Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90849.t1 | KHN11326.1 | 69.5 | 177 | 48 | 3 | 246 | 417 | 1 | 176 | 7.20E-57 | 231.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90849.t1 | Q9SY66 | 41.4 | 99 | 49 | 2 | 328 | 417 | 30 | 128 | 1.4e-13 | 79.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90849.t1 | A0A0B2RR75 | 69.3 | 176 | 48 | 3 | 247 | 417 | 4 | 178 | 1.5e-56 | 229.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene90849.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90849.t1 | MTR_1g115435 | 66.082 | 171 | 20 | 3 | 87 | 222 | 18 | 185 | 2.24e-70 | 221 |
MS.gene90849.t1 | MTR_4g035820 | 58.333 | 168 | 53 | 5 | 251 | 417 | 1 | 152 | 3.07e-52 | 186 |
MS.gene90849.t1 | MTR_1g035390 | 88.372 | 86 | 3 | 1 | 1 | 86 | 1 | 79 | 4.05e-42 | 144 |
MS.gene90849.t1 | MTR_4g122150 | 87.209 | 86 | 4 | 1 | 1 | 86 | 1 | 79 | 1.24e-41 | 142 |
MS.gene90849.t1 | MTR_6g074120 | 85.714 | 77 | 4 | 1 | 1 | 77 | 1 | 70 | 3.46e-35 | 125 |
MS.gene90849.t1 | MTR_0003s0080 | 84.416 | 77 | 5 | 1 | 1 | 77 | 57 | 126 | 2.03e-34 | 125 |
MS.gene90849.t1 | MTR_7g068540 | 84.932 | 73 | 4 | 1 | 14 | 86 | 1 | 66 | 3.58e-31 | 114 |
MS.gene90849.t1 | MTR_1g115440 | 36.364 | 198 | 59 | 7 | 88 | 222 | 23 | 216 | 2.57e-21 | 92.8 |
MS.gene90849.t1 | MTR_0150s0010 | 34.715 | 193 | 67 | 5 | 89 | 222 | 23 | 215 | 7.32e-20 | 88.6 |
MS.gene90849.t1 | MTR_8g445860 | 36.649 | 191 | 63 | 6 | 89 | 222 | 26 | 215 | 1.06e-19 | 88.2 |
MS.gene90849.t1 | MTR_8g044880 | 51.429 | 105 | 31 | 6 | 132 | 222 | 155 | 253 | 1.20e-19 | 89.0 |
MS.gene90849.t1 | MTR_8g445910 | 49.485 | 97 | 29 | 6 | 132 | 214 | 155 | 245 | 1.26e-15 | 77.0 |
MS.gene90849.t1 | MTR_1g115470 | 44.545 | 110 | 42 | 6 | 128 | 222 | 178 | 283 | 2.93e-15 | 77.8 |
MS.gene90849.t1 | MTR_8g445870 | 44.186 | 86 | 15 | 2 | 87 | 140 | 18 | 102 | 2.76e-12 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90849.t1 | AT1G10240 | 44.048 | 84 | 44 | 1 | 337 | 417 | 45 | 128 | 1.42e-18 | 88.6 |
MS.gene90849.t1 | AT1G10240 | 44.048 | 84 | 44 | 1 | 337 | 417 | 45 | 128 | 1.42e-18 | 88.6 |
MS.gene90849.t1 | AT5G28530 | 43.210 | 81 | 45 | 1 | 338 | 417 | 53 | 133 | 2.03e-13 | 72.8 |
MS.gene90849.t1 | AT5G28530 | 43.210 | 81 | 45 | 1 | 338 | 417 | 53 | 133 | 2.04e-13 | 72.8 |
MS.gene90849.t1 | AT5G28530 | 43.210 | 81 | 45 | 1 | 338 | 417 | 53 | 133 | 2.04e-13 | 72.8 |
MS.gene90849.t1 | AT5G28530 | 43.210 | 81 | 45 | 1 | 338 | 417 | 53 | 133 | 2.24e-13 | 72.4 |
MS.gene90849.t1 | AT5G28530 | 43.210 | 81 | 45 | 1 | 338 | 417 | 53 | 133 | 2.29e-13 | 72.4 |
Find 55 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAGAAGTTACTTTAGAAAA+TGG | 0.196031 | 1.4:-87597354 | MS.gene90849:CDS |
TTCATCTTCTTCAGTTTGTT+TGG | 0.228699 | 1.4:+87601678 | None:intergenic |
CTTCTTCAGTTTGTTTGGAT+TGG | 0.260942 | 1.4:+87601683 | None:intergenic |
AACATGTTTCACTTGTCTTT+TGG | 0.271381 | 1.4:-87600841 | MS.gene90849:CDS |
TTTGGGCTACATTGTTTGTT+TGG | 0.301936 | 1.4:-87600059 | MS.gene90849:CDS |
AAATGTAACTTTCATGTTGA+TGG | 0.305292 | 1.4:-87600521 | MS.gene90849:CDS |
AACTTCAATATCAAACAAAT+TGG | 0.327921 | 1.4:-87600445 | MS.gene90849:CDS |
GGTAGATTCATCAAACAAAA+TGG | 0.329127 | 1.4:-87597069 | MS.gene90849:CDS |
CTTGTTTCTCTACGATTCAT+AGG | 0.376530 | 1.4:+87600565 | None:intergenic |
CGAGAAATTGTGGTTGAGTT+TGG | 0.379695 | 1.4:-87600415 | MS.gene90849:CDS |
CATCATAAGGGCATCCATTT+GGG | 0.380071 | 1.4:+87600641 | None:intergenic |
TGTCAAAATCATAAGAATCT+TGG | 0.381564 | 1.4:+87601821 | None:intergenic |
TCACATGATGTAACATCATA+AGG | 0.381883 | 1.4:+87600628 | None:intergenic |
CAACAACGTCAACGTGCATT+TGG | 0.382445 | 1.4:-87600791 | MS.gene90849:CDS |
ACATCATAAGGGCATCCATT+TGG | 0.388689 | 1.4:+87600640 | None:intergenic |
CCCAGTCCAAGACACTTGTT+TGG | 0.397137 | 1.4:-87600014 | MS.gene90849:CDS |
ATCTCAACATCTTGACTAGA+AGG | 0.417447 | 1.4:+87597231 | None:intergenic |
TCTAAAGTAACTTCTTCTAC+TGG | 0.417760 | 1.4:+87597360 | None:intergenic |
AGTCAAGATGTTGAGATGAA+TGG | 0.418700 | 1.4:-87597225 | MS.gene90849:CDS |
CTCTGATGCAACACTATCAT+AGG | 0.423087 | 1.4:+87601774 | None:intergenic |
CATGTTTAAGAGAGAGTCTA+TGG | 0.428749 | 1.4:+87600858 | None:intergenic |
GTGTTAGAAATTGATGAAAT+CGG | 0.428988 | 1.4:-87597279 | MS.gene90849:CDS |
GTCAAGATGTTGAGATGAAT+GGG | 0.435675 | 1.4:-87597224 | MS.gene90849:CDS |
TAGAACCTCTTTGAAAATCA+TGG | 0.444579 | 1.4:-87597007 | MS.gene90849:CDS |
AATAATTGAAATTGCTGAGA+TGG | 0.446939 | 1.4:+87600480 | None:intergenic |
AGGAAAATTTGACCAACAAA+AGG | 0.448625 | 1.4:+87597159 | None:intergenic |
TCAAAGAGGTTCTACCTTCA+CGG | 0.449952 | 1.4:+87597016 | None:intergenic |
CGAATGCTTCTTCCTCACTT+AGG | 0.474844 | 1.4:+87597139 | None:intergenic |
CCCAAACAAGTGTCTTGGAC+TGG | 0.487799 | 1.4:+87600013 | None:intergenic |
TGCACGTCAACATGGATTCT+CGG | 0.489863 | 1.4:-87597100 | MS.gene90849:CDS |
CCAAACAAGTGTCTTGGACT+GGG | 0.490229 | 1.4:+87600014 | None:intergenic |
ACTGAAGAAGATGAAGTTCA+AGG | 0.494104 | 1.4:-87601670 | MS.gene90849:CDS |
CACATGATGTAACATCATAA+GGG | 0.496597 | 1.4:+87600629 | None:intergenic |
AGTTCAAGAAGTTGCTGCTA+TGG | 0.501024 | 1.4:-87601749 | MS.gene90849:CDS |
TGACATTACAATGGAGGTAG+TGG | 0.503770 | 1.4:-87601803 | MS.gene90849:CDS |
ACTTACCCAAACAAGTGTCT+TGG | 0.505915 | 1.4:+87600008 | None:intergenic |
AACGTCAACGTGCATTTGGC+AGG | 0.509314 | 1.4:-87600787 | MS.gene90849:intron |
CCAGTCCAAGACACTTGTTT+GGG | 0.513934 | 1.4:-87600013 | MS.gene90849:intron |
TTGCTGTATACGTGCCCAAA+TGG | 0.518565 | 1.4:-87600655 | MS.gene90849:CDS |
CATGGATTCTCGGTTCGAAA+AGG | 0.524434 | 1.4:-87597090 | MS.gene90849:CDS |
CTATGATAGTGTTGCATCAG+AGG | 0.534785 | 1.4:-87601773 | MS.gene90849:CDS |
CATGTGATAACGAACCCCTC+TGG | 0.556560 | 1.4:-87600612 | MS.gene90849:CDS |
GGTTGAGTTTGGTATGAATG+AGG | 0.569145 | 1.4:-87600404 | MS.gene90849:intron |
ATAATTGAAATTGCTGAGAT+GGG | 0.570838 | 1.4:+87600481 | None:intergenic |
AGAAGAAAGTGACGAAGACA+TGG | 0.570974 | 1.4:-87597196 | MS.gene90849:CDS |
TGGTGCCTTGCGAGAAATTG+TGG | 0.574264 | 1.4:-87600425 | MS.gene90849:CDS |
CTCAACCACAATTTCTCGCA+AGG | 0.589371 | 1.4:+87600420 | None:intergenic |
AACAAAATGGAATTGTGAGT+AGG | 0.593662 | 1.4:-87597056 | MS.gene90849:CDS |
AAGAGGTATGCACGTCAACA+TGG | 0.594612 | 1.4:-87597108 | MS.gene90849:CDS |
CAAACAAGTGTCTTGGACTG+GGG | 0.599155 | 1.4:+87600015 | None:intergenic |
GCAAACATCGACAACACCAG+AGG | 0.599982 | 1.4:+87600596 | None:intergenic |
CAAACATCGACAACACCAGA+GGG | 0.606026 | 1.4:+87600597 | None:intergenic |
ATGAATCGTAGAGAAACAAG+TGG | 0.682053 | 1.4:-87600562 | MS.gene90849:CDS |
AAAGAAATAGAGAATCAACA+AGG | 0.743349 | 1.4:-87596969 | MS.gene90849:CDS |
AAACATCGACAACACCAGAG+GGG | 0.783302 | 1.4:+87600598 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATTAAAACTTACTATTTA+TGG | + | chr1.4:87600317-87600336 | None:intergenic | 10.0% |
!!! | AATTTTTAATTCATTTAGTA+TGG | + | chr1.4:87598449-87598468 | None:intergenic | 10.0% |
!! | GAAAAAAATTAAAGTTGTAT+TGG | - | chr1.4:87597402-87597421 | MS.gene90849:CDS | 15.0% |
!! | GAAATTAAATATACAAAGTT+TGG | + | chr1.4:87601209-87601228 | None:intergenic | 15.0% |
!! | TTAATTTCTTCAATGTATTA+TGG | - | chr1.4:87601221-87601240 | MS.gene90849:intron | 15.0% |
!! | TTTCATGCAAAAATAATATT+AGG | + | chr1.4:87598413-87598432 | None:intergenic | 15.0% |
!!! | ATTTCTAAAATATAACTAGT+AGG | + | chr1.4:87601114-87601133 | None:intergenic | 15.0% |
!!! | TACTAGTTATATTTTAGAAA+TGG | - | chr1.4:87601113-87601132 | MS.gene90849:intron | 15.0% |
!!! | TTTTTTAACAAGCTAAAATA+CGG | + | chr1.4:87598938-87598957 | None:intergenic | 15.0% |
!! | AACTTCAATATCAAACAAAT+TGG | - | chr1.4:87598332-87598351 | MS.gene90849:intron | 20.0% |
!! | AGAAAAAGAATACAAAAAAG+TGG | - | chr1.4:87597181-87597200 | MS.gene90849:CDS | 20.0% |
!! | AGTATTTATTACTAACAGAT+TGG | + | chr1.4:87597688-87597707 | None:intergenic | 20.0% |
!! | ATTCTCTTTAATGCTAAATT+TGG | - | chr1.4:87598909-87598928 | MS.gene90849:intron | 20.0% |
!! | CTCATCTCATATTTATTTAT+AGG | - | chr1.4:87600794-87600813 | MS.gene90849:CDS | 20.0% |
!! | TCACATTATGTATTGAAATT+TGG | + | chr1.4:87600999-87601018 | None:intergenic | 20.0% |
!! | TTGAACAAAATATAAGTGAA+AGG | + | chr1.4:87599709-87599728 | None:intergenic | 20.0% |
!!! | AAAAATATTGTTCCTTTTGT+TGG | - | chr1.4:87601606-87601625 | MS.gene90849:CDS | 20.0% |
!!! | AAATGACACTCATTTTAAAA+CGG | - | chr1.4:87597469-87597488 | MS.gene90849:intron | 20.0% |
!!! | AATTTGCTTATAATAATGAC+CGG | - | chr1.4:87600623-87600642 | MS.gene90849:CDS | 20.0% |
!!! | TAAAGTTTTACATAAAGAAG+TGG | + | chr1.4:87600063-87600082 | None:intergenic | 20.0% |
!!! | TACGAGTAAAACTTAATTTT+GGG | + | chr1.4:87597590-87597609 | None:intergenic | 20.0% |
!!! | TTATGATTTTGACATTACAA+TGG | - | chr1.4:87596965-87596984 | MS.gene90849:CDS | 20.0% |
! | AAAGAAATAGAGAATCAACA+AGG | - | chr1.4:87601808-87601827 | MS.gene90849:CDS | 25.0% |
! | AAATGTAACTTTCATGTTGA+TGG | - | chr1.4:87598256-87598275 | MS.gene90849:intron | 25.0% |
! | AAATTGTATGAGAGAAAAGT+TGG | - | chr1.4:87597353-87597372 | MS.gene90849:CDS | 25.0% |
! | AACAAACAAGTACAAATAGT+GGG | + | chr1.4:87598800-87598819 | None:intergenic | 25.0% |
! | AATAATTGAAATTGCTGAGA+TGG | + | chr1.4:87598300-87598319 | None:intergenic | 25.0% |
! | ACACACTAATTGATAAAAGA+AGG | + | chr1.4:87598555-87598574 | None:intergenic | 25.0% |
! | AGAGAACATAATTCTAATTG+AGG | + | chr1.4:87598058-87598077 | None:intergenic | 25.0% |
! | ATAATTGAAATTGCTGAGAT+GGG | + | chr1.4:87598299-87598318 | None:intergenic | 25.0% |
! | ATTACTAACAGATTGGAAAT+TGG | + | chr1.4:87597681-87597700 | None:intergenic | 25.0% |
! | CACATTAAATGAAAGAGTTA+AGG | + | chr1.4:87600128-87600147 | None:intergenic | 25.0% |
! | CATTCAATAAATGATGTATG+TGG | - | chr1.4:87600549-87600568 | MS.gene90849:CDS | 25.0% |
! | GGTTGCAATTAAATTAAACA+GGG | + | chr1.4:87597748-87597767 | None:intergenic | 25.0% |
! | GTATTTATTGAAGGTAAAGT+TGG | - | chr1.4:87597377-87597396 | MS.gene90849:CDS | 25.0% |
! | GTGTTAGAAATTGATGAAAT+CGG | - | chr1.4:87601498-87601517 | MS.gene90849:intron | 25.0% |
! | GTTAGAAGTTCTATATTGTT+TGG | + | chr1.4:87599743-87599762 | None:intergenic | 25.0% |
! | GTTGCAATTAAATTAAACAG+GGG | + | chr1.4:87597747-87597766 | None:intergenic | 25.0% |
! | TAACAAACAAGTACAAATAG+TGG | + | chr1.4:87598801-87598820 | None:intergenic | 25.0% |
! | TATATTGTTTGGAGAATTGA+AGG | + | chr1.4:87599732-87599751 | None:intergenic | 25.0% |
! | TCACTATAAGTGTTTGTATA+TGG | + | chr1.4:87598970-87598989 | None:intergenic | 25.0% |
! | TGTCAAAATCATAAGAATCT+TGG | + | chr1.4:87596959-87596978 | None:intergenic | 25.0% |
! | TTAGTTTAGATTTAGTGTCT+CGG | - | chr1.4:87600401-87600420 | MS.gene90849:intron | 25.0% |
!! | AAAGTTGGAGTATTTATTGA+AGG | - | chr1.4:87597368-87597387 | MS.gene90849:CDS | 25.0% |
!! | AATTTGCTTATAATAGTGAC+CGG | + | chr1.4:87600514-87600533 | None:intergenic | 25.0% |
!! | CATAATTCTAATTGAGGTTT+TGG | + | chr1.4:87598052-87598071 | None:intergenic | 25.0% |
!! | CTACGAGTAAAACTTAATTT+TGG | + | chr1.4:87597591-87597610 | None:intergenic | 25.0% |
!! | CTATTTGTACTTGTTTGTTA+CGG | - | chr1.4:87598801-87598820 | MS.gene90849:intron | 25.0% |
!! | GAAGAAGTTACTTTAGAAAA+TGG | - | chr1.4:87601423-87601442 | MS.gene90849:intron | 25.0% |
!! | TCATTTTCATACTCATATTC+GGG | + | chr1.4:87597152-87597171 | None:intergenic | 25.0% |
!! | TGTGCAATTAAAATTTCTAG+AGG | - | chr1.4:87600910-87600929 | MS.gene90849:intron | 25.0% |
!! | TTTTAATGTCTACTAGTGAT+TGG | - | chr1.4:87598845-87598864 | MS.gene90849:intron | 25.0% |
!!! | AAGCATTCGTTTTTTATAAG+AGG | - | chr1.4:87601652-87601671 | MS.gene90849:CDS | 25.0% |
!!! | ACATTTTGATCTTAACATTG+TGG | - | chr1.4:87601467-87601486 | MS.gene90849:intron | 25.0% |
!!! | CTATTTCTTTGTTCTTTTGA+TGG | + | chr1.4:87601798-87601817 | None:intergenic | 25.0% |
!!! | GAAAATTTTAAGAAGCCAAA+AGG | + | chr1.4:87601022-87601041 | None:intergenic | 25.0% |
!!! | GTCATTTTCATACTCATATT+CGG | + | chr1.4:87597153-87597172 | None:intergenic | 25.0% |
!!! | TATATAAAAGTACCTGATTG+TGG | + | chr1.4:87601186-87601205 | None:intergenic | 25.0% |
!!! | TTGATGCTTTTATTTTGTGT+TGG | - | chr1.4:87597241-87597260 | MS.gene90849:CDS | 25.0% |
AAAAGTTGTATCAAAGCTGA+AGG | + | chr1.4:87599955-87599974 | None:intergenic | 30.0% | |
AACAAAATGGAATTGTGAGT+AGG | - | chr1.4:87601721-87601740 | MS.gene90849:CDS | 30.0% | |
AACATTGAATGAAAGAGTTG+AGG | + | chr1.4:87599318-87599337 | None:intergenic | 30.0% | |
ACGAGAGACTATTCTATTAT+AGG | + | chr1.4:87597787-87597806 | None:intergenic | 30.0% | |
AGACTAAATCAGGTCATAAA+GGG | + | chr1.4:87599012-87599031 | None:intergenic | 30.0% | |
AGGAAAATTTGACCAACAAA+AGG | + | chr1.4:87601621-87601640 | None:intergenic | 30.0% | |
ATACCATTGTTGGATTGTAT+GGG | - | chr1.4:87599585-87599604 | MS.gene90849:intron | 30.0% | |
ATCGTAGTACTAGTAAATAC+TGG | + | chr1.4:87597712-87597731 | None:intergenic | 30.0% | |
ATCTTGAGTTATCAATGTTG+CGG | - | chr1.4:87597637-87597656 | MS.gene90849:intron | 30.0% | |
ATGAGATGAGATTAGATGAT+TGG | + | chr1.4:87600784-87600803 | None:intergenic | 30.0% | |
CACATGATGTAACATCATAA+GGG | + | chr1.4:87598151-87598170 | None:intergenic | 30.0% | |
CGTTAATACAAATTTACCCT+TGG | - | chr1.4:87600949-87600968 | MS.gene90849:intron | 30.0% | |
CTCTCGTATTACATTCAATT+TGG | - | chr1.4:87597800-87597819 | MS.gene90849:intron | 30.0% | |
CTCTTTAATGCTAAATTTGG+TGG | - | chr1.4:87598912-87598931 | MS.gene90849:intron | 30.0% | |
GAAATTAATGGTGCATACAT+TGG | + | chr1.4:87599224-87599243 | None:intergenic | 30.0% | |
GAATCAACAATCAACACATT+AGG | - | chr1.4:87600007-87600026 | MS.gene90849:intron | 30.0% | |
GGGTTGCAATTAAATTAAAC+AGG | + | chr1.4:87597749-87597768 | None:intergenic | 30.0% | |
GGTAGATTCATCAAACAAAA+TGG | - | chr1.4:87601708-87601727 | MS.gene90849:CDS | 30.0% | |
GTATGCACCATTAATTTCAT+TGG | - | chr1.4:87599226-87599245 | MS.gene90849:intron | 30.0% | |
GTTCCAAAATAAAGTAAGTG+TGG | + | chr1.4:87600876-87600895 | None:intergenic | 30.0% | |
TAACAGATTGGAAATTGGAA+TGG | + | chr1.4:87597676-87597695 | None:intergenic | 30.0% | |
TAATTTGATACGATGGATCT+TGG | + | chr1.4:87599078-87599097 | None:intergenic | 30.0% | |
TACACCTCCAATGAAATTAA+TGG | + | chr1.4:87599236-87599255 | None:intergenic | 30.0% | |
TACTCGTAGTAGTAATTAAG+CGG | - | chr1.4:87597602-87597621 | MS.gene90849:intron | 30.0% | |
TCAACTCTTTCATTCAATGT+TGG | - | chr1.4:87599317-87599336 | MS.gene90849:intron | 30.0% | |
TCACATGATGTAACATCATA+AGG | + | chr1.4:87598152-87598171 | None:intergenic | 30.0% | |
TCGTAGTACTAGTAAATACT+GGG | + | chr1.4:87597711-87597730 | None:intergenic | 30.0% | |
TGAATGAGGTACGATTAATT+TGG | - | chr1.4:87598387-87598406 | MS.gene90849:intron | 30.0% | |
TGAGATGAGATTAGATGATT+GGG | + | chr1.4:87600783-87600802 | None:intergenic | 30.0% | |
! | AACATGTTTCACTTGTCTTT+TGG | - | chr1.4:87597936-87597955 | MS.gene90849:intron | 30.0% |
! | AATCTAATGACTTGCACTTA+AGG | + | chr1.4:87599795-87599814 | None:intergenic | 30.0% |
! | ATCTAATGACTTGCACTTAA+GGG | + | chr1.4:87599794-87599813 | None:intergenic | 30.0% |
! | CAATACATAATGTGACCTTT+TGG | - | chr1.4:87601004-87601023 | MS.gene90849:intron | 30.0% |
! | CATTTTCATACTCATATTCG+GGG | + | chr1.4:87597151-87597170 | None:intergenic | 30.0% |
! | TAGAACCTCTTTGAAAATCA+TGG | - | chr1.4:87601770-87601789 | MS.gene90849:CDS | 30.0% |
! | TCATTACAATCCCTTTTAAG+CGG | - | chr1.4:87599814-87599833 | MS.gene90849:intron | 30.0% |
! | TCTAAAGTAACTTCTTCTAC+TGG | + | chr1.4:87601420-87601439 | None:intergenic | 30.0% |
! | TCTGTTTGTCTTGTAGTTTT+GGG | - | chr1.4:87598701-87598720 | MS.gene90849:intron | 30.0% |
! | TTCATCTTCTTCAGTTTGTT+TGG | + | chr1.4:87597102-87597121 | None:intergenic | 30.0% |
!! | TGACCACACTTACTTTATTT+TGG | - | chr1.4:87600870-87600889 | MS.gene90849:CDS | 30.0% |
!! | TGATTTTGACATTACAATGG+AGG | - | chr1.4:87596968-87596987 | MS.gene90849:CDS | 30.0% |
!!! | TAAGGTTTTGGATTAAGAAG+TGG | + | chr1.4:87599667-87599686 | None:intergenic | 30.0% |
AAATGTCGTCAACCTATCTT+GGG | - | chr1.4:87600719-87600738 | MS.gene90849:intron | 35.0% | |
AATTTAGAAGATACTCCCTC+CGG | + | chr1.4:87600645-87600664 | None:intergenic | 35.0% | |
ACGTATACAGCAAAATTCCT+AGG | + | chr1.4:87598115-87598134 | None:intergenic | 35.0% | |
ACTGAAGAAGATGAAGTTCA+AGG | - | chr1.4:87597107-87597126 | MS.gene90849:CDS | 35.0% | |
AGAAAAATGTCACCCAAGAT+AGG | + | chr1.4:87600734-87600753 | None:intergenic | 35.0% | |
AGGAGAAGATATTAGACTGA+AGG | + | chr1.4:87601094-87601113 | None:intergenic | 35.0% | |
AGTCAAGATGTTGAGATGAA+TGG | - | chr1.4:87601552-87601571 | MS.gene90849:intron | 35.0% | |
ATCCAAAACCTTAAGACAAC+AGG | - | chr1.4:87599674-87599693 | MS.gene90849:intron | 35.0% | |
ATCCATCGTATCAAATTACG+CGG | - | chr1.4:87599080-87599099 | MS.gene90849:intron | 35.0% | |
ATCTCAACATCTTGACTAGA+AGG | + | chr1.4:87601549-87601568 | None:intergenic | 35.0% | |
ATGAATCGTAGAGAAACAAG+TGG | - | chr1.4:87598215-87598234 | MS.gene90849:intron | 35.0% | |
CAGACTAAATCAGGTCATAA+AGG | + | chr1.4:87599013-87599032 | None:intergenic | 35.0% | |
CATACAATCCAACAATGGTA+TGG | + | chr1.4:87599586-87599605 | None:intergenic | 35.0% | |
CATACCATTGTTGGATTGTA+TGG | - | chr1.4:87599584-87599603 | MS.gene90849:intron | 35.0% | |
CATGTTTAAGAGAGAGTCTA+TGG | + | chr1.4:87597922-87597941 | None:intergenic | 35.0% | |
CTCATAAACCTGTTGTCTTA+AGG | + | chr1.4:87599685-87599704 | None:intergenic | 35.0% | |
GAGATGAGATTAGATGATTG+GGG | + | chr1.4:87600782-87600801 | None:intergenic | 35.0% | |
GGTCATAAAGGGATTAATCT+AGG | + | chr1.4:87599001-87599020 | None:intergenic | 35.0% | |
GTAAAAGCTTCCGCTTAAAA+GGG | + | chr1.4:87599827-87599846 | None:intergenic | 35.0% | |
GTCAAGATGTTGAGATGAAT+GGG | - | chr1.4:87601553-87601572 | MS.gene90849:intron | 35.0% | |
TAAATGTCGTCAACCTATCT+TGG | - | chr1.4:87600718-87600737 | MS.gene90849:intron | 35.0% | |
TACAAACTTGCAATCTGAAG+TGG | - | chr1.4:87598595-87598614 | MS.gene90849:intron | 35.0% | |
TACCATTGTTGGATTGTATG+GGG | - | chr1.4:87599586-87599605 | MS.gene90849:intron | 35.0% | |
TGAGTGTGACTCATTAACTA+AGG | + | chr1.4:87600206-87600225 | None:intergenic | 35.0% | |
TGCACCATTAATTTCATTGG+AGG | - | chr1.4:87599229-87599248 | MS.gene90849:intron | 35.0% | |
TGCTTATAATAATGACCGGA+GGG | - | chr1.4:87600627-87600646 | MS.gene90849:CDS | 35.0% | |
TGTAAAAGCTTCCGCTTAAA+AGG | + | chr1.4:87599828-87599847 | None:intergenic | 35.0% | |
TGTGTCAAACAGAAGCTTAA+GGG | + | chr1.4:87597859-87597878 | None:intergenic | 35.0% | |
TTATCCTTTATCCCATCAAG+CGG | - | chr1.4:87599126-87599145 | MS.gene90849:intron | 35.0% | |
TTGCTTATAATAATGACCGG+AGG | - | chr1.4:87600626-87600645 | MS.gene90849:CDS | 35.0% | |
TTGTGTCAAACAGAAGCTTA+AGG | + | chr1.4:87597860-87597879 | None:intergenic | 35.0% | |
TTTGGGCTACATTGTTTGTT+TGG | - | chr1.4:87598718-87598737 | MS.gene90849:intron | 35.0% | |
! | AACCTGTTGTCTTAAGGTTT+TGG | + | chr1.4:87599679-87599698 | None:intergenic | 35.0% |
! | CTTCTTCAGTTTGTTTGGAT+TGG | + | chr1.4:87597097-87597116 | None:intergenic | 35.0% |
! | CTTGTTTCTCTACGATTCAT+AGG | + | chr1.4:87598215-87598234 | None:intergenic | 35.0% |
! | GACTTAAAAGCATGGCAATT+TGG | - | chr1.4:87598678-87598697 | MS.gene90849:intron | 35.0% |
! | GGCTTCTTAAAATTTTCCCT+CGG | - | chr1.4:87601025-87601044 | MS.gene90849:intron | 35.0% |
! | GTCTGTTTGTCTTGTAGTTT+TGG | - | chr1.4:87598700-87598719 | MS.gene90849:intron | 35.0% |
! | TGGTCAAATTTTCCTAAGTG+AGG | - | chr1.4:87601626-87601645 | MS.gene90849:CDS | 35.0% |
! | TGGTTCCATGATTTTCAAAG+AGG | + | chr1.4:87601778-87601797 | None:intergenic | 35.0% |
!! | AACTTTTGAGTCACACGTAA+GGG | - | chr1.4:87599968-87599987 | MS.gene90849:intron | 35.0% |
!! | AGCATTTGGAGTTCTAAAGT+TGG | + | chr1.4:87598081-87598100 | None:intergenic | 35.0% |
!! | GGACTTATGCTTTGAAGAAA+GGG | - | chr1.4:87597262-87597281 | MS.gene90849:CDS | 35.0% |
!! | TGGACTTATGCTTTGAAGAA+AGG | - | chr1.4:87597261-87597280 | MS.gene90849:CDS | 35.0% |
!!! | GACACTCATTTTAAAACGGA+GGG | - | chr1.4:87597473-87597492 | MS.gene90849:intron | 35.0% |
!!! | TGACACTCATTTTAAAACGG+AGG | - | chr1.4:87597472-87597491 | MS.gene90849:intron | 35.0% |
AAACTAGATTCTACTCCCTC+CGG | - | chr1.4:87600492-87600511 | MS.gene90849:CDS | 40.0% | |
AAGCACTTCACAATGTTACC+AGG | - | chr1.4:87598656-87598675 | MS.gene90849:intron | 40.0% | |
AAGTCGAACCATACCATTGT+TGG | - | chr1.4:87599575-87599594 | MS.gene90849:intron | 40.0% | |
AATGGTATGGTTCGACTTCA+TGG | + | chr1.4:87599573-87599592 | None:intergenic | 40.0% | |
AATGTTATCTTATGCCCCGA+GGG | - | chr1.4:87600819-87600838 | MS.gene90849:CDS | 40.0% | |
ACTTACCCAAACAAGTGTCT+TGG | + | chr1.4:87598772-87598791 | None:intergenic | 40.0% | |
AGAAGAAAGTGACGAAGACA+TGG | - | chr1.4:87601581-87601600 | MS.gene90849:intron | 40.0% | |
AGTTATCAATGTTGCGGCAA+GGG | - | chr1.4:87597643-87597662 | MS.gene90849:intron | 40.0% | |
AGTTCAAGAAGTTGCTGCTA+TGG | - | chr1.4:87597028-87597047 | MS.gene90849:CDS | 40.0% | |
ATAGGCACTCAAGATTCACA+GGG | + | chr1.4:87597769-87597788 | None:intergenic | 40.0% | |
ATCCCCATACAATCCAACAA+TGG | + | chr1.4:87599591-87599610 | None:intergenic | 40.0% | |
ATTATGTGGGGGAGTCAAAT+TGG | - | chr1.4:87599280-87599299 | MS.gene90849:intron | 40.0% | |
CGAGAAATTGTGGTTGAGTT+TGG | - | chr1.4:87598362-87598381 | MS.gene90849:intron | 40.0% | |
CTCAAACTCAAACCACAATC+AGG | - | chr1.4:87601171-87601190 | MS.gene90849:intron | 40.0% | |
CTCTGATGCAACACTATCAT+AGG | + | chr1.4:87597006-87597025 | None:intergenic | 40.0% | |
CTCTGCAGTTGCACAAATTT+GGG | + | chr1.4:87597553-87597572 | None:intergenic | 40.0% | |
GAGACTATGAAATCTGCCAA+GGG | + | chr1.4:87600968-87600987 | None:intergenic | 40.0% | |
GGTTGAGTTTGGTATGAATG+AGG | - | chr1.4:87598373-87598392 | MS.gene90849:intron | 40.0% | |
GTTACCAGGACTTAAAAGCA+TGG | - | chr1.4:87598670-87598689 | MS.gene90849:intron | 40.0% | |
TAATGTTATCTTATGCCCCG+AGG | - | chr1.4:87600818-87600837 | MS.gene90849:CDS | 40.0% | |
TATAGGCACTCAAGATTCAC+AGG | + | chr1.4:87597770-87597789 | None:intergenic | 40.0% | |
TCAAAGAGGTTCTACCTTCA+CGG | + | chr1.4:87601764-87601783 | None:intergenic | 40.0% | |
TCCTCCTTGTTGGATTATGT+GGG | - | chr1.4:87599267-87599286 | MS.gene90849:intron | 40.0% | |
TCTCTGCAGTTGCACAAATT+TGG | + | chr1.4:87597554-87597573 | None:intergenic | 40.0% | |
TGACATTACAATGGAGGTAG+TGG | - | chr1.4:87596974-87596993 | MS.gene90849:CDS | 40.0% | |
TGACCAGATCAGACTAAATC+AGG | + | chr1.4:87599022-87599041 | None:intergenic | 40.0% | |
TGACCTGATTTAGTCTGATC+TGG | - | chr1.4:87599016-87599035 | MS.gene90849:intron | 40.0% | |
TGCTTATAATAGTGACCGGA+GGG | + | chr1.4:87600510-87600529 | None:intergenic | 40.0% | |
TTGCTTATAATAGTGACCGG+AGG | + | chr1.4:87600511-87600530 | None:intergenic | 40.0% | |
! | CAGAAGCTTAAGGGTCATTT+TGG | + | chr1.4:87597850-87597869 | None:intergenic | 40.0% |
! | CTATGATAGTGTTGCATCAG+AGG | - | chr1.4:87597004-87597023 | MS.gene90849:CDS | 40.0% |
! | GAAGGTATATATGTGCTGGA+AGG | + | chr1.4:87601076-87601095 | None:intergenic | 40.0% |
! | GACTGAAGGTATATATGTGC+TGG | + | chr1.4:87601080-87601099 | None:intergenic | 40.0% |
! | GATTTCTTTTGTCACCGTGA+AGG | - | chr1.4:87601747-87601766 | MS.gene90849:CDS | 40.0% |
! | TGTCTTTTGGCACAGTTGTA+AGG | - | chr1.4:87597949-87597968 | MS.gene90849:intron | 40.0% |
! | TTGTGGTTTGAGTTTGAGCT+AGG | + | chr1.4:87601169-87601188 | None:intergenic | 40.0% |
!! | AAGCTTAAGGGTCATTTTGG+TGG | + | chr1.4:87597847-87597866 | None:intergenic | 40.0% |
!! | ACATCATAAGGGCATCCATT+TGG | + | chr1.4:87598140-87598159 | None:intergenic | 40.0% |
!! | ACTTTTGAGTCACACGTAAG+GGG | - | chr1.4:87599969-87599988 | MS.gene90849:intron | 40.0% |
!! | ATTGCCATGCTTTTAAGTCC+TGG | + | chr1.4:87598677-87598696 | None:intergenic | 40.0% |
!! | CAACTTTTGAGTCACACGTA+AGG | - | chr1.4:87599967-87599986 | MS.gene90849:intron | 40.0% |
!! | CATCATAAGGGCATCCATTT+GGG | + | chr1.4:87598139-87598158 | None:intergenic | 40.0% |
AAACATCGACAACACCAGAG+GGG | + | chr1.4:87598182-87598201 | None:intergenic | 45.0% | |
AATGCTGATGATCGCAACCT+AGG | - | chr1.4:87598095-87598114 | MS.gene90849:intron | 45.0% | |
AGGTTGCGATCATCAGCATT+TGG | + | chr1.4:87598095-87598114 | None:intergenic | 45.0% | |
CAAACAAGTGTCTTGGACTG+GGG | + | chr1.4:87598765-87598784 | None:intergenic | 45.0% | |
CAAACATCGACAACACCAGA+GGG | + | chr1.4:87598183-87598202 | None:intergenic | 45.0% | |
CAACAACGTCAACGTGCATT+TGG | - | chr1.4:87597986-87598005 | MS.gene90849:intron | 45.0% | |
CCAAACAAGTGTCTTGGACT+GGG | + | chr1.4:87598766-87598785 | None:intergenic | 45.0% | |
CCAGTCCAAGACACTTGTTT+GGG | - | chr1.4:87598764-87598783 | MS.gene90849:intron | 45.0% | |
CCTCCTTGTTGGATTATGTG+GGG | - | chr1.4:87599268-87599287 | MS.gene90849:intron | 45.0% | |
CGAATGCTTCTTCCTCACTT+AGG | + | chr1.4:87601641-87601660 | None:intergenic | 45.0% | |
CGAGACTATGAAATCTGCCA+AGG | + | chr1.4:87600969-87600988 | None:intergenic | 45.0% | |
CTCAACCACAATTTCTCGCA+AGG | + | chr1.4:87598360-87598379 | None:intergenic | 45.0% | |
CTCCTCCTTGTTGGATTATG+TGG | - | chr1.4:87599266-87599285 | MS.gene90849:intron | 45.0% | |
CTCCTTGTTGGATTATGTGG+GGG | - | chr1.4:87599269-87599288 | MS.gene90849:intron | 45.0% | |
GAAGACCTTCATGACAACAG+TGG | + | chr1.4:87599912-87599931 | None:intergenic | 45.0% | |
GACCGCGTAATTTGATACGA+TGG | + | chr1.4:87599085-87599104 | None:intergenic | 45.0% | |
GAGCAACCACACAAATGAGT+TGG | - | chr1.4:87600034-87600053 | MS.gene90849:CDS | 45.0% | |
GAGTTATCAATGTTGCGGCA+AGG | - | chr1.4:87597642-87597661 | MS.gene90849:intron | 45.0% | |
GTATGGTTCGACTTCATGGA+GGG | + | chr1.4:87599569-87599588 | None:intergenic | 45.0% | |
GTTGGATTGTATGGGGATCT+TGG | - | chr1.4:87599593-87599612 | MS.gene90849:intron | 45.0% | |
TAAAAGAGCCTCCGCTTGAT+GGG | + | chr1.4:87599140-87599159 | None:intergenic | 45.0% | |
TATATGTGCTGGAAGGCAAG+TGG | + | chr1.4:87601069-87601088 | None:intergenic | 45.0% | |
TATGGTTCGACTTCATGGAG+GGG | + | chr1.4:87599568-87599587 | None:intergenic | 45.0% | |
TCATGAAGGTCTTCCACATG+AGG | - | chr1.4:87599918-87599937 | MS.gene90849:intron | 45.0% | |
TGCACGTCAACATGGATTCT+CGG | - | chr1.4:87601677-87601696 | MS.gene90849:CDS | 45.0% | |
TGGTGTCCAACTCATTTGTG+TGG | + | chr1.4:87600043-87600062 | None:intergenic | 45.0% | |
TGGTGTCTTACTCACTTGTG+TGG | + | chr1.4:87599647-87599666 | None:intergenic | 45.0% | |
TTAAAAGAGCCTCCGCTTGA+TGG | + | chr1.4:87599141-87599160 | None:intergenic | 45.0% | |
TTGCTGTATACGTGCCCAAA+TGG | - | chr1.4:87598122-87598141 | MS.gene90849:intron | 45.0% | |
! | AAGAGGTATGCACGTCAACA+TGG | - | chr1.4:87601669-87601688 | MS.gene90849:CDS | 45.0% |
! | CATGGATTCTCGGTTCGAAA+AGG | - | chr1.4:87601687-87601706 | MS.gene90849:CDS | 45.0% |
! | CTTGGCGGATCATCTACATT+GGG | - | chr1.4:87599611-87599630 | MS.gene90849:intron | 45.0% |
! | CTTTGTTGTCTCCTCCTTGT+TGG | - | chr1.4:87599257-87599276 | MS.gene90849:intron | 45.0% |
! | TCTTGGCGGATCATCTACAT+TGG | - | chr1.4:87599610-87599629 | MS.gene90849:intron | 45.0% |
! | TGTTGCTTATCATGTGCCCT+CGG | + | chr1.4:87600838-87600857 | None:intergenic | 45.0% |
!!! | AAGTTTTTAATTATTTTATT+AGG | - | chr1.4:87598510-87598529 | MS.gene90849:intron | 5.0% |
AACGTCAACGTGCATTTGGC+AGG | - | chr1.4:87597990-87598009 | MS.gene90849:intron | 50.0% | |
AGGTCTTCCACATGAGGAGT+TGG | - | chr1.4:87599924-87599943 | MS.gene90849:intron | 50.0% | |
CCCAAACAAGTGTCTTGGAC+TGG | + | chr1.4:87598767-87598786 | None:intergenic | 50.0% | |
CCCAGTCCAAGACACTTGTT+TGG | - | chr1.4:87598763-87598782 | MS.gene90849:intron | 50.0% | |
CCCCACATAATCCAACAAGG+AGG | + | chr1.4:87599271-87599290 | None:intergenic | 50.0% | |
CTCCCCCACATAATCCAACA+AGG | + | chr1.4:87599274-87599293 | None:intergenic | 50.0% | |
CTCGTTGGTGCATGTGACAA+TGG | + | chr1.4:87599876-87599895 | None:intergenic | 50.0% | |
GCAAACATCGACAACACCAG+AGG | + | chr1.4:87598184-87598203 | None:intergenic | 50.0% | |
GCGGAAGAGATTCTAGGTGT+TGG | + | chr1.4:87599546-87599565 | None:intergenic | 50.0% | |
GGATTGTATGGGGATCTTGG+CGG | - | chr1.4:87599596-87599615 | MS.gene90849:intron | 50.0% | |
GGTATGGTTCGACTTCATGG+AGG | + | chr1.4:87599570-87599589 | None:intergenic | 50.0% | |
GGTTTGACCAACTCCTCATG+TGG | + | chr1.4:87599934-87599953 | None:intergenic | 50.0% | |
GTGCATTTGGCAGGTAGCTT+AGG | - | chr1.4:87597999-87598018 | MS.gene90849:intron | 50.0% | |
GTTGCTTATCATGTGCCCTC+GGG | + | chr1.4:87600837-87600856 | None:intergenic | 50.0% | |
TCCTTTATCCCATCAAGCGG+AGG | - | chr1.4:87599129-87599148 | MS.gene90849:intron | 50.0% | |
TCTGGCCACTGTTGTCATGA+AGG | - | chr1.4:87599904-87599923 | MS.gene90849:intron | 50.0% | |
TGGTGCCTTGCGAGAAATTG+TGG | - | chr1.4:87598352-87598371 | MS.gene90849:intron | 50.0% | |
TTGCTTATCATGTGCCCTCG+GGG | + | chr1.4:87600836-87600855 | None:intergenic | 50.0% | |
TTGGAGGGAAAATCTGCCGA+GGG | + | chr1.4:87601044-87601063 | None:intergenic | 50.0% | |
! | CATGTGATAACGAACCCCTC+TGG | - | chr1.4:87598165-87598184 | MS.gene90849:intron | 50.0% |
CACCAACGAGACACGTTGTC+TGG | - | chr1.4:87599886-87599905 | MS.gene90849:intron | 55.0% | |
CTTGGAGGGAAAATCTGCCG+AGG | + | chr1.4:87601045-87601064 | None:intergenic | 55.0% | |
GCCTCCGCTTGATGGGATAA+AGG | + | chr1.4:87599133-87599152 | None:intergenic | 55.0% | |
! | GGAAGGCAAGTGGACTTGGA+GGG | + | chr1.4:87601059-87601078 | None:intergenic | 55.0% |
! | TGCTGGAAGGCAAGTGGACT+TGG | + | chr1.4:87601063-87601082 | None:intergenic | 55.0% |
! | TGGAAGGCAAGTGGACTTGG+AGG | + | chr1.4:87601060-87601079 | None:intergenic | 55.0% |
GGAGGGGCGGAAGAGATTCT+AGG | + | chr1.4:87599552-87599571 | None:intergenic | 60.0% | |
GGCCAGACAACGTGTCTCGT+TGG | + | chr1.4:87599891-87599910 | None:intergenic | 60.0% | |
GGTTCGACTTCATGGAGGGG+CGG | + | chr1.4:87599565-87599584 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 87596945 | 87601854 | 87596945 | ID=MS.gene90849 |
chr1.4 | mRNA | 87596945 | 87601854 | 87596945 | ID=MS.gene90849.t1;Parent=MS.gene90849 |
chr1.4 | exon | 87601597 | 87601854 | 87601597 | ID=MS.gene90849.t1.exon1;Parent=MS.gene90849.t1 |
chr1.4 | CDS | 87601597 | 87601854 | 87601597 | ID=cds.MS.gene90849.t1;Parent=MS.gene90849.t1 |
chr1.4 | exon | 87600788 | 87600917 | 87600788 | ID=MS.gene90849.t1.exon2;Parent=MS.gene90849.t1 |
chr1.4 | CDS | 87600788 | 87600917 | 87600788 | ID=cds.MS.gene90849.t1;Parent=MS.gene90849.t1 |
chr1.4 | exon | 87600405 | 87600682 | 87600405 | ID=MS.gene90849.t1.exon3;Parent=MS.gene90849.t1 |
chr1.4 | CDS | 87600405 | 87600682 | 87600405 | ID=cds.MS.gene90849.t1;Parent=MS.gene90849.t1 |
chr1.4 | exon | 87600014 | 87600082 | 87600014 | ID=MS.gene90849.t1.exon4;Parent=MS.gene90849.t1 |
chr1.4 | CDS | 87600014 | 87600082 | 87600014 | ID=cds.MS.gene90849.t1;Parent=MS.gene90849.t1 |
chr1.4 | exon | 87596945 | 87597463 | 87596945 | ID=MS.gene90849.t1.exon5;Parent=MS.gene90849.t1 |
chr1.4 | CDS | 87596945 | 87597463 | 87596945 | ID=cds.MS.gene90849.t1;Parent=MS.gene90849.t1 |
Gene Sequence |
Protein sequence |