Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91243.t1 | XP_013464832.1 | 92.1 | 355 | 22 | 1 | 1 | 355 | 1 | 349 | 7.20E-173 | 616.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91243.t1 | Q700D9 | 66.2 | 71 | 24 | 0 | 89 | 159 | 15 | 85 | 2.5e-20 | 101.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91243.t1 | A0A072VAU2 | 92.1 | 355 | 22 | 1 | 1 | 355 | 1 | 349 | 5.2e-173 | 616.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene91243.t1 | TF | GARP-G2-like |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91243.t1 | MTR_2g084230 | 92.432 | 370 | 22 | 1 | 1 | 370 | 1 | 364 | 0.0 | 681 |
MS.gene91243.t1 | MTR_2g084230 | 93.631 | 314 | 14 | 1 | 1 | 314 | 1 | 308 | 0.0 | 584 |
MS.gene91243.t1 | MTR_8g086410 | 63.768 | 138 | 44 | 2 | 32 | 167 | 46 | 179 | 1.84e-43 | 156 |
MS.gene91243.t1 | MTR_8g086410 | 63.768 | 138 | 44 | 2 | 32 | 167 | 48 | 181 | 1.89e-43 | 156 |
MS.gene91243.t1 | MTR_2g016220 | 55.063 | 158 | 56 | 5 | 35 | 189 | 37 | 182 | 1.43e-41 | 150 |
MS.gene91243.t1 | MTR_2g016220 | 55.063 | 158 | 56 | 5 | 35 | 189 | 37 | 182 | 1.78e-41 | 150 |
MS.gene91243.t1 | MTR_8g086410 | 60.690 | 145 | 44 | 3 | 32 | 167 | 48 | 188 | 7.82e-41 | 149 |
MS.gene91243.t1 | MTR_7g069660 | 56.618 | 136 | 57 | 2 | 52 | 186 | 27 | 161 | 5.24e-40 | 145 |
MS.gene91243.t1 | MTR_2g016220 | 53.704 | 162 | 56 | 6 | 35 | 189 | 37 | 186 | 2.17e-39 | 144 |
MS.gene91243.t1 | MTR_2g023580 | 58.065 | 93 | 39 | 0 | 75 | 167 | 33 | 125 | 9.32e-31 | 117 |
MS.gene91243.t1 | MTR_0223s0040 | 68.421 | 76 | 24 | 0 | 84 | 159 | 5 | 80 | 5.11e-30 | 117 |
MS.gene91243.t1 | MTR_1g112370 | 58.889 | 90 | 34 | 2 | 83 | 169 | 8 | 97 | 2.66e-29 | 116 |
MS.gene91243.t1 | MTR_3g450310 | 54.430 | 79 | 30 | 1 | 75 | 153 | 3 | 75 | 1.11e-21 | 92.4 |
MS.gene91243.t1 | MTR_1g021520 | 64.789 | 71 | 22 | 2 | 89 | 158 | 120 | 188 | 1.37e-21 | 94.0 |
MS.gene91243.t1 | MTR_6g071625 | 70.690 | 58 | 17 | 0 | 96 | 153 | 201 | 258 | 6.87e-21 | 93.2 |
MS.gene91243.t1 | MTR_3g064840 | 70.690 | 58 | 17 | 0 | 96 | 153 | 273 | 330 | 1.48e-20 | 93.2 |
MS.gene91243.t1 | MTR_5g029470 | 68.966 | 58 | 18 | 0 | 96 | 153 | 218 | 275 | 2.06e-20 | 92.4 |
MS.gene91243.t1 | MTR_8g066310 | 63.934 | 61 | 22 | 0 | 96 | 156 | 172 | 232 | 4.61e-20 | 90.9 |
MS.gene91243.t1 | MTR_7g115530 | 64.286 | 56 | 20 | 0 | 98 | 153 | 219 | 274 | 3.93e-18 | 84.3 |
MS.gene91243.t1 | MTR_7g098250 | 66.071 | 56 | 19 | 0 | 98 | 153 | 263 | 318 | 4.54e-18 | 85.9 |
MS.gene91243.t1 | MTR_7g093030 | 52.326 | 86 | 34 | 2 | 93 | 177 | 208 | 287 | 6.21e-18 | 83.6 |
MS.gene91243.t1 | MTR_7g115530 | 64.286 | 56 | 20 | 0 | 98 | 153 | 219 | 274 | 8.51e-18 | 84.0 |
MS.gene91243.t1 | MTR_7g093030 | 47.059 | 102 | 40 | 3 | 93 | 193 | 208 | 296 | 1.02e-17 | 84.3 |
MS.gene91243.t1 | MTR_7g115530 | 64.286 | 56 | 20 | 0 | 98 | 153 | 219 | 274 | 1.03e-17 | 84.7 |
MS.gene91243.t1 | MTR_1g080330 | 64.286 | 56 | 20 | 0 | 98 | 153 | 176 | 231 | 1.04e-17 | 82.8 |
MS.gene91243.t1 | MTR_1g080330 | 59.701 | 67 | 26 | 1 | 87 | 153 | 166 | 231 | 1.13e-17 | 84.3 |
MS.gene91243.t1 | MTR_7g115530 | 64.286 | 56 | 20 | 0 | 98 | 153 | 219 | 274 | 1.24e-17 | 83.6 |
MS.gene91243.t1 | MTR_7g088070 | 66.667 | 60 | 19 | 1 | 99 | 157 | 52 | 111 | 3.56e-17 | 81.3 |
MS.gene91243.t1 | MTR_5g027440 | 60.345 | 58 | 23 | 0 | 93 | 150 | 21 | 78 | 3.64e-17 | 81.3 |
MS.gene91243.t1 | MTR_7g088070 | 66.667 | 60 | 19 | 1 | 99 | 157 | 52 | 111 | 3.76e-17 | 81.3 |
MS.gene91243.t1 | MTR_1g053835 | 50.000 | 96 | 39 | 3 | 70 | 164 | 239 | 326 | 3.87e-17 | 82.8 |
MS.gene91243.t1 | MTR_1g090670 | 60.714 | 56 | 22 | 0 | 98 | 153 | 45 | 100 | 2.46e-16 | 79.0 |
MS.gene91243.t1 | MTR_7g115530 | 62.500 | 56 | 21 | 0 | 98 | 153 | 219 | 274 | 3.03e-16 | 78.6 |
MS.gene91243.t1 | MTR_7g115530 | 65.385 | 52 | 18 | 0 | 98 | 149 | 219 | 270 | 3.30e-16 | 78.6 |
MS.gene91243.t1 | MTR_2g027800 | 60.714 | 56 | 22 | 0 | 98 | 153 | 40 | 95 | 5.38e-16 | 78.6 |
MS.gene91243.t1 | MTR_2g027800 | 62.264 | 53 | 20 | 0 | 98 | 150 | 40 | 92 | 8.15e-16 | 77.8 |
MS.gene91243.t1 | MTR_2g027860 | 65.455 | 55 | 19 | 0 | 99 | 153 | 51 | 105 | 1.03e-15 | 77.8 |
MS.gene91243.t1 | MTR_6g032990 | 60.377 | 53 | 21 | 0 | 98 | 150 | 43 | 95 | 1.79e-15 | 77.8 |
MS.gene91243.t1 | MTR_2g086450 | 57.143 | 56 | 24 | 0 | 98 | 153 | 46 | 101 | 1.84e-15 | 77.4 |
MS.gene91243.t1 | MTR_1g053830 | 48.000 | 75 | 38 | 1 | 99 | 172 | 20 | 94 | 3.50e-15 | 71.2 |
MS.gene91243.t1 | MTR_6g444980 | 55.357 | 56 | 25 | 0 | 98 | 153 | 36 | 91 | 1.84e-14 | 74.3 |
MS.gene91243.t1 | MTR_6g444980 | 55.357 | 56 | 25 | 0 | 98 | 153 | 36 | 91 | 1.90e-14 | 74.3 |
MS.gene91243.t1 | MTR_5g041350 | 50.943 | 53 | 26 | 0 | 98 | 150 | 16 | 68 | 8.03e-14 | 72.4 |
MS.gene91243.t1 | MTR_4g081710 | 51.786 | 56 | 27 | 0 | 98 | 153 | 18 | 73 | 1.24e-13 | 71.6 |
MS.gene91243.t1 | MTR_7g068600 | 61.017 | 59 | 20 | 1 | 99 | 154 | 15 | 73 | 1.86e-13 | 69.7 |
MS.gene91243.t1 | MTR_1g053800 | 58.491 | 53 | 22 | 0 | 99 | 151 | 179 | 231 | 1.87e-13 | 70.9 |
MS.gene91243.t1 | MTR_7g093010 | 58.491 | 53 | 22 | 0 | 99 | 151 | 215 | 267 | 9.21e-12 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91243.t1 | AT2G38300 | 72.093 | 86 | 24 | 0 | 77 | 162 | 34 | 119 | 3.16e-36 | 135 |
MS.gene91243.t1 | AT2G42660 | 65.957 | 94 | 21 | 2 | 89 | 177 | 42 | 129 | 9.40e-34 | 126 |
MS.gene91243.t1 | AT4G04605 | 57.009 | 107 | 38 | 2 | 89 | 187 | 6 | 112 | 5.87e-32 | 120 |
MS.gene91243.t1 | AT2G40260 | 65.625 | 96 | 24 | 1 | 70 | 156 | 46 | 141 | 8.51e-32 | 124 |
MS.gene91243.t1 | AT2G02060 | 65.882 | 85 | 22 | 2 | 66 | 150 | 5 | 82 | 2.45e-27 | 108 |
MS.gene91243.t1 | AT2G02060 | 65.882 | 85 | 22 | 2 | 66 | 150 | 5 | 82 | 2.45e-27 | 108 |
MS.gene91243.t1 | AT1G14600 | 66.197 | 71 | 24 | 0 | 89 | 159 | 15 | 85 | 3.18e-26 | 106 |
MS.gene91243.t1 | AT4G04555 | 61.644 | 73 | 28 | 0 | 85 | 157 | 2 | 74 | 4.45e-25 | 98.6 |
MS.gene91243.t1 | AT4G04580 | 60.870 | 69 | 27 | 0 | 89 | 157 | 6 | 74 | 1.27e-23 | 96.7 |
MS.gene91243.t1 | AT5G42630 | 66.667 | 63 | 21 | 0 | 96 | 158 | 104 | 166 | 1.89e-22 | 95.1 |
MS.gene91243.t1 | AT5G42630 | 66.667 | 63 | 21 | 0 | 96 | 158 | 104 | 166 | 3.64e-22 | 95.5 |
MS.gene91243.t1 | AT5G16560 | 70.690 | 58 | 17 | 0 | 96 | 153 | 218 | 275 | 1.53e-20 | 92.8 |
MS.gene91243.t1 | AT1G32240 | 68.966 | 58 | 18 | 0 | 96 | 153 | 212 | 269 | 1.76e-20 | 92.0 |
MS.gene91243.t1 | AT4G17695 | 62.319 | 69 | 24 | 1 | 88 | 156 | 157 | 223 | 1.86e-20 | 91.3 |
MS.gene91243.t1 | AT1G32240 | 68.966 | 58 | 18 | 0 | 96 | 153 | 212 | 269 | 2.30e-20 | 92.0 |
MS.gene91243.t1 | AT5G29000 | 36.420 | 162 | 86 | 6 | 5 | 153 | 130 | 287 | 8.17e-19 | 86.7 |
MS.gene91243.t1 | AT5G29000 | 36.250 | 160 | 89 | 5 | 5 | 153 | 130 | 287 | 2.22e-18 | 86.7 |
MS.gene91243.t1 | AT5G29000 | 36.250 | 160 | 89 | 5 | 5 | 153 | 87 | 244 | 2.68e-18 | 85.9 |
MS.gene91243.t1 | AT5G29000 | 36.250 | 160 | 89 | 5 | 5 | 153 | 87 | 244 | 2.68e-18 | 85.9 |
MS.gene91243.t1 | AT5G45580 | 43.000 | 100 | 52 | 1 | 93 | 192 | 3 | 97 | 6.45e-18 | 83.2 |
MS.gene91243.t1 | AT5G45580 | 43.000 | 100 | 52 | 1 | 93 | 192 | 19 | 113 | 1.02e-17 | 82.8 |
MS.gene91243.t1 | AT2G06020 | 48.780 | 82 | 39 | 1 | 80 | 158 | 66 | 147 | 7.13e-17 | 80.9 |
MS.gene91243.t1 | AT4G28610 | 45.977 | 87 | 45 | 1 | 99 | 183 | 227 | 313 | 7.14e-17 | 82.0 |
MS.gene91243.t1 | AT3G04450 | 60.000 | 55 | 22 | 0 | 99 | 153 | 240 | 294 | 2.04e-16 | 79.7 |
MS.gene91243.t1 | AT3G04450 | 60.000 | 55 | 22 | 0 | 99 | 153 | 200 | 254 | 3.17e-16 | 80.1 |
MS.gene91243.t1 | AT3G04450 | 60.000 | 55 | 22 | 0 | 99 | 153 | 200 | 254 | 3.17e-16 | 80.1 |
MS.gene91243.t1 | AT3G04450 | 60.000 | 55 | 22 | 0 | 99 | 153 | 240 | 294 | 3.46e-16 | 80.1 |
MS.gene91243.t1 | AT3G12730 | 36.885 | 122 | 66 | 2 | 98 | 219 | 24 | 134 | 3.66e-16 | 77.8 |
MS.gene91243.t1 | AT2G01060 | 55.844 | 77 | 21 | 2 | 99 | 162 | 17 | 93 | 5.44e-16 | 78.2 |
MS.gene91243.t1 | AT3G13040 | 65.455 | 55 | 19 | 0 | 99 | 153 | 243 | 297 | 1.80e-15 | 78.2 |
MS.gene91243.t1 | AT3G13040 | 65.455 | 55 | 19 | 0 | 99 | 153 | 243 | 297 | 1.80e-15 | 78.2 |
MS.gene91243.t1 | AT3G13040 | 65.455 | 55 | 19 | 0 | 99 | 153 | 243 | 297 | 1.80e-15 | 78.2 |
MS.gene91243.t1 | AT5G06800 | 58.333 | 60 | 24 | 1 | 99 | 157 | 194 | 253 | 2.01e-15 | 76.3 |
MS.gene91243.t1 | AT5G18240 | 42.308 | 104 | 57 | 2 | 65 | 167 | 13 | 114 | 2.24e-15 | 77.4 |
MS.gene91243.t1 | AT5G18240 | 42.308 | 104 | 57 | 2 | 65 | 167 | 13 | 114 | 2.24e-15 | 77.4 |
MS.gene91243.t1 | AT5G18240 | 42.308 | 104 | 57 | 2 | 65 | 167 | 13 | 114 | 2.53e-15 | 77.4 |
MS.gene91243.t1 | AT5G18240 | 42.308 | 104 | 57 | 2 | 65 | 167 | 13 | 114 | 2.75e-15 | 77.0 |
MS.gene91243.t1 | AT5G18240 | 42.308 | 104 | 57 | 2 | 65 | 167 | 13 | 114 | 2.75e-15 | 77.0 |
MS.gene91243.t1 | AT4G13640 | 58.491 | 53 | 22 | 0 | 98 | 150 | 38 | 90 | 2.75e-15 | 76.3 |
MS.gene91243.t1 | AT4G13640 | 58.491 | 53 | 22 | 0 | 98 | 150 | 38 | 90 | 2.87e-15 | 75.9 |
MS.gene91243.t1 | AT3G24120 | 56.604 | 53 | 23 | 0 | 98 | 150 | 42 | 94 | 5.36e-15 | 75.5 |
MS.gene91243.t1 | AT3G24120 | 56.604 | 53 | 23 | 0 | 98 | 150 | 42 | 94 | 5.44e-15 | 75.1 |
MS.gene91243.t1 | AT3G04030 | 54.237 | 59 | 26 | 1 | 98 | 155 | 46 | 104 | 8.02e-15 | 75.9 |
MS.gene91243.t1 | AT5G06800 | 52.174 | 69 | 33 | 0 | 99 | 167 | 194 | 262 | 8.33e-15 | 75.5 |
MS.gene91243.t1 | AT3G04030 | 54.237 | 59 | 26 | 1 | 98 | 155 | 46 | 104 | 9.14e-15 | 75.5 |
MS.gene91243.t1 | AT5G06800 | 58.333 | 60 | 24 | 1 | 99 | 157 | 194 | 253 | 9.76e-15 | 75.5 |
MS.gene91243.t1 | AT1G79430 | 55.357 | 56 | 25 | 0 | 98 | 153 | 35 | 90 | 1.65e-14 | 74.7 |
MS.gene91243.t1 | AT2G20400 | 61.818 | 55 | 21 | 0 | 99 | 153 | 233 | 287 | 3.64e-14 | 73.9 |
MS.gene91243.t1 | AT2G20400 | 61.818 | 55 | 21 | 0 | 99 | 153 | 233 | 287 | 3.69e-14 | 73.9 |
MS.gene91243.t1 | AT1G69580 | 53.571 | 56 | 26 | 0 | 98 | 153 | 35 | 90 | 6.05e-14 | 72.8 |
MS.gene91243.t1 | AT1G69580 | 53.571 | 56 | 26 | 0 | 98 | 153 | 35 | 90 | 6.15e-14 | 72.8 |
MS.gene91243.t1 | AT3G04030 | 52.542 | 59 | 26 | 2 | 98 | 155 | 46 | 103 | 2.08e-12 | 68.6 |
MS.gene91243.t1 | AT4G37180 | 50.847 | 59 | 29 | 0 | 92 | 150 | 205 | 263 | 8.50e-11 | 63.2 |
MS.gene91243.t1 | AT3G16857 | 43.158 | 95 | 49 | 3 | 60 | 150 | 126 | 219 | 9.65e-11 | 63.9 |
Find 56 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTACTTGGCTAGACCTAAT+AGG | 0.308735 | 2.3:+13910426 | None:intergenic |
TTCACTGAATACACAATGTT+TGG | 0.328197 | 2.3:-13910285 | MS.gene91243:CDS |
ACATGTGAAGAGTCATTTAC+AGG | 0.347064 | 2.3:-13911539 | MS.gene91243:intron |
GCAAGGGAGGCATCACATTA+TGG | 0.352066 | 2.3:-13911088 | MS.gene91243:CDS |
CGGGTAGTAATTGACTTACT+TGG | 0.374141 | 2.3:+13910412 | None:intergenic |
CATCAACTGGAGAACTAACT+TGG | 0.377692 | 2.3:+13911585 | None:intergenic |
TTCACATCTATTTGATGTAA+AGG | 0.385780 | 2.3:-13910475 | MS.gene91243:CDS |
TTAAAGCTCATGACACTTCA+AGG | 0.388453 | 2.3:-13910966 | MS.gene91243:intron |
TATGATGGTTGTTTCAATAG+AGG | 0.404012 | 2.3:+13910997 | None:intergenic |
GTCCTCTCACATTCATCAAC+TGG | 0.411306 | 2.3:+13911572 | None:intergenic |
GAAATAATATTGCACCTATT+AGG | 0.414171 | 2.3:-13910440 | MS.gene91243:CDS |
CTTCGAATCGGCAAGGAGGC+AGG | 0.428221 | 2.3:+13912806 | None:intergenic |
TGAAAGAGAAAGTATCGTAT+TGG | 0.437322 | 2.3:+13909056 | None:intergenic |
AATAATAATTCTAGTGAAGA+AGG | 0.443311 | 2.3:-13912650 | MS.gene91243:CDS |
TTATCTCAAGGGGATGATAA+TGG | 0.444178 | 2.3:-13910378 | MS.gene91243:CDS |
GTGCATGCTGTTGAGAGGCT+TGG | 0.454830 | 2.3:-13912542 | MS.gene91243:CDS |
CATCACATTATGGATATGTA+TGG | 0.462878 | 2.3:-13911078 | MS.gene91243:CDS |
TTTCAACACCAAAGTGTCCT+TGG | 0.465491 | 2.3:+13911043 | None:intergenic |
AACGAAGAAGCCGTGGATGA+TGG | 0.466556 | 2.3:-13912761 | MS.gene91243:CDS |
AGTGAAAGTAGTAGCGGTAT+CGG | 0.469081 | 2.3:-13912836 | MS.gene91243:CDS |
GCTTTAATTTCATTATATGA+TGG | 0.474362 | 2.3:+13910982 | None:intergenic |
AATTCTAGTGAAGAAGGAAA+AGG | 0.475804 | 2.3:-13912644 | MS.gene91243:CDS |
CTCGACTTAGCTTTAGCTCT+AGG | 0.486541 | 2.3:+13909100 | None:intergenic |
TTCAATGTCCAAGGACACTT+TGG | 0.487141 | 2.3:-13911051 | MS.gene91243:CDS |
TTTGTAGATTTCACGAGAGT+GGG | 0.487235 | 2.3:-13910554 | MS.gene91243:intron |
CATGCTGTTGAGAGGCTTGG+AGG | 0.487742 | 2.3:-13912539 | MS.gene91243:CDS |
TGATACTTGAGTTTGATGTA+TGG | 0.492822 | 2.3:+13909185 | None:intergenic |
ATAATTGATAGAACTAGAAA+AGG | 0.502223 | 2.3:+13910332 | None:intergenic |
ATTCTAGTGAAGAAGGAAAA+GGG | 0.515576 | 2.3:-13912643 | MS.gene91243:CDS |
ATTGTGTATTCAGTGAAGAT+AGG | 0.520662 | 2.3:+13910291 | None:intergenic |
AGGAAAAGGGCGTGGAAGTA+CGG | 0.529396 | 2.3:-13912630 | MS.gene91243:CDS |
ATACACAATGTTTGGTTCTG+AGG | 0.536912 | 2.3:-13910277 | MS.gene91243:intron |
GAACTAGAAAAGGTGCTCCA+TGG | 0.547694 | 2.3:+13910342 | None:intergenic |
TCACTCTTGACATCTTTGCT+AGG | 0.551418 | 2.3:+13912854 | None:intergenic |
TCAGAAGTCCAACGAAGCCT+AGG | 0.559435 | 2.3:+13912581 | None:intergenic |
AATGAGATATCATCACAAGA+AGG | 0.560760 | 2.3:-13912686 | MS.gene91243:CDS |
TATGGAAGATTCAATGTCCA+AGG | 0.583731 | 2.3:-13911060 | MS.gene91243:CDS |
ATGAGATATCATCACAAGAA+GGG | 0.586610 | 2.3:-13912685 | MS.gene91243:CDS |
AGTGAAGAAGGAAAAGGGCG+TGG | 0.587852 | 2.3:-13912638 | MS.gene91243:CDS |
ATCAACTGGAGAACTAACTT+GGG | 0.593327 | 2.3:+13911586 | None:intergenic |
AAAATAGAGCAATGCAAGGG+AGG | 0.596790 | 2.3:-13911101 | MS.gene91243:CDS |
CTTCAGATCAAGTTCAGTGT+GGG | 0.604465 | 2.3:-13910508 | MS.gene91243:CDS |
TTGTTGCTTATTTCACCACA+AGG | 0.610333 | 2.3:+13912707 | None:intergenic |
ATGCTGTTGAGAGGCTTGGA+GGG | 0.612873 | 2.3:-13912538 | MS.gene91243:CDS |
CGATTTAAACGAAGAAGCCG+TGG | 0.613136 | 2.3:-13912768 | MS.gene91243:CDS |
GTCAAGAGTGAAAGTAGTAG+CGG | 0.626941 | 2.3:-13912842 | MS.gene91243:CDS |
CTCCAGTTGATGAATGTGAG+AGG | 0.629384 | 2.3:-13911574 | MS.gene91243:CDS |
ATGATCATCTCCATCATCCA+CGG | 0.632945 | 2.3:+13912751 | None:intergenic |
TGTTTCAATAGAGGAGACGA+TGG | 0.646679 | 2.3:+13911006 | None:intergenic |
GTTTCAATAGAGGAGACGAT+GGG | 0.648257 | 2.3:+13911007 | None:intergenic |
AAGCTTGATGAGTCAGGCCA+AGG | 0.656023 | 2.3:-13911251 | MS.gene91243:intron |
TGTTGCTTATTTCACCACAA+GGG | 0.657001 | 2.3:+13912708 | None:intergenic |
GTGATAAGTGAAGGCCCTTG+TGG | 0.681709 | 2.3:-13912722 | MS.gene91243:CDS |
TCTTCAGATCAAGTTCAGTG+TGG | 0.702689 | 2.3:-13910509 | MS.gene91243:CDS |
CATGTGATAGTGATAAGTGA+AGG | 0.715293 | 2.3:-13912731 | MS.gene91243:CDS |
GTACGGTTAGACAATATGTG+AGG | 0.722782 | 2.3:-13912613 | MS.gene91243:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACAATATTATTGATATATAT+AGG | - | chr2.3:13910294-13910313 | MS.gene91243:CDS | 10.0% |
!! | CATATATACTTAATTATATA+GGG | - | chr2.3:13912297-13912316 | MS.gene91243:intron | 10.0% |
!! | TCATATATACTTAATTATAT+AGG | - | chr2.3:13912296-13912315 | MS.gene91243:intron | 10.0% |
!!! | AATTTTATTTTATTTCTTCA+AGG | + | chr2.3:13910991-13911010 | None:intergenic | 10.0% |
!!! | TTAATTATGATTTTTTTTTG+AGG | - | chr2.3:13910616-13910635 | MS.gene91243:intron | 10.0% |
!! | AAAAATGAGATATATTAACA+CGG | - | chr2.3:13912025-13912044 | MS.gene91243:intron | 15.0% |
!! | AAATTTCACTTAAAAACTTA+AGG | + | chr2.3:13911664-13911683 | None:intergenic | 15.0% |
!! | AATTTCGTTTAAAAACTTAT+AGG | + | chr2.3:13912276-13912295 | None:intergenic | 15.0% |
!! | TTAAAAAAAATGAGATAACT+TGG | + | chr2.3:13912218-13912237 | None:intergenic | 15.0% |
!! | TTAATTGTCAATTTATTAGT+AGG | - | chr2.3:13909790-13909809 | MS.gene91243:intron | 15.0% |
!!! | AAATAGAAACATTTAAAACA+TGG | - | chr2.3:13911297-13911316 | MS.gene91243:intron | 15.0% |
!!! | GTTATCTCATTTTTTTTAAA+AGG | - | chr2.3:13912219-13912238 | MS.gene91243:intron | 15.0% |
!!! | TCAAAAGATAACATATTTTA+GGG | + | chr2.3:13911961-13911980 | None:intergenic | 15.0% |
!!! | TTCAAAAGATAACATATTTT+AGG | + | chr2.3:13911962-13911981 | None:intergenic | 15.0% |
!!! | TTCATTTATTTAGTTTAGTT+AGG | + | chr2.3:13911761-13911780 | None:intergenic | 15.0% |
!! | AAATTTGCATAGTGTAAATA+TGG | - | chr2.3:13909434-13909453 | MS.gene91243:intron | 20.0% |
!! | AATAATAATTCTAGTGAAGA+AGG | - | chr2.3:13909260-13909279 | MS.gene91243:intron | 20.0% |
!! | ACATTAAATGATTGAATGTT+GGG | + | chr2.3:13911107-13911126 | None:intergenic | 20.0% |
!! | ATAATTGATAGAACTAGAAA+AGG | + | chr2.3:13911581-13911600 | None:intergenic | 20.0% |
!! | ATAGATATACTTGACTATAT+AGG | - | chr2.3:13911691-13911710 | MS.gene91243:intron | 20.0% |
!! | TAAAATAAAATTCCATGATG+TGG | - | chr2.3:13910999-13911018 | MS.gene91243:CDS | 20.0% |
!! | TAGATATACTTGACTATATA+GGG | - | chr2.3:13911692-13911711 | MS.gene91243:intron | 20.0% |
!! | TTACTTGTGCAAAATATATA+AGG | + | chr2.3:13912141-13912160 | None:intergenic | 20.0% |
!! | TTAGCAAAATAATGTATTAC+AGG | - | chr2.3:13910711-13910730 | MS.gene91243:intron | 20.0% |
!! | TTGCAATATGTACAAATAAT+TGG | - | chr2.3:13912382-13912401 | MS.gene91243:intron | 20.0% |
!!! | CTTCAAAAGATTACATATTT+TGG | + | chr2.3:13912621-13912640 | None:intergenic | 20.0% |
!!! | GCTTTAATTTCATTATATGA+TGG | + | chr2.3:13910931-13910950 | None:intergenic | 20.0% |
!!! | TCTGAAATATTTATTTACCT+TGG | + | chr2.3:13910679-13910698 | None:intergenic | 20.0% |
!!! | TGTTGTTTCTTTTGAATTTT+AGG | - | chr2.3:13912672-13912691 | MS.gene91243:CDS | 20.0% |
!!! | TTATTTTGCTAACAAGATTA+AGG | + | chr2.3:13910703-13910722 | None:intergenic | 20.0% |
! | AATCAAAAAGCTTATCTCAA+GGG | - | chr2.3:13911521-13911540 | MS.gene91243:intron | 25.0% |
! | ACTTAGAATCGTAAAACATT+AGG | + | chr2.3:13909617-13909636 | None:intergenic | 25.0% |
! | ATATATCATACCCAAACTTT+AGG | + | chr2.3:13911084-13911103 | None:intergenic | 25.0% |
! | ATTGTTGAATCTTTATGACA+TGG | - | chr2.3:13910021-13910040 | MS.gene91243:intron | 25.0% |
! | CATATTATAGCATATGAGTT+GGG | + | chr2.3:13909877-13909896 | None:intergenic | 25.0% |
! | GAAATAATATTGCACCTATT+AGG | - | chr2.3:13911470-13911489 | MS.gene91243:intron | 25.0% |
! | GACAATTAACGTTTATCTAT+AGG | + | chr2.3:13909779-13909798 | None:intergenic | 25.0% |
! | GACATTAAATGATTGAATGT+TGG | + | chr2.3:13911108-13911127 | None:intergenic | 25.0% |
! | GTAAGAAAGATAGAATACAA+AGG | + | chr2.3:13910591-13910610 | None:intergenic | 25.0% |
! | GTTCTATCATAAACCATATT+TGG | + | chr2.3:13910148-13910167 | None:intergenic | 25.0% |
! | TATATCATACCCAAACTTTA+GGG | + | chr2.3:13911083-13911102 | None:intergenic | 25.0% |
! | TTATGAGTTCTGTATTTGTT+GGG | - | chr2.3:13909507-13909526 | MS.gene91243:intron | 25.0% |
! | TTCACATCTATTTGATGTAA+AGG | - | chr2.3:13911435-13911454 | MS.gene91243:intron | 25.0% |
! | TTCATGTCATATTTACTGTA+GGG | - | chr2.3:13911874-13911893 | MS.gene91243:intron | 25.0% |
! | TTCGTGTCATATTTATTGTA+AGG | - | chr2.3:13912529-13912548 | MS.gene91243:intron | 25.0% |
! | TTCGTTTAAAAACTTATAGG+AGG | + | chr2.3:13912273-13912292 | None:intergenic | 25.0% |
! | TTTAAAAACTTATAGGAGGA+AGG | + | chr2.3:13912269-13912288 | None:intergenic | 25.0% |
!! | AGATAAAACCATCTTTAGAA+GGG | + | chr2.3:13912598-13912617 | None:intergenic | 25.0% |
!! | ATATATTTTGCACAAGTAAG+TGG | - | chr2.3:13912142-13912161 | MS.gene91243:intron | 25.0% |
!! | TAAGGTAATATTGACTGATT+TGG | + | chr2.3:13912123-13912142 | None:intergenic | 25.0% |
!! | TAATGTTTTACGATTCTAAG+TGG | - | chr2.3:13909616-13909635 | MS.gene91243:intron | 25.0% |
!! | TATAATATGGACTACATCTT+CGG | - | chr2.3:13909888-13909907 | MS.gene91243:intron | 25.0% |
!!! | AGGGATAAAACATTTTTAGA+AGG | + | chr2.3:13911942-13911961 | None:intergenic | 25.0% |
!!! | CTCATTCAACTTTTTTAACT+GGG | + | chr2.3:13912770-13912789 | None:intergenic | 25.0% |
!!! | GATTTGGTTGTAATTTTGTT+TGG | + | chr2.3:13912107-13912126 | None:intergenic | 25.0% |
!!! | GGGATAAAACATTTTTAGAA+GGG | + | chr2.3:13911941-13911960 | None:intergenic | 25.0% |
!!! | TCTCATTCAACTTTTTTAAC+TGG | + | chr2.3:13912771-13912790 | None:intergenic | 25.0% |
!!! | TTGAGATAAGCTTTTTGATT+CGG | + | chr2.3:13911521-13911540 | None:intergenic | 25.0% |
AAGGAAAAAGACATTCCAAA+AGG | + | chr2.3:13910572-13910591 | None:intergenic | 30.0% | |
AATGAGATATCATCACAAGA+AGG | - | chr2.3:13909224-13909243 | MS.gene91243:intron | 30.0% | |
AATTCTAGTGAAGAAGGAAA+AGG | - | chr2.3:13909266-13909285 | MS.gene91243:intron | 30.0% | |
ACAAAAATAGAGCAATGCAA+GGG | - | chr2.3:13910806-13910825 | MS.gene91243:intron | 30.0% | |
AGGAAAAAGACATTCCAAAA+GGG | + | chr2.3:13910571-13910590 | None:intergenic | 30.0% | |
ATAAAATTCCATGATGTGGT+TGG | - | chr2.3:13911003-13911022 | MS.gene91243:CDS | 30.0% | |
ATATGACATGAACCATAGTT+AGG | + | chr2.3:13911866-13911885 | None:intergenic | 30.0% | |
ATCAAAAAGCTTATCTCAAG+GGG | - | chr2.3:13911522-13911541 | MS.gene91243:intron | 30.0% | |
ATGAGATATCATCACAAGAA+GGG | - | chr2.3:13909225-13909244 | MS.gene91243:intron | 30.0% | |
ATTATGAGTGTGCTAAACAT+TGG | - | chr2.3:13909562-13909581 | MS.gene91243:intron | 30.0% | |
ATTCTAGTGAAGAAGGAAAA+GGG | - | chr2.3:13909267-13909286 | MS.gene91243:intron | 30.0% | |
ATTGTGTATTCAGTGAAGAT+AGG | + | chr2.3:13911622-13911641 | None:intergenic | 30.0% | |
CATCACATTATGGATATGTA+TGG | - | chr2.3:13910832-13910851 | MS.gene91243:intron | 30.0% | |
CATTCACACTATTTCGTATT+TGG | + | chr2.3:13910048-13910067 | None:intergenic | 30.0% | |
CATTTGACAAAACCTAACTA+TGG | - | chr2.3:13911851-13911870 | MS.gene91243:intron | 30.0% | |
CCAACTCATATGCTATAATA+TGG | - | chr2.3:13909875-13909894 | MS.gene91243:intron | 30.0% | |
CCATATTATAGCATATGAGT+TGG | + | chr2.3:13909878-13909897 | None:intergenic | 30.0% | |
CTTATGAGTTCTGTATTTGT+TGG | - | chr2.3:13909506-13909525 | MS.gene91243:intron | 30.0% | |
GAATCAAAAAGCTTATCTCA+AGG | - | chr2.3:13911520-13911539 | MS.gene91243:intron | 30.0% | |
GAGATAAAACCATCTTTAGA+AGG | + | chr2.3:13912599-13912618 | None:intergenic | 30.0% | |
GATCTCTGGATTATATCTTT+AGG | - | chr2.3:13909713-13909732 | MS.gene91243:intron | 30.0% | |
GCATAAGCTTTCTTAATCAT+TGG | + | chr2.3:13911804-13911823 | None:intergenic | 30.0% | |
GTTCATGTCATATTTACTGT+AGG | - | chr2.3:13911873-13911892 | MS.gene91243:intron | 30.0% | |
TCCTCTCTCATAAAAAAAAG+AGG | - | chr2.3:13912349-13912368 | MS.gene91243:intron | 30.0% | |
TGAACAACACTTAGAAATTG+AGG | - | chr2.3:13910430-13910449 | MS.gene91243:CDS | 30.0% | |
TGATACTTGAGTTTGATGTA+TGG | + | chr2.3:13912728-13912747 | None:intergenic | 30.0% | |
TGATTAACTGTGTTTGTAGT+GGG | - | chr2.3:13910470-13910489 | MS.gene91243:CDS | 30.0% | |
TTCACTGAATACACAATGTT+TGG | - | chr2.3:13911625-13911644 | MS.gene91243:intron | 30.0% | |
TTCCCTAATATCATTACCTT+TGG | - | chr2.3:13909468-13909487 | MS.gene91243:intron | 30.0% | |
TTGATTAACTGTGTTTGTAG+TGG | - | chr2.3:13910469-13910488 | MS.gene91243:CDS | 30.0% | |
! | AGTAGTTCTTTTTGATGTCA+TGG | - | chr2.3:13909737-13909756 | MS.gene91243:intron | 30.0% |
! | GATTCAACAATGTTTTACGT+TGG | + | chr2.3:13910012-13910031 | None:intergenic | 30.0% |
! | TATGATGGTTGTTTCAATAG+AGG | + | chr2.3:13910916-13910935 | None:intergenic | 30.0% |
! | TGACATTTTCGTGATTGTTT+TGG | + | chr2.3:13912080-13912099 | None:intergenic | 30.0% |
!! | TAGTACCCTAAAGTTTTGTA+GGG | + | chr2.3:13911173-13911192 | None:intergenic | 30.0% |
!! | TGAAAGAGAAAGTATCGTAT+TGG | + | chr2.3:13912857-13912876 | None:intergenic | 30.0% |
!! | TGAGATAAGCTTTTTGATTC+GGG | + | chr2.3:13911520-13911539 | None:intergenic | 30.0% |
!! | TTAGTACCCTAAAGTTTTGT+AGG | + | chr2.3:13911174-13911193 | None:intergenic | 30.0% |
!!! | TCCTCTTTTTTTTATGAGAG+AGG | + | chr2.3:13912353-13912372 | None:intergenic | 30.0% |
!!! | TTGCATTGCTCTATTTTTGT+GGG | + | chr2.3:13910806-13910825 | None:intergenic | 30.0% |
ACATGTGAAGAGTCATTTAC+AGG | - | chr2.3:13910371-13910390 | MS.gene91243:CDS | 35.0% | |
ACCATACCCTACAAAACTTT+AGG | - | chr2.3:13911164-13911183 | MS.gene91243:intron | 35.0% | |
ACCTTGTGCTGTAACAATTA+CGG | + | chr2.3:13912054-13912073 | None:intergenic | 35.0% | |
ACTTCTGAACCCTAAAGTTT+GGG | - | chr2.3:13911071-13911090 | MS.gene91243:CDS | 35.0% | |
AGTAAAAAGCTTGATGAGTC+AGG | - | chr2.3:13910653-13910672 | MS.gene91243:intron | 35.0% | |
AGTACAATGTCAAATGAGCA+AGG | - | chr2.3:13910106-13910125 | MS.gene91243:intron | 35.0% | |
ATATTTGGATCCAACACAAG+CGG | + | chr2.3:13910133-13910152 | None:intergenic | 35.0% | |
ATCAACTGGAGAACTAACTT+GGG | + | chr2.3:13910327-13910346 | None:intergenic | 35.0% | |
CACAAAAATAGAGCAATGCA+AGG | - | chr2.3:13910805-13910824 | MS.gene91243:intron | 35.0% | |
CCATACCCTACAAAACTTTA+GGG | - | chr2.3:13911165-13911184 | MS.gene91243:intron | 35.0% | |
CGCCAAAGGTAATGATATTA+GGG | + | chr2.3:13909473-13909492 | None:intergenic | 35.0% | |
GTACAATGTCAAATGAGCAA+GGG | - | chr2.3:13910107-13910126 | MS.gene91243:intron | 35.0% | |
TACGAAATAGTGTGAATGCT+AGG | - | chr2.3:13910050-13910069 | MS.gene91243:intron | 35.0% | |
TATGGAAGATTCAATGTCCA+AGG | - | chr2.3:13910850-13910869 | MS.gene91243:intron | 35.0% | |
TCCAGAGATCAATATTGTTG+AGG | + | chr2.3:13909703-13909722 | None:intergenic | 35.0% | |
TCCTCAACAATATTGATCTC+TGG | - | chr2.3:13909699-13909718 | MS.gene91243:intron | 35.0% | |
TCGCCAAAGGTAATGATATT+AGG | + | chr2.3:13909474-13909493 | None:intergenic | 35.0% | |
TGTATATTCCAACCACATCA+TGG | + | chr2.3:13911014-13911033 | None:intergenic | 35.0% | |
TTAAAGCTCATGACACTTCA+AGG | - | chr2.3:13910944-13910963 | MS.gene91243:intron | 35.0% | |
TTATCTCAAGGGGATGATAA+TGG | - | chr2.3:13911532-13911551 | MS.gene91243:intron | 35.0% | |
TTTGTAGATTTCACGAGAGT+GGG | - | chr2.3:13911356-13911375 | MS.gene91243:intron | 35.0% | |
TTTGTGTAATTTCTCCGTCA+TGG | - | chr2.3:13909943-13909962 | MS.gene91243:intron | 35.0% | |
! | AAAACCATCTTTAGAAGGGA+TGG | + | chr2.3:13912594-13912613 | None:intergenic | 35.0% |
! | AACGAACGTTTTCTTCGAAT+CGG | + | chr2.3:13909119-13909138 | None:intergenic | 35.0% |
! | ACTCATCAAGCTTTTTACTC+CGG | + | chr2.3:13910652-13910671 | None:intergenic | 35.0% |
! | AGTTTAGAAACATGCCCTTT+TGG | - | chr2.3:13910554-13910573 | MS.gene91243:intron | 35.0% |
! | ATATGAGTTGGGACGTTAAA+AGG | + | chr2.3:13909866-13909885 | None:intergenic | 35.0% |
! | ATGGTGCAAAACATTTTCCA+TGG | - | chr2.3:13911551-13911570 | MS.gene91243:CDS | 35.0% |
! | CATGTGATAGTGATAAGTGA+AGG | - | chr2.3:13909179-13909198 | MS.gene91243:CDS | 35.0% |
! | GATGTAGTATTTTCCTCTCT+TGG | - | chr2.3:13909640-13909659 | MS.gene91243:intron | 35.0% |
! | TGTTGCTTATTTCACCACAA+GGG | + | chr2.3:13909205-13909224 | None:intergenic | 35.0% |
! | TTGTTGCTTATTTCACCACA+AGG | + | chr2.3:13909206-13909225 | None:intergenic | 35.0% |
! | TTTTGTAGATTTCACGAGAG+TGG | - | chr2.3:13911355-13911374 | MS.gene91243:intron | 35.0% |
!! | ATACACAATGTTTGGTTCTG+AGG | - | chr2.3:13911633-13911652 | MS.gene91243:intron | 35.0% |
!!! | CTTGCATTGCTCTATTTTTG+TGG | + | chr2.3:13910807-13910826 | None:intergenic | 35.0% |
!!! | TTTTTGAGGTTCAGATGTAC+CGG | - | chr2.3:13910630-13910649 | MS.gene91243:intron | 35.0% |
AAAATAGAGCAATGCAAGGG+AGG | - | chr2.3:13910809-13910828 | MS.gene91243:intron | 40.0% | |
ACAAACGAGAAACAGTCGAT+AGG | + | chr2.3:13909928-13909947 | None:intergenic | 40.0% | |
ACCGTAATTGTTACAGCACA+AGG | - | chr2.3:13912050-13912069 | MS.gene91243:intron | 40.0% | |
ACTATATAGGGCCAACTCTA+TGG | - | chr2.3:13911704-13911723 | MS.gene91243:intron | 40.0% | |
AGTGAAAGTAGTAGCGGTAT+CGG | - | chr2.3:13909074-13909093 | MS.gene91243:CDS | 40.0% | |
ATCCTTGTGTACCATAGAGT+TGG | + | chr2.3:13911718-13911737 | None:intergenic | 40.0% | |
ATGATCATCTCCATCATCCA+CGG | + | chr2.3:13909162-13909181 | None:intergenic | 40.0% | |
ATGTGAGGTCAAAAATGCCT+AGG | - | chr2.3:13909312-13909331 | MS.gene91243:intron | 40.0% | |
CAAACGAGAAACAGTCGATA+GGG | + | chr2.3:13909927-13909946 | None:intergenic | 40.0% | |
CACTTCTGAACCCTAAAGTT+TGG | - | chr2.3:13911070-13911089 | MS.gene91243:CDS | 40.0% | |
CATCAACTGGAGAACTAACT+TGG | + | chr2.3:13910328-13910347 | None:intergenic | 40.0% | |
CTTACTTGGCTAGACCTAAT+AGG | + | chr2.3:13911487-13911506 | None:intergenic | 40.0% | |
CTTCAGATCAAGTTCAGTGT+GGG | - | chr2.3:13911402-13911421 | MS.gene91243:intron | 40.0% | |
GCTTGTGTTGGATCCAAATA+TGG | - | chr2.3:13910132-13910151 | MS.gene91243:intron | 40.0% | |
GTACGGTTAGACAATATGTG+AGG | - | chr2.3:13909297-13909316 | MS.gene91243:intron | 40.0% | |
GTCAAGAGTGAAAGTAGTAG+CGG | - | chr2.3:13909068-13909087 | MS.gene91243:CDS | 40.0% | |
GTCGATAGGGATCCAAAAAT+AGG | + | chr2.3:13909914-13909933 | None:intergenic | 40.0% | |
GTTTCAATAGAGGAGACGAT+GGG | + | chr2.3:13910906-13910925 | None:intergenic | 40.0% | |
TAAAAGGAGAGGGTTGTGTT+AGG | - | chr2.3:13909978-13909997 | MS.gene91243:intron | 40.0% | |
TCACTCTTGACATCTTTGCT+AGG | + | chr2.3:13909059-13909078 | None:intergenic | 40.0% | |
TCTTCAGATCAAGTTCAGTG+TGG | - | chr2.3:13911401-13911420 | MS.gene91243:intron | 40.0% | |
TGTTTCAATAGAGGAGACGA+TGG | + | chr2.3:13910907-13910926 | None:intergenic | 40.0% | |
TTCAATGTCCAAGGACACTT+TGG | - | chr2.3:13910859-13910878 | MS.gene91243:intron | 40.0% | |
! | CAACTAAGCCTTATCCCATT+AGG | + | chr2.3:13910206-13910225 | None:intergenic | 40.0% |
! | CGGGTAGTAATTGACTTACT+TGG | + | chr2.3:13911501-13911520 | None:intergenic | 40.0% |
! | CTACATCTTCGGCCTATTTT+TGG | - | chr2.3:13909899-13909918 | MS.gene91243:intron | 40.0% |
! | CTTTCCATCCCTTCTAAAGA+TGG | - | chr2.3:13912587-13912606 | MS.gene91243:CDS | 40.0% |
! | GTATTTTCCTCTCTTGGTCT+TGG | - | chr2.3:13909646-13909665 | MS.gene91243:intron | 40.0% |
! | GTTGTTTCATTTGTCGCCAA+AGG | + | chr2.3:13909487-13909506 | None:intergenic | 40.0% |
! | TAAGCCTTATCCCATTAGGT+GGG | + | chr2.3:13910202-13910221 | None:intergenic | 40.0% |
! | TTTCAACACCAAAGTGTCCT+TGG | + | chr2.3:13910870-13910889 | None:intergenic | 40.0% |
!! | CCCTAAAGTTTTGTAGGGTA+TGG | + | chr2.3:13911168-13911187 | None:intergenic | 40.0% |
ACATAATCAACCCCCTGAAC+AGG | - | chr2.3:13909830-13909849 | MS.gene91243:intron | 45.0% | |
AGTATCAAGACCTGTTCAGG+GGG | + | chr2.3:13909843-13909862 | None:intergenic | 45.0% | |
CAAAAATGCCTAGGCTTCGT+TGG | - | chr2.3:13909321-13909340 | MS.gene91243:intron | 45.0% | |
CAATGTTCCAAGACCAAGAG+AGG | + | chr2.3:13909656-13909675 | None:intergenic | 45.0% | |
CGATTTAAACGAAGAAGCCG+TGG | - | chr2.3:13909142-13909161 | MS.gene91243:CDS | 45.0% | |
GAGTATCAAGACCTGTTCAG+GGG | + | chr2.3:13909844-13909863 | None:intergenic | 45.0% | |
GGACAACTCAATAGTGCACA+AGG | - | chr2.3:13912318-13912337 | MS.gene91243:intron | 45.0% | |
GTCCTCTCACATTCATCAAC+TGG | + | chr2.3:13910341-13910360 | None:intergenic | 45.0% | |
! | AAGCCTTATCCCATTAGGTG+GGG | + | chr2.3:13910201-13910220 | None:intergenic | 45.0% |
! | ACAACCCTCTCCTTTTACCT+GGG | + | chr2.3:13909975-13909994 | None:intergenic | 45.0% |
! | ACGTTTTCTTCGAATCGGCA+AGG | + | chr2.3:13909114-13909133 | None:intergenic | 45.0% |
! | CTAAGCCTTATCCCATTAGG+TGG | + | chr2.3:13910203-13910222 | None:intergenic | 45.0% |
! | CTTTTGTGCATGCTGTTGAG+AGG | - | chr2.3:13909363-13909382 | MS.gene91243:intron | 45.0% |
! | GGAGTATCAAGACCTGTTCA+GGG | + | chr2.3:13909845-13909864 | None:intergenic | 45.0% |
! | TGTTCAGGGGGTTGATTATG+TGG | + | chr2.3:13909831-13909850 | None:intergenic | 45.0% |
! | TTTTCTTCGAATCGGCAAGG+AGG | + | chr2.3:13909111-13909130 | None:intergenic | 45.0% |
!! | AGGAGTATCAAGACCTGTTC+AGG | + | chr2.3:13909846-13909865 | None:intergenic | 45.0% |
!! | CTCCAGTTGATGAATGTGAG+AGG | - | chr2.3:13910336-13910355 | MS.gene91243:CDS | 45.0% |
!! | CTCGACTTAGCTTTAGCTCT+AGG | + | chr2.3:13912813-13912832 | None:intergenic | 45.0% |
!! | CTCTCTTGGTCTTGGAACAT+TGG | - | chr2.3:13909654-13909673 | MS.gene91243:intron | 45.0% |
!! | GAACTAGAAAAGGTGCTCCA+TGG | + | chr2.3:13911571-13911590 | None:intergenic | 45.0% |
AACGAAGAAGCCGTGGATGA+TGG | - | chr2.3:13909149-13909168 | MS.gene91243:CDS | 50.0% | |
AAGCTTGATGAGTCAGGCCA+AGG | - | chr2.3:13910659-13910678 | MS.gene91243:intron | 50.0% | |
AGTGAAGAAGGAAAAGGGCG+TGG | - | chr2.3:13909272-13909291 | MS.gene91243:intron | 50.0% | |
ATGCTGTTGAGAGGCTTGGA+GGG | - | chr2.3:13909372-13909391 | MS.gene91243:intron | 50.0% | |
ATGGACCAAGCCCAGGTAAA+AGG | - | chr2.3:13909962-13909981 | MS.gene91243:intron | 50.0% | |
ATGTAACCGACCCCACCTAA+TGG | - | chr2.3:13910188-13910207 | MS.gene91243:intron | 50.0% | |
ATTAGGTGGGGTCGGTTACA+TGG | + | chr2.3:13910189-13910208 | None:intergenic | 50.0% | |
CAAGCCCAGGTAAAAGGAGA+GGG | - | chr2.3:13909968-13909987 | MS.gene91243:intron | 50.0% | |
CTTATCCCATTAGGTGGGGT+CGG | + | chr2.3:13910197-13910216 | None:intergenic | 50.0% | |
GGCCAACTCTATGGTACACA+AGG | - | chr2.3:13911713-13911732 | MS.gene91243:intron | 50.0% | |
GTGAATGCTAGGTCGTTGCT+CGG | - | chr2.3:13910061-13910080 | MS.gene91243:intron | 50.0% | |
GTGATAAGTGAAGGCCCTTG+TGG | - | chr2.3:13909188-13909207 | MS.gene91243:CDS | 50.0% | |
TCAGAAGTCCAACGAAGCCT+AGG | + | chr2.3:13909332-13909351 | None:intergenic | 50.0% | |
TGTAACCGACCCCACCTAAT+GGG | - | chr2.3:13910189-13910208 | MS.gene91243:intron | 50.0% | |
! | AGGAAAAGGGCGTGGAAGTA+CGG | - | chr2.3:13909280-13909299 | MS.gene91243:intron | 50.0% |
! | CACAACCCTCTCCTTTTACC+TGG | + | chr2.3:13909976-13909995 | None:intergenic | 50.0% |
!! | GCAAGGGAGGCATCACATTA+TGG | - | chr2.3:13910822-13910841 | MS.gene91243:intron | 50.0% |
CATGCTGTTGAGAGGCTTGG+AGG | - | chr2.3:13909371-13909390 | MS.gene91243:intron | 55.0% | |
CCAAGCCCAGGTAAAAGGAG+AGG | - | chr2.3:13909967-13909986 | MS.gene91243:intron | 55.0% | |
CGACCCCACCTAATGGGATA+AGG | - | chr2.3:13910195-13910214 | MS.gene91243:intron | 55.0% | |
GTGCATGCTGTTGAGAGGCT+TGG | - | chr2.3:13909368-13909387 | MS.gene91243:intron | 55.0% | |
! | CCTCTCCTTTTACCTGGGCT+TGG | + | chr2.3:13909970-13909989 | None:intergenic | 55.0% |
! | TACCTGGGCTTGGTCCATGA+CGG | + | chr2.3:13909960-13909979 | None:intergenic | 55.0% |
CTTCGAATCGGCAAGGAGGC+AGG | + | chr2.3:13909107-13909126 | None:intergenic | 60.0% | |
TGAGCAAGGGCCGCTTGTGT+TGG | - | chr2.3:13910120-13910139 | MS.gene91243:intron | 60.0% | |
CTCCGTCATGGACCAAGCCC+AGG | - | chr2.3:13909955-13909974 | MS.gene91243:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 13909038 | 13912894 | 13909038 | ID=MS.gene91243 |
chr2.3 | mRNA | 13909038 | 13912894 | 13909038 | ID=MS.gene91243.t1;Parent=MS.gene91243 |
chr2.3 | exon | 13912531 | 13912894 | 13912531 | ID=MS.gene91243.t1.exon1;Parent=MS.gene91243.t1 |
chr2.3 | CDS | 13912531 | 13912894 | 13912531 | ID=cds.MS.gene91243.t1;Parent=MS.gene91243.t1 |
chr2.3 | exon | 13911540 | 13911616 | 13911540 | ID=MS.gene91243.t1.exon2;Parent=MS.gene91243.t1 |
chr2.3 | CDS | 13911540 | 13911616 | 13911540 | ID=cds.MS.gene91243.t1;Parent=MS.gene91243.t1 |
chr2.3 | exon | 13911252 | 13911288 | 13911252 | ID=MS.gene91243.t1.exon3;Parent=MS.gene91243.t1 |
chr2.3 | CDS | 13911252 | 13911288 | 13911252 | ID=cds.MS.gene91243.t1;Parent=MS.gene91243.t1 |
chr2.3 | exon | 13910967 | 13911135 | 13910967 | ID=MS.gene91243.t1.exon4;Parent=MS.gene91243.t1 |
chr2.3 | CDS | 13910967 | 13911135 | 13910967 | ID=cds.MS.gene91243.t1;Parent=MS.gene91243.t1 |
chr2.3 | exon | 13910278 | 13910569 | 13910278 | ID=MS.gene91243.t1.exon5;Parent=MS.gene91243.t1 |
chr2.3 | CDS | 13910278 | 13910569 | 13910278 | ID=cds.MS.gene91243.t1;Parent=MS.gene91243.t1 |
chr2.3 | exon | 13909038 | 13909238 | 13909038 | ID=MS.gene91243.t1.exon6;Parent=MS.gene91243.t1 |
chr2.3 | CDS | 13909038 | 13909238 | 13909038 | ID=cds.MS.gene91243.t1;Parent=MS.gene91243.t1 |
Gene Sequence |
Protein sequence |