Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90735.t1 | RHN77531.1 | 94.4 | 231 | 10 | 2 | 1 | 228 | 108 | 338 | 8.40E-76 | 293.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90735.t1 | Q9LQZ5 | 65.8 | 231 | 61 | 6 | 11 | 228 | 121 | 346 | 2.0e-41 | 170.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90735.t1 | A0A396JLJ5 | 94.4 | 231 | 10 | 2 | 1 | 228 | 108 | 338 | 6.1e-76 | 293.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene90735.t1 | TF | SRS |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90735.t1 | MTR_1g023230 | 99.174 | 121 | 0 | 1 | 1 | 120 | 108 | 228 | 6.02e-83 | 248 |
| MS.gene90735.t1 | MTR_3g112510 | 59.910 | 222 | 69 | 7 | 11 | 225 | 82 | 290 | 7.56e-73 | 223 |
| MS.gene90735.t1 | MTR_8g076620 | 54.357 | 241 | 78 | 7 | 1 | 228 | 110 | 331 | 2.45e-68 | 213 |
| MS.gene90735.t1 | MTR_5g021130 | 54.661 | 236 | 89 | 6 | 7 | 228 | 92 | 323 | 4.15e-68 | 212 |
| MS.gene90735.t1 | MTR_5g089750 | 45.062 | 162 | 81 | 3 | 15 | 168 | 249 | 410 | 1.21e-38 | 139 |
| MS.gene90735.t1 | MTR_3g014660 | 40.113 | 177 | 95 | 4 | 1 | 167 | 119 | 294 | 2.14e-35 | 128 |
| MS.gene90735.t1 | MTR_4g071110 | 41.892 | 148 | 62 | 2 | 12 | 159 | 14 | 137 | 5.98e-33 | 120 |
| MS.gene90735.t1 | MTR_8g039110 | 39.779 | 181 | 95 | 3 | 15 | 181 | 124 | 304 | 4.80e-32 | 119 |
| MS.gene90735.t1 | MTR_0363s0040 | 75.556 | 45 | 11 | 0 | 15 | 59 | 124 | 168 | 2.38e-20 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90735.t1 | AT1G75520 | 52.564 | 234 | 87 | 6 | 11 | 228 | 121 | 346 | 7.05e-73 | 225 |
| MS.gene90735.t1 | AT3G51060 | 50.424 | 236 | 90 | 4 | 13 | 228 | 142 | 370 | 5.30e-70 | 219 |
| MS.gene90735.t1 | AT1G19790 | 50.410 | 244 | 103 | 7 | 1 | 227 | 102 | 344 | 5.81e-69 | 215 |
| MS.gene90735.t1 | AT1G19790 | 50.410 | 244 | 103 | 7 | 1 | 227 | 102 | 344 | 5.81e-69 | 215 |
| MS.gene90735.t1 | AT5G66350 | 49.554 | 224 | 91 | 6 | 15 | 228 | 120 | 331 | 2.26e-63 | 200 |
| MS.gene90735.t1 | AT5G66350 | 48.402 | 219 | 91 | 6 | 15 | 223 | 120 | 326 | 1.05e-60 | 193 |
| MS.gene90735.t1 | AT5G66350 | 49.296 | 213 | 86 | 6 | 15 | 217 | 120 | 320 | 2.18e-59 | 190 |
| MS.gene90735.t1 | AT2G21400 | 42.991 | 214 | 83 | 6 | 12 | 222 | 7 | 184 | 1.96e-48 | 157 |
| MS.gene90735.t1 | AT2G21400 | 42.991 | 214 | 83 | 6 | 12 | 222 | 6 | 183 | 2.29e-48 | 157 |
| MS.gene90735.t1 | AT2G21400 | 42.180 | 211 | 74 | 6 | 12 | 222 | 7 | 169 | 2.20e-46 | 152 |
| MS.gene90735.t1 | AT2G21400 | 42.180 | 211 | 74 | 6 | 12 | 222 | 6 | 168 | 2.54e-46 | 152 |
| MS.gene90735.t1 | AT4G36260 | 52.500 | 160 | 60 | 5 | 13 | 161 | 92 | 246 | 4.23e-46 | 155 |
| MS.gene90735.t1 | AT2G18120 | 47.436 | 156 | 56 | 3 | 13 | 161 | 70 | 206 | 1.60e-41 | 141 |
| MS.gene90735.t1 | AT2G18120 | 48.344 | 151 | 60 | 2 | 13 | 161 | 70 | 204 | 5.03e-39 | 134 |
| MS.gene90735.t1 | AT5G12330 | 47.500 | 160 | 71 | 2 | 15 | 161 | 112 | 271 | 1.05e-36 | 131 |
| MS.gene90735.t1 | AT5G12330 | 47.500 | 160 | 71 | 2 | 15 | 161 | 112 | 271 | 1.05e-36 | 131 |
| MS.gene90735.t1 | AT5G12330 | 47.500 | 160 | 71 | 2 | 15 | 161 | 199 | 358 | 1.55e-36 | 132 |
| MS.gene90735.t1 | AT5G33210 | 61.538 | 91 | 32 | 1 | 13 | 103 | 15 | 102 | 8.41e-33 | 115 |
| MS.gene90735.t1 | AT5G33210 | 49.206 | 126 | 54 | 3 | 13 | 138 | 50 | 165 | 1.40e-32 | 116 |
| MS.gene90735.t1 | AT3G54430 | 34.783 | 161 | 82 | 4 | 11 | 167 | 37 | 178 | 9.14e-24 | 94.4 |
| MS.gene90735.t1 | AT5G12330 | 82.609 | 46 | 8 | 0 | 15 | 60 | 112 | 157 | 9.40e-22 | 90.1 |
Find 59 sgRNAs with CRISPR-Local
Find 74 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGATCCCTCTGGAGCTTC+TGG | 0.278538 | 1.4:+1450155 | MS.gene90735:CDS |
| AGCTCCTCTTAATGCTTTCA+TGG | 0.295162 | 1.4:+1451017 | MS.gene90735:CDS |
| CACTCATGTCTTTAGGATCT+TGG | 0.300540 | 1.4:-1451063 | None:intergenic |
| TGAATTCACCGGCGGTGTTC+AGG | 0.312818 | 1.4:+1450737 | MS.gene90735:CDS |
| TATATACCTGTGGTAGTAAT+AGG | 0.332609 | 1.4:-1450200 | None:intergenic |
| AGGTCTTCAAGTGGTGGTTT+AGG | 0.350386 | 1.4:+1449900 | MS.gene90735:CDS |
| GGTGGTGGCGAGGGTTCTTC+CGG | 0.367254 | 1.4:+1450901 | MS.gene90735:CDS |
| CCACCACCAGCAGCAGCATT+TGG | 0.392576 | 1.4:-1450886 | None:intergenic |
| CGTTCGCGGCGTTTAGCAGC+TGG | 0.397352 | 1.4:-1450050 | None:intergenic |
| CCTCTTAATGCTTTCATGGC+TGG | 0.408461 | 1.4:+1451021 | MS.gene90735:CDS |
| GTGGACAATCTTTCTTAGCT+TGG | 0.415642 | 1.4:-1449956 | None:intergenic |
| TGAGTTGTTGCTGCCGTTCG+CGG | 0.429437 | 1.4:-1450064 | None:intergenic |
| GGCGAGGGTTCTTCCGGTGG+TGG | 0.430350 | 1.4:+1450907 | MS.gene90735:CDS |
| TTGAAATTAGGGTTGGAGTT+GGG | 0.437119 | 1.4:+1450697 | MS.gene90735:intron |
| AGTGGTGGTTTAGGTGGTGG+TGG | 0.442865 | 1.4:+1449909 | MS.gene90735:CDS |
| GGTTCTTCCGGTGGTGGCAG+CGG | 0.446891 | 1.4:+1450913 | MS.gene90735:CDS |
| TTCGCCACCGCTGCCACCAC+CGG | 0.449406 | 1.4:-1450920 | None:intergenic |
| CCAAATGCTGCTGCTGGTGG+TGG | 0.457278 | 1.4:+1450886 | MS.gene90735:CDS |
| AAACTCATGTGAAAAGTACT+TGG | 0.464467 | 1.4:+1450024 | MS.gene90735:CDS |
| TGCTGCTGCTGGTGGTGGCG+AGG | 0.465038 | 1.4:+1450891 | MS.gene90735:CDS |
| TTGTATGATCAAGGACTTGA+AGG | 0.474373 | 1.4:+1450850 | MS.gene90735:CDS |
| GAAAATCAAAATGATCCCTC+TGG | 0.474468 | 1.4:+1450146 | MS.gene90735:CDS |
| TGTCTTTAGGATCTTGGAGG+TGG | 0.488834 | 1.4:-1451057 | None:intergenic |
| GCTGCTGCTGGTGGTGGCGA+GGG | 0.489260 | 1.4:+1450892 | MS.gene90735:CDS |
| TCATGTCTTTAGGATCTTGG+AGG | 0.489282 | 1.4:-1451060 | None:intergenic |
| TATAGTGAAGAATACTCAAA+TGG | 0.492700 | 1.4:-1450991 | None:intergenic |
| TCAAGTGGTGGTTTAGGTGG+TGG | 0.495997 | 1.4:+1449906 | MS.gene90735:CDS |
| ATGAAAGCATTAAGAGGAGC+TGG | 0.499046 | 1.4:-1451015 | None:intergenic |
| CCTGTGGTAGTAATAGGTAC+TGG | 0.504192 | 1.4:-1450194 | None:intergenic |
| TCTTCCGGTGGTGGCAGCGG+TGG | 0.515802 | 1.4:+1450916 | MS.gene90735:CDS |
| TCTTCAAGTGGTGGTTTAGG+TGG | 0.516785 | 1.4:+1449903 | MS.gene90735:CDS |
| AGTAATAGGTACTGGAGTAC+AGG | 0.518362 | 1.4:-1450186 | None:intergenic |
| CCAGCCATGAAAGCATTAAG+AGG | 0.523927 | 1.4:-1451021 | None:intergenic |
| TTTGAAATTAGGGTTGGAGT+TGG | 0.534737 | 1.4:+1450696 | MS.gene90735:intron |
| GGTGGTGGCAGCGGTGGCGA+AGG | 0.539736 | 1.4:+1450922 | MS.gene90735:CDS |
| TTTACACACCTGAACACCGC+CGG | 0.552531 | 1.4:-1450745 | None:intergenic |
| TCCACCGGAGCTGAATTCAC+CGG | 0.555263 | 1.4:+1450726 | MS.gene90735:CDS |
| GAACTTGTTGCAAGAGTCGA+GGG | 0.557726 | 1.4:+1449991 | MS.gene90735:CDS |
| CAGCTGCTAAACGCCGCGAA+CGG | 0.557914 | 1.4:+1450051 | MS.gene90735:CDS |
| ATTGTTAACATTTGTTGTCG+TGG | 0.557983 | 1.4:-1450968 | None:intergenic |
| GTCTTTAGGATCTTGGAGGT+GGG | 0.561171 | 1.4:-1451056 | None:intergenic |
| CCAGTACCTATTACTACCAC+AGG | 0.564967 | 1.4:+1450194 | MS.gene90735:CDS |
| CAAACTGCTGTGAACATAGG+AGG | 0.565014 | 1.4:+1450808 | MS.gene90735:CDS |
| ACTAGTCCAAATGCTGCTGC+TGG | 0.565581 | 1.4:+1450880 | MS.gene90735:CDS |
| GCCGGTGAATTCAGCTCCGG+TGG | 0.569608 | 1.4:-1450727 | None:intergenic |
| TATCAAACTGCTGTGAACAT+AGG | 0.572121 | 1.4:+1450805 | MS.gene90735:CDS |
| GGTGGCGAGGGTTCTTCCGG+TGG | 0.572206 | 1.4:+1450904 | MS.gene90735:CDS |
| ACCGCCGGTGAATTCAGCTC+CGG | 0.574562 | 1.4:-1450730 | None:intergenic |
| TAGAGAACCAGAAGCTCCAG+AGG | 0.578477 | 1.4:-1450162 | None:intergenic |
| AGTCCAAATGCTGCTGCTGG+TGG | 0.584415 | 1.4:+1450883 | MS.gene90735:CDS |
| AACTCATGTGAAAAGTACTT+GGG | 0.591492 | 1.4:+1450025 | MS.gene90735:CDS |
| AGAACTTGTTGCAAGAGTCG+AGG | 0.603647 | 1.4:+1449990 | MS.gene90735:CDS |
| GTGATGAGGTCTTCAAGTGG+TGG | 0.621009 | 1.4:+1449894 | None:intergenic |
| CAAGTTCTACATCTAAGATG+TGG | 0.632750 | 1.4:-1449975 | None:intergenic |
| GGAATGAACTGTCAAGATTG+TGG | 0.658447 | 1.4:+1449930 | MS.gene90735:CDS |
| ACCGGAGCTGAATTCACCGG+CGG | 0.668533 | 1.4:+1450729 | MS.gene90735:CDS |
| AGAGAACCAGAAGCTCCAGA+GGG | 0.671479 | 1.4:-1450161 | None:intergenic |
| GTGTGTAAAAGTGAGTGCAA+TGG | 0.678715 | 1.4:+1450759 | MS.gene90735:CDS |
| ACAGTGATGAGGTCTTCAAG+TGG | 0.705760 | 1.4:+1449891 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTGATTTGAAATTA+GGG | + | chr1.4:1450686-1450705 | MS.gene90735:intron | 10.0% |
| !!! | TTTTTATTTGATTTGAAATT+AGG | + | chr1.4:1450685-1450704 | MS.gene90735:intron | 10.0% |
| !! | ATAGAATATATAGACTAATT+AGG | - | chr1.4:1450470-1450489 | None:intergenic | 15.0% |
| !!! | TCTTTTTGAATTTTTTGATT+TGG | + | chr1.4:1450650-1450669 | MS.gene90735:intron | 15.0% |
| !! | AAAATGAAAAGATATTACGA+GGG | + | chr1.4:1450317-1450336 | MS.gene90735:intron | 20.0% |
| !! | TAAAATGAAAAGATATTACG+AGG | + | chr1.4:1450316-1450335 | MS.gene90735:intron | 20.0% |
| !! | TCTATGAATCTATGATAAAT+AGG | + | chr1.4:1450441-1450460 | MS.gene90735:intron | 20.0% |
| !!! | TAGTTTTTTGATATATAGCT+AGG | + | chr1.4:1450356-1450375 | MS.gene90735:intron | 20.0% |
| ! | TAGCTATATAGAAACAATTG+AGG | + | chr1.4:1450623-1450642 | MS.gene90735:intron | 25.0% |
| ! | TATAGTGAAGAATACTCAAA+TGG | - | chr1.4:1450994-1451013 | None:intergenic | 25.0% |
| ! | TGAAAAAATTGTTAGGTAAG+TGG | + | chr1.4:1450571-1450590 | MS.gene90735:intron | 25.0% |
| ! | TGAAGGATGAAAAAATTGTT+AGG | + | chr1.4:1450564-1450583 | MS.gene90735:intron | 25.0% |
| ! | TTTCTACATATATATACCTG+TGG | - | chr1.4:1450213-1450232 | None:intergenic | 25.0% |
| !!! | ATTTGATTTGAAATTAGGGT+TGG | + | chr1.4:1450690-1450709 | MS.gene90735:intron | 25.0% |
| TATATACCTGTGGTAGTAAT+AGG | - | chr1.4:1450203-1450222 | None:intergenic | 30.0% | |
| TTGATAGAGTATGAAAGGAA+TGG | - | chr1.4:1450497-1450516 | None:intergenic | 30.0% | |
| ! | AAGGGAATTTTGTATGATCA+AGG | + | chr1.4:1450841-1450860 | MS.gene90735:CDS | 30.0% |
| ! | TTCTCTTTCTTTTCTTCTGA+AGG | + | chr1.4:1450547-1450566 | MS.gene90735:intron | 30.0% |
| !! | AAACTCATGTGAAAAGTACT+TGG | + | chr1.4:1450024-1450043 | MS.gene90735:CDS | 30.0% |
| !! | AACTCATGTGAAAAGTACTT+GGG | + | chr1.4:1450025-1450044 | MS.gene90735:CDS | 30.0% |
| !! | ATTGTTAACATTTGTTGTCG+TGG | - | chr1.4:1450971-1450990 | None:intergenic | 30.0% |
| !! | CTAAGTTGATAGAGTATGAA+AGG | - | chr1.4:1450502-1450521 | None:intergenic | 30.0% |
| GAAAATCAAAATGATCCCTC+TGG | + | chr1.4:1450146-1450165 | MS.gene90735:CDS | 35.0% | |
| TATCAAACTGCTGTGAACAT+AGG | + | chr1.4:1450805-1450824 | MS.gene90735:CDS | 35.0% | |
| TTGAAATTAGGGTTGGAGTT+GGG | + | chr1.4:1450697-1450716 | MS.gene90735:intron | 35.0% | |
| TTGTATGATCAAGGACTTGA+AGG | + | chr1.4:1450850-1450869 | MS.gene90735:CDS | 35.0% | |
| ! | ATAGGAGGAAGAGTTTTCAA+GGG | + | chr1.4:1450823-1450842 | MS.gene90735:CDS | 35.0% |
| ! | CAAGTTCTACATCTAAGATG+TGG | - | chr1.4:1449978-1449997 | None:intergenic | 35.0% |
| ! | TTTGAAATTAGGGTTGGAGT+TGG | + | chr1.4:1450696-1450715 | MS.gene90735:intron | 35.0% |
| AGCTCCTCTTAATGCTTTCA+TGG | + | chr1.4:1451017-1451036 | MS.gene90735:CDS | 40.0% | |
| GGAATGAACTGTCAAGATTG+TGG | + | chr1.4:1449930-1449949 | MS.gene90735:CDS | 40.0% | |
| GTGGACAATCTTTCTTAGCT+TGG | - | chr1.4:1449959-1449978 | None:intergenic | 40.0% | |
| GTGTGTAAAAGTGAGTGCAA+TGG | + | chr1.4:1450759-1450778 | MS.gene90735:CDS | 40.0% | |
| ! | CATAGGAGGAAGAGTTTTCA+AGG | + | chr1.4:1450822-1450841 | MS.gene90735:CDS | 40.0% |
| !! | AGTAATAGGTACTGGAGTAC+AGG | - | chr1.4:1450189-1450208 | None:intergenic | 40.0% |
| !! | ATGAAAGCATTAAGAGGAGC+TGG | - | chr1.4:1451018-1451037 | None:intergenic | 40.0% |
| AGGTCTTCAAGTGGTGGTTT+AGG | + | chr1.4:1449900-1449919 | MS.gene90735:CDS | 45.0% | |
| CAAACTGCTGTGAACATAGG+AGG | + | chr1.4:1450808-1450827 | MS.gene90735:CDS | 45.0% | |
| CCAGTACCTATTACTACCAC+AGG | + | chr1.4:1450194-1450213 | MS.gene90735:CDS | 45.0% | |
| CCTCTTAATGCTTTCATGGC+TGG | + | chr1.4:1451021-1451040 | MS.gene90735:CDS | 45.0% | |
| CCTGTGGTAGTAATAGGTAC+TGG | - | chr1.4:1450197-1450216 | None:intergenic | 45.0% | |
| GCTTAGTGATAGAGATCTCG+AGG | + | chr1.4:1450405-1450424 | MS.gene90735:intron | 45.0% | |
| TCTTCAAGTGGTGGTTTAGG+TGG | + | chr1.4:1449903-1449922 | MS.gene90735:CDS | 45.0% | |
| ! | GGAGTTGGGAAATTTTCCAC+CGG | + | chr1.4:1450711-1450730 | MS.gene90735:CDS | 45.0% |
| !! | AGAACTTGTTGCAAGAGTCG+AGG | + | chr1.4:1449990-1450009 | MS.gene90735:CDS | 45.0% |
| !! | CCAGCCATGAAAGCATTAAG+AGG | - | chr1.4:1451024-1451043 | None:intergenic | 45.0% |
| !! | GAACTTGTTGCAAGAGTCGA+GGG | + | chr1.4:1449991-1450010 | MS.gene90735:CDS | 45.0% |
| ACTAGTCCAAATGCTGCTGC+TGG | + | chr1.4:1450880-1450899 | MS.gene90735:CDS | 50.0% | |
| AGAGAACCAGAAGCTCCAGA+GGG | - | chr1.4:1450164-1450183 | None:intergenic | 50.0% | |
| TAGAGAACCAGAAGCTCCAG+AGG | - | chr1.4:1450165-1450184 | None:intergenic | 50.0% | |
| TCAAGTGGTGGTTTAGGTGG+TGG | + | chr1.4:1449906-1449925 | MS.gene90735:CDS | 50.0% | |
| TTTACACACCTGAACACCGC+CGG | - | chr1.4:1450748-1450767 | None:intergenic | 50.0% | |
| !! | AATGATCCCTCTGGAGCTTC+TGG | + | chr1.4:1450155-1450174 | MS.gene90735:CDS | 50.0% |
| AGTCCAAATGCTGCTGCTGG+TGG | + | chr1.4:1450883-1450902 | MS.gene90735:CDS | 55.0% | |
| TCCACCGGAGCTGAATTCAC+CGG | + | chr1.4:1450726-1450745 | MS.gene90735:CDS | 55.0% | |
| TGAATTCACCGGCGGTGTTC+AGG | + | chr1.4:1450737-1450756 | MS.gene90735:CDS | 55.0% | |
| TGAGTTGTTGCTGCCGTTCG+CGG | - | chr1.4:1450067-1450086 | None:intergenic | 55.0% | |
| ! | AGTGGTGGTTTAGGTGGTGG+TGG | + | chr1.4:1449909-1449928 | MS.gene90735:CDS | 55.0% |
| ACCGCCGGTGAATTCAGCTC+CGG | - | chr1.4:1450733-1450752 | None:intergenic | 60.0% | |
| ACCGGAGCTGAATTCACCGG+CGG | + | chr1.4:1450729-1450748 | MS.gene90735:CDS | 60.0% | |
| CAGCTGCTAAACGCCGCGAA+CGG | + | chr1.4:1450051-1450070 | MS.gene90735:CDS | 60.0% | |
| CCAAATGCTGCTGCTGGTGG+TGG | + | chr1.4:1450886-1450905 | MS.gene90735:CDS | 60.0% | |
| CCACCACCAGCAGCAGCATT+TGG | - | chr1.4:1450889-1450908 | None:intergenic | 60.0% | |
| CGTTCGCGGCGTTTAGCAGC+TGG | - | chr1.4:1450053-1450072 | None:intergenic | 65.0% | |
| GCCGGTGAATTCAGCTCCGG+TGG | - | chr1.4:1450730-1450749 | None:intergenic | 65.0% | |
| ! | GGTGGTGGCGAGGGTTCTTC+CGG | + | chr1.4:1450901-1450920 | MS.gene90735:CDS | 65.0% |
| ! | GGTTCTTCCGGTGGTGGCAG+CGG | + | chr1.4:1450913-1450932 | MS.gene90735:CDS | 65.0% |
| GGCGAGGGTTCTTCCGGTGG+TGG | + | chr1.4:1450907-1450926 | MS.gene90735:CDS | 70.0% | |
| GGTGGCGAGGGTTCTTCCGG+TGG | + | chr1.4:1450904-1450923 | MS.gene90735:CDS | 70.0% | |
| TTCGCCACCGCTGCCACCAC+CGG | - | chr1.4:1450923-1450942 | None:intergenic | 70.0% | |
| ! | TCTTCCGGTGGTGGCAGCGG+TGG | + | chr1.4:1450916-1450935 | MS.gene90735:CDS | 70.0% |
| !! | GCTGCTGCTGGTGGTGGCGA+GGG | + | chr1.4:1450892-1450911 | MS.gene90735:CDS | 70.0% |
| !! | TGCTGCTGCTGGTGGTGGCG+AGG | + | chr1.4:1450891-1450910 | MS.gene90735:CDS | 70.0% |
| ! | GGTGGTGGCAGCGGTGGCGA+AGG | + | chr1.4:1450922-1450941 | MS.gene90735:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 1449897 | 1451074 | 1449897 | ID=MS.gene90735 |
| chr1.4 | mRNA | 1449897 | 1451074 | 1449897 | ID=MS.gene90735.t1;Parent=MS.gene90735 |
| chr1.4 | exon | 1449897 | 1450215 | 1449897 | ID=MS.gene90735.t1.exon1;Parent=MS.gene90735.t1 |
| chr1.4 | CDS | 1449897 | 1450215 | 1449897 | ID=cds.MS.gene90735.t1;Parent=MS.gene90735.t1 |
| chr1.4 | exon | 1450707 | 1451074 | 1450707 | ID=MS.gene90735.t1.exon2;Parent=MS.gene90735.t1 |
| chr1.4 | CDS | 1450707 | 1451074 | 1450707 | ID=cds.MS.gene90735.t1;Parent=MS.gene90735.t1 |
| Gene Sequence |
| Protein sequence |
