AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene91196

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene91196.t1 MTR_1g069805 83.636 275 4 1 1 234 1 275 1.52e-171 473
MS.gene91196.t1 MTR_7g097090 66.096 292 40 5 1 234 1 291 3.19e-126 359
MS.gene91196.t1 MTR_2g064470 62.025 158 51 3 6 158 7 160 2.01e-65 205
MS.gene91196.t1 MTR_4g108760 45.089 224 102 6 10 217 17 235 4.33e-61 196
MS.gene91196.t1 MTR_2g078700 56.250 160 64 1 8 161 21 180 5.16e-61 196
MS.gene91196.t1 MTR_3g109340 50.000 186 78 4 9 180 21 205 2.33e-59 191
MS.gene91196.t1 MTR_3g109340 49.733 187 78 4 9 180 21 206 6.95e-59 190
MS.gene91196.t1 MTR_1g008740 52.830 159 71 2 2 156 19 177 3.83e-58 188
MS.gene91196.t1 MTR_1g008740 52.830 159 71 2 2 156 5 163 4.81e-58 187
MS.gene91196.t1 MTR_5g021710 48.241 199 89 6 8 194 6 202 2.68e-57 186
MS.gene91196.t1 MTR_3g435150 42.553 235 120 6 10 234 16 245 8.44e-57 183
MS.gene91196.t1 MTR_8g076110 42.791 215 112 6 8 214 4 215 9.44e-57 183
MS.gene91196.t1 MTR_3g070030 48.087 183 84 4 10 183 19 199 1.45e-56 184
MS.gene91196.t1 MTR_4g036030 51.829 164 72 3 8 166 5 166 3.61e-56 182
MS.gene91196.t1 MTR_6g084430 55.629 151 63 2 9 157 4 152 4.01e-56 182
MS.gene91196.t1 MTR_6g032770 53.503 157 67 2 10 160 18 174 4.26e-56 183
MS.gene91196.t1 MTR_7g085260 54.037 161 66 3 5 157 12 172 1.70e-55 182
MS.gene91196.t1 MTR_6g012670 47.429 175 84 2 10 178 20 192 2.80e-54 177
MS.gene91196.t1 MTR_5g012080 52.903 155 66 3 8 156 5 158 2.90e-54 177
MS.gene91196.t1 MTR_3g116070 51.205 166 75 3 10 169 23 188 5.31e-54 177
MS.gene91196.t1 MTR_4g035590 54.902 153 63 3 8 156 6 156 7.35e-54 177
MS.gene91196.t1 MTR_4g101680 52.229 157 68 3 8 159 5 159 2.78e-53 176
MS.gene91196.t1 MTR_2g080010 44.724 199 90 3 9 187 14 212 2.82e-52 172
MS.gene91196.t1 MTR_7g085220 41.333 225 104 4 9 206 7 230 4.64e-52 172
MS.gene91196.t1 MTR_6g477900 52.258 155 66 3 8 156 4 156 5.55e-52 168
MS.gene91196.t1 MTR_2g064090 54.194 155 62 3 9 156 5 157 7.05e-52 171
MS.gene91196.t1 MTR_4g089135 39.516 248 112 5 10 230 15 251 4.72e-51 169
MS.gene91196.t1 MTR_7g005280 48.235 170 81 3 10 177 15 179 7.77e-51 166
MS.gene91196.t1 MTR_7g011130 45.078 193 77 4 13 178 22 212 8.92e-51 169
MS.gene91196.t1 MTR_1g096430 51.592 157 69 4 5 156 2 156 1.16e-50 168
MS.gene91196.t1 MTR_2g062730 48.795 166 79 4 9 169 9 173 1.04e-49 166
MS.gene91196.t1 MTR_3g064580 54.140 157 63 3 8 157 4 158 1.07e-49 172
MS.gene91196.t1 MTR_4g081870 37.815 238 125 8 6 231 5 231 1.41e-49 163
MS.gene91196.t1 MTR_8g094580 50.625 160 67 3 10 160 7 163 1.43e-49 164
MS.gene91196.t1 MTR_3g088110 51.899 158 64 3 10 159 7 160 2.12e-49 163
MS.gene91196.t1 MTR_5g041940 47.097 155 72 2 10 156 3 155 4.11e-49 162
MS.gene91196.t1 MTR_5g076850 55.128 156 62 4 8 157 4 157 1.39e-48 169
MS.gene91196.t1 MTR_2g093810 45.455 176 88 2 9 176 13 188 1.98e-48 162
MS.gene91196.t1 MTR_7g011120 44.385 187 85 4 13 183 11 194 2.19e-48 161
MS.gene91196.t1 MTR_3g096920 50.625 160 66 4 10 160 7 162 2.65e-48 160
MS.gene91196.t1 MTR_2157s0010 47.531 162 71 3 10 157 8 169 3.45e-48 159
MS.gene91196.t1 MTR_7g100990 47.742 155 73 1 10 156 11 165 5.17e-47 158
MS.gene91196.t1 MTR_2g079990 42.180 211 104 5 1 197 3 209 2.30e-46 157
MS.gene91196.t1 MTR_8g024480 45.455 165 72 4 8 156 13 175 2.55e-46 159
MS.gene91196.t1 MTR_5g014300 49.398 166 76 4 7 164 3 168 2.77e-46 157
MS.gene91196.t1 MTR_8g059170 47.771 157 74 2 9 159 13 167 8.50e-45 152
MS.gene91196.t1 MTR_8g467490 42.262 168 84 2 12 166 16 183 3.46e-44 152
MS.gene91196.t1 MTR_3g096920 55.039 129 53 2 10 137 7 131 9.48e-44 150
MS.gene91196.t1 MTR_5g040420 35.545 211 121 2 12 210 16 223 3.41e-43 150
MS.gene91196.t1 MTR_3g070040 38.679 212 97 6 14 197 12 218 3.44e-43 149
MS.gene91196.t1 MTR_1g090720 47.531 162 67 4 9 156 41 198 1.91e-42 150
MS.gene91196.t1 MTR_2g079990 52.448 143 58 3 1 137 3 141 4.30e-42 147
MS.gene91196.t1 MTR_6g011860 43.125 160 77 3 10 156 15 173 6.63e-42 147
MS.gene91196.t1 MTR_3g096140 45.695 151 74 3 12 156 9 157 2.30e-41 142
MS.gene91196.t1 MTR_4g098630 44.886 176 86 4 7 173 3 176 2.48e-41 143
MS.gene91196.t1 MTR_3g093040 47.403 154 73 3 9 156 107 258 1.01e-40 142
MS.gene91196.t1 MTR_0036s0150 48.052 154 72 4 12 159 7 158 1.24e-40 146
MS.gene91196.t1 MTR_3g096140 45.695 151 74 3 12 156 9 157 1.58e-40 142
MS.gene91196.t1 MTR_1g090723 42.574 202 104 7 12 206 10 206 2.53e-40 145
MS.gene91196.t1 MTR_1g090723 41.379 203 106 6 12 206 10 207 2.60e-40 146
MS.gene91196.t1 MTR_1g090723 42.574 202 104 7 12 206 10 206 2.80e-40 146
MS.gene91196.t1 MTR_4g134460 45.860 157 80 3 12 165 56 210 2.34e-39 140
MS.gene91196.t1 MTR_5g069030 49.020 153 70 3 10 156 25 175 2.97e-39 143
MS.gene91196.t1 MTR_3g093050 35.798 257 121 8 9 226 21 272 4.62e-39 142
MS.gene91196.t1 MTR_3g093050 35.798 257 121 8 9 226 21 272 6.30e-39 142
MS.gene91196.t1 MTR_5g090970 41.509 159 79 2 12 156 20 178 1.16e-38 136
MS.gene91196.t1 MTR_8g063550 43.137 153 79 3 10 156 6 156 8.78e-38 135
MS.gene91196.t1 MTR_8g063550 43.137 153 79 3 10 156 6 156 1.90e-37 136
MS.gene91196.t1 MTR_8g063550 43.137 153 79 3 10 156 6 156 2.73e-37 135
MS.gene91196.t1 MTR_5g090970 41.509 159 78 3 12 156 20 177 9.91e-37 131
MS.gene91196.t1 MTR_8g023840 46.939 147 73 4 10 153 11 155 1.57e-36 132
MS.gene91196.t1 MTR_4g075980 43.046 151 80 3 12 159 17 164 1.67e-36 130
MS.gene91196.t1 MTR_1g097300 44.737 152 76 3 12 157 21 170 2.85e-36 134
MS.gene91196.t1 MTR_8g099750 40.000 160 85 3 3 153 7 164 3.19e-36 127
MS.gene91196.t1 MTR_2g068880 40.909 176 84 5 12 167 24 199 6.82e-36 129
MS.gene91196.t1 MTR_2g068920 40.719 167 81 4 12 160 23 189 1.43e-35 127
MS.gene91196.t1 MTR_3g098810 41.212 165 83 3 8 160 12 174 1.03e-34 124
MS.gene91196.t1 MTR_8g023860 43.537 147 78 4 10 153 12 156 1.53e-34 127
MS.gene91196.t1 MTR_8g093580 41.176 153 82 3 10 156 6 156 2.08e-34 128
MS.gene91196.t1 MTR_2g086880 43.624 149 78 4 6 153 14 157 2.99e-33 126
MS.gene91196.t1 MTR_2g086880 38.298 188 105 5 6 187 14 196 3.37e-33 125
MS.gene91196.t1 MTR_2g086690 42.405 158 75 6 11 154 5 160 7.06e-33 119
MS.gene91196.t1 MTR_3g098810 46.212 132 67 2 8 137 12 141 1.92e-32 116
MS.gene91196.t1 MTR_3g096140 42.754 138 71 3 25 156 1 136 2.00e-32 120
MS.gene91196.t1 MTR_8g023900 41.615 161 84 5 4 156 182 340 1.17e-31 120
MS.gene91196.t1 MTR_8g023900 37.640 178 101 6 10 178 12 188 4.19e-28 111
MS.gene91196.t1 MTR_4g052620 38.365 159 81 5 10 154 5 160 1.84e-31 116
MS.gene91196.t1 MTR_4g094302 36.364 165 85 3 10 163 11 166 3.57e-31 114
MS.gene91196.t1 MTR_7g105170 36.364 165 89 6 9 158 3 166 1.39e-29 111
MS.gene91196.t1 MTR_4g094302 41.406 128 67 1 10 137 11 130 1.87e-29 108
MS.gene91196.t1 MTR_8g094580 52.381 105 38 3 65 160 8 109 2.32e-29 110
MS.gene91196.t1 MTR_8g023930 38.994 159 92 4 10 165 24 180 3.01e-29 114
MS.gene91196.t1 MTR_8g023880 38.286 175 81 7 5 160 2 168 3.21e-29 110
MS.gene91196.t1 MTR_7g070140 53.750 80 37 0 65 144 19 98 6.58e-26 98.6
MS.gene91196.t1 MTR_8g093790 37.500 152 77 5 7 158 7 140 5.10e-22 89.7
MS.gene91196.t1 MTR_7g070150 59.649 57 22 1 105 160 5 61 3.84e-19 79.3
MS.gene91196.t1 MTR_7g083330 27.692 195 116 6 7 193 15 192 5.93e-18 79.3
MS.gene91196.t1 MTR_3g096400 29.143 175 97 5 10 169 7 169 2.75e-17 77.8
MS.gene91196.t1 MTR_7g083370 34.459 148 81 5 1 141 1 139 6.11e-17 75.1
MS.gene91196.t1 MTR_7g083360 29.932 147 97 4 1 145 1 143 1.82e-16 74.3
MS.gene91196.t1 MTR_2g014680 29.448 163 96 5 10 156 53 212 4.95e-12 64.7
MS.gene91196.t1 MTR_2g090735 28.485 165 95 6 10 156 49 208 8.16e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene91196.t1 AT4G28530 72.414 174 32 2 1 158 1 174 2.79e-89 267
MS.gene91196.t1 AT1G76420 57.500 160 65 1 9 165 21 180 1.91e-62 198
MS.gene91196.t1 AT2G24430 56.291 151 63 1 9 156 15 165 3.16e-61 194
MS.gene91196.t1 AT2G24430 56.291 151 63 1 9 156 15 165 3.16e-61 194
MS.gene91196.t1 AT1G56010 58.491 159 56 3 6 156 15 171 1.09e-60 193
MS.gene91196.t1 AT2G18060 46.544 217 104 7 7 214 6 219 1.31e-60 194
MS.gene91196.t1 AT2G18060 46.544 217 104 7 7 214 6 219 1.31e-60 194
MS.gene91196.t1 AT5G53950 50.276 181 84 1 10 184 17 197 1.22e-59 192
MS.gene91196.t1 AT5G07680 57.516 153 57 3 10 156 3 153 1.57e-58 187
MS.gene91196.t1 AT3G12977 56.410 156 61 3 6 156 14 167 2.04e-58 186
MS.gene91196.t1 AT5G07680 56.329 158 61 3 5 156 12 167 2.08e-58 188
MS.gene91196.t1 AT5G61430 48.705 193 89 4 10 196 16 204 4.91e-58 187
MS.gene91196.t1 AT4G36160 46.667 195 93 5 5 190 9 201 1.37e-57 187
MS.gene91196.t1 AT4G36160 46.667 195 93 5 5 190 5 197 1.51e-57 187
MS.gene91196.t1 AT4G36160 46.667 195 93 5 5 190 5 197 1.51e-57 187
MS.gene91196.t1 AT3G18400 53.797 158 68 3 9 163 4 159 2.13e-57 185
MS.gene91196.t1 AT5G39610 55.556 153 60 2 10 156 20 170 4.84e-56 180
MS.gene91196.t1 AT1G12260 53.947 152 63 3 10 156 7 156 1.31e-55 181
MS.gene91196.t1 AT5G18270 53.892 167 66 4 10 170 21 182 1.60e-55 181
MS.gene91196.t1 AT5G18270 53.892 167 66 4 10 170 21 182 1.77e-55 181
MS.gene91196.t1 AT3G15170 52.288 153 67 1 10 156 20 172 2.47e-55 179
MS.gene91196.t1 AT1G12260 53.247 154 65 3 8 156 5 156 2.53e-55 182
MS.gene91196.t1 AT4G28530 53.448 174 28 3 1 158 1 137 7.55e-55 178
MS.gene91196.t1 AT1G62700 53.247 154 65 3 8 156 5 156 9.72e-55 180
MS.gene91196.t1 AT1G62700 53.247 154 65 3 8 156 5 156 9.72e-55 180
MS.gene91196.t1 AT5G66300 53.086 162 68 4 4 159 6 165 1.27e-54 177
MS.gene91196.t1 AT3G04060 55.556 153 61 3 10 156 20 171 8.33e-54 176
MS.gene91196.t1 AT3G29035 55.263 152 60 2 10 155 24 173 9.13e-54 176
MS.gene91196.t1 AT3G04070 47.953 171 75 2 1 157 1 171 1.02e-53 176
MS.gene91196.t1 AT1G33280 54.902 153 63 3 8 156 6 156 5.22e-53 173
MS.gene91196.t1 AT4G10350 53.988 163 65 5 1 156 1 160 7.00e-53 174
MS.gene91196.t1 AT1G71930 52.597 154 66 3 8 156 7 158 8.51e-52 171
MS.gene91196.t1 AT1G71930 52.597 154 66 3 8 156 7 158 8.51e-52 171
MS.gene91196.t1 AT5G62380 46.809 188 89 5 8 187 5 189 1.18e-51 171
MS.gene91196.t1 AT5G62380 46.809 188 89 5 8 187 5 189 1.18e-51 171
MS.gene91196.t1 AT3G17730 47.222 180 85 4 10 183 6 181 1.49e-51 167
MS.gene91196.t1 AT3G04070 43.850 187 75 2 1 157 1 187 3.23e-51 170
MS.gene91196.t1 AT1G61110 48.603 179 72 4 1 160 4 181 6.39e-51 168
MS.gene91196.t1 AT1G54330 55.921 152 62 3 9 157 5 154 7.57e-51 167
MS.gene91196.t1 AT3G03200 42.995 207 95 5 8 207 4 194 8.25e-51 172
MS.gene91196.t1 AT5G17260 48.256 172 80 3 8 172 4 173 1.48e-50 171
MS.gene91196.t1 AT1G01720 45.989 187 86 4 10 184 7 190 1.48e-49 164
MS.gene91196.t1 AT1G79580 51.316 152 69 3 9 156 16 166 1.02e-48 164
MS.gene91196.t1 AT1G79580 51.316 152 69 3 9 156 16 166 1.02e-48 164
MS.gene91196.t1 AT1G79580 51.316 152 69 3 9 156 16 166 1.02e-48 164
MS.gene91196.t1 AT1G79580 51.316 152 69 3 9 156 16 166 1.02e-48 164
MS.gene91196.t1 AT1G79580 51.316 152 69 3 9 156 16 166 1.02e-48 164
MS.gene91196.t1 AT3G61910 43.147 197 87 5 8 183 9 201 1.37e-48 162
MS.gene91196.t1 AT1G65910 52.795 161 66 4 8 161 4 161 1.59e-48 169
MS.gene91196.t1 AT5G08790 48.750 160 70 2 9 159 6 162 5.77e-48 159
MS.gene91196.t1 AT3G15500 49.390 164 73 3 1 156 1 162 2.29e-47 159
MS.gene91196.t1 AT4G27410 46.286 175 84 4 1 167 1 173 2.44e-47 158
MS.gene91196.t1 AT5G63790 48.750 160 70 2 9 159 49 205 2.79e-47 159
MS.gene91196.t1 AT1G52890 51.316 152 68 2 9 156 13 162 3.48e-47 159
MS.gene91196.t1 AT5G63790 48.750 160 70 2 9 159 59 215 3.70e-47 159
MS.gene91196.t1 AT1G77450 42.029 207 101 6 7 198 5 207 3.74e-47 157
MS.gene91196.t1 AT2G46770 43.787 169 73 3 8 156 14 180 4.17e-47 159
MS.gene91196.t1 AT1G69490 45.860 157 75 2 8 156 7 161 7.62e-47 156
MS.gene91196.t1 AT1G32770 41.117 197 90 5 8 180 14 208 9.07e-47 159
MS.gene91196.t1 AT3G10490 48.148 162 75 3 2 156 19 178 1.28e-46 155
MS.gene91196.t1 AT3G10480 50.318 157 69 3 7 156 24 178 2.36e-46 159
MS.gene91196.t1 AT5G04410 49.045 157 72 3 9 159 8 162 3.49e-46 161
MS.gene91196.t1 AT3G15510 40.933 193 94 3 14 186 21 213 4.47e-46 157
MS.gene91196.t1 AT5G46590 45.143 175 88 3 7 174 3 176 5.86e-46 155
MS.gene91196.t1 AT1G33060 52.597 154 65 3 9 156 23 174 7.70e-46 161
MS.gene91196.t1 AT1G33060 52.597 154 65 3 9 156 23 174 7.99e-46 161
MS.gene91196.t1 AT5G13180 47.742 155 75 2 10 161 14 165 1.39e-45 152
MS.gene91196.t1 AT4G35580 53.247 154 64 3 9 156 8 159 2.98e-45 158
MS.gene91196.t1 AT3G10480 51.282 156 68 4 7 156 24 177 3.31e-45 156
MS.gene91196.t1 AT4G35580 53.247 154 64 3 9 156 8 159 3.48e-45 158
MS.gene91196.t1 AT4G35580 53.247 154 64 3 9 156 8 159 3.62e-45 158
MS.gene91196.t1 AT3G10490 47.853 163 76 3 2 157 19 179 4.03e-45 156
MS.gene91196.t1 AT4G17980 47.531 162 73 3 7 158 3 162 4.36e-44 149
MS.gene91196.t1 AT5G39820 37.566 189 92 2 12 174 22 210 7.24e-44 150
MS.gene91196.t1 AT4G17980 47.531 162 73 3 7 158 3 162 8.31e-44 149
MS.gene91196.t1 AT3G10500 48.052 154 72 3 9 156 8 159 1.63e-43 154
MS.gene91196.t1 AT1G32510 42.708 192 90 5 6 180 2 190 2.45e-43 147
MS.gene91196.t1 AT2G33480 46.795 156 76 3 10 163 15 165 3.73e-43 147
MS.gene91196.t1 AT5G46590 51.128 133 62 2 7 137 3 134 4.43e-43 147
MS.gene91196.t1 AT4G27410 42.708 192 83 6 1 167 1 190 4.81e-43 148
MS.gene91196.t1 AT2G33480 46.203 158 76 3 10 163 15 167 7.81e-43 146
MS.gene91196.t1 AT1G26870 38.298 188 100 3 10 183 16 201 1.74e-42 149
MS.gene91196.t1 AT1G56010 64.151 106 29 2 58 156 1 104 3.64e-42 144
MS.gene91196.t1 AT2G43000 42.593 162 84 3 12 167 20 178 3.69e-42 144
MS.gene91196.t1 AT5G24590 43.407 182 96 3 8 183 11 191 4.35e-42 148
MS.gene91196.t1 AT3G10480 41.885 191 69 4 7 157 24 212 2.17e-40 145
MS.gene91196.t1 AT3G49530 45.455 154 77 3 9 156 12 164 7.32e-40 142
MS.gene91196.t1 AT3G12977 60.748 107 35 3 55 156 10 114 9.95e-40 137
MS.gene91196.t1 AT3G49530 45.455 154 77 3 9 156 12 164 1.22e-39 142
MS.gene91196.t1 AT2G02450 44.304 158 81 3 12 165 53 207 2.12e-39 140
MS.gene91196.t1 AT1G52880 45.342 161 72 3 14 159 21 180 3.12e-39 138
MS.gene91196.t1 AT2G02450 44.304 158 81 3 12 165 53 207 3.72e-39 140
MS.gene91196.t1 AT2G27300 44.898 147 75 3 8 153 12 153 6.04e-38 135
MS.gene91196.t1 AT2G17040 42.282 149 84 2 12 159 8 155 8.15e-37 130
MS.gene91196.t1 AT5G09330 43.791 153 78 3 10 156 6 156 1.09e-36 134
MS.gene91196.t1 AT5G09330 43.791 153 78 3 10 156 6 156 1.09e-36 134
MS.gene91196.t1 AT5G09330 43.791 153 78 3 10 156 6 156 1.09e-36 134
MS.gene91196.t1 AT5G09330 43.791 153 78 3 10 156 6 156 1.09e-36 134
MS.gene91196.t1 AT5G09330 43.791 153 78 3 10 156 6 156 1.09e-36 134
MS.gene91196.t1 AT5G61430 59.048 105 35 3 58 156 1 103 1.29e-36 130
MS.gene91196.t1 AT1G34180 40.764 157 85 3 6 156 12 166 4.01e-36 132
MS.gene91196.t1 AT1G34190 41.722 151 80 3 12 156 18 166 1.18e-35 132
MS.gene91196.t1 AT1G34180 41.722 151 80 3 12 156 18 166 1.35e-35 132
MS.gene91196.t1 AT4G10350 57.798 109 37 4 55 156 7 113 1.29e-34 125
MS.gene91196.t1 AT1G34180 37.870 169 85 3 6 156 12 178 4.20e-34 127
MS.gene91196.t1 AT3G12910 42.286 175 79 6 12 167 23 194 4.75e-34 124
MS.gene91196.t1 AT1G34180 37.870 169 85 3 6 156 12 178 1.28e-33 127
MS.gene91196.t1 AT5G64060 39.610 154 85 3 9 156 5 156 2.27e-33 123
MS.gene91196.t1 AT1G32870 43.902 164 80 4 1 156 1 160 3.73e-33 125
MS.gene91196.t1 AT1G32870 43.902 164 80 4 1 156 1 160 3.84e-33 125
MS.gene91196.t1 AT1G32870 43.902 164 80 4 1 156 37 196 6.59e-33 125
MS.gene91196.t1 AT5G04395 42.384 151 73 2 1 137 19 169 1.14e-32 117
MS.gene91196.t1 AT5G22290 39.103 156 85 4 4 153 10 161 2.05e-31 118
MS.gene91196.t1 AT3G44290 39.860 143 80 3 12 153 16 153 7.78e-31 114
MS.gene91196.t1 AT3G44290 39.860 143 80 3 12 153 16 153 3.67e-30 114
MS.gene91196.t1 AT3G44350 34.649 228 131 8 6 219 1 224 7.08e-30 112
MS.gene91196.t1 AT4G01550 38.667 150 87 4 13 158 7 155 8.27e-29 113
MS.gene91196.t1 AT5G64530 32.941 170 84 3 9 160 2 159 4.59e-28 105
MS.gene91196.t1 AT2G18060 43.609 133 66 6 88 214 2 131 5.78e-28 107
MS.gene91196.t1 AT3G44350 41.912 136 73 3 6 136 1 135 2.75e-27 102
MS.gene91196.t1 AT2G33480 48.077 104 48 2 64 163 9 110 9.84e-27 102
MS.gene91196.t1 AT5G22380 35.260 173 99 5 13 173 8 179 1.31e-26 103
MS.gene91196.t1 AT4G01520 34.595 185 105 9 11 189 5 179 2.57e-26 103
MS.gene91196.t1 AT4G01540 34.973 183 103 9 13 189 7 179 1.30e-25 103
MS.gene91196.t1 AT4G01540 34.973 183 103 9 13 189 7 179 1.37e-25 103
MS.gene91196.t1 AT4G01540 34.973 183 103 9 13 189 7 179 1.55e-25 103
MS.gene91196.t1 AT4G01540 34.973 183 103 9 13 189 7 179 1.78e-25 103
MS.gene91196.t1 AT5G64530 37.209 129 69 2 9 137 2 118 1.91e-25 98.2
MS.gene91196.t1 AT1G02230 37.908 153 87 5 11 158 4 153 4.28e-25 101
MS.gene91196.t1 AT3G04420 33.775 151 93 4 11 157 4 151 2.96e-23 95.5
MS.gene91196.t1 AT3G04420 33.775 151 93 4 11 157 4 151 4.87e-23 95.9
MS.gene91196.t1 AT1G01010 30.603 232 130 10 13 231 6 219 4.50e-20 88.6
MS.gene91196.t1 AT3G10490 52.500 80 31 2 83 157 2 79 1.23e-19 86.7
MS.gene91196.t1 AT3G10490 52.500 80 31 2 83 157 2 79 1.23e-19 86.7
MS.gene91196.t1 AT2G43000 39.640 111 58 3 71 175 1 108 3.18e-19 82.8
MS.gene91196.t1 AT1G02250 32.680 153 95 4 11 158 4 153 2.15e-18 83.2
MS.gene91196.t1 AT1G02220 31.126 151 94 5 11 157 4 148 6.19e-18 82.0
MS.gene91196.t1 AT3G04430 36.957 138 73 5 16 141 6 141 1.98e-17 77.8
MS.gene91196.t1 AT3G56530 27.815 151 102 4 9 154 51 199 1.19e-16 77.8
MS.gene91196.t1 AT5G50820 37.226 137 62 6 10 137 17 138 4.96e-16 73.9
MS.gene91196.t1 AT5G14000 31.579 133 85 3 7 137 12 140 3.73e-14 68.2
MS.gene91196.t1 AT3G55210 26.994 163 103 4 6 154 7 167 8.41e-14 69.3
MS.gene91196.t1 AT5G14000 31.579 133 85 3 7 137 12 140 1.57e-13 67.4
MS.gene91196.t1 AT1G28470 30.508 177 102 8 9 168 76 248 2.39e-12 65.5
MS.gene91196.t1 AT5G22290 47.692 65 30 2 89 153 2 62 2.01e-11 62.4

Find 67 sgRNAs with CRISPR-Local

Find 183 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTTCTTGTGGACTTAATT+TGG 0.161042 1.4:-56726839 None:intergenic
CCCAGATGTTGTTGCCCTAT+TGG 0.241618 1.4:-56725764 None:intergenic
TTGGCATGGTTTGGTTGGTT+AGG 0.262175 1.4:-56726882 None:intergenic
CCATATCCATCATCACATTT+AGG 0.299554 1.4:-56727051 None:intergenic
ACCAATAGGGCAACAACATC+TGG 0.310609 1.4:+56725763 MS.gene91196:CDS
CCTAAATGTGATGATGGATA+TGG 0.311726 1.4:+56727051 MS.gene91196:CDS
TAAAACCTGTGGCATATTTA+CGG 0.326045 1.4:-56725738 None:intergenic
TGCGAGCCTTGGCAACTTCC+TGG 0.343644 1.4:+56723812 MS.gene91196:CDS
GTTGGATCATGCATGAGTTT+AGG 0.344473 1.4:+56725905 MS.gene91196:CDS
TGGCATGGTTTGGTTGGTTA+GGG 0.355057 1.4:-56726881 None:intergenic
ACCAACCAAACCATGCCAAT+TGG 0.386891 1.4:+56726886 MS.gene91196:CDS
TGGTTTGGTTGGTTAGGGAT+GGG 0.392064 1.4:-56726876 None:intergenic
GGTTTGGTTGGTTAGGGATG+GGG 0.395087 1.4:-56726875 None:intergenic
GGAAAACTCTAGTGTTCTAT+AGG 0.402144 1.4:+56725854 MS.gene91196:CDS
ATGGTTTGGTTGGTTAGGGA+TGG 0.404562 1.4:-56726877 None:intergenic
CGTACCTTAGGTGGCATATG+TGG 0.408299 1.4:-56725937 None:intergenic
CCAACCAAACCATGCCAATT+GGG 0.419454 1.4:+56726887 MS.gene91196:CDS
CCTACAACCTCATGTGTGAT+TGG 0.419579 1.4:-56725826 None:intergenic
GCTCCAAATGGAATCAAAAC+AGG 0.425014 1.4:+56725883 MS.gene91196:CDS
TGTACCCAATTGGCATGGTT+TGG 0.430448 1.4:-56726891 None:intergenic
TTGTGTAGAGTATTTCATAA+AGG 0.437100 1.4:+56726799 MS.gene91196:CDS
GGGCAACAACATCTGGGTAT+TGG 0.439791 1.4:+56725770 MS.gene91196:CDS
GCAAATTGGTTGTACCCAAT+TGG 0.440675 1.4:-56726901 None:intergenic
TTTGTTGATTACAGGAAGAC+TGG 0.444436 1.4:+56726773 MS.gene91196:intron
CCAATCACACATGAGGTTGT+AGG 0.470021 1.4:+56725826 MS.gene91196:CDS
TCTGGGTATTGGAAAGCAAC+AGG 0.476335 1.4:+56725781 MS.gene91196:CDS
ATTAGTCCTAAATGTGATGA+TGG 0.485409 1.4:+56727045 MS.gene91196:CDS
CCCAATTGGCATGGTTTGGT+TGG 0.487255 1.4:-56726887 None:intergenic
CTAGGATAAAATCGAAAGCC+AGG 0.494510 1.4:-56723698 None:intergenic
CACAAATGAGGATGTTCTCA+AGG 0.510472 1.4:+56723760 MS.gene91196:CDS
CGTGACCGTAAATATGCCAC+AGG 0.515429 1.4:+56725733 MS.gene91196:CDS
GATCATGCATGAGTTTAGGT+TGG 0.515996 1.4:+56725909 MS.gene91196:CDS
ACTTGCATACATGCGAGCCT+TGG 0.522819 1.4:+56723801 MS.gene91196:CDS
TTATCCTAGTGATGAAGAGT+TGG 0.524957 1.4:+56723712 MS.gene91196:CDS
CTAAACTCAACGCAACTGAA+TGG 0.538893 1.4:+56725695 MS.gene91196:CDS
TATAGGAATAGAGCTCCAAA+TGG 0.544085 1.4:+56725871 MS.gene91196:CDS
GGATGTTCTCAAGGGTACCT+TGG 0.551085 1.4:+56723769 MS.gene91196:CDS
TGTTCTCAAGGGTACCTTGG+AGG 0.553598 1.4:+56723772 MS.gene91196:CDS
CACATGAGGTTGTAGGAATG+AGG 0.561923 1.4:+56725833 MS.gene91196:CDS
GTACCTTAGGTGGCATATGT+GGG 0.562749 1.4:-56725936 None:intergenic
CTAAATGTGATGATGGATAT+GGG 0.563079 1.4:+56727052 MS.gene91196:CDS
CAAATGGAATCAAAACAGGT+TGG 0.568983 1.4:+56725887 MS.gene91196:CDS
ATAGTCTCATACATTTCTTG+TGG 0.571583 1.4:-56726850 None:intergenic
ATCATGGGTCTTAGAGATGT+CGG 0.583109 1.4:+56723662 None:intergenic
TTGGTTGTACCCAATTGGCA+TGG 0.593786 1.4:-56726896 None:intergenic
AGGACCAACTCTTCATCACT+AGG 0.594537 1.4:-56723716 None:intergenic
TTGTTGATTACAGGAAGACT+GGG 0.594796 1.4:+56726774 MS.gene91196:intron
CATGGAAGGAATGAGATTCG+AGG 0.594984 1.4:+56727128 MS.gene91196:CDS
GACCCCACATATGCCACCTA+AGG 0.595376 1.4:+56725933 MS.gene91196:CDS
CCAATAGGGCAACAACATCT+GGG 0.597019 1.4:+56725764 MS.gene91196:CDS
TATATACCAGGAAGTTGCCA+AGG 0.602199 1.4:-56723818 None:intergenic
TAGGATAAAATCGAAAGCCA+GGG 0.604860 1.4:-56723697 None:intergenic
CATTCCTTCCATGTCTGATG+AGG 0.604861 1.4:-56727118 None:intergenic
ATGCAAGTCAATTTCCTCCA+AGG 0.605909 1.4:-56723786 None:intergenic
CCTATTGGTTCTAAAACCTG+TGG 0.612834 1.4:-56725749 None:intergenic
CGAGGTTGATAATAATAGCA+TGG 0.613330 1.4:+56727146 MS.gene91196:CDS
AGCAACAGGAAAGGATCGAA+CGG 0.629108 1.4:+56725795 MS.gene91196:CDS
TGGTGTGGCCTCATCAGACA+TGG 0.638421 1.4:+56727110 MS.gene91196:CDS
TACCTTAGGTGGCATATGTG+GGG 0.640655 1.4:-56725935 None:intergenic
GTTTGATCCAATCACACATG+AGG 0.642011 1.4:+56725819 MS.gene91196:CDS
GTGGCCTCATCAGACATGGA+AGG 0.645880 1.4:+56727114 MS.gene91196:CDS
ACAAATGAGGATGTTCTCAA+GGG 0.646017 1.4:+56723761 MS.gene91196:CDS
GTATTGGAAAGCAACAGGAA+AGG 0.658210 1.4:+56725786 MS.gene91196:CDS
GATTTGGAAGATCATCATGA+TGG 0.674805 1.4:+56727090 MS.gene91196:CDS
GGAAGATCATCATGATGGTG+TGG 0.675111 1.4:+56727095 MS.gene91196:CDS
AGGATAAAATCGAAAGCCAG+GGG 0.675897 1.4:-56723696 None:intergenic
GGATAAAATCGAAAGCCAGG+GGG 0.720221 1.4:-56723695 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATAAAAAAATTATTTAT+TGG - chr1.4:56724306-56724325 None:intergenic 0.0%
!!! AATAATTTTTTTATATAATA+TGG + chr1.4:56724309-56724328 MS.gene91196:intron 0.0%
!! AATAAAATAAAAGAGAAAAT+TGG + chr1.4:56724178-56724197 MS.gene91196:intron 10.0%
!! TTAGGTATAAATAAAAAAAT+TGG + chr1.4:56726149-56726168 MS.gene91196:intron 10.0%
!! AAAAAAATTATCGTTATTGA+TGG + chr1.4:56725006-56725025 MS.gene91196:intron 15.0%
!! AAAGAAGAAGAAATAATTAA+AGG + chr1.4:56724102-56724121 MS.gene91196:intron 15.0%
!! ATAAATCTCTTAATAAGATT+TGG - chr1.4:56726607-56726626 None:intergenic 15.0%
!! CAATAATGACAAAAATAATT+TGG - chr1.4:56725481-56725500 None:intergenic 15.0%
!! TCAACTCATAAATAAATATA+AGG - chr1.4:56724035-56724054 None:intergenic 15.0%
!! TGATAAATATAATATATACC+AGG - chr1.4:56723833-56723852 None:intergenic 15.0%
!! TTAACCAAAGAATTAATATA+TGG - chr1.4:56723926-56723945 None:intergenic 15.0%
!! TTAACCATATATTAATTCTT+TGG + chr1.4:56723919-56723938 MS.gene91196:intron 15.0%
!!! AATTCATCAAAGAATTATTT+TGG - chr1.4:56726975-56726994 None:intergenic 15.0%
!!! ATTTAAAGTGTATACAAAAT+AGG + chr1.4:56724911-56724930 MS.gene91196:intron 15.0%
!!! CTTTAAAAATCTAGTTATTT+TGG + chr1.4:56726717-56726736 MS.gene91196:intron 15.0%
!!! GTTTTTTTTTATTTATTCAG+AGG + chr1.4:56725669-56725688 MS.gene91196:intron 15.0%
!!! TGTTTTAATGTTTTTTGAAA+TGG - chr1.4:56726359-56726378 None:intergenic 15.0%
!!! TTATATGTGTAGTTTTTATT+AGG + chr1.4:56726131-56726150 MS.gene91196:intron 15.0%
!! ACAAAAGCAATTATGTAAAA+CGG - chr1.4:56724350-56724369 None:intergenic 20.0%
!! AGAATAGAATATTTCATAAG+TGG + chr1.4:56726650-56726669 MS.gene91196:intron 20.0%
!! ATAAAAGAGAAAATTGGTTA+TGG + chr1.4:56724184-56724203 MS.gene91196:intron 20.0%
!! ATAGAGATCATAATATTGTT+TGG - chr1.4:56724421-56724440 None:intergenic 20.0%
!! ATTAATCAAATGAAAGTGAA+AGG - chr1.4:56724543-56724562 None:intergenic 20.0%
!! TAAAAGAGAAAATTGGTTAT+GGG + chr1.4:56724185-56724204 MS.gene91196:intron 20.0%
!! TAACATGAAAAATTGCTTAT+TGG - chr1.4:56725240-56725259 None:intergenic 20.0%
!! TACAACATCATTAATTAACT+TGG + chr1.4:56723969-56723988 MS.gene91196:intron 20.0%
!! TAGAGATCATAATATTGTTT+GGG - chr1.4:56724420-56724439 None:intergenic 20.0%
!! TTACAAAAAAATCACAAATG+AGG + chr1.4:56723748-56723767 MS.gene91196:CDS 20.0%
!! TTATGTTACAATTTATGACA+AGG - chr1.4:56724776-56724795 None:intergenic 20.0%
!!! AAAGTTTCCTTCTTTTAAAA+AGG - chr1.4:56724075-56724094 None:intergenic 20.0%
!!! ATATTTGCCTTTTTAAAAGA+AGG + chr1.4:56724065-56724084 MS.gene91196:intron 20.0%
!!! ATTAATCAAACATTAGCTTA+TGG + chr1.4:56725168-56725187 MS.gene91196:intron 20.0%
!!! CATTTGTGATTTTTTTGTAA+AGG - chr1.4:56723748-56723767 None:intergenic 20.0%
!!! GAATTTTCTTCAATTTTCTA+AGG + chr1.4:56726990-56727009 MS.gene91196:intron 20.0%
!!! GTATATTTTGTAGACTTTAA+TGG - chr1.4:56724974-56724993 None:intergenic 20.0%
!!! TTTTTAAAAGAAGGAAACTT+TGG + chr1.4:56724074-56724093 MS.gene91196:intron 20.0%
!!! TTTTTTTAATAAACTTGACG+TGG + chr1.4:56726466-56726485 MS.gene91196:intron 20.0%
!!! TTTTTTTATTTATTCAGAGG+TGG + chr1.4:56725672-56725691 MS.gene91196:intron 20.0%
!!! TTTTTTTGTAAAGGTAATGA+AGG - chr1.4:56723739-56723758 None:intergenic 20.0%
! AAAAGAGAAAATTGGTTATG+GGG + chr1.4:56724186-56724205 MS.gene91196:intron 25.0%
! AAGATAAAATATCTCCATCA+AGG - chr1.4:56726296-56726315 None:intergenic 25.0%
! ACGTTTGAAAATTGATTGAA+AGG - chr1.4:56725984-56726003 None:intergenic 25.0%
! ACTGAAAAATACAAAGAGAA+CGG + chr1.4:56725293-56725312 MS.gene91196:intron 25.0%
! AGTAAAAATAAACGTACCTT+AGG - chr1.4:56725952-56725971 None:intergenic 25.0%
! ATACACTATCAAAGCAAAAT+AGG + chr1.4:56724887-56724906 MS.gene91196:intron 25.0%
! ATATAGACTTAAATACATGC+AGG - chr1.4:56724637-56724656 None:intergenic 25.0%
! ATGTAATTGCCACATAATAA+AGG + chr1.4:56726060-56726079 MS.gene91196:intron 25.0%
! TCAATGATTAAGGCTATTAA+TGG + chr1.4:56724251-56724270 MS.gene91196:intron 25.0%
! TGTAATTGCCACATAATAAA+GGG + chr1.4:56726061-56726080 MS.gene91196:intron 25.0%
! TTAAAATAAGGTGAGAAAGT+TGG + chr1.4:56726513-56726532 MS.gene91196:intron 25.0%
! TTACAATTTATGACAAGGTA+TGG - chr1.4:56724771-56724790 None:intergenic 25.0%
!! AAACTCCTCTTTTTGTAAAT+GGG + chr1.4:56725265-56725284 MS.gene91196:intron 25.0%
!! AAATGATTCTCACGTATTTT+AGG + chr1.4:56726678-56726697 MS.gene91196:intron 25.0%
!! AGAGCTAGCTATTTAAAATA+AGG + chr1.4:56726501-56726520 MS.gene91196:intron 25.0%
!! ATCGTTATTGATGGTAAAAT+TGG + chr1.4:56725015-56725034 MS.gene91196:intron 25.0%
!! ATCTTTCACACAAATGTTTT+GGG + chr1.4:56724695-56724714 MS.gene91196:intron 25.0%
!! ATTGTTGTCATTGATTGAAT+TGG + chr1.4:56726625-56726644 MS.gene91196:intron 25.0%
!! TCTTTTGTGAATGATAATTG+AGG + chr1.4:56724739-56724758 MS.gene91196:intron 25.0%
!! TTGTGTAGAGTATTTCATAA+AGG + chr1.4:56726799-56726818 MS.gene91196:CDS 25.0%
!! TTTTCTTTATGCGGTTAAAA+CGG + chr1.4:56724479-56724498 MS.gene91196:intron 25.0%
!!! TTCAAACTTTTGTTGATTAC+AGG + chr1.4:56726765-56726784 MS.gene91196:intron 25.0%
AAAAATAAACGTACCTTAGG+TGG - chr1.4:56725949-56725968 None:intergenic 30.0%
AAGATGAGAAAGAAGCAAAT+TGG - chr1.4:56726918-56726937 None:intergenic 30.0%
AATTGACATTCACAAACACA+TGG + chr1.4:56723944-56723963 MS.gene91196:intron 30.0%
AGAAAGTCGTCATACAAAAT+AGG + chr1.4:56724852-56724871 MS.gene91196:intron 30.0%
ATAGTCTCATACATTTCTTG+TGG - chr1.4:56726853-56726872 None:intergenic 30.0%
ATTAGTCCTAAATGTGATGA+TGG + chr1.4:56727045-56727064 MS.gene91196:CDS 30.0%
CATGCATGAATAGAGATAAT+AGG - chr1.4:56725640-56725659 None:intergenic 30.0%
CATTTCTTGTGGACTTAATT+TGG - chr1.4:56726842-56726861 None:intergenic 30.0%
CTCATTTAAATGACAATGGT+GGG - chr1.4:56726950-56726969 None:intergenic 30.0%
GAACTACTATTATACCTTGA+TGG + chr1.4:56726279-56726298 MS.gene91196:intron 30.0%
GGTTCTCATTTAAATGACAA+TGG - chr1.4:56726954-56726973 None:intergenic 30.0%
GTGAAAGATCAAATGTTGTA+TGG - chr1.4:56724684-56724703 None:intergenic 30.0%
GTTCAGTTCTTCAATGATTA+AGG + chr1.4:56724241-56724260 MS.gene91196:intron 30.0%
TAAAACCTGTGGCATATTTA+CGG - chr1.4:56725741-56725760 None:intergenic 30.0%
TATGGAAAAACATGTGACTT+AGG - chr1.4:56725601-56725620 None:intergenic 30.0%
TCTCATTTAAATGACAATGG+TGG - chr1.4:56726951-56726970 None:intergenic 30.0%
! AACTCCTCTTTTTGTAAATG+GGG + chr1.4:56725266-56725285 MS.gene91196:intron 30.0%
! AAGATTTCAACTTGCTTCTT+AGG - chr1.4:56726178-56726197 None:intergenic 30.0%
! AAGTCACATGTTTTTCCATA+TGG + chr1.4:56725601-56725620 MS.gene91196:intron 30.0%
! CAAACTCCTCTTTTTGTAAA+TGG + chr1.4:56725264-56725283 MS.gene91196:intron 30.0%
! GATCTTTCACACAAATGTTT+TGG + chr1.4:56724694-56724713 MS.gene91196:intron 30.0%
! TTTTCAAACGTGACAATGAT+AGG + chr1.4:56725993-56726012 MS.gene91196:intron 30.0%
!! CTAAATGTGATGATGGATAT+GGG + chr1.4:56727052-56727071 MS.gene91196:CDS 30.0%
!! CTCTAGGTATTTTACTTTTG+TGG + chr1.4:56724505-56724524 MS.gene91196:intron 30.0%
!! TCTTCTTGCTTTTCTTTATG+CGG + chr1.4:56724470-56724489 MS.gene91196:intron 30.0%
!! TTTCAAGTTTCCAATTGAGA+CGG - chr1.4:56725389-56725408 None:intergenic 30.0%
!!! ACCTAAGCATGTTATTTTTG+GGG - chr1.4:56725358-56725377 None:intergenic 30.0%
!!! GACCTAAGCATGTTATTTTT+GGG - chr1.4:56725359-56725378 None:intergenic 30.0%
!!! GGTCAATTTTTAGTACCATA+TGG - chr1.4:56725619-56725638 None:intergenic 30.0%
!!! TGACCTAAGCATGTTATTTT+TGG - chr1.4:56725360-56725379 None:intergenic 30.0%
!!! TTAGCATCTTTTTGAGATAG+AGG + chr1.4:56726550-56726569 MS.gene91196:intron 30.0%
AAATAAGGTGAGAAAGTTGG+AGG + chr1.4:56726516-56726535 MS.gene91196:intron 35.0%
AATGTCCATTTAGTAGTGTG+AGG + chr1.4:56726221-56726240 MS.gene91196:intron 35.0%
ACAAATGAGGATGTTCTCAA+GGG + chr1.4:56723761-56723780 MS.gene91196:CDS 35.0%
ACCCCAAAAATAACATGCTT+AGG + chr1.4:56725354-56725373 MS.gene91196:intron 35.0%
AGGAAAACAATGTGTATGTG+AGG + chr1.4:56726570-56726589 MS.gene91196:intron 35.0%
ATCACACTCCCTTTATTATG+TGG - chr1.4:56726072-56726091 None:intergenic 35.0%
ATTAAACCCTCACAAACCAT+AGG - chr1.4:56726099-56726118 None:intergenic 35.0%
CAAATGGAATCAAAACAGGT+TGG + chr1.4:56725887-56725906 MS.gene91196:CDS 35.0%
CCATATCCATCATCACATTT+AGG - chr1.4:56727054-56727073 None:intergenic 35.0%
GAAAAACATGTGACTTAGGT+AGG - chr1.4:56725597-56725616 None:intergenic 35.0%
GACTTAGGTAGGTAAAACAA+GGG - chr1.4:56725586-56725605 None:intergenic 35.0%
GATTTGGAAGATCATCATGA+TGG + chr1.4:56727090-56727109 MS.gene91196:CDS 35.0%
GGAAAACTCTAGTGTTCTAT+AGG + chr1.4:56725854-56725873 MS.gene91196:CDS 35.0%
TACGGCAGAAAAAAACAACT+AGG - chr1.4:56724390-56724409 None:intergenic 35.0%
TAGGATAAAATCGAAAGCCA+GGG - chr1.4:56723700-56723719 None:intergenic 35.0%
TATAGGAATAGAGCTCCAAA+TGG + chr1.4:56725871-56725890 MS.gene91196:CDS 35.0%
TGACTTAGGTAGGTAAAACA+AGG - chr1.4:56725587-56725606 None:intergenic 35.0%
TGCTTTGCGAATATTCTGTA+AGG + chr1.4:56725090-56725109 MS.gene91196:intron 35.0%
TTATCCTAGTGATGAAGAGT+TGG + chr1.4:56723712-56723731 MS.gene91196:CDS 35.0%
TTCACCCCATTTACAAAAAG+AGG - chr1.4:56725273-56725292 None:intergenic 35.0%
! TTGTTGATTACAGGAAGACT+GGG + chr1.4:56726774-56726793 MS.gene91196:intron 35.0%
! TTTGTTGATTACAGGAAGAC+TGG + chr1.4:56726773-56726792 MS.gene91196:intron 35.0%
!! CCTAAATGTGATGATGGATA+TGG + chr1.4:56727051-56727070 MS.gene91196:CDS 35.0%
!! CGAGGTTGATAATAATAGCA+TGG + chr1.4:56727146-56727165 MS.gene91196:CDS 35.0%
!! TGATGGATATGGGTTTTTGT+GGG + chr1.4:56727062-56727081 MS.gene91196:CDS 35.0%
!!! ATGATGGATATGGGTTTTTG+TGG + chr1.4:56727061-56727080 MS.gene91196:CDS 35.0%
!!! CAACCTGTTTTGATTCCATT+TGG - chr1.4:56725889-56725908 None:intergenic 35.0%
!!! CACAGGTTTTAGAACCAATA+GGG + chr1.4:56725750-56725769 MS.gene91196:CDS 35.0%
!!! TGTGTATGTGAGGACTTTTT+TGG + chr1.4:56726580-56726599 MS.gene91196:intron 35.0%
AGGATAAAATCGAAAGCCAG+GGG - chr1.4:56723699-56723718 None:intergenic 40.0%
ATGCAAGTCAATTTCCTCCA+AGG - chr1.4:56723789-56723808 None:intergenic 40.0%
CACAAATGAGGATGTTCTCA+AGG + chr1.4:56723760-56723779 MS.gene91196:CDS 40.0%
CTAAACTCAACGCAACTGAA+TGG + chr1.4:56725695-56725714 MS.gene91196:CDS 40.0%
CTAGGATAAAATCGAAAGCC+AGG - chr1.4:56723701-56723720 None:intergenic 40.0%
GATCATGCATGAGTTTAGGT+TGG + chr1.4:56725909-56725928 MS.gene91196:CDS 40.0%
GCAAATTGGTTGTACCCAAT+TGG - chr1.4:56726904-56726923 None:intergenic 40.0%
GCTCCAAATGGAATCAAAAC+AGG + chr1.4:56725883-56725902 MS.gene91196:CDS 40.0%
GTATTGGAAAGCAACAGGAA+AGG + chr1.4:56725786-56725805 MS.gene91196:CDS 40.0%
GTTGGATCATGCATGAGTTT+AGG + chr1.4:56725905-56725924 MS.gene91196:CDS 40.0%
GTTTGATCCAATCACACATG+AGG + chr1.4:56725819-56725838 MS.gene91196:CDS 40.0%
TATATACCAGGAAGTTGCCA+AGG - chr1.4:56723821-56723840 None:intergenic 40.0%
TGGATCCTCACACTACTAAA+TGG - chr1.4:56726229-56726248 None:intergenic 40.0%
! ATATGGGTTTTTGTGGGACA+TGG + chr1.4:56727068-56727087 MS.gene91196:CDS 40.0%
! ATGAAGCCTATGGTTTGTGA+GGG + chr1.4:56726090-56726109 MS.gene91196:intron 40.0%
! GTCACTTTATCCGTCTCAAT+TGG + chr1.4:56725376-56725395 MS.gene91196:intron 40.0%
! GTTTTTGTGGGACATGGATT+TGG + chr1.4:56727074-56727093 MS.gene91196:CDS 40.0%
! TATTGTTTGGGACGCGTTTA+CGG - chr1.4:56724408-56724427 None:intergenic 40.0%
!! CCTATTGGTTCTAAAACCTG+TGG - chr1.4:56725752-56725771 None:intergenic 40.0%
!! TCAAAGCGCATTAGCTTTAG+TGG - chr1.4:56726249-56726268 None:intergenic 40.0%
!!! CCACAGGTTTTAGAACCAAT+AGG + chr1.4:56725749-56725768 MS.gene91196:CDS 40.0%
ACCAACCAAACCATGCCAAT+TGG + chr1.4:56726886-56726905 MS.gene91196:CDS 45.0%
ACCAATAGGGCAACAACATC+TGG + chr1.4:56725763-56725782 MS.gene91196:CDS 45.0%
AGCAACAGGAAAGGATCGAA+CGG + chr1.4:56725795-56725814 MS.gene91196:CDS 45.0%
AGGACCAACTCTTCATCACT+AGG - chr1.4:56723719-56723738 None:intergenic 45.0%
CACATGAGGTTGTAGGAATG+AGG + chr1.4:56725833-56725852 MS.gene91196:CDS 45.0%
CATGGAAGGAATGAGATTCG+AGG + chr1.4:56727128-56727147 MS.gene91196:CDS 45.0%
CATTCCTTCCATGTCTGATG+AGG - chr1.4:56727121-56727140 None:intergenic 45.0%
CCAACCAAACCATGCCAATT+GGG + chr1.4:56726887-56726906 MS.gene91196:CDS 45.0%
CCAATAGGGCAACAACATCT+GGG + chr1.4:56725764-56725783 MS.gene91196:CDS 45.0%
CCAATCACACATGAGGTTGT+AGG + chr1.4:56725826-56725845 MS.gene91196:CDS 45.0%
CCTACAACCTCATGTGTGAT+TGG - chr1.4:56725829-56725848 None:intergenic 45.0%
GAGAAAGTTGGAGGAGTGAT+TGG + chr1.4:56726525-56726544 MS.gene91196:intron 45.0%
GGATAAAATCGAAAGCCAGG+GGG - chr1.4:56723698-56723717 None:intergenic 45.0%
GTACCTTAGGTGGCATATGT+GGG - chr1.4:56725939-56725958 None:intergenic 45.0%
TACCTTAGGTGGCATATGTG+GGG - chr1.4:56725938-56725957 None:intergenic 45.0%
TGTACCCAATTGGCATGGTT+TGG - chr1.4:56726894-56726913 None:intergenic 45.0%
TTGGTTGTACCCAATTGGCA+TGG - chr1.4:56726899-56726918 None:intergenic 45.0%
! GATGAAGCCTATGGTTTGTG+AGG + chr1.4:56726089-56726108 MS.gene91196:intron 45.0%
! GGAAGATCATCATGATGGTG+TGG + chr1.4:56727095-56727114 MS.gene91196:CDS 45.0%
! GGGGTTTTGCAGTTACGTTA+CGG + chr1.4:56724205-56724224 MS.gene91196:intron 45.0%
!! ATGGTTTGGTTGGTTAGGGA+TGG - chr1.4:56726880-56726899 None:intergenic 45.0%
!! TCTGGGTATTGGAAAGCAAC+AGG + chr1.4:56725781-56725800 MS.gene91196:CDS 45.0%
!! TGGCATGGTTTGGTTGGTTA+GGG - chr1.4:56726884-56726903 None:intergenic 45.0%
!! TGGTTTGGTTGGTTAGGGAT+GGG - chr1.4:56726879-56726898 None:intergenic 45.0%
!! TTGGCATGGTTTGGTTGGTT+AGG - chr1.4:56726885-56726904 None:intergenic 45.0%
ACTTGCATACATGCGAGCCT+TGG + chr1.4:56723801-56723820 MS.gene91196:CDS 50.0%
CCCAGATGTTGTTGCCCTAT+TGG - chr1.4:56725767-56725786 None:intergenic 50.0%
CGTACCTTAGGTGGCATATG+TGG - chr1.4:56725940-56725959 None:intergenic 50.0%
CGTGACCGTAAATATGCCAC+AGG + chr1.4:56725733-56725752 MS.gene91196:CDS 50.0%
GCGGTTAAAACGGCTTCTCT+AGG + chr1.4:56724489-56724508 MS.gene91196:intron 50.0%
GGGCAACAACATCTGGGTAT+TGG + chr1.4:56725770-56725789 MS.gene91196:CDS 50.0%
! AGGGAGTGTGATGAAGCCTA+TGG + chr1.4:56726080-56726099 MS.gene91196:intron 50.0%
! GGTTTGGTTGGTTAGGGATG+GGG - chr1.4:56726878-56726897 None:intergenic 50.0%
!! CCCAATTGGCATGGTTTGGT+TGG - chr1.4:56726890-56726909 None:intergenic 50.0%
!! GGATGTTCTCAAGGGTACCT+TGG + chr1.4:56723769-56723788 MS.gene91196:CDS 50.0%
!! TGTTCTCAAGGGTACCTTGG+AGG + chr1.4:56723772-56723791 MS.gene91196:CDS 50.0%
GACCCCACATATGCCACCTA+AGG + chr1.4:56725933-56725952 MS.gene91196:CDS 55.0%
GTGGCCTCATCAGACATGGA+AGG + chr1.4:56727114-56727133 MS.gene91196:CDS 55.0%
TGGTGTGGCCTCATCAGACA+TGG + chr1.4:56727110-56727129 MS.gene91196:CDS 55.0%
TGCGAGCCTTGGCAACTTCC+TGG + chr1.4:56723812-56723831 MS.gene91196:CDS 60.0%
! GTCGGTGCTTCACTTCCCCC+TGG + chr1.4:56723680-56723699 MS.gene91196:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 56723665 56727179 56723665 ID=MS.gene91196
chr1.4 mRNA 56723665 56727179 56723665 ID=MS.gene91196.t1;Parent=MS.gene91196
chr1.4 exon 56723665 56723833 56723665 ID=MS.gene91196.t1.exon1;Parent=MS.gene91196.t1
chr1.4 CDS 56723665 56723833 56723665 ID=cds.MS.gene91196.t1;Parent=MS.gene91196.t1
chr1.4 exon 56725689 56725954 56725689 ID=MS.gene91196.t1.exon2;Parent=MS.gene91196.t1
chr1.4 CDS 56725689 56725954 56725689 ID=cds.MS.gene91196.t1;Parent=MS.gene91196.t1
chr1.4 exon 56726787 56726908 56726787 ID=MS.gene91196.t1.exon3;Parent=MS.gene91196.t1
chr1.4 CDS 56726787 56726908 56726787 ID=cds.MS.gene91196.t1;Parent=MS.gene91196.t1
chr1.4 exon 56727032 56727179 56727032 ID=MS.gene91196.t1.exon4;Parent=MS.gene91196.t1
chr1.4 CDS 56727032 56727179 56727032 ID=cds.MS.gene91196.t1;Parent=MS.gene91196.t1
Gene Sequence

>MS.gene91196

ATGGGTCTTAGAGATGTCGGTGCTTCACTTCCCCCTGGCTTTCGATTTTATCCTAGTGATGAAGAGTTGGTCCTTCATTACCTTTACAAAAAAATCACAAATGAGGATGTTCTCAAGGGTACCTTGGAGGAAATTGACTTGCATACATGCGAGCCTTGGCAACTTCCTGGTATATATTATATTTATCATCATTTTCACTTGATCTCTTTAATTTTAGTTTCATTAATTAGTTGTCTTTGTTTTCTATTGCTTATTTAACCATATATTAATTCTTTGGTTAATTGACATTCACAAACACATGGTGTACAACATCATTAATTAACTTGGAAGAAATATTTTTAACATCTTTAGTTATGTTTTGTTTGAGCCTTATATTTATTTATGAGTTGAAACTTGAAATATATTTGCCTTTTTAAAAGAAGGAAACTTTGGAAAAAAAAGAAGAAGAAATAATTAAAGGTGCAAGTTCTTGCATATAACAGAAAGCATATGAGATCATGAGAATGAGAGTGCAATAAAATAAAAGAGAAAATTGGTTATGGGGTTTTGCAGTTACGTTACGGTTAATAGTTTATTGTTCAGTTCTTCAATGATTAAGGCTATTAATGGAAACTTCTTCATCAATATACTTGTCTCTTCCAATAAATAATTTTTTTATATAATATGGTACTATTTGATTATGCCGTTTTACATAATTGCTTTTGTCTTTTGTGAAGTTTGTACCTAGTTGTTTTTTTCTGCCGTAAACGCGTCCCAAACAATATTATGATCTCTATGAAAATCAAACTATGAAGATTCTAAATATTCTTCTTGCTTTTCTTTATGCGGTTAAAACGGCTTCTCTAGGTATTTTACTTTTGTGGTTAATATTCTATCCTTTCACTTTCATTTGATTAATTATTACATGTTTTTTCAAACTTACTATTTTTCTCTATGTTTATCTATCTATTTATCTTTTATTTTCTGATTCCTGCATGTATTTAAGTCTATATTAAATACACATGCACATGACTGTTCCATACAACATTTGATCTTTCACACAAATGTTTTGGGCTTTTGCATTCATTTGCTACTTCTTTTGTGAATGATAATTGAGGTTACTTCCATACCTTGTCATAAATTGTAACATAAAATATATAACTAGAAATTATGTTAATATATATTCACTCAATATATAAACTTAAAAAAGAAAGTCGTCATACAAAATAGGAATTTAAAGTGTATACACTATCAAAGCAAAATAGGAATTTAAAGTGTATACAAAATAGGAATTTAGTGTAAATTATTGTTTTGCTTTGATAGTCTACCATTAAAGTCTACAAAATATACACAATTATTTTTAAAAAAATTATCGTTATTGATGGTAAAATTGGACGTTATTCTCTCAGTAATTTTACATAGATAATCAACATTATCTTTTAAGCATGCTTTGCGAATATTCTGTAAGGTGCATAATGCTTGTATCTTCTTCAACTAGTTTCTGAATTTAGACACAATCATGAAATTAATCAAACATTAGCTTATGGAAATATTTCTAGCTAGTTCTAAGATAATTTGTGCTTATTTTAGATACCAATAAGCAATTTTTCATGTTAAAAACAAACTCCTCTTTTTGTAAATGGGGTGAAACTGAAAAATACAAAGAGAACGGAATTACACATATATAGCAAATCACGTTTGAAAATTGAAACCCCAAAAATAACATGCTTAGGTCACTTTATCCGTCTCAATTGGAAACTTGAAAATTACATGTCATTTATGAACTAATTGACACGCTAATTAACGTGATCATCATATTCATACATAAACAAAACCAAATTATTTTTGTCATTATTGTCATAATTATTCTAATACGTACTTAGAAACAATTAATTATTTGCACACAATGATATTAGATTATATTCTTATCTATCTAACACCCTTGTTTTACCTACCTAAGTCACATGTTTTTCCATATGGTACTAAAAATTGACCTATTATCTCTATTCATGCATGCGTGCTTTTGTTTTTTTTTATTTATTCAGAGGTGGCTAAACTCAACGCAACTGAATGGTACTTCTTCAGCTTTCGTGACCGTAAATATGCCACAGGTTTTAGAACCAATAGGGCAACAACATCTGGGTATTGGAAAGCAACAGGAAAGGATCGAACGGTGTTTGATCCAATCACACATGAGGTTGTAGGAATGAGGAAAACTCTAGTGTTCTATAGGAATAGAGCTCCAAATGGAATCAAAACAGGTTGGATCATGCATGAGTTTAGGTTGGAGACCCCACATATGCCACCTAAGGTACGTTTATTTTTACTTTTTCTTTACCTTTCAATCAATTTTCAAACGTGACAATGATAGGTTATATCACGATTATTATTATCTTTAAGTTTACGCGTTTGCATAATGTAATTGCCACATAATAAAGGGAGTGTGATGAAGCCTATGGTTTGTGAGGGTTTAATAAGAAGAGTCATTTATATGTGTAGTTTTTATTAGGTATAAATAAAAAAATTGGCTACCTAAGAAGCAAGTTGAAATCTTTTTTATTTTTCAAAAGAAATTAAAATGTCCATTTAGTAGTGTGAGGATCCACTAAAGCTAATGCGCTTTGATGAGAATTGAGAACTACTATTATACCTTGATGGAGATATTTTATCTTACTAGATCTAATGATTTAATTAATTAATTAAACATTAGTTCCATTTCAAAAAACATTAAAACATTAATTAAAAATGATTGACTAATTATAAGTATAAAAAACATCAATGTAGAATAAATTCAAGTTTTCTTACAAGAATCTCTAATTAAGTTTTTTTAATAAACTTGACGTGGAAACAAAATTCAAGAGCTAGCTATTTAAAATAAGGTGAGAAAGTTGGAGGAGTGATTGGATTTAGCATCTTTTTGAGATAGAGGAAAACAATGTGTATGTGAGGACTTTTTTGGTCCAAATCTTATTAAGAGATTTATTGTTGTCATTGATTGAATTGGATAGAATAGAATATTTCATAAGTGGAAAAGAAATGATTCTCACGTATTTTAGGTGTGATGTTAAAGCTTCTTTAAAAATCTAGTTATTTTGGTTTCACATTTATTTTTGCTAATTAGTTCAAACTTTTGTTGATTACAGGAAGACTGGGTTTTGTGTAGAGTATTTCATAAAGGCAAGACAGAAAATAATGCCAAATTAAGTCCACAAGAAATGTATGAGACTATAGCCCCATCCCTAACCAACCAAACCATGCCAATTGGGTACAACCAATTTGCTTCTTTCTCATCTTCAATGACAACCCACCATTGTCATTTAAATGAGAACCAAAATAATTCTTTGATGAATTTTCTTCAATTTTCTAAGGAAACAAACAACAATTGTAGTAGTATTACTCAAATTAGTCCTAAATGTGATGATGGATATGGGTTTTTGTGGGACATGGATTTGGAAGATCATCATGATGGTGTGGCCTCATCAGACATGGAAGGAATGAGATTCGAGGTTGATAATAATAGCATGGTCTTGTTATAA
Protein sequence

>MS.gene91196.t1

MGLRDVGASLPPGFRFYPSDEELVLHYLYKKITNEDVLKGTLEEIDLHTCEPWQLPEVAKLNATEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVFDPITHEVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKGKTENNAKLSPQEMYETIAPSLTNQTMPIGSITQISPKCDDGYGFLWDMDLEDHHDGVASSDMEGMRFEVDNNSMVLL