Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90593.t1 | XP_024632961.1 | 88.1 | 713 | 73 | 3 | 1 | 701 | 81 | 793 | 0.00E+00 | 1273.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90593.t1 | Q9SZL8 | 26.8 | 598 | 372 | 10 | 6 | 601 | 104 | 637 | 1.0e-59 | 233.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90593.t1 | D3YBB9 | 79.8 | 709 | 123 | 4 | 2 | 700 | 114 | 812 | 0.0e+00 | 1139.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene90593.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90593.t1 | MTR_0558s0020 | 87.879 | 231 | 28 | 0 | 1 | 231 | 66 | 296 | 1.34e-152 | 444 |
MS.gene90593.t1 | MTR_6g090505 | 82.700 | 237 | 41 | 0 | 1 | 237 | 1 | 237 | 3.59e-142 | 420 |
MS.gene90593.t1 | MTR_6g090505 | 67.647 | 102 | 6 | 2 | 332 | 431 | 230 | 306 | 3.49e-34 | 134 |
MS.gene90593.t1 | MTR_6g090505 | 77.551 | 49 | 11 | 0 | 503 | 551 | 314 | 362 | 8.91e-12 | 67.8 |
MS.gene90593.t1 | MTR_1g083640 | 89.216 | 204 | 22 | 0 | 1 | 204 | 81 | 284 | 7.91e-136 | 401 |
MS.gene90593.t1 | MTR_8g446020 | 79.386 | 228 | 47 | 0 | 4 | 231 | 29 | 256 | 3.82e-131 | 388 |
MS.gene90593.t1 | MTR_0337s0060 | 59.494 | 316 | 28 | 4 | 383 | 695 | 21 | 239 | 7.92e-111 | 335 |
MS.gene90593.t1 | MTR_0337s0040 | 78.125 | 192 | 42 | 0 | 4 | 195 | 30 | 221 | 5.94e-106 | 322 |
MS.gene90593.t1 | MTR_2g014100 | 85.465 | 172 | 25 | 0 | 1 | 172 | 74 | 245 | 3.35e-105 | 321 |
MS.gene90593.t1 | MTR_1g055240 | 87.324 | 142 | 18 | 0 | 27 | 168 | 3 | 144 | 7.79e-87 | 270 |
MS.gene90593.t1 | MTR_0019s0290 | 81.579 | 152 | 28 | 0 | 18 | 169 | 9 | 160 | 4.60e-86 | 268 |
MS.gene90593.t1 | MTR_3g028680 | 81.457 | 151 | 25 | 1 | 554 | 701 | 1 | 151 | 5.24e-81 | 256 |
MS.gene90593.t1 | MTR_3g008240 | 84.783 | 138 | 21 | 0 | 1 | 138 | 66 | 203 | 3.68e-80 | 254 |
MS.gene90593.t1 | MTR_4g040430 | 84.058 | 138 | 18 | 1 | 1 | 138 | 65 | 198 | 2.56e-78 | 249 |
MS.gene90593.t1 | MTR_2g067090 | 78.378 | 148 | 29 | 1 | 557 | 701 | 99 | 246 | 6.13e-72 | 236 |
MS.gene90593.t1 | MTR_4g133495 | 63.536 | 181 | 40 | 2 | 512 | 689 | 88 | 245 | 3.48e-68 | 225 |
MS.gene90593.t1 | MTR_4g133340 | 63.536 | 181 | 40 | 2 | 512 | 689 | 88 | 245 | 3.48e-68 | 225 |
MS.gene90593.t1 | MTR_5g071590 | 79.612 | 103 | 21 | 0 | 1 | 103 | 78 | 180 | 1.03e-56 | 191 |
MS.gene90593.t1 | MTR_6g051425 | 33.333 | 273 | 154 | 5 | 21 | 277 | 64 | 324 | 2.81e-36 | 140 |
MS.gene90593.t1 | MTR_1281s0010 | 79.365 | 63 | 13 | 0 | 1 | 63 | 47 | 109 | 5.94e-29 | 111 |
MS.gene90593.t1 | MTR_2g067130 | 62.162 | 74 | 22 | 2 | 631 | 701 | 46 | 116 | 2.25e-18 | 83.2 |
MS.gene90593.t1 | MTR_1g070355 | 25.357 | 280 | 193 | 4 | 21 | 298 | 119 | 384 | 2.75e-16 | 83.2 |
MS.gene90593.t1 | MTR_0337s0050 | 75.000 | 36 | 9 | 0 | 195 | 230 | 14 | 49 | 1.15e-13 | 67.0 |
MS.gene90593.t1 | MTR_0402s0040 | 26.000 | 150 | 96 | 3 | 20 | 169 | 71 | 205 | 1.85e-12 | 70.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90593.t1 | AT4G38180 | 28.014 | 589 | 348 | 12 | 20 | 601 | 118 | 637 | 6.93e-69 | 241 |
MS.gene90593.t1 | AT4G15090 | 25.154 | 648 | 409 | 13 | 59 | 689 | 121 | 709 | 1.22e-59 | 216 |
MS.gene90593.t1 | AT4G15090 | 25.154 | 648 | 409 | 13 | 59 | 689 | 121 | 709 | 1.22e-59 | 216 |
MS.gene90593.t1 | AT4G15090 | 25.154 | 648 | 409 | 13 | 59 | 689 | 121 | 709 | 1.22e-59 | 216 |
MS.gene90593.t1 | AT4G15090 | 25.154 | 648 | 409 | 13 | 59 | 689 | 121 | 709 | 1.22e-59 | 216 |
MS.gene90593.t1 | AT4G15090 | 25.154 | 648 | 409 | 13 | 59 | 689 | 121 | 709 | 1.22e-59 | 216 |
MS.gene90593.t1 | AT2G27110 | 26.466 | 597 | 365 | 15 | 63 | 655 | 108 | 634 | 1.91e-54 | 201 |
MS.gene90593.t1 | AT2G27110 | 26.466 | 597 | 365 | 15 | 63 | 655 | 108 | 634 | 1.91e-54 | 201 |
MS.gene90593.t1 | AT2G27110 | 26.937 | 542 | 325 | 13 | 116 | 655 | 17 | 489 | 1.48e-53 | 196 |
MS.gene90593.t1 | AT1G76320 | 24.810 | 657 | 402 | 18 | 6 | 656 | 28 | 598 | 4.13e-49 | 183 |
MS.gene90593.t1 | AT3G06250 | 26.395 | 466 | 283 | 10 | 135 | 597 | 295 | 703 | 1.19e-48 | 183 |
MS.gene90593.t1 | AT3G06250 | 26.395 | 466 | 283 | 10 | 135 | 597 | 295 | 703 | 1.19e-48 | 183 |
MS.gene90593.t1 | AT3G06250 | 26.395 | 466 | 283 | 10 | 135 | 597 | 295 | 703 | 1.19e-48 | 183 |
MS.gene90593.t1 | AT1G76320 | 24.810 | 657 | 402 | 18 | 6 | 656 | 28 | 598 | 1.20e-48 | 183 |
MS.gene90593.t1 | AT1G76320 | 24.848 | 656 | 401 | 18 | 6 | 655 | 28 | 597 | 1.46e-48 | 182 |
MS.gene90593.t1 | AT1G76320 | 24.848 | 656 | 401 | 18 | 6 | 655 | 28 | 597 | 1.46e-48 | 182 |
MS.gene90593.t1 | AT3G22170 | 23.006 | 652 | 398 | 16 | 5 | 644 | 100 | 659 | 4.12e-47 | 179 |
MS.gene90593.t1 | AT3G22170 | 23.006 | 652 | 398 | 16 | 5 | 644 | 100 | 659 | 4.12e-47 | 179 |
MS.gene90593.t1 | AT4G38170 | 25.290 | 431 | 264 | 11 | 171 | 598 | 24 | 399 | 4.13e-44 | 167 |
MS.gene90593.t1 | AT5G18960 | 26.539 | 471 | 280 | 12 | 134 | 597 | 316 | 727 | 1.72e-42 | 165 |
MS.gene90593.t1 | AT5G18960 | 26.539 | 471 | 280 | 12 | 134 | 597 | 316 | 727 | 1.72e-42 | 165 |
MS.gene90593.t1 | AT1G10240 | 25.044 | 567 | 347 | 16 | 43 | 595 | 102 | 604 | 1.10e-39 | 156 |
MS.gene90593.t1 | AT1G10240 | 25.044 | 567 | 347 | 16 | 43 | 595 | 102 | 604 | 1.10e-39 | 156 |
MS.gene90593.t1 | AT5G28530 | 23.934 | 610 | 372 | 16 | 5 | 596 | 84 | 619 | 7.70e-38 | 150 |
MS.gene90593.t1 | AT2G32250 | 23.971 | 680 | 387 | 19 | 5 | 679 | 68 | 622 | 8.20e-38 | 151 |
MS.gene90593.t1 | AT2G32250 | 23.971 | 680 | 387 | 19 | 5 | 679 | 68 | 622 | 8.95e-38 | 151 |
MS.gene90593.t1 | AT2G32250 | 23.971 | 680 | 387 | 19 | 5 | 679 | 68 | 622 | 8.95e-38 | 151 |
MS.gene90593.t1 | AT2G32250 | 23.971 | 680 | 387 | 19 | 5 | 679 | 27 | 581 | 1.05e-37 | 150 |
MS.gene90593.t1 | AT2G32250 | 23.971 | 680 | 387 | 19 | 5 | 679 | 68 | 622 | 1.08e-37 | 150 |
MS.gene90593.t1 | AT2G32250 | 23.971 | 680 | 387 | 19 | 5 | 679 | 68 | 622 | 1.08e-37 | 150 |
MS.gene90593.t1 | AT2G32250 | 23.971 | 680 | 387 | 19 | 5 | 679 | 68 | 622 | 1.08e-37 | 150 |
MS.gene90593.t1 | AT2G32250 | 23.971 | 680 | 387 | 19 | 5 | 679 | 27 | 581 | 1.17e-37 | 150 |
MS.gene90593.t1 | AT5G28530 | 23.770 | 610 | 369 | 17 | 5 | 596 | 84 | 615 | 5.11e-37 | 148 |
MS.gene90593.t1 | AT5G28530 | 23.770 | 610 | 369 | 17 | 5 | 596 | 84 | 615 | 5.11e-37 | 148 |
MS.gene90593.t1 | AT1G80010 | 23.408 | 628 | 362 | 21 | 2 | 598 | 122 | 661 | 4.25e-34 | 139 |
MS.gene90593.t1 | AT1G52520 | 21.906 | 598 | 395 | 14 | 2 | 598 | 112 | 638 | 1.30e-31 | 131 |
MS.gene90593.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 155 | 419 | 163 | 426 | 1.12e-27 | 119 |
MS.gene90593.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 527 | 657 | 495 | 615 | 1.03e-12 | 72.0 |
MS.gene90593.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 155 | 419 | 106 | 369 | 1.15e-27 | 119 |
MS.gene90593.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 527 | 657 | 438 | 558 | 9.78e-13 | 72.0 |
MS.gene90593.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 155 | 419 | 177 | 440 | 1.23e-27 | 119 |
MS.gene90593.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 527 | 657 | 509 | 629 | 1.09e-12 | 72.0 |
MS.gene90593.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 155 | 419 | 163 | 426 | 1.28e-27 | 119 |
MS.gene90593.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 527 | 657 | 495 | 615 | 9.87e-13 | 72.0 |
MS.gene90593.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 155 | 419 | 163 | 426 | 1.28e-27 | 119 |
MS.gene90593.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 527 | 657 | 495 | 615 | 9.87e-13 | 72.0 |
MS.gene90593.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 155 | 419 | 163 | 426 | 1.42e-27 | 119 |
MS.gene90593.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 527 | 657 | 495 | 615 | 9.30e-13 | 72.4 |
MS.gene90593.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 155 | 419 | 163 | 426 | 1.42e-27 | 119 |
MS.gene90593.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 527 | 657 | 495 | 615 | 9.30e-13 | 72.4 |
MS.gene90593.t1 | AT5G28530 | 21.500 | 600 | 336 | 19 | 5 | 596 | 84 | 556 | 6.51e-19 | 91.7 |
MS.gene90593.t1 | AT5G28530 | 21.333 | 600 | 333 | 20 | 5 | 596 | 84 | 552 | 3.57e-18 | 89.4 |
Find 108 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATGCTGAGTTGGACTTTA+AGG | 0.133287 | 5.1:+35373089 | MS.gene90593:CDS |
TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 5.1:+35372780 | MS.gene90593:CDS |
AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 5.1:-35373915 | None:intergenic |
CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 5.1:+35373047 | MS.gene90593:CDS |
CAACAAGATTATGCTCTATT+TGG | 0.198611 | 5.1:+35371996 | MS.gene90593:CDS |
TTCATTTCAGCTGCCTTTCT+TGG | 0.201003 | 5.1:+35372499 | MS.gene90593:intron |
CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 5.1:+35372532 | MS.gene90593:CDS |
TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 5.1:-35372626 | None:intergenic |
TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 5.1:-35373909 | None:intergenic |
CCAAGAACAATTCACAAAAT+AGG | 0.312137 | 5.1:+35371394 | MS.gene90593:CDS |
AATCAGATTTCGACTACAAT+TGG | 0.318540 | 5.1:+35372821 | MS.gene90593:CDS |
TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 5.1:+35373761 | MS.gene90593:CDS |
GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 5.1:-35372046 | None:intergenic |
GGTTTCGAATGTTGATGTTT+TGG | 0.354913 | 5.1:+35373344 | MS.gene90593:CDS |
ACTAGCCTGGTCTGTGTATA+TGG | 0.360230 | 5.1:-35372644 | None:intergenic |
TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 5.1:+35372921 | MS.gene90593:CDS |
CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 5.1:+35373753 | MS.gene90593:CDS |
AACAATAAATATCGGCCATT+AGG | 0.388497 | 5.1:+35372053 | MS.gene90593:CDS |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 5.1:+35372045 | MS.gene90593:CDS |
GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 5.1:+35372920 | MS.gene90593:CDS |
GTCTTTAGTGCCAACATTCA+TGG | 0.395146 | 5.1:-35373637 | None:intergenic |
TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 5.1:-35371516 | None:intergenic |
AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 5.1:+35373901 | MS.gene90593:CDS |
TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 5.1:-35373891 | None:intergenic |
TTCCTTCAAATACTATTATG+AGG | 0.399583 | 5.1:+35373221 | MS.gene90593:CDS |
GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 5.1:+35373786 | MS.gene90593:CDS |
CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 5.1:+35373469 | MS.gene90593:CDS |
GATTATGATCTTCAAACCTT+GGG | 0.413114 | 5.1:-35373392 | None:intergenic |
GGGTTGTCACAGTCGACATT+AGG | 0.419786 | 5.1:+35373427 | MS.gene90593:CDS |
CGATTATGATCTTCAAACCT+TGG | 0.425681 | 5.1:-35373393 | None:intergenic |
CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 5.1:+35371693 | MS.gene90593:CDS |
AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 5.1:+35371575 | MS.gene90593:CDS |
ACAAAATAGGAAATCGGATA+AGG | 0.438571 | 5.1:+35371407 | MS.gene90593:CDS |
TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 5.1:-35372637 | None:intergenic |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 5.1:+35371558 | MS.gene90593:CDS |
CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 5.1:-35373570 | None:intergenic |
CGTTATGCTTGTAACAAAGA+AGG | 0.449439 | 5.1:+35371441 | MS.gene90593:CDS |
GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 5.1:+35371723 | MS.gene90593:CDS |
TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 5.1:+35372711 | MS.gene90593:CDS |
GGCCTACTTCGGACTTTAAG+TGG | 0.458978 | 5.1:+35372875 | MS.gene90593:CDS |
ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 5.1:+35373470 | MS.gene90593:CDS |
CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 5.1:-35373223 | None:intergenic |
TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 5.1:-35371552 | None:intergenic |
TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 5.1:+35371836 | MS.gene90593:CDS |
CAATTCACAAAATAGGAAAT+CGG | 0.489099 | 5.1:+35371401 | MS.gene90593:CDS |
CTCAAGTAGCACAAATGCTC+TGG | 0.489977 | 5.1:-35371663 | None:intergenic |
TATGAGGAGGACACAACAAA+AGG | 0.490908 | 5.1:+35373237 | MS.gene90593:CDS |
ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 5.1:-35372512 | None:intergenic |
CTGTCTATGAACCATCTGTT+GGG | 0.491412 | 5.1:+35373862 | MS.gene90593:CDS |
ATCAGATTTCGACTACAATT+GGG | 0.491708 | 5.1:+35372822 | MS.gene90593:CDS |
CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 5.1:+35371849 | MS.gene90593:CDS |
ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 5.1:+35373061 | MS.gene90593:CDS |
GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 5.1:-35373141 | None:intergenic |
GAAGCGATGGGTCAAGGAGT+TGG | 0.502080 | 5.1:+35371768 | MS.gene90593:CDS |
TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 5.1:-35371941 | None:intergenic |
AAATGCTCTGGTTTATGTAA+TGG | 0.504865 | 5.1:-35371651 | None:intergenic |
CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 5.1:+35372908 | MS.gene90593:CDS |
ATCATAATCGACTTGATGAA+AGG | 0.507955 | 5.1:+35373406 | MS.gene90593:CDS |
TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 5.1:-35371807 | None:intergenic |
GAGGGATAATCATGCTGAGT+TGG | 0.508852 | 5.1:+35373080 | MS.gene90593:CDS |
ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 5.1:+35372926 | MS.gene90593:CDS |
TGTCTATAAGATATATAAGT+GGG | 0.514682 | 5.1:+35371611 | MS.gene90593:CDS |
GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 5.1:-35373386 | None:intergenic |
TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 5.1:-35373029 | None:intergenic |
TCATAATCGACTTGATGAAA+GGG | 0.526860 | 5.1:+35373407 | MS.gene90593:CDS |
CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 5.1:-35373218 | None:intergenic |
ACTTCAACAACGCACTAGCC+TGG | 0.534735 | 5.1:-35372657 | None:intergenic |
GAGAACATCTTATGAAGCGA+TGG | 0.538371 | 5.1:+35371755 | MS.gene90593:CDS |
TAACAAAGAAGGTTTCAAGA+AGG | 0.538422 | 5.1:+35371452 | MS.gene90593:CDS |
AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 5.1:-35373024 | None:intergenic |
ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 5.1:+35373238 | MS.gene90593:CDS |
AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 5.1:+35371453 | MS.gene90593:CDS |
TCTTATGAAGCGATGGGTCA+AGG | 0.545849 | 5.1:+35371762 | MS.gene90593:CDS |
CTGAAATCCACCATGAATGT+TGG | 0.557140 | 5.1:+35373627 | MS.gene90593:CDS |
AATGAAGCTCTCTCGAAACC+AGG | 0.565261 | 5.1:+35371903 | MS.gene90593:CDS |
GCTGTCTATGAACCATCTGT+TGG | 0.568181 | 5.1:+35373861 | MS.gene90593:CDS |
TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 5.1:+35373713 | MS.gene90593:CDS |
ATGTCTATAAGATATATAAG+TGG | 0.572287 | 5.1:+35371610 | MS.gene90593:CDS |
GCGATGGGTCAAGGAGTTGG+AGG | 0.575794 | 5.1:+35371771 | MS.gene90593:CDS |
GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 5.1:-35373142 | None:intergenic |
TTTGGTGCAGTCCCAACAGA+TGG | 0.581566 | 5.1:-35373873 | None:intergenic |
TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 5.1:-35373163 | None:intergenic |
TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 5.1:+35373754 | MS.gene90593:CDS |
ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 5.1:+35373749 | MS.gene90593:CDS |
TTGAAGAAAACCTTTCCCCA+AGG | 0.594796 | 5.1:+35373376 | MS.gene90593:CDS |
TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 5.1:-35373829 | None:intergenic |
GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 5.1:+35371842 | MS.gene90593:CDS |
TTGATATCGTTGTGCTTGAG+TGG | 0.601464 | 5.1:-35373661 | None:intergenic |
AACTCGTCAAAAGGAGATGG+TGG | 0.603142 | 5.1:+35371845 | MS.gene90593:CDS |
ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 5.1:+35373716 | MS.gene90593:CDS |
ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 5.1:+35373139 | MS.gene90593:CDS |
CTTCAAATACTATTATGAGG+AGG | 0.607664 | 5.1:+35373224 | MS.gene90593:CDS |
AGAACTGGACTGTCACATGT+TGG | 0.620791 | 5.1:-35371501 | None:intergenic |
AGAACATCTTATGAAGCGAT+GGG | 0.621635 | 5.1:+35371756 | MS.gene90593:CDS |
AGCCACTTAAAGTCCGAAGT+AGG | 0.621799 | 5.1:-35372877 | None:intergenic |
GGGTCAAGGAGTTGGAGGCA+CGG | 0.624321 | 5.1:+35371776 | MS.gene90593:CDS |
ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 5.1:-35373391 | None:intergenic |
GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 5.1:+35372712 | MS.gene90593:CDS |
TTTAGTGCCAACATTCATGG+TGG | 0.641441 | 5.1:-35373634 | None:intergenic |
CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 5.1:+35373062 | MS.gene90593:CDS |
GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 5.1:-35373612 | None:intergenic |
TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 5.1:-35373183 | None:intergenic |
GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 5.1:+35373738 | MS.gene90593:CDS |
CATGTCGACATAAGAAACCC+CGG | 0.663279 | 5.1:-35373488 | None:intergenic |
TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 5.1:+35373471 | MS.gene90593:CDS |
ATGTTGATAATGATAATGAG+AGG | 0.683310 | 5.1:+35373322 | MS.gene90593:CDS |
TCAAACCATATACACAGACC+AGG | 0.683597 | 5.1:+35372639 | MS.gene90593:CDS |
TGTTGATAATGATAATGAGA+GGG | 0.689129 | 5.1:+35373323 | MS.gene90593:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGTCTATAAGATATATAAG+TGG | + | chr5.1:35371610-35371629 | MS.gene90593:CDS | 20.0% |
!! | TGTCTATAAGATATATAAGT+GGG | + | chr5.1:35371611-35371630 | MS.gene90593:CDS | 20.0% |
!!! | AATTTAATGTTCTGGTTTAT+GGG | + | chr5.1:35372228-35372247 | MS.gene90593:intron | 20.0% |
!!! | ATGATGAAAAACTGTTTTAA+TGG | + | chr5.1:35372850-35372869 | MS.gene90593:CDS | 20.0% |
!!! | TGAATGTTTATATTGATTGA+AGG | + | chr5.1:35372200-35372219 | MS.gene90593:intron | 20.0% |
! | AAAACACCTTGAAAAACATT+CGG | - | chr5.1:35372688-35372707 | None:intergenic | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | + | chr5.1:35372045-35372064 | MS.gene90593:CDS | 25.0% |
! | AGTACAAAATACTAACCTAA+TGG | - | chr5.1:35372071-35372090 | None:intergenic | 25.0% |
! | CAATTCACAAAATAGGAAAT+CGG | + | chr5.1:35371401-35371420 | MS.gene90593:CDS | 25.0% |
! | CATAATAGTATTTGAAGGAA+AGG | - | chr5.1:35373221-35373240 | None:intergenic | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | + | chr5.1:35373047-35373066 | MS.gene90593:CDS | 25.0% |
! | TGAAATTTGAATGAATGTTC+TGG | + | chr5.1:35372118-35372137 | MS.gene90593:intron | 25.0% |
! | TGAATAAATGAAAAGCAAGA+TGG | - | chr5.1:35373186-35373205 | None:intergenic | 25.0% |
! | TTCCTTCAAATACTATTATG+AGG | + | chr5.1:35373221-35373240 | MS.gene90593:CDS | 25.0% |
! | TTTCGATGAGTTAACTAATT+TGG | + | chr5.1:35372780-35372799 | MS.gene90593:CDS | 25.0% |
!! | AGGTTTAGAATTTAATGTTC+TGG | + | chr5.1:35372220-35372239 | MS.gene90593:intron | 25.0% |
!! | CAAAGTTTTCACAATTGAAA+AGG | + | chr5.1:35373281-35373300 | MS.gene90593:CDS | 25.0% |
!! | TGTTGTATTTTGTTCTGATT+TGG | + | chr5.1:35372476-35372495 | MS.gene90593:intron | 25.0% |
!!! | ATGTTGATAATGATAATGAG+AGG | + | chr5.1:35373322-35373341 | MS.gene90593:CDS | 25.0% |
!!! | GAATTTAATGTTCTGGTTTA+TGG | + | chr5.1:35372227-35372246 | MS.gene90593:intron | 25.0% |
!!! | GCTTTAATAAATTCTAAAGC+TGG | + | chr5.1:35371723-35371742 | MS.gene90593:CDS | 25.0% |
!!! | TGAAAAACTGTTTTAATGGA+AGG | + | chr5.1:35372854-35372873 | MS.gene90593:CDS | 25.0% |
!!! | TGTTGATAATGATAATGAGA+GGG | + | chr5.1:35373323-35373342 | MS.gene90593:CDS | 25.0% |
AAACACATATGATCTTTCCA+TGG | - | chr5.1:35372291-35372310 | None:intergenic | 30.0% | |
AACAAAGAAGGTTTCAAGAA+GGG | + | chr5.1:35371453-35371472 | MS.gene90593:CDS | 30.0% | |
AACAATAAATATCGGCCATT+AGG | + | chr5.1:35372053-35372072 | MS.gene90593:CDS | 30.0% | |
AAGAAAGACCAAATCCAATT+AGG | + | chr5.1:35373901-35373920 | MS.gene90593:CDS | 30.0% | |
AATCAGATTTCGACTACAAT+TGG | + | chr5.1:35372821-35372840 | MS.gene90593:CDS | 30.0% | |
ACAAAATAGGAAATCGGATA+AGG | + | chr5.1:35371407-35371426 | MS.gene90593:CDS | 30.0% | |
ATCAGATTTCGACTACAATT+GGG | + | chr5.1:35372822-35372841 | MS.gene90593:CDS | 30.0% | |
ATGATTGTCAAAACCAAGAA+AGG | - | chr5.1:35372515-35372534 | None:intergenic | 30.0% | |
ATTATGATCTTCAAACCTTG+GGG | - | chr5.1:35373394-35373413 | None:intergenic | 30.0% | |
CAACAAGATTATGCTCTATT+TGG | + | chr5.1:35371996-35372015 | MS.gene90593:CDS | 30.0% | |
CCAAGAACAATTCACAAAAT+AGG | + | chr5.1:35371394-35371413 | MS.gene90593:CDS | 30.0% | |
CTCCTCATAATAGTATTTGA+AGG | - | chr5.1:35373226-35373245 | None:intergenic | 30.0% | |
CTGGTATATGTGTGTTAATT+TGG | + | chr5.1:35372157-35372176 | MS.gene90593:intron | 30.0% | |
CTTCAAATACTATTATGAGG+AGG | + | chr5.1:35373224-35373243 | MS.gene90593:CDS | 30.0% | |
GAGAATGCAAAGAAAAATCT+CGG | + | chr5.1:35372736-35372755 | MS.gene90593:CDS | 30.0% | |
GATTATGATCTTCAAACCTT+GGG | - | chr5.1:35373395-35373414 | None:intergenic | 30.0% | |
GCCGATATTTATTGTTTGTT+CGG | - | chr5.1:35372049-35372068 | None:intergenic | 30.0% | |
TAAAGAAAAACCAGAGGAAA+GGG | + | chr5.1:35371542-35371561 | MS.gene90593:CDS | 30.0% | |
TAAAGAATCGAACAAGTGAA+TGG | - | chr5.1:35373032-35373051 | None:intergenic | 30.0% | |
TAACAAAGAAGGTTTCAAGA+AGG | + | chr5.1:35371452-35371471 | MS.gene90593:CDS | 30.0% | |
TGGATATCATAGTAAAAACC+TGG | - | chr5.1:35371924-35371943 | None:intergenic | 30.0% | |
TGGTGTATACTTGTTTACTA+CGG | - | chr5.1:35373166-35373185 | None:intergenic | 30.0% | |
TTCTTTGACCTAATTGGATT+TGG | - | chr5.1:35373912-35373931 | None:intergenic | 30.0% | |
TTTAAGTCCGAAAATCGAAA+AGG | - | chr5.1:35371810-35371829 | None:intergenic | 30.0% | |
TTTCTATTTACACAGCACAA+TGG | + | chr5.1:35372435-35372454 | MS.gene90593:intron | 30.0% | |
! | AAATGCTCTGGTTTATGTAA+TGG | - | chr5.1:35371654-35371673 | None:intergenic | 30.0% |
! | AGCTGGAATATATTTGAAGT+TGG | + | chr5.1:35371575-35371594 | MS.gene90593:CDS | 30.0% |
! | CCTATTTTGTGAATTGTTCT+TGG | - | chr5.1:35371397-35371416 | None:intergenic | 30.0% |
! | GAATCTTCCTTTTCGATTTT+CGG | + | chr5.1:35371800-35371819 | MS.gene90593:CDS | 30.0% |
! | GCATCTGAAATATTTCTCAA+CGG | + | chr5.1:35373738-35373757 | MS.gene90593:CDS | 30.0% |
! | TATGGTTTGAGGTTTCTTAT+TGG | - | chr5.1:35372629-35372648 | None:intergenic | 30.0% |
! | TCAATTCCGAATGTTTTTCA+AGG | + | chr5.1:35372679-35372698 | MS.gene90593:CDS | 30.0% |
! | TGAGGCTTTAACAATTTAAG+CGG | + | chr5.1:35374010-35374029 | MS.gene90593:intron | 30.0% |
! | TTTGGTCTTTCTTTGAACTT+TGG | - | chr5.1:35373894-35373913 | None:intergenic | 30.0% |
!! | ACATGTTTTCAAGATTTTGG+AGG | + | chr5.1:35373506-35373525 | MS.gene90593:CDS | 30.0% |
!! | ATCATAATCGACTTGATGAA+AGG | + | chr5.1:35373406-35373425 | MS.gene90593:CDS | 30.0% |
!! | ATGTTCTGGTTTAGAATTGA+AGG | + | chr5.1:35372132-35372151 | MS.gene90593:intron | 30.0% |
!! | GAGGAGTTTCTTATTTCTAA+AGG | + | chr5.1:35373786-35373805 | MS.gene90593:CDS | 30.0% |
!! | TCATAATCGACTTGATGAAA+GGG | + | chr5.1:35373407-35373426 | MS.gene90593:CDS | 30.0% |
!! | TCGACATGTTTTCAAGATTT+TGG | + | chr5.1:35373503-35373522 | MS.gene90593:CDS | 30.0% |
!!! | AAGACATAGCCAGTATTTTT+TGG | + | chr5.1:35371958-35371977 | MS.gene90593:CDS | 30.0% |
!!! | AGACATAGCCAGTATTTTTT+GGG | + | chr5.1:35371959-35371978 | MS.gene90593:CDS | 30.0% |
!!! | CTGCACAATATGTTTTAAAG+CGG | + | chr5.1:35373571-35373590 | MS.gene90593:CDS | 30.0% |
!!! | GTTTTTCAAGGTGTTTTTCA+TGG | + | chr5.1:35372691-35372710 | MS.gene90593:CDS | 30.0% |
ACATTATGGTTCAGAGAATG+AGG | + | chr5.1:35373061-35373080 | MS.gene90593:CDS | 35.0% | |
AGAACATCTTATGAAGCGAT+GGG | + | chr5.1:35371756-35371775 | MS.gene90593:CDS | 35.0% | |
CATAAATTCCAAGGCAAGAT+AGG | - | chr5.1:35372258-35372277 | None:intergenic | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | + | chr5.1:35373062-35373081 | MS.gene90593:CDS | 35.0% | |
CGAGAAGTAAATGAAGTTCA+AGG | + | chr5.1:35371693-35371712 | MS.gene90593:CDS | 35.0% | |
CGATTATGATCTTCAAACCT+TGG | - | chr5.1:35373396-35373415 | None:intergenic | 35.0% | |
CGTTATGCTTGTAACAAAGA+AGG | + | chr5.1:35371441-35371460 | MS.gene90593:CDS | 35.0% | |
CTAAAGAAAAACCAGAGGAA+AGG | + | chr5.1:35371541-35371560 | MS.gene90593:CDS | 35.0% | |
CTCATTCAAATCGTATGCAT+TGG | + | chr5.1:35372908-35372927 | MS.gene90593:CDS | 35.0% | |
GAAAGCTAAAGAAAAACCAG+AGG | + | chr5.1:35371536-35371555 | MS.gene90593:CDS | 35.0% | |
GAAGCAAAAGAAAGATGATG+AGG | + | chr5.1:35373992-35374011 | MS.gene90593:intron | 35.0% | |
GACAGAAATTCCTTATAGCT+CGG | + | chr5.1:35373967-35373986 | MS.gene90593:intron | 35.0% | |
GTCTGCTTAATCCTAAAAAC+AGG | + | chr5.1:35371478-35371497 | MS.gene90593:CDS | 35.0% | |
TCTAATGACAACTCGTCAAA+AGG | + | chr5.1:35371836-35371855 | MS.gene90593:CDS | 35.0% | |
TGTACAGAGCATAAATTCCA+AGG | - | chr5.1:35372267-35372286 | None:intergenic | 35.0% | |
TTCTCATACTCAACAAGAAC+TGG | - | chr5.1:35371519-35371538 | None:intergenic | 35.0% | |
! | CATCGTAAGAGTGTGTTATT+TGG | + | chr5.1:35372532-35372551 | MS.gene90593:CDS | 35.0% |
! | GAGGCTTTAACAATTTAAGC+GGG | + | chr5.1:35374011-35374030 | MS.gene90593:intron | 35.0% |
! | GGTTTCGAATGTTGATGTTT+TGG | + | chr5.1:35373344-35373363 | MS.gene90593:CDS | 35.0% |
! | TCTTTCAATGCTTTTCTTCG+TGG | + | chr5.1:35372991-35373010 | MS.gene90593:CDS | 35.0% |
! | TGGTTTAGAATTGAAGGTTC+TGG | + | chr5.1:35372138-35372157 | MS.gene90593:intron | 35.0% |
! | TTTTAATGGAAGGCCTACTT+CGG | + | chr5.1:35372864-35372883 | MS.gene90593:CDS | 35.0% |
! | TTTTTCATGGTCTTTGCTCA+TGG | + | chr5.1:35372704-35372723 | MS.gene90593:CDS | 35.0% |
!! | ACTGCTTTTGAAGACTTAGA+AGG | - | chr5.1:35373840-35373859 | None:intergenic | 35.0% |
!! | CGCTTTAAAACATATTGTGC+AGG | - | chr5.1:35373573-35373592 | None:intergenic | 35.0% |
!! | TATGCATTGGTCTTCAGTTT+GGG | + | chr5.1:35372921-35372940 | MS.gene90593:CDS | 35.0% |
!! | TTCAAGATTTTGGAGGTCTT+AGG | + | chr5.1:35373513-35373532 | MS.gene90593:CDS | 35.0% |
!!! | AGACATCAGCTACTTTTGAT+TGG | + | chr5.1:35372575-35372594 | MS.gene90593:CDS | 35.0% |
!!! | CACAATATGTTTTAAAGCGG+TGG | + | chr5.1:35373574-35373593 | MS.gene90593:CDS | 35.0% |
AATCGAACAAGTGAATGGTC+TGG | - | chr5.1:35373027-35373046 | None:intergenic | 40.0% | |
ACCTATGATCTTTGCATAGC+TGG | - | chr5.1:35372385-35372404 | None:intergenic | 40.0% | |
AGTCGCTTCTTTGACCTAAT+TGG | - | chr5.1:35373918-35373937 | None:intergenic | 40.0% | |
ATGAGGAGGACACAACAAAA+GGG | + | chr5.1:35373238-35373257 | MS.gene90593:CDS | 40.0% | |
ATGTCGTATGTTTGAGAACC+GGG | + | chr5.1:35373470-35373489 | MS.gene90593:CDS | 40.0% | |
ATTTATGCTCTGTACAGCCA+TGG | + | chr5.1:35372271-35372290 | MS.gene90593:intron | 40.0% | |
ATTTCTCAACGGTGTTCTTG+AGG | + | chr5.1:35373749-35373768 | MS.gene90593:CDS | 40.0% | |
CATGTCGTATGTTTGAGAAC+CGG | + | chr5.1:35373469-35373488 | MS.gene90593:CDS | 40.0% | |
CTGAAATCCACCATGAATGT+TGG | + | chr5.1:35373627-35373646 | MS.gene90593:CDS | 40.0% | |
CTGTCTATGAACCATCTGTT+GGG | + | chr5.1:35373862-35373881 | MS.gene90593:CDS | 40.0% | |
GAGAACATCTTATGAAGCGA+TGG | + | chr5.1:35371755-35371774 | MS.gene90593:CDS | 40.0% | |
GATTTCAGCTTATCGACAGA+CGG | - | chr5.1:35373615-35373634 | None:intergenic | 40.0% | |
GTCTTTAGTGCCAACATTCA+TGG | - | chr5.1:35373640-35373659 | None:intergenic | 40.0% | |
TATGAGGAGGACACAACAAA+AGG | + | chr5.1:35373237-35373256 | MS.gene90593:CDS | 40.0% | |
TCAAACCATATACACAGACC+AGG | + | chr5.1:35372639-35372658 | MS.gene90593:CDS | 40.0% | |
TCCAGCTATGCAAAGATCAT+AGG | + | chr5.1:35372381-35372400 | MS.gene90593:intron | 40.0% | |
TCCATCTGCCCAAAAAATAC+TGG | - | chr5.1:35371970-35371989 | None:intergenic | 40.0% | |
TGGTCTGTGTATATGGTTTG+AGG | - | chr5.1:35372640-35372659 | None:intergenic | 40.0% | |
TTCATTTCAGCTGCCTTTCT+TGG | + | chr5.1:35372499-35372518 | MS.gene90593:intron | 40.0% | |
TTGAAGAAAACCTTTCCCCA+AGG | + | chr5.1:35373376-35373395 | MS.gene90593:CDS | 40.0% | |
TTGATATCGTTGTGCTTGAG+TGG | - | chr5.1:35373664-35373683 | None:intergenic | 40.0% | |
TTTAGTGCCAACATTCATGG+TGG | - | chr5.1:35373637-35373656 | None:intergenic | 40.0% | |
TTTGCTTCTTCCGAGCTATA+AGG | - | chr5.1:35373980-35373999 | None:intergenic | 40.0% | |
! | TCATGCTGAGTTGGACTTTA+AGG | + | chr5.1:35373089-35373108 | MS.gene90593:CDS | 40.0% |
! | TGAAGACTTAGAAGGCGTAA+CGG | - | chr5.1:35373832-35373851 | None:intergenic | 40.0% |
!! | AAGATTTTGGAGGTCTTAGG+TGG | + | chr5.1:35373516-35373535 | MS.gene90593:CDS | 40.0% |
!! | GTATGCATTGGTCTTCAGTT+TGG | + | chr5.1:35372920-35372939 | MS.gene90593:CDS | 40.0% |
!! | TCACATGTTGGCCTGTTTTT+AGG | - | chr5.1:35371492-35371511 | None:intergenic | 40.0% |
AACTCGTCAAAAGGAGATGG+TGG | + | chr5.1:35371845-35371864 | MS.gene90593:CDS | 45.0% | |
AATGAAGCTCTCTCGAAACC+AGG | + | chr5.1:35371903-35371922 | MS.gene90593:CDS | 45.0% | |
AGAACTGGACTGTCACATGT+TGG | - | chr5.1:35371504-35371523 | None:intergenic | 45.0% | |
AGCCACTTAAAGTCCGAAGT+AGG | - | chr5.1:35372880-35372899 | None:intergenic | 45.0% | |
ATCCCAACAGTCAGCTTATG+CGG | + | chr5.1:35373139-35373158 | MS.gene90593:CDS | 45.0% | |
CATGTCGACATAAGAAACCC+CGG | - | chr5.1:35373491-35373510 | None:intergenic | 45.0% | |
CTCAAGTAGCACAAATGCTC+TGG | - | chr5.1:35371666-35371685 | None:intergenic | 45.0% | |
GAAAAACCAGAGGAAAGGGT+TGG | + | chr5.1:35371546-35371565 | MS.gene90593:CDS | 45.0% | |
GACAACTCGTCAAAAGGAGA+TGG | + | chr5.1:35371842-35371861 | MS.gene90593:CDS | 45.0% | |
GAGGGATAATCATGCTGAGT+TGG | + | chr5.1:35373080-35373099 | MS.gene90593:CDS | 45.0% | |
GATCTTCAAACCTTGGGGAA+AGG | - | chr5.1:35373389-35373408 | None:intergenic | 45.0% | |
GCTGTCTATGAACCATCTGT+TGG | + | chr5.1:35373861-35373880 | MS.gene90593:CDS | 45.0% | |
TCTTATGAAGCGATGGGTCA+AGG | + | chr5.1:35371762-35371781 | MS.gene90593:CDS | 45.0% | |
TGTCGTATGTTTGAGAACCG+GGG | + | chr5.1:35373471-35373490 | MS.gene90593:CDS | 45.0% | |
TGTCTTCTGCAGCATCAACT+TGG | - | chr5.1:35371944-35371963 | None:intergenic | 45.0% | |
TGTTCTTGAGGCAGGGAAAA+AGG | + | chr5.1:35373761-35373780 | MS.gene90593:CDS | 45.0% | |
TTACAACCAACCCTTTCCTC+TGG | - | chr5.1:35371555-35371574 | None:intergenic | 45.0% | |
! | ACTAGCCTGGTCTGTGTATA+TGG | - | chr5.1:35372647-35372666 | None:intergenic | 45.0% |
! | GTGAGGTCACATTTTACAGC+TGG | + | chr5.1:35372943-35372962 | MS.gene90593:CDS | 45.0% |
!! | ATTGGTCTTCAGTTTGGGTG+AGG | + | chr5.1:35372926-35372945 | MS.gene90593:CDS | 45.0% |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | + | chr5.1:35371558-35371577 | MS.gene90593:CDS | 45.0% |
!!! | GCCAGTATTTTTTGGGCAGA+TGG | + | chr5.1:35371966-35371985 | MS.gene90593:CDS | 45.0% |
ACTTCAACAACGCACTAGCC+TGG | - | chr5.1:35372660-35372679 | None:intergenic | 50.0% | |
GACCGCATAAGCTGACTGTT+GGG | - | chr5.1:35373144-35373163 | None:intergenic | 50.0% | |
GGCCTACTTCGGACTTTAAG+TGG | + | chr5.1:35372875-35372894 | MS.gene90593:CDS | 50.0% | |
GGGTTGTCACAGTCGACATT+AGG | + | chr5.1:35373427-35373446 | MS.gene90593:CDS | 50.0% | |
GGTCTTTGCTCATGGCACAT+GGG | + | chr5.1:35372712-35372731 | MS.gene90593:CDS | 50.0% | |
TACACGTGTTTGCGCAGATG+CGG | + | chr5.1:35373713-35373732 | MS.gene90593:CDS | 50.0% | |
TCAACGGTGTTCTTGAGGCA+GGG | + | chr5.1:35373754-35373773 | MS.gene90593:CDS | 50.0% | |
TGGGTGATCCTATCTTGCCT+TGG | + | chr5.1:35372247-35372266 | MS.gene90593:intron | 50.0% | |
TGGTCTTTGCTCATGGCACA+TGG | + | chr5.1:35372711-35372730 | MS.gene90593:CDS | 50.0% | |
! | TTTGGTGCAGTCCCAACAGA+TGG | - | chr5.1:35373876-35373895 | None:intergenic | 50.0% |
CTCAACGGTGTTCTTGAGGC+AGG | + | chr5.1:35373753-35373772 | MS.gene90593:CDS | 55.0% | |
GAAGCGATGGGTCAAGGAGT+TGG | + | chr5.1:35371768-35371787 | MS.gene90593:CDS | 55.0% | |
GGACCGCATAAGCTGACTGT+TGG | - | chr5.1:35373145-35373164 | None:intergenic | 55.0% | |
TGAGGCAGGGAAAAAGGCAG+AGG | + | chr5.1:35373767-35373786 | MS.gene90593:CDS | 55.0% | |
! | CGTCAAAAGGAGATGGTGGC+TGG | + | chr5.1:35371849-35371868 | MS.gene90593:CDS | 55.0% |
ACGTGTTTGCGCAGATGCGG+AGG | + | chr5.1:35373716-35373735 | MS.gene90593:CDS | 60.0% | |
GCGATGGGTCAAGGAGTTGG+AGG | + | chr5.1:35371771-35371790 | MS.gene90593:CDS | 60.0% | |
GGGTCAAGGAGTTGGAGGCA+CGG | + | chr5.1:35371776-35371795 | MS.gene90593:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 35371384 | 35374039 | 35371384 | ID=MS.gene90593 |
chr5.1 | mRNA | 35371384 | 35374039 | 35371384 | ID=MS.gene90593.t1;Parent=MS.gene90593 |
chr5.1 | exon | 35371384 | 35372074 | 35371384 | ID=MS.gene90593.t1.exon1;Parent=MS.gene90593.t1 |
chr5.1 | CDS | 35371384 | 35372074 | 35371384 | ID=cds.MS.gene90593.t1;Parent=MS.gene90593.t1 |
chr5.1 | exon | 35372509 | 35373922 | 35372509 | ID=MS.gene90593.t1.exon2;Parent=MS.gene90593.t1 |
chr5.1 | CDS | 35372509 | 35373922 | 35372509 | ID=cds.MS.gene90593.t1;Parent=MS.gene90593.t1 |
chr5.1 | exon | 35374030 | 35374039 | 35374030 | ID=MS.gene90593.t1.exon3;Parent=MS.gene90593.t1 |
chr5.1 | CDS | 35374030 | 35374039 | 35374030 | ID=cds.MS.gene90593.t1;Parent=MS.gene90593.t1 |
Gene Sequence |
Protein sequence |