t1 | AT2G21900 | 47.297 | 74 | 35 | 2 | 266 | 336 | 110 | 182 | 4.90e-15 | 73.2 |
MS.gene90475.t1 | AT3G01080 | 54.839 | 62 | 25 | 3 | 262 | 322 | 201 | 260 | 8.02e-15 | 74.7 |
MS.gene90475.t1 | AT5G13080 | 48.387 | 62 | 31 | 1 | 261 | 322 | 63 | 123 | 1.38e-14 | 70.5 |
MS.gene90475.t1 | AT4G23810 | 38.583 | 127 | 68 | 4 | 202 | 320 | 91 | 215 | 1.23e-13 | 71.2 |
MS.gene90475.t1 | AT1G69810 | 50.000 | 60 | 29 | 1 | 266 | 324 | 204 | 263 | 7.78e-13 | 69.3 |
MS.gene90475.t1 | AT1G69810 | 50.000 | 60 | 29 | 1 | 266 | 324 | 146 | 205 | 9.04e-13 | 68.6 |
MS.gene90475.t1 | AT4G11070 | 37.288 | 118 | 67 | 3 | 206 | 320 | 53 | 166 | 2.57e-12 | 66.6 |
MS.gene90475.t1 | AT4G11070 | 37.288 | 118 | 67 | 3 | 206 | 320 | 85 | 198 | 2.96e-12 | 67.0 |
MS.gene90475.t1 | AT1G69310 | 41.463 | 82 | 40 | 3 | 244 | 322 | 123 | 199 | 4.23e-12 | 66.2 |
MS.gene90475.t1 | AT4G12020 | 49.123 | 57 | 27 | 2 | 266 | 322 | 469 | 523 | 7.84e-12 | 67.0 |
MS.gene90475.t1 | AT4G12020 | 49.123 | 57 | 27 | 2 | 266 | 322 | 469 | 523 | 7.84e-12 | 67.0 |
MS.gene90475.t1 | AT4G12020 | 49.123 | 57 | 27 | 2 | 266 | 322 | 469 | 523 | 8.15e-12 | 67.0 |
MS.gene90475.t1 | AT4G12020 | 49.123 | 57 | 27 | 2 | 266 | 322 | 469 | 523 | 8.15e-12 | 67.0 |
MS.gene90475.t1 | AT4G12020 | 49.123 | 57 | 27 | 2 | 266 | 322 | 469 | 523 | 8.49e-12 | 67.0 |
MS.gene90475.t1 | AT4G12020 | 49.123 | 57 | 27 | 2 | 266 | 322 | 469 | 523 | 8.52e-12 | 67.0 |
MS.gene90475.t1 | AT4G12020 | 49.123 | 57 | 27 | 2 | 266 | 322 | 469 | 523 | 8.57e-12 | 67.0 |
MS.gene90475.t1 | AT4G12020 | 49.123 | 57 | 27 | 2 | 266 | 322 | 469 | 523 | 8.89e-12 | 67.0 |
MS.gene90475.t1 | AT4G12020 | 49.123 | 57 | 27 | 2 | 266 | 322 | 469 | 523 | 9.21e-12 | 67.0 |
MS.gene90475.t1 | AT4G12020 | 49.123 | 57 | 27 | 2 | 266 | 322 | 402 | 456 | 9.68e-12 | 66.6 |
MS.gene90475.t1 | AT4G12020 | 49.123 | 57 | 27 | 2 | 266 | 322 | 469 | 523 | 1.14e-11 | 66.6 |
MS.gene90475.t1 | AT5G24110 | 46.032 | 63 | 32 | 1 | 266 | 326 | 114 | 176 | 1.99e-11 | 64.3 |
MS.gene90475.t1 | AT2G46130 | 46.774 | 62 | 28 | 2 | 261 | 322 | 26 | 82 | 3.65e-11 | 59.7 |
Find 67 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAATCATTTCTCTTGATTAT+AGG | 0.225392 | 8.3:-23323016 | None:intergenic |
CTAAACCAGAAGCTGCTTCT+TGG | 0.260761 | 8.3:-23322640 | None:intergenic |
TGAGATTGAAGAGGGTTGTT+AGG | 0.274491 | 8.3:+23323435 | MS.gene90475:CDS |
TTCCACCAGATGATTATTCT+TGG | 0.275431 | 8.3:+23323489 | MS.gene90475:CDS |
CAATAACAACAACGCTACTA+TGG | 0.291413 | 8.3:+23322763 | MS.gene90475:CDS |
CTCTCTACATGCTTTCTTGC+TGG | 0.296000 | 8.3:-23323899 | None:intergenic |
GCGTTGTTGTTATTGTTGTT+AGG | 0.306679 | 8.3:-23322755 | None:intergenic |
GGATGAGGTGAACCTTTAAT+AGG | 0.307884 | 8.3:-23323530 | None:intergenic |
GATTATTCTTGGAGAAAATA+TGG | 0.308918 | 8.3:+23323500 | MS.gene90475:CDS |
TATGGTCAGAAACCTATTAA+AGG | 0.337402 | 8.3:+23323518 | MS.gene90475:CDS |
GCTGTCCAAGAAGCAGCTTC+TGG | 0.338762 | 8.3:+23322635 | MS.gene90475:CDS |
TGTGATGGTGGTGGTGGTTG+TGG | 0.342656 | 8.3:-23322902 | None:intergenic |
GAAGTGTAGCTCTGAAACTT+TGG | 0.343051 | 8.3:+23323219 | MS.gene90475:CDS |
GGTGGTGGTGGTTGTGGTAA+AGG | 0.363573 | 8.3:-23322896 | None:intergenic |
CTGCTTTGGTTGTGAAAGCT+TGG | 0.372478 | 8.3:-23322604 | None:intergenic |
CGTTGTTGTTATTGTTGTTA+GGG | 0.373125 | 8.3:-23322754 | None:intergenic |
GTTCAGAAGGTTGAACTTGT+AGG | 0.380241 | 8.3:-23322928 | None:intergenic |
GCCATCTTCAAGCTAATTGC+AGG | 0.382493 | 8.3:-23323461 | None:intergenic |
AGCTCTGAAACTTTGGGTTC+TGG | 0.383492 | 8.3:+23323226 | MS.gene90475:CDS |
CTGTCTCATGTTTCATCTGT+TGG | 0.405470 | 8.3:+23323163 | MS.gene90475:CDS |
GGTGTAGCGTTGAAAATCAT+TGG | 0.411117 | 8.3:-23322950 | None:intergenic |
AAGTGTAGCTCTGAAACTTT+GGG | 0.416277 | 8.3:+23323220 | MS.gene90475:CDS |
TGAAATAACACGTTTGAACT+TGG | 0.416358 | 8.3:-23322828 | None:intergenic |
GAGATTGAAGAGGGTTGTTA+GGG | 0.422799 | 8.3:+23323436 | MS.gene90475:CDS |
TCTCTTCTTCTTCATTGAAA+AGG | 0.427957 | 8.3:+23323197 | MS.gene90475:CDS |
AGGGTTTGTGATGGTGGTGG+TGG | 0.429408 | 8.3:-23322908 | None:intergenic |
GTGATTGTGCTCTCCTTCAT+AGG | 0.430732 | 8.3:-23323954 | None:intergenic |
TTATTGTTGTTAGGGTTTGA+AGG | 0.452647 | 8.3:-23322746 | None:intergenic |
TTTCTCCAAGAATAATCATC+TGG | 0.457317 | 8.3:-23323494 | None:intergenic |
ACTTGTAGGGTTTGTGATGG+TGG | 0.459002 | 8.3:-23322914 | None:intergenic |
TTCAGAAGGTTGAACTTGTA+GGG | 0.480010 | 8.3:-23322927 | None:intergenic |
TCCTGCAATTAGCTTGAAGA+TGG | 0.484264 | 8.3:+23323460 | MS.gene90475:CDS |
TCTTTCATTTCTTCACTCAC+TGG | 0.488282 | 8.3:+23323079 | MS.gene90475:CDS |
GTTAGGGTTTGAAGGTGAAA+AGG | 0.489191 | 8.3:-23322738 | None:intergenic |
TGTAGGGTTTGTGATGGTGG+TGG | 0.490108 | 8.3:-23322911 | None:intergenic |
TTGAAAATCATTGGTTCAGA+AGG | 0.492153 | 8.3:-23322941 | None:intergenic |
AGGAAGAAGATGAAGAAGGT+TGG | 0.495301 | 8.3:-23322712 | None:intergenic |
ATGCTGGTGGTTACCTATGA+AGG | 0.503013 | 8.3:+23323941 | MS.gene90475:CDS |
TCTTGATGATGCTTCTATGC+TGG | 0.510730 | 8.3:+23323925 | MS.gene90475:CDS |
GTTTGAAGGTGAAAAGGAAG+AGG | 0.521249 | 8.3:-23322732 | None:intergenic |
ACCGTCGATGTCGTCGCCGG+CGG | 0.525117 | 8.3:+23323120 | MS.gene90475:CDS |
TCTTGATTATAGGACGGTGA+AGG | 0.526165 | 8.3:-23323006 | None:intergenic |
TACAAGTGCAGTAGTGTGAG+AGG | 0.529683 | 8.3:+23323872 | MS.gene90475:CDS |
CCGTCGATGTCGTCGCCGGC+GGG | 0.532795 | 8.3:+23323121 | MS.gene90475:CDS |
GAAGAGGAAGAAGATGAAGA+AGG | 0.545088 | 8.3:-23322716 | None:intergenic |
TAGGAAAATGAGATTGAAGA+GGG | 0.548557 | 8.3:+23323427 | MS.gene90475:CDS |
TGTTGCCACAACAATGGCCG+TGG | 0.553102 | 8.3:+23322556 | None:intergenic |
TGAACTTGTAGGGTTTGTGA+TGG | 0.556445 | 8.3:-23322917 | None:intergenic |
ATGGCCGTGGAGCTCATGAC+AGG | 0.560730 | 8.3:+23322569 | MS.gene90475:CDS |
CTCCAAGAATAATCATCTGG+TGG | 0.566598 | 8.3:-23323491 | None:intergenic |
CATTTCTCTTGATTATAGGA+CGG | 0.568226 | 8.3:-23323012 | None:intergenic |
GTAGGAAAATGAGATTGAAG+AGG | 0.572561 | 8.3:+23323426 | MS.gene90475:intron |
CTTGATTATAGGACGGTGAA+GGG | 0.579899 | 8.3:-23323005 | None:intergenic |
TGATGATGCTTCTATGCTGG+TGG | 0.581385 | 8.3:+23323928 | MS.gene90475:CDS |
ACAACCGTCGATGTCGTCGC+CGG | 0.589440 | 8.3:+23323117 | MS.gene90475:CDS |
AGGGTAGTAGAAACAGTTGG+TGG | 0.589506 | 8.3:-23322986 | None:intergenic |
TTAAAGGTTCACCTCATCCA+AGG | 0.601665 | 8.3:+23323534 | MS.gene90475:CDS |
AATTGAAAGTACCTTGGATG+AGG | 0.611960 | 8.3:-23323545 | None:intergenic |
TTCAATGAAGAAGAAGAGAG+TGG | 0.633021 | 8.3:-23323193 | None:intergenic |
CCCGCCGGCGACGACATCGA+CGG | 0.645142 | 8.3:-23323121 | None:intergenic |
GTAGCCTGTCATGAGCTCCA+CGG | 0.648816 | 8.3:-23322573 | None:intergenic |
AATGAAGAAGAAGAGAGTGG+TGG | 0.649002 | 8.3:-23323190 | None:intergenic |
GTTGGTGGAATCTGTTGCAA+AGG | 0.653955 | 8.3:-23322971 | None:intergenic |
TGAAGGGTAGTAGAAACAGT+TGG | 0.656645 | 8.3:-23322989 | None:intergenic |
ACAAGTGCAGTAGTGTGAGA+GGG | 0.679618 | 8.3:+23323873 | MS.gene90475:CDS |
ACTTTGGGTTCTGGAAAGTG+TGG | 0.685665 | 8.3:+23323235 | MS.gene90475:CDS |
GTAATCTGAAAAGCACCCGC+CGG | 0.685924 | 8.3:-23323136 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CAATATAGAAAAATAAATAA+AGG | - | chr8.3:23323348-23323367 | None:intergenic | 10.0% |
!! | AAATGTTTATGATTGATTAT+AGG | + | chr8.3:23323737-23323756 | MS.gene90475:intron | 15.0% |
!! | TATAATCAATCATAAACATT+TGG | - | chr8.3:23323738-23323757 | None:intergenic | 15.0% |
!!! | TTTTTCTTATATTCTGAATT+GGG | + | chr8.3:23323395-23323414 | MS.gene90475:intron | 15.0% |
!!! | TTTTTTCTTATATTCTGAAT+TGG | + | chr8.3:23323394-23323413 | MS.gene90475:intron | 15.0% |
!! | AAATAGGTTCATATACATAA+GGG | - | chr8.3:23323603-23323622 | None:intergenic | 20.0% |
!! | TAAATAGGTTCATATACATA+AGG | - | chr8.3:23323604-23323623 | None:intergenic | 20.0% |
!!! | AGACTATTCAAAAATTTTAG+TGG | + | chr8.3:23323711-23323730 | MS.gene90475:intron | 20.0% |
!!! | ATTTGACTTTTTTTGTGTAA+TGG | + | chr8.3:23323769-23323788 | MS.gene90475:intron | 20.0% |
!!! | TAATTTTTTGAACAATGACA+GGG | + | chr8.3:23323844-23323863 | MS.gene90475:intron | 20.0% |
!!! | TTTGACTTTTTTTGTGTAAT+GGG | + | chr8.3:23323770-23323789 | MS.gene90475:intron | 20.0% |
! | GAATCATTTCTCTTGATTAT+AGG | - | chr8.3:23323019-23323038 | None:intergenic | 25.0% |
! | GATTATTCTTGGAGAAAATA+TGG | + | chr8.3:23323500-23323519 | MS.gene90475:CDS | 25.0% |
!!! | AATTTTTTGAACAATGACAG+GGG | + | chr8.3:23323845-23323864 | MS.gene90475:intron | 25.0% |
!!! | AGATTTCACATACCTTTTTT+TGG | - | chr8.3:23323287-23323306 | None:intergenic | 25.0% |
!!! | GATTCTTTTGAAGAAAGTTT+AGG | - | chr8.3:23323320-23323339 | None:intergenic | 25.0% |
!!! | GTAATTTTTTGAACAATGAC+AGG | + | chr8.3:23323843-23323862 | MS.gene90475:intron | 25.0% |
!!! | TAATTGAATTGAAAGTACCT+TGG | - | chr8.3:23323554-23323573 | None:intergenic | 25.0% |
!!! | TTTTTTTATGTATCTGTGCT+AGG | + | chr8.3:23323680-23323699 | MS.gene90475:intron | 25.0% |
!!! | TTTTTTTGGAACAATGACAA+CGG | - | chr8.3:23323273-23323292 | None:intergenic | 25.0% |
CATTTCTCTTGATTATAGGA+CGG | - | chr8.3:23323015-23323034 | None:intergenic | 30.0% | |
GTTGTCATTGTTCCAAAAAA+AGG | + | chr8.3:23323272-23323291 | MS.gene90475:CDS | 30.0% | |
TAGGAAAATGAGATTGAAGA+GGG | + | chr8.3:23323427-23323446 | MS.gene90475:CDS | 30.0% | |
TATGGTCAGAAACCTATTAA+AGG | + | chr8.3:23323518-23323537 | MS.gene90475:CDS | 30.0% | |
TCTCTTCTTCTTCATTGAAA+AGG | + | chr8.3:23323197-23323216 | MS.gene90475:CDS | 30.0% | |
TGAAATAACACGTTTGAACT+TGG | - | chr8.3:23322831-23322850 | None:intergenic | 30.0% | |
TTTCTCCAAGAATAATCATC+TGG | - | chr8.3:23323497-23323516 | None:intergenic | 30.0% | |
! | AATTTTTCATACTCTTCTGC+TGG | + | chr8.3:23323052-23323071 | MS.gene90475:CDS | 30.0% |
! | CGTTGTTGTTATTGTTGTTA+GGG | - | chr8.3:23322757-23322776 | None:intergenic | 30.0% |
! | TTATTGTTGTTAGGGTTTGA+AGG | - | chr8.3:23322749-23322768 | None:intergenic | 30.0% |
!! | TTGAAAATCATTGGTTCAGA+AGG | - | chr8.3:23322944-23322963 | None:intergenic | 30.0% |
AGGTTCATATACATAAGGGA+AGG | - | chr8.3:23323599-23323618 | None:intergenic | 35.0% | |
CAATAACAACAACGCTACTA+TGG | + | chr8.3:23322763-23322782 | MS.gene90475:CDS | 35.0% | |
CTGCTTGAAAAAACAAGAAC+TGG | + | chr8.3:23322851-23322870 | MS.gene90475:CDS | 35.0% | |
GTAGGAAAATGAGATTGAAG+AGG | + | chr8.3:23323426-23323445 | MS.gene90475:intron | 35.0% | |
TCTTTCATTTCTTCACTCAC+TGG | + | chr8.3:23323079-23323098 | MS.gene90475:CDS | 35.0% | |
TTCAATGAAGAAGAAGAGAG+TGG | - | chr8.3:23323196-23323215 | None:intergenic | 35.0% | |
TTCAGAAGGTTGAACTTGTA+GGG | - | chr8.3:23322930-23322949 | None:intergenic | 35.0% | |
TTCCACCAGATGATTATTCT+TGG | + | chr8.3:23323489-23323508 | MS.gene90475:CDS | 35.0% | |
! | GCGTTGTTGTTATTGTTGTT+AGG | - | chr8.3:23322758-23322777 | None:intergenic | 35.0% |
!! | AAGTGTAGCTCTGAAACTTT+GGG | + | chr8.3:23323220-23323239 | MS.gene90475:CDS | 35.0% |
!! | AATTGAAAGTACCTTGGATG+AGG | - | chr8.3:23323548-23323567 | None:intergenic | 35.0% |
AATGAAGAAGAAGAGAGTGG+TGG | - | chr8.3:23323193-23323212 | None:intergenic | 40.0% | |
AGGAAGAAGATGAAGAAGGT+TGG | - | chr8.3:23322715-23322734 | None:intergenic | 40.0% | |
CTCCAAGAATAATCATCTGG+TGG | - | chr8.3:23323494-23323513 | None:intergenic | 40.0% | |
CTGTCTCATGTTTCATCTGT+TGG | + | chr8.3:23323163-23323182 | MS.gene90475:CDS | 40.0% | |
CTTGATTATAGGACGGTGAA+GGG | - | chr8.3:23323008-23323027 | None:intergenic | 40.0% | |
GAAGAGGAAGAAGATGAAGA+AGG | - | chr8.3:23322719-23322738 | None:intergenic | 40.0% | |
GAGATTGAAGAGGGTTGTTA+GGG | + | chr8.3:23323436-23323455 | MS.gene90475:CDS | 40.0% | |
GGATGAGGTGAACCTTTAAT+AGG | - | chr8.3:23323533-23323552 | None:intergenic | 40.0% | |
GTTAGGGTTTGAAGGTGAAA+AGG | - | chr8.3:23322741-23322760 | None:intergenic | 40.0% | |
GTTCAGAAGGTTGAACTTGT+AGG | - | chr8.3:23322931-23322950 | None:intergenic | 40.0% | |
GTTTGAAGGTGAAAAGGAAG+AGG | - | chr8.3:23322735-23322754 | None:intergenic | 40.0% | |
TCTTGATTATAGGACGGTGA+AGG | - | chr8.3:23323009-23323028 | None:intergenic | 40.0% | |
TGAACTTGTAGGGTTTGTGA+TGG | - | chr8.3:23322920-23322939 | None:intergenic | 40.0% | |
TGAAGGGTAGTAGAAACAGT+TGG | - | chr8.3:23322992-23323011 | None:intergenic | 40.0% | |
TGAGATTGAAGAGGGTTGTT+AGG | + | chr8.3:23323435-23323454 | MS.gene90475:CDS | 40.0% | |
TTAAAGGTTCACCTCATCCA+AGG | + | chr8.3:23323534-23323553 | MS.gene90475:CDS | 40.0% | |
! | CTGAATTGGGTTGTTACAGT+AGG | + | chr8.3:23323408-23323427 | MS.gene90475:intron | 40.0% |
! | GACAGCATTTTCTTCTGCTT+TGG | - | chr8.3:23322621-23322640 | None:intergenic | 40.0% |
! | GGTGTAGCGTTGAAAATCAT+TGG | - | chr8.3:23322953-23322972 | None:intergenic | 40.0% |
! | TCCTGCAATTAGCTTGAAGA+TGG | + | chr8.3:23323460-23323479 | MS.gene90475:CDS | 40.0% |
!! | GAAGTGTAGCTCTGAAACTT+TGG | + | chr8.3:23323219-23323238 | MS.gene90475:CDS | 40.0% |
!! | TCTTGATGATGCTTCTATGC+TGG | + | chr8.3:23323925-23323944 | MS.gene90475:CDS | 40.0% |
ACAAGTGCAGTAGTGTGAGA+GGG | + | chr8.3:23323873-23323892 | MS.gene90475:CDS | 45.0% | |
ACTTGTAGGGTTTGTGATGG+TGG | - | chr8.3:23322917-23322936 | None:intergenic | 45.0% | |
AGGGTAGTAGAAACAGTTGG+TGG | - | chr8.3:23322989-23323008 | None:intergenic | 45.0% | |
ATGCTGGTGGTTACCTATGA+AGG | + | chr8.3:23323941-23323960 | MS.gene90475:CDS | 45.0% | |
CTAAACCAGAAGCTGCTTCT+TGG | - | chr8.3:23322643-23322662 | None:intergenic | 45.0% | |
CTCTCTACATGCTTTCTTGC+TGG | - | chr8.3:23323902-23323921 | None:intergenic | 45.0% | |
CTGCTTTGGTTGTGAAAGCT+TGG | - | chr8.3:23322607-23322626 | None:intergenic | 45.0% | |
GCCATCTTCAAGCTAATTGC+AGG | - | chr8.3:23323464-23323483 | None:intergenic | 45.0% | |
GTGATTGTGCTCTCCTTCAT+AGG | - | chr8.3:23323957-23323976 | None:intergenic | 45.0% | |
TACAAGTGCAGTAGTGTGAG+AGG | + | chr8.3:23323872-23323891 | MS.gene90475:CDS | 45.0% | |
! | GTTGGTGGAATCTGTTGCAA+AGG | - | chr8.3:23322974-23322993 | None:intergenic | 45.0% |
! | TGATGATGCTTCTATGCTGG+TGG | + | chr8.3:23323928-23323947 | MS.gene90475:CDS | 45.0% |
!! | ACTTTGGGTTCTGGAAAGTG+TGG | + | chr8.3:23323235-23323254 | MS.gene90475:CDS | 45.0% |
!! | AGCTCTGAAACTTTGGGTTC+TGG | + | chr8.3:23323226-23323245 | MS.gene90475:CDS | 45.0% |
!! | AATATAGAAAAATAAATAAA+GGG | - | chr8.3:23323347-23323366 | None:intergenic | 5.0% |
!! | ATAAATTGTATAAAATAAAT+AGG | - | chr8.3:23323619-23323638 | None:intergenic | 5.0% |
!! | GTAATCTGAAAAGCACCCGC+CGG | - | chr8.3:23323139-23323158 | None:intergenic | 50.0% |
!! | TGTAGGGTTTGTGATGGTGG+TGG | - | chr8.3:23322914-23322933 | None:intergenic | 50.0% |
GCTGTCCAAGAAGCAGCTTC+TGG | + | chr8.3:23322635-23322654 | MS.gene90475:CDS | 55.0% | |
GTAGCCTGTCATGAGCTCCA+CGG | - | chr8.3:23322576-23322595 | None:intergenic | 55.0% | |
!! | AGGGTTTGTGATGGTGGTGG+TGG | - | chr8.3:23322911-23322930 | None:intergenic | 55.0% |
!! | GGTGGTGGTGGTTGTGGTAA+AGG | - | chr8.3:23322899-23322918 | None:intergenic | 55.0% |
!! | TGTGATGGTGGTGGTGGTTG+TGG | - | chr8.3:23322905-23322924 | None:intergenic | 55.0% |
ACAACCGTCGATGTCGTCGC+CGG | + | chr8.3:23323117-23323136 | MS.gene90475:CDS | 60.0% | |
ATGGCCGTGGAGCTCATGAC+AGG | + | chr8.3:23322569-23322588 | MS.gene90475:CDS | 60.0% | |
ACCGTCGATGTCGTCGCCGG+CGG | + | chr8.3:23323120-23323139 | MS.gene90475:CDS | 70.0% | |
CCCGCCGGCGACGACATCGA+CGG | - | chr8.3:23323124-23323143 | None:intergenic | 75.0% | |
CCGTCGATGTCGTCGCCGGC+GGG | + | chr8.3:23323121-23323140 | MS.gene90475:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 23322569 | 23324024 | 23322569 | ID=MS.gene90475 |
chr8.3 | mRNA | 23322569 | 23324024 | 23322569 | ID=MS.gene90475.t1;Parent=MS.gene90475 |
chr8.3 | exon | 23322569 | 23323293 | 23322569 | ID=MS.gene90475.t1.exon1;Parent=MS.gene90475.t1 |
chr8.3 | CDS | 23322569 | 23323293 | 23322569 | ID=cds.MS.gene90475.t1;Parent=MS.gene90475.t1 |
chr8.3 | exon | 23323427 | 23323555 | 23323427 | ID=MS.gene90475.t1.exon2;Parent=MS.gene90475.t1 |
chr8.3 | CDS | 23323427 | 23323555 | 23323427 | ID=cds.MS.gene90475.t1;Parent=MS.gene90475.t1 |
chr8.3 | exon | 23323865 | 23324024 | 23323865 | ID=MS.gene90475.t1.exon3;Parent=MS.gene90475.t1 |
chr8.3 | CDS | 23323865 | 23324024 | 23323865 | ID=cds.MS.gene90475.t1;Parent=MS.gene90475.t1 |
Gene Sequence |
Protein sequence |