AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene90805

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene90805.t1 MTR_1g116010 72.807 228 26 3 10 202 20 246 2.67e-111 318
MS.gene90805.t1 MTR_1g094930 48.837 258 62 11 12 201 74 329 6.18e-59 188
MS.gene90805.t1 MTR_1g094930 45.726 234 59 9 35 201 2 234 5.84e-48 157
MS.gene90805.t1 MTR_4g071590 41.451 193 92 5 10 202 119 290 3.46e-38 133
MS.gene90805.t1 MTR_4g471590 41.451 193 92 5 10 202 119 290 3.46e-38 133
MS.gene90805.t1 MTR_2g094600 46.243 173 63 5 36 192 129 287 4.29e-37 131
MS.gene90805.t1 MTR_8g013950 41.451 193 83 5 11 185 110 290 7.20e-37 131
MS.gene90805.t1 MTR_8g076340 40.415 193 89 5 16 196 113 291 4.45e-36 128
MS.gene90805.t1 MTR_1g006650 41.885 191 87 6 16 185 111 298 1.75e-35 127
MS.gene90805.t1 MTR_4g058910 76.923 65 15 0 121 185 314 378 4.76e-33 122
MS.gene90805.t1 MTR_3g117380 40.223 179 101 2 11 185 117 293 8.82e-33 120
MS.gene90805.t1 MTR_5g021340 37.668 223 95 6 11 196 158 373 9.04e-33 121
MS.gene90805.t1 MTR_3g109760 41.053 190 88 6 11 185 91 271 1.60e-32 119
MS.gene90805.t1 MTR_6g032830 73.134 67 18 0 120 186 191 257 4.17e-32 117
MS.gene90805.t1 MTR_1g046680 70.000 70 21 0 116 185 167 236 7.29e-32 115
MS.gene90805.t1 MTR_7g085410 69.565 69 21 0 118 186 185 253 3.59e-31 114
MS.gene90805.t1 MTR_5g007600 64.865 74 26 0 116 189 254 327 4.73e-31 115
MS.gene90805.t1 MTR_5g007600 63.768 69 25 0 116 184 152 220 7.99e-28 107
MS.gene90805.t1 MTR_7g446110 61.290 62 24 0 121 182 187 248 2.31e-21 88.6
MS.gene90805.t1 MTR_7g445980 62.712 59 21 1 125 182 37 95 1.35e-19 80.1
MS.gene90805.t1 MTR_7g445950 51.515 66 32 0 117 182 116 181 1.73e-18 79.7
MS.gene90805.t1 MTR_7g446070 51.515 66 32 0 117 182 128 193 5.79e-18 78.6
MS.gene90805.t1 MTR_4g039780 71.642 67 19 0 30 96 13 79 3.40e-15 68.9
MS.gene90805.t1 MTR_5g020230 46.296 54 29 0 100 153 101 154 3.34e-13 66.2
MS.gene90805.t1 MTR_7g112330 56.522 46 19 1 114 158 14 59 7.33e-13 63.2
MS.gene90805.t1 MTR_2g059300 77.419 31 7 0 114 144 24 54 3.08e-12 59.7
MS.gene90805.t1 MTR_8g077510 61.111 36 14 0 118 153 122 157 1.08e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene90805.t1 AT4G36240 41.758 182 89 3 11 191 69 234 5.93e-39 134
MS.gene90805.t1 AT3G54810 79.167 72 15 0 120 191 228 299 2.41e-36 129
MS.gene90805.t1 AT3G54810 79.167 72 15 0 120 191 228 299 2.41e-36 129
MS.gene90805.t1 AT3G24050 60.825 97 32 1 99 195 178 268 7.58e-36 127
MS.gene90805.t1 AT1G08010 70.513 78 20 1 115 192 214 288 1.41e-35 127
MS.gene90805.t1 AT1G08010 70.513 78 20 1 115 192 214 288 1.41e-35 127
MS.gene90805.t1 AT1G08010 70.513 78 20 1 115 192 214 288 1.41e-35 127
MS.gene90805.t1 AT5G66320 37.445 227 101 7 10 199 107 329 1.10e-34 125
MS.gene90805.t1 AT5G66320 37.445 227 101 7 10 199 107 329 1.10e-34 125
MS.gene90805.t1 AT4G32890 39.362 188 100 4 11 185 75 261 5.41e-34 123
MS.gene90805.t1 AT1G08000 50.735 136 51 4 65 185 148 282 1.30e-33 122
MS.gene90805.t1 AT1G08000 50.735 136 51 4 65 185 148 282 1.30e-33 122
MS.gene90805.t1 AT5G25830 41.748 206 80 7 16 185 82 283 2.11e-33 122
MS.gene90805.t1 AT4G34680 38.579 197 69 6 12 195 97 254 4.67e-33 119
MS.gene90805.t1 AT4G34680 38.579 197 69 6 12 195 97 254 4.67e-33 119
MS.gene90805.t1 AT3G60530 38.974 195 81 5 11 199 72 234 7.85e-33 118
MS.gene90805.t1 AT2G45050 40.206 194 85 6 11 189 74 251 2.50e-32 117
MS.gene90805.t1 AT3G51080 66.667 75 23 1 121 195 221 293 5.44e-31 115
MS.gene90805.t1 AT2G28340 67.606 71 20 1 123 193 193 260 4.77e-29 109
MS.gene90805.t1 AT3G45170 54.545 77 35 0 113 189 107 183 2.15e-27 103
MS.gene90805.t1 AT4G36620 58.333 36 15 0 118 153 72 107 1.38e-11 61.6
MS.gene90805.t1 AT2G18380 60.000 35 14 0 119 153 90 124 6.45e-11 59.7
MS.gene90805.t1 AT3G50870 58.333 36 15 0 118 153 149 184 7.72e-11 60.5

Find 54 sgRNAs with CRISPR-Local

Find 97 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGGGTGAACTTATGCTTTC+AGG 0.155842 1.4:-88044583 None:intergenic
CTAGCAACAGGCCGGTATTC+AGG 0.202243 1.4:-88044904 None:intergenic
TTCTTTGAAGCACGAGTTTC+AGG 0.203835 1.4:-88043562 None:intergenic
AAAAGAATCGTCCACAATAT+TGG 0.266415 1.4:-88044488 None:intergenic
GGGAAATGACATTCTTTCAT+TGG 0.338146 1.4:+88044456 MS.gene90805:intron
AGACGCAAGGATAATAATTC+TGG 0.376327 1.4:+88044991 MS.gene90805:CDS
GTCTCATCACTCTCATTTCA+AGG 0.395161 1.4:-88044972 None:intergenic
GAGTTTCAGGTTTGTATCAA+TGG 0.419520 1.4:-88043549 None:intergenic
GAAAATGTTGGGCTAGCAAC+AGG 0.436477 1.4:-88044916 None:intergenic
TAATTCTGGTATTCTCGCCT+TGG 0.441508 1.4:+88045005 MS.gene90805:CDS
TAGCAACAGGCCGGTATTCA+GGG 0.446393 1.4:-88044903 None:intergenic
TCTGCAATGCTTGCGGCGTT+CGG 0.448102 1.4:+88044860 MS.gene90805:CDS
GCGCCTCTTCTTGCTGCTCC+AGG 0.448261 1.4:+88044742 MS.gene90805:CDS
TGGGTGAACTTATGCTTTCA+GGG 0.452416 1.4:-88044582 None:intergenic
CAATGGAGGTCAGGGCCAGA+GGG 0.460506 1.4:+88044826 MS.gene90805:CDS
TGACCTCCATTGTGGTGTCT+TGG 0.470363 1.4:-88044815 None:intergenic
TGCGGCGTTCGGTACAAGTC+AGG 0.475560 1.4:+88044871 MS.gene90805:CDS
AAGACACCACAATGGAGGTC+AGG 0.476853 1.4:+88044817 MS.gene90805:CDS
ATGACATTCTTTCATTGGAA+TGG 0.478423 1.4:+88044461 MS.gene90805:CDS
ACCAAAGTATTATGATCTCC+TGG 0.478922 1.4:-88044760 None:intergenic
GGACTCTAGAGAAGAGGAAG+TGG 0.484892 1.4:-88044698 None:intergenic
GCCGACTTTGCCCTGAATAC+CGG 0.496140 1.4:+88044893 MS.gene90805:CDS
GGTTGCAAGACGTGTACGCT+TGG 0.509630 1.4:-88044638 None:intergenic
ACAATGGAGGTCAGGGCCAG+AGG 0.512229 1.4:+88044825 MS.gene90805:CDS
GCTCAACTTCTTTCAATGTG+AGG 0.512743 1.4:-88044519 None:intergenic
TCCAGGAGATCATAATACTT+TGG 0.514433 1.4:+88044759 MS.gene90805:CDS
GAAGATCCGGAGAAAATGTT+GGG 0.515937 1.4:-88044927 None:intergenic
TGAGTTGCATGGTTGAATGA+TGG 0.525185 1.4:-88044669 None:intergenic
TGTGAGTTAGAGTGAAGATC+CGG 0.525870 1.4:-88044940 None:intergenic
TGAAGATCCGGAGAAAATGT+TGG 0.538158 1.4:-88044928 None:intergenic
GAGTTGCATGGTTGAATGAT+GGG 0.547753 1.4:-88044668 None:intergenic
TCCTTGTTCACTGACGATGA+TGG 0.555427 1.4:-88044547 None:intergenic
CTCCCTTCACACGTATTCCA+AGG 0.557994 1.4:-88045022 None:intergenic
ACCATCATCGTCAGTGAACA+AGG 0.562264 1.4:+88044546 MS.gene90805:CDS
CTTCTTGGACTCTAGAGAAG+AGG 0.565275 1.4:-88044704 None:intergenic
GACTCTAGAGAAGAGGAAGT+GGG 0.570792 1.4:-88044697 None:intergenic
TCGCCTTGGAATACGTGTGA+AGG 0.571882 1.4:+88045019 MS.gene90805:CDS
TCTGGCCCTGACCTCCATTG+TGG 0.574213 1.4:-88044823 None:intergenic
GCCGGTATTCAGGGCAAAGT+CGG 0.582975 1.4:-88044894 None:intergenic
GGAATGGCAGTCCAATATTG+TGG 0.609734 1.4:+88044477 MS.gene90805:CDS
AGACACCACAATGGAGGTCA+GGG 0.625833 1.4:+88044818 MS.gene90805:CDS
ATGTTGGGCTAGCAACAGGC+CGG 0.635385 1.4:-88044912 None:intergenic
TCTCCTGGAGCAGCAAGAAG+AGG 0.648108 1.4:-88044745 None:intergenic
AAAACACTCTGCAATGCTTG+CGG 0.650171 1.4:+88044853 MS.gene90805:CDS
AGTTGCATGGTTGAATGATG+GGG 0.654848 1.4:-88044667 None:intergenic
AATGGAGGTCAGGGCCAGAG+GGG 0.656879 1.4:+88044827 MS.gene90805:CDS
CGACCAAGACACCACAATGG+AGG 0.657049 1.4:+88044812 MS.gene90805:CDS
AATGAGAGTGATGAGACGCA+AGG 0.663400 1.4:+88044978 MS.gene90805:CDS
AGTGGGAGAAATGAGTTGCA+TGG 0.665035 1.4:-88044680 None:intergenic
AGGCGACCAAGACACCACAA+TGG 0.710774 1.4:+88044809 MS.gene90805:CDS
GAAGAAATGCATGCATTGTG+AGG 0.712899 1.4:+88044789 MS.gene90805:CDS
GTTGCATGGTTGAATGATGG+GGG 0.728694 1.4:-88044666 None:intergenic
GGAGCGTGTACGTCTCACTG+TGG 0.764287 1.4:-88044617 None:intergenic
ATCATCGTCAGTGAACAAGG+AGG 0.776115 1.4:+88044549 MS.gene90805:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCAATTACTATTAAAATGA+AGG + chr1.4:88044022-88044041 MS.gene90805:intron 15.0%
!! TCAATTACTATTAAAATGAA+GGG + chr1.4:88044023-88044042 MS.gene90805:intron 15.0%
!! TCAGGAAAAAAAAAAAAAAA+AGG - chr1.4:88043734-88043753 None:intergenic 15.0%
!!! TGATGATATTTATTGATTTA+CGG - chr1.4:88044253-88044272 None:intergenic 15.0%
!!! TTCATTTTAATAGTAATTGA+TGG - chr1.4:88044023-88044042 None:intergenic 15.0%
!! AATCAAAATTAGGGTTTAAT+TGG - chr1.4:88043803-88043822 None:intergenic 20.0%
!! ATTCCCAAAAATCAAAATTA+GGG - chr1.4:88043812-88043831 None:intergenic 20.0%
!! TAACTCTAAATAGTTATTCT+TGG + chr1.4:88044059-88044078 MS.gene90805:intron 20.0%
!! TATTAAAACTAACAAAGCTT+AGG - chr1.4:88044401-88044420 None:intergenic 20.0%
!! TCACGATAATTGAATATATT+AGG + chr1.4:88043585-88043604 MS.gene90805:intron 20.0%
!!! AAACCCTAATTTTGATTTTT+GGG + chr1.4:88043806-88043825 MS.gene90805:intron 20.0%
!!! CTACAAAGATTTTTTGTAAA+TGG - chr1.4:88044117-88044136 None:intergenic 20.0%
!!! GATTTTTACGTTTTCAATAT+AGG + chr1.4:88043696-88043715 MS.gene90805:intron 20.0%
!!! TAAACCCTAATTTTGATTTT+TGG + chr1.4:88043805-88043824 MS.gene90805:intron 20.0%
! ATTTCCCTGTAATAATAACA+AGG - chr1.4:88044443-88044462 None:intergenic 25.0%
! CAAGAAGAAAAAGAAAACAA+AGG + chr1.4:88044720-88044739 MS.gene90805:CDS 25.0%
! CATTCCCAAAAATCAAAATT+AGG - chr1.4:88043813-88043832 None:intergenic 25.0%
! TACAAAGACGATTGAAAAAT+TGG + chr1.4:88043941-88043960 MS.gene90805:intron 25.0%
!!! ATCAACCTTGTTATTATTAC+AGG + chr1.4:88044435-88044454 MS.gene90805:intron 25.0%
!!! ATTTGTTAAGCCTAGTTTTA+TGG - chr1.4:88044362-88044381 None:intergenic 25.0%
!!! CTTTGTTTTCTTTTTCTTCT+TGG - chr1.4:88044722-88044741 None:intergenic 25.0%
!!! TCAACCTTGTTATTATTACA+GGG + chr1.4:88044436-88044455 MS.gene90805:intron 25.0%
AAAAGAATCGTCCACAATAT+TGG - chr1.4:88044491-88044510 None:intergenic 30.0%
AGAAATATCATTACTGTCCA+AGG + chr1.4:88043853-88043872 MS.gene90805:intron 30.0%
ATACACAAGATCAAAGATGA+AGG + chr1.4:88043965-88043984 MS.gene90805:intron 30.0%
ATGACATTCTTTCATTGGAA+TGG + chr1.4:88044461-88044480 MS.gene90805:CDS 30.0%
CTTCTAGTATAATTCAACGA+TGG - chr1.4:88044156-88044175 None:intergenic 30.0%
GAATCAATAAATCGCATCAT+GGG - chr1.4:88044289-88044308 None:intergenic 30.0%
GTAATGATATTTCTTCTCTG+TGG - chr1.4:88043847-88043866 None:intergenic 30.0%
TAAAATGAAGGGACATGATT+TGG + chr1.4:88044034-88044053 MS.gene90805:intron 30.0%
TATTTGTGCACCATAAAACT+AGG + chr1.4:88044349-88044368 MS.gene90805:intron 30.0%
TGAATCAATAAATCGCATCA+TGG - chr1.4:88044290-88044309 None:intergenic 30.0%
! GGTAAATACTTCTAAGAGAA+GGG - chr1.4:88044096-88044115 None:intergenic 30.0%
! TGGTAAATACTTCTAAGAGA+AGG - chr1.4:88044097-88044116 None:intergenic 30.0%
!! GATGCGATTTATTGATTCAA+TGG + chr1.4:88044291-88044310 MS.gene90805:intron 30.0%
AGACGCAAGGATAATAATTC+TGG + chr1.4:88044991-88045010 MS.gene90805:CDS 35.0%
GGGAAATGACATTCTTTCAT+TGG + chr1.4:88044456-88044475 MS.gene90805:intron 35.0%
TCCAGGAGATCATAATACTT+TGG + chr1.4:88044759-88044778 MS.gene90805:CDS 35.0%
! ACCAAAGTATTATGATCTCC+TGG - chr1.4:88044763-88044782 None:intergenic 35.0%
! ACTGTGGTATTTTCACAAGT+GGG - chr1.4:88044604-88044623 None:intergenic 35.0%
! TCTTGATGCAGCTTTTGTAA+TGG - chr1.4:88043773-88043792 None:intergenic 35.0%
!! GAGTTTCAGGTTTGTATCAA+TGG - chr1.4:88043552-88043571 None:intergenic 35.0%
!!! TTTTGTCCTCTTTAGAACCT+TGG - chr1.4:88043873-88043892 None:intergenic 35.0%
AAAACACTCTGCAATGCTTG+CGG + chr1.4:88044853-88044872 MS.gene90805:CDS 40.0%
AAGAAGACAAGAGTAGTAGC+AGG - chr1.4:88043637-88043656 None:intergenic 40.0%
AGTTGCATGGTTGAATGATG+GGG - chr1.4:88044670-88044689 None:intergenic 40.0%
GAAGAAATGCATGCATTGTG+AGG + chr1.4:88044789-88044808 MS.gene90805:CDS 40.0%
GAAGATCCGGAGAAAATGTT+GGG - chr1.4:88044930-88044949 None:intergenic 40.0%
GAGTTGCATGGTTGAATGAT+GGG - chr1.4:88044671-88044690 None:intergenic 40.0%
GCTCAACTTCTTTCAATGTG+AGG - chr1.4:88044522-88044541 None:intergenic 40.0%
GTCTCATCACTCTCATTTCA+AGG - chr1.4:88044975-88044994 None:intergenic 40.0%
TAATTCTGGTATTCTCGCCT+TGG + chr1.4:88045005-88045024 MS.gene90805:CDS 40.0%
TGAAGATCCGGAGAAAATGT+TGG - chr1.4:88044931-88044950 None:intergenic 40.0%
TGAGTTGCATGGTTGAATGA+TGG - chr1.4:88044672-88044691 None:intergenic 40.0%
TGGGTGAACTTATGCTTTCA+GGG - chr1.4:88044585-88044604 None:intergenic 40.0%
TGTGAGTTAGAGTGAAGATC+CGG - chr1.4:88044943-88044962 None:intergenic 40.0%
! CACTGTGGTATTTTCACAAG+TGG - chr1.4:88044605-88044624 None:intergenic 40.0%
!! CAAGCATTGCAGAGTGTTTT+CGG - chr1.4:88044853-88044872 None:intergenic 40.0%
!! TACTGTCCAAGGTTCTAAAG+AGG + chr1.4:88043864-88043883 MS.gene90805:intron 40.0%
!! TTCTTTGAAGCACGAGTTTC+AGG - chr1.4:88043565-88043584 None:intergenic 40.0%
AATGAGAGTGATGAGACGCA+AGG + chr1.4:88044978-88044997 MS.gene90805:CDS 45.0%
ACCATCATCGTCAGTGAACA+AGG + chr1.4:88044546-88044565 MS.gene90805:CDS 45.0%
AGTGGGAGAAATGAGTTGCA+TGG - chr1.4:88044683-88044702 None:intergenic 45.0%
ATCATCGTCAGTGAACAAGG+AGG + chr1.4:88044549-88044568 MS.gene90805:CDS 45.0%
GATGAAAAATCACACACGCG+CGG - chr1.4:88044231-88044250 None:intergenic 45.0%
GGAATGGCAGTCCAATATTG+TGG + chr1.4:88044477-88044496 MS.gene90805:CDS 45.0%
GGCAGACAACACAAGATATC+AGG - chr1.4:88043752-88043771 None:intergenic 45.0%
GTGGGTGAACTTATGCTTTC+AGG - chr1.4:88044586-88044605 None:intergenic 45.0%
GTTGCATGGTTGAATGATGG+GGG - chr1.4:88044669-88044688 None:intergenic 45.0%
TCCTTGTTCACTGACGATGA+TGG - chr1.4:88044550-88044569 None:intergenic 45.0%
! CTTCTTGGACTCTAGAGAAG+AGG - chr1.4:88044707-88044726 None:intergenic 45.0%
! GACTCTAGAGAAGAGGAAGT+GGG - chr1.4:88044700-88044719 None:intergenic 45.0%
! TGCTAGCCCAACATTTTCTC+CGG + chr1.4:88044921-88044940 MS.gene90805:CDS 45.0%
!! GAAAATGTTGGGCTAGCAAC+AGG - chr1.4:88044919-88044938 None:intergenic 45.0%
AAGACACCACAATGGAGGTC+AGG + chr1.4:88044817-88044836 MS.gene90805:CDS 50.0%
AGACACCACAATGGAGGTCA+GGG + chr1.4:88044818-88044837 MS.gene90805:CDS 50.0%
TAGCAACAGGCCGGTATTCA+GGG - chr1.4:88044906-88044925 None:intergenic 50.0%
TGACCTCCATTGTGGTGTCT+TGG - chr1.4:88044818-88044837 None:intergenic 50.0%
! GGACTCTAGAGAAGAGGAAG+TGG - chr1.4:88044701-88044720 None:intergenic 50.0%
AGGCGACCAAGACACCACAA+TGG + chr1.4:88044809-88044828 MS.gene90805:CDS 55.0%
CGACCAAGACACCACAATGG+AGG + chr1.4:88044812-88044831 MS.gene90805:CDS 55.0%
CTAGCAACAGGCCGGTATTC+AGG - chr1.4:88044907-88044926 None:intergenic 55.0%
GCCGGTATTCAGGGCAAAGT+CGG - chr1.4:88044897-88044916 None:intergenic 55.0%
GGTTGCAAGACGTGTACGCT+TGG - chr1.4:88044641-88044660 None:intergenic 55.0%
TCTCCTGGAGCAGCAAGAAG+AGG - chr1.4:88044748-88044767 None:intergenic 55.0%
TCTGCAATGCTTGCGGCGTT+CGG + chr1.4:88044860-88044879 MS.gene90805:CDS 55.0%
! GCCGACTTTGCCCTGAATAC+CGG + chr1.4:88044893-88044912 MS.gene90805:CDS 55.0%
! GGTTGAATGATGGGGGCTGA+AGG - chr1.4:88044662-88044681 None:intergenic 55.0%
!! ATGTTGGGCTAGCAACAGGC+CGG - chr1.4:88044915-88044934 None:intergenic 55.0%
AATGGAGGTCAGGGCCAGAG+GGG + chr1.4:88044827-88044846 MS.gene90805:CDS 60.0%
ACAATGGAGGTCAGGGCCAG+AGG + chr1.4:88044825-88044844 MS.gene90805:CDS 60.0%
CAATGGAGGTCAGGGCCAGA+GGG + chr1.4:88044826-88044845 MS.gene90805:CDS 60.0%
GGAGCGTGTACGTCTCACTG+TGG - chr1.4:88044620-88044639 None:intergenic 60.0%
TCTGGCCCTGACCTCCATTG+TGG - chr1.4:88044826-88044845 None:intergenic 60.0%
TGCGGCGTTCGGTACAAGTC+AGG + chr1.4:88044871-88044890 MS.gene90805:CDS 60.0%
!! CAGAGTGTTTTCGGCCCCTC+TGG - chr1.4:88044844-88044863 None:intergenic 60.0%
GCGCCTCTTCTTGCTGCTCC+AGG + chr1.4:88044742-88044761 MS.gene90805:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 88043545 88045038 88043545 ID=MS.gene90805
chr1.4 mRNA 88043545 88045038 88043545 ID=MS.gene90805.t1;Parent=MS.gene90805
chr1.4 exon 88043545 88043571 88043545 ID=MS.gene90805.t1.exon1;Parent=MS.gene90805.t1
chr1.4 CDS 88043545 88043571 88043545 ID=cds.MS.gene90805.t1;Parent=MS.gene90805.t1
chr1.4 exon 88044457 88045038 88044457 ID=MS.gene90805.t1.exon2;Parent=MS.gene90805.t1
chr1.4 CDS 88044457 88045038 88044457 ID=cds.MS.gene90805.t1;Parent=MS.gene90805.t1
Gene Sequence

>MS.gene90805

ATGGCCATTGATACAAACCTGAAACTCGTGCTTCAAAGAATCACGATAATTGAATATATTAGGAGATTAAGAGACTTTAGCAATATGAACCTGCTACTACTCTTGTCTTCTTATCATGAAAAACAAAAATTAATATCTAACAATAGCTACTGATTTTTACGTTTTCAATATAGGAACACGCTGAAGCCTTTTTTTTTTTTTTTTCCTGATATCTTGTGTTGTCTGCCATTACAAAAGCTGCATCAAGATTGTGCACCAATTAAACCCTAATTTTGATTTTTGGGAATGAAAAAAAAAAACCACAGAGAAGAAATATCATTACTGTCCAAGGTTCTAAAGAGGACAAAATTGAATTTCAAAAACTGAAAATCAAAAGTGTTAGAGAAAGAGTGTGTGTACAAAGACGATTGAAAAATTGGAATACACAAGATCAAAGATGAAGGAACACACTAATAATTATTATAATTAATCATAGCCATCAATTACTATTAAAATGAAGGGACATGATTTGGAATAACTCTAAATAGTTATTCTTGGAGTCAATGAATCCCTTCTCTTAGAAGTATTTACCATTTACAAAAAATCTTTGTAGTGAATATTAGTTATATCCATCGTTGAATTATACTAGAAGTCGTAATAACAAATTTTGTTTAATATGCACAAGTAAAATAGTCTTACATCATCCGCGCGTGTGTGATTTTTCATCCGTAAATCAATAAATATCATCATATCTTAGTTGATCCCATGATGCGATTTATTGATTCAATGGTCAAAAATAAGTTGTGTTTGATGCAAAACTTATCTTATTTGTGCACCATAAAACTAGGCTTAACAAATAGTATGAAAATCTGAGCCTAAGCTTTGTTAGTTTTAATAAAAGTGTGATTTTGATCAACCTTGTTATTATTACAGGGAAATGACATTCTTTCATTGGAATGGCAGTCCAATATTGTGGACGATTCTTTTGATGAGAGCCTCACATTGAAAGAAGTTGAGCAACAACCATCATCGTCAGTGAACAAGGAGGATTTTGTACTCCCTGAAAGCATAAGTTCACCCACTTGTGAAAATACCACAGTGAGACGTACACGCTCCAAGCGTACACGTCTTGCAACCTTCAGCCCCCATCATTCAACCATGCAACTCATTTCTCCCACTTCCTCTTCTCTAGAGTCCAAGAAGAAAAAGAAAACAAAGGCGCCTCTTCTTGCTGCTCCAGGAGATCATAATACTTTGGTACTTGTGAAGAAATGCATGCATTGTGAGGCGACCAAGACACCACAATGGAGGTCAGGGCCAGAGGGGCCGAAAACACTCTGCAATGCTTGCGGCGTTCGGTACAAGTCAGGCCGACTTTGCCCTGAATACCGGCCTGTTGCTAGCCCAACATTTTCTCCGGATCTTCACTCTAACTCACATAAGAAGATCCTTGAAATGAGAGTGATGAGACGCAAGGATAATAATTCTGGTATTCTCGCCTTGGAATACGTGTGA
Protein sequence

>MS.gene90805.t1

MAIDTNLKLGNDILSLEWQSNIVDDSFDESLTLKEVEQQPSSSVNKEDFVLPESISSPTCENTTVRRTRSKRTRLATFSPHHSTMQLISPTSSSLESKKKKKTKAPLLAAPGDHNTLVLVKKCMHCEATKTPQWRSGPEGPKTLCNACGVRYKSGRLCPEYRPVASPTFSPDLHSNSHKKILEMRVMRRKDNNSGILALEYV