Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91331.t1 | XP_024630916.1 | 62.3 | 644 | 36 | 3 | 146 | 582 | 1 | 644 | 1.10E-203 | 719.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91331.t1 | Q9SWG3 | 28.7 | 279 | 189 | 3 | 300 | 574 | 379 | 651 | 9.0e-26 | 120.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91331.t1 | A0A3Q7Y261 | 51.5 | 645 | 103 | 4 | 145 | 582 | 2 | 643 | 3.1e-165 | 591.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene91331.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91331.t1 | MTR_0402s0040 | 51.810 | 442 | 106 | 7 | 154 | 566 | 1 | 364 | 6.60e-126 | 382 |
MS.gene91331.t1 | MTR_7g113010 | 56.641 | 256 | 47 | 6 | 87 | 279 | 314 | 568 | 7.08e-77 | 257 |
MS.gene91331.t1 | MTR_1g057920 | 77.236 | 123 | 3 | 1 | 146 | 243 | 1 | 123 | 1.27e-57 | 191 |
MS.gene91331.t1 | MTR_3g045700 | 78.409 | 88 | 19 | 0 | 1 | 88 | 256 | 343 | 7.81e-40 | 150 |
MS.gene91331.t1 | MTR_5g015480 | 48.824 | 170 | 56 | 3 | 141 | 283 | 20 | 185 | 9.93e-38 | 141 |
MS.gene91331.t1 | MTR_6g017200 | 50.327 | 153 | 44 | 2 | 121 | 248 | 7 | 152 | 1.47e-37 | 137 |
MS.gene91331.t1 | MTR_1g100280 | 67.778 | 90 | 27 | 1 | 1 | 88 | 241 | 330 | 7.24e-33 | 130 |
MS.gene91331.t1 | MTR_1g050985 | 91.667 | 60 | 5 | 0 | 224 | 283 | 39 | 98 | 1.36e-31 | 118 |
MS.gene91331.t1 | MTR_1g109340 | 64.773 | 88 | 31 | 0 | 1 | 88 | 261 | 348 | 1.39e-31 | 126 |
MS.gene91331.t1 | MTR_2g070590 | 52.991 | 117 | 30 | 1 | 165 | 256 | 3 | 119 | 1.09e-29 | 114 |
MS.gene91331.t1 | MTR_7g083950 | 63.636 | 88 | 32 | 0 | 1 | 88 | 338 | 425 | 4.27e-28 | 118 |
MS.gene91331.t1 | MTR_1g109520 | 58.947 | 95 | 29 | 2 | 1 | 88 | 79 | 170 | 3.62e-27 | 108 |
MS.gene91331.t1 | MTR_4g133320 | 57.609 | 92 | 29 | 3 | 1 | 88 | 216 | 301 | 1.58e-18 | 87.4 |
MS.gene91331.t1 | MTR_4g133490 | 56.522 | 92 | 30 | 3 | 1 | 88 | 256 | 341 | 4.58e-18 | 86.7 |
MS.gene91331.t1 | MTR_0137s0040 | 38.028 | 142 | 57 | 4 | 146 | 285 | 1 | 113 | 6.17e-18 | 80.5 |
MS.gene91331.t1 | MTR_3g006180 | 46.939 | 98 | 46 | 3 | 1 | 95 | 245 | 339 | 1.82e-17 | 84.7 |
MS.gene91331.t1 | MTR_3g006120 | 47.917 | 96 | 44 | 3 | 1 | 93 | 258 | 350 | 6.87e-17 | 83.2 |
MS.gene91331.t1 | MTR_0291s0060 | 69.388 | 49 | 15 | 0 | 156 | 204 | 12 | 60 | 6.46e-16 | 73.9 |
MS.gene91331.t1 | MTR_3g006010 | 47.423 | 97 | 43 | 3 | 1 | 93 | 375 | 467 | 7.12e-16 | 81.3 |
MS.gene91331.t1 | MTR_3g006100 | 48.352 | 91 | 41 | 3 | 1 | 88 | 258 | 345 | 2.76e-15 | 78.2 |
MS.gene91331.t1 | MTR_6g091850 | 40.206 | 97 | 46 | 3 | 1 | 88 | 1 | 94 | 9.25e-15 | 70.9 |
MS.gene91331.t1 | MTR_1g086270 | 41.053 | 95 | 44 | 1 | 287 | 381 | 21 | 103 | 1.19e-14 | 70.9 |
MS.gene91331.t1 | MTR_6g091830 | 42.268 | 97 | 44 | 3 | 1 | 88 | 355 | 448 | 3.08e-13 | 72.8 |
MS.gene91331.t1 | MTR_6g088340 | 42.268 | 97 | 44 | 3 | 1 | 88 | 333 | 426 | 5.06e-13 | 72.0 |
MS.gene91331.t1 | MTR_6g011110 | 43.299 | 97 | 40 | 3 | 1 | 86 | 176 | 268 | 6.33e-13 | 70.1 |
MS.gene91331.t1 | MTR_6g092140 | 41.237 | 97 | 45 | 3 | 1 | 88 | 355 | 448 | 7.19e-13 | 71.6 |
MS.gene91331.t1 | MTR_1g019850 | 29.282 | 181 | 96 | 3 | 125 | 287 | 30 | 196 | 7.36e-13 | 69.3 |
MS.gene91331.t1 | MTR_3g068220 | 42.268 | 97 | 44 | 3 | 1 | 88 | 257 | 350 | 8.00e-13 | 70.9 |
MS.gene91331.t1 | MTR_3g086480 | 45.556 | 90 | 42 | 3 | 1 | 87 | 168 | 253 | 1.24e-12 | 68.9 |
MS.gene91331.t1 | MTR_0337s0060 | 27.976 | 168 | 92 | 3 | 363 | 527 | 21 | 162 | 1.82e-11 | 65.1 |
MS.gene91331.t1 | MTR_3g006140 | 43.333 | 90 | 45 | 2 | 2 | 88 | 281 | 367 | 4.09e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91331.t1 | AT4G38180 | 34.211 | 228 | 144 | 3 | 305 | 527 | 408 | 634 | 3.23e-32 | 133 |
MS.gene91331.t1 | AT4G38180 | 29.358 | 218 | 115 | 6 | 108 | 292 | 2 | 213 | 8.49e-17 | 85.1 |
MS.gene91331.t1 | AT3G22170 | 31.047 | 277 | 168 | 6 | 300 | 566 | 388 | 651 | 1.59e-31 | 131 |
MS.gene91331.t1 | AT3G22170 | 31.047 | 277 | 168 | 6 | 300 | 566 | 388 | 651 | 1.59e-31 | 131 |
MS.gene91331.t1 | AT2G27110 | 32.222 | 270 | 165 | 8 | 297 | 560 | 207 | 464 | 6.07e-30 | 126 |
MS.gene91331.t1 | AT2G27110 | 32.222 | 270 | 165 | 8 | 297 | 560 | 352 | 609 | 9.67e-30 | 126 |
MS.gene91331.t1 | AT2G27110 | 32.222 | 270 | 165 | 8 | 297 | 560 | 352 | 609 | 9.67e-30 | 126 |
MS.gene91331.t1 | AT4G15090 | 29.032 | 279 | 178 | 4 | 305 | 574 | 384 | 651 | 1.35e-27 | 119 |
MS.gene91331.t1 | AT4G15090 | 29.032 | 279 | 178 | 4 | 305 | 574 | 384 | 651 | 1.35e-27 | 119 |
MS.gene91331.t1 | AT4G15090 | 29.032 | 279 | 178 | 4 | 305 | 574 | 384 | 651 | 1.35e-27 | 119 |
MS.gene91331.t1 | AT4G15090 | 29.032 | 279 | 178 | 4 | 305 | 574 | 384 | 651 | 1.35e-27 | 119 |
MS.gene91331.t1 | AT4G15090 | 29.032 | 279 | 178 | 4 | 305 | 574 | 384 | 651 | 1.35e-27 | 119 |
MS.gene91331.t1 | AT4G38170 | 26.201 | 229 | 163 | 3 | 305 | 528 | 173 | 400 | 7.79e-26 | 112 |
MS.gene91331.t1 | AT1G76320 | 28.873 | 284 | 183 | 8 | 289 | 566 | 308 | 578 | 6.14e-24 | 107 |
MS.gene91331.t1 | AT1G76320 | 28.873 | 284 | 183 | 8 | 289 | 566 | 308 | 578 | 6.17e-24 | 107 |
MS.gene91331.t1 | AT1G76320 | 28.873 | 284 | 183 | 8 | 289 | 566 | 308 | 578 | 6.85e-24 | 107 |
MS.gene91331.t1 | AT1G76320 | 28.873 | 284 | 183 | 8 | 289 | 566 | 308 | 578 | 6.85e-24 | 107 |
MS.gene91331.t1 | AT5G18960 | 29.487 | 234 | 156 | 5 | 301 | 529 | 501 | 730 | 5.34e-23 | 104 |
MS.gene91331.t1 | AT5G18960 | 29.487 | 234 | 156 | 5 | 301 | 529 | 501 | 730 | 5.34e-23 | 104 |
MS.gene91331.t1 | AT4G19990 | 28.571 | 252 | 163 | 4 | 318 | 560 | 288 | 531 | 5.43e-22 | 101 |
MS.gene91331.t1 | AT3G06250 | 28.205 | 234 | 159 | 5 | 301 | 529 | 477 | 706 | 7.60e-22 | 101 |
MS.gene91331.t1 | AT3G06250 | 28.205 | 234 | 159 | 5 | 301 | 529 | 477 | 706 | 7.60e-22 | 101 |
MS.gene91331.t1 | AT3G06250 | 28.205 | 234 | 159 | 5 | 301 | 529 | 477 | 706 | 7.60e-22 | 101 |
MS.gene91331.t1 | AT4G19990 | 28.571 | 252 | 163 | 4 | 318 | 560 | 345 | 588 | 7.99e-22 | 100 |
MS.gene91331.t1 | AT4G19990 | 28.571 | 252 | 163 | 4 | 318 | 560 | 359 | 602 | 8.39e-22 | 100 |
MS.gene91331.t1 | AT4G19990 | 28.571 | 252 | 163 | 4 | 318 | 560 | 345 | 588 | 8.51e-22 | 100 |
MS.gene91331.t1 | AT4G19990 | 28.571 | 252 | 163 | 4 | 318 | 560 | 345 | 588 | 8.51e-22 | 100 |
MS.gene91331.t1 | AT4G19990 | 28.571 | 252 | 163 | 4 | 318 | 560 | 345 | 588 | 9.18e-22 | 100 |
MS.gene91331.t1 | AT4G19990 | 28.571 | 252 | 163 | 4 | 318 | 560 | 345 | 588 | 9.18e-22 | 100 |
MS.gene91331.t1 | AT2G32250 | 23.684 | 266 | 193 | 5 | 305 | 566 | 328 | 587 | 3.23e-18 | 89.7 |
MS.gene91331.t1 | AT2G32250 | 23.684 | 266 | 193 | 5 | 305 | 566 | 287 | 546 | 3.50e-18 | 89.4 |
MS.gene91331.t1 | AT2G32250 | 23.684 | 266 | 193 | 5 | 305 | 566 | 287 | 546 | 3.86e-18 | 89.4 |
MS.gene91331.t1 | AT2G32250 | 23.684 | 266 | 193 | 5 | 305 | 566 | 328 | 587 | 3.89e-18 | 89.4 |
MS.gene91331.t1 | AT2G32250 | 23.684 | 266 | 193 | 5 | 305 | 566 | 328 | 587 | 3.89e-18 | 89.4 |
MS.gene91331.t1 | AT2G32250 | 23.684 | 266 | 193 | 5 | 305 | 566 | 328 | 587 | 3.89e-18 | 89.4 |
MS.gene91331.t1 | AT2G32250 | 23.684 | 266 | 193 | 5 | 305 | 566 | 328 | 587 | 3.95e-18 | 89.4 |
MS.gene91331.t1 | AT2G32250 | 23.684 | 266 | 193 | 5 | 305 | 566 | 328 | 587 | 3.95e-18 | 89.4 |
MS.gene91331.t1 | AT1G10240 | 28.095 | 210 | 148 | 2 | 316 | 524 | 397 | 604 | 1.76e-17 | 87.0 |
MS.gene91331.t1 | AT1G10240 | 28.095 | 210 | 148 | 2 | 316 | 524 | 397 | 604 | 1.76e-17 | 87.0 |
MS.gene91331.t1 | AT1G52520 | 26.244 | 221 | 147 | 5 | 321 | 527 | 420 | 638 | 6.70e-17 | 85.1 |
MS.gene91331.t1 | AT5G28530 | 25.000 | 264 | 176 | 6 | 299 | 547 | 385 | 641 | 2.74e-16 | 83.2 |
MS.gene91331.t1 | AT5G28530 | 24.621 | 264 | 177 | 5 | 299 | 547 | 322 | 578 | 3.05e-16 | 83.2 |
MS.gene91331.t1 | AT5G28530 | 24.621 | 264 | 173 | 6 | 299 | 547 | 322 | 574 | 1.14e-15 | 81.3 |
MS.gene91331.t1 | AT5G28530 | 24.621 | 264 | 173 | 6 | 299 | 547 | 385 | 637 | 1.29e-15 | 81.3 |
MS.gene91331.t1 | AT5G28530 | 24.621 | 264 | 173 | 6 | 299 | 547 | 385 | 637 | 1.29e-15 | 81.3 |
MS.gene91331.t1 | AT1G80010 | 24.348 | 230 | 159 | 6 | 321 | 537 | 445 | 672 | 3.75e-12 | 70.1 |
Find 125 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACGCGCTGTGCATCCTATTC+TGG | 0.217722 | 1.3:+72618755 | None:intergenic |
TTCCAGATTGTGTCGATAAA+TGG | 0.224458 | 1.3:-72619049 | MS.gene91331:CDS |
GCGGATCCTTGTGTGGATTT+TGG | 0.237063 | 1.3:-72616432 | MS.gene91331:CDS |
GCACACAATTGGAGTGTTTA+GGG | 0.257295 | 1.3:-72616292 | MS.gene91331:CDS |
TTTGAAGTCAGATATAAATT+TGG | 0.265489 | 1.3:-72617761 | MS.gene91331:CDS |
CTCTCATATCCCCACTTGTT+CGG | 0.283955 | 1.3:+72621027 | None:intergenic |
CCATGCATCGTCCCCTCTTC+TGG | 0.307554 | 1.3:-72619597 | MS.gene91331:CDS |
AATGATTACAGTAAAAGAAT+TGG | 0.319753 | 1.3:-72618915 | MS.gene91331:CDS |
TACAGTAAAAGAATTGGATT+TGG | 0.322823 | 1.3:-72618909 | MS.gene91331:intron |
TTTATTCATCTCTCAATAAC+AGG | 0.328551 | 1.3:-72619635 | MS.gene91331:CDS |
ATTTCACTTGATCGAAAGAT+AGG | 0.332402 | 1.3:-72618726 | MS.gene91331:CDS |
CATTGTACCGCTTCATGAAA+TGG | 0.342244 | 1.3:+72617266 | None:intergenic |
GAGGCTTTGGTATGCTCGGC+TGG | 0.344237 | 1.3:-72616259 | MS.gene91331:CDS |
ACAGCGGCTGCTCCTTGTTC+TGG | 0.346784 | 1.3:-72616391 | MS.gene91331:CDS |
ACCCATTTATCGACACAATC+TGG | 0.348105 | 1.3:+72619047 | None:intergenic |
TCTCATATCCCCACTTGTTC+GGG | 0.349130 | 1.3:+72621028 | None:intergenic |
ATTGTCTTGGGAGATGAATC+TGG | 0.352705 | 1.3:-72618591 | MS.gene91331:CDS |
AAAGAGTTCGCGATTCGGTT+TGG | 0.357814 | 1.3:-72618001 | MS.gene91331:intron |
TGTGTGTCACTGCACAGTTC+TGG | 0.364859 | 1.3:-72616321 | MS.gene91331:CDS |
ATGGATACATGAAGCTCTAT+TGG | 0.380257 | 1.3:+72617216 | None:intergenic |
CTTGGCTTGATTGTGTTGCT+TGG | 0.381074 | 1.3:+72616854 | None:intergenic |
TGCACACAATTGGAGTGTTT+AGG | 0.382627 | 1.3:-72616293 | MS.gene91331:CDS |
AGTTCAACATAACCACCTTC+TGG | 0.387943 | 1.3:-72618679 | MS.gene91331:CDS |
CTCTACCCCACCAGCTTGCT+TGG | 0.393256 | 1.3:+72618534 | None:intergenic |
TCGAAAGATAGGGAAATATA+AGG | 0.398025 | 1.3:-72618715 | MS.gene91331:CDS |
TATGCTCGGCTGGGACTTGT+TGG | 0.403873 | 1.3:-72616249 | MS.gene91331:CDS |
CTTATGCCTCCTGTTTCATC+AGG | 0.415057 | 1.3:+72620910 | None:intergenic |
TGTTATTGTTGTGTGGCTGC+TGG | 0.416855 | 1.3:-72616344 | MS.gene91331:CDS |
TGCCAATAGTGGACCTCACT+TGG | 0.426768 | 1.3:-72618979 | MS.gene91331:CDS |
AATTTATATCTGACTTCAAA+TGG | 0.429735 | 1.3:+72617764 | None:intergenic |
CTTCCAGCTCCTGATGAAAC+AGG | 0.438594 | 1.3:-72620919 | MS.gene91331:CDS |
TCCCAAGTGAGGTCCACTAT+TGG | 0.441740 | 1.3:+72618977 | None:intergenic |
ATTGTACCGCTTCATGAAAT+GGG | 0.445421 | 1.3:+72617267 | None:intergenic |
TCCAGATTGTGTCGATAAAT+GGG | 0.451957 | 1.3:-72619048 | MS.gene91331:CDS |
TCTGGTGTGGTGCACACAAT+TGG | 0.452866 | 1.3:-72616303 | MS.gene91331:CDS |
GCAAAGGAGAGGATGGTAAT+GGG | 0.456049 | 1.3:-72617493 | MS.gene91331:CDS |
GAGATGAACGGCAGAACAAT+CGG | 0.460963 | 1.3:+72619669 | None:intergenic |
GAAATTACAATGAGTTAACT+TGG | 0.462389 | 1.3:+72616836 | None:intergenic |
AAAGGGTTGTCAATGCTAAA+CGG | 0.463116 | 1.3:-72617717 | MS.gene91331:CDS |
AAAGAAAGTATTGCCAATAG+TGG | 0.465982 | 1.3:-72618990 | MS.gene91331:CDS |
TGCAAAGGAGAGGATGGTAA+TGG | 0.465994 | 1.3:-72617494 | MS.gene91331:CDS |
TATCAAAAGAGTTCGCGATT+CGG | 0.466123 | 1.3:-72618006 | MS.gene91331:intron |
ATGGACAAGAGATGCAAGGC+TGG | 0.468317 | 1.3:-72617338 | MS.gene91331:CDS |
CTGCCGTTCATCTCAATCGC+TGG | 0.471398 | 1.3:-72619660 | MS.gene91331:CDS |
GCAGAACAATCGGCGGTTGT+TGG | 0.478347 | 1.3:+72619679 | None:intergenic |
ATATCAAGATACTTGCATAA+AGG | 0.478662 | 1.3:-72617557 | MS.gene91331:CDS |
AATGGGCATGGGCTTATGTT+CGG | 0.481910 | 1.3:-72617852 | MS.gene91331:CDS |
ACAAGCATCACAAATTGTCT+TGG | 0.484770 | 1.3:-72618604 | MS.gene91331:CDS |
ATATATTGATGCAACTCTCT+TGG | 0.487795 | 1.3:+72618561 | None:intergenic |
ATGCTCGGCTGGGACTTGTT+GGG | 0.496236 | 1.3:-72616248 | MS.gene91331:CDS |
CGAATATACACAACATATTG+TGG | 0.502016 | 1.3:+72620975 | None:intergenic |
GATGGTAATGGGAAATCCTA+TGG | 0.503211 | 1.3:-72617482 | MS.gene91331:CDS |
CTGATGAAACAGGAGGCATA+AGG | 0.505291 | 1.3:-72620909 | MS.gene91331:CDS |
CAAGCATCACAAATTGTCTT+GGG | 0.505716 | 1.3:-72618603 | MS.gene91331:CDS |
CCAGAAGAGGGGACGATGCA+TGG | 0.510778 | 1.3:+72619597 | None:intergenic |
AATAGGATGCACAGCGCGTA+TGG | 0.512747 | 1.3:-72618751 | MS.gene91331:CDS |
CAATATGTTGTGTATATTCG+AGG | 0.516331 | 1.3:-72620972 | MS.gene91331:CDS |
GCCTAAATTGAAAATGAAGA+AGG | 0.516431 | 1.3:-72617653 | MS.gene91331:CDS |
TCTAGAGCAGAAACCAGAAT+AGG | 0.517357 | 1.3:-72618768 | MS.gene91331:CDS |
CCTCCTGTTTCATCAGGAGC+TGG | 0.524036 | 1.3:+72620916 | None:intergenic |
GAAGTAATCAAGGTTGGAGT+GGG | 0.524671 | 1.3:-72617315 | MS.gene91331:CDS |
AACACTACATACTAAAACGA+TGG | 0.530470 | 1.3:-72617357 | MS.gene91331:CDS |
GCAAGGCTGGGAAGTAATCA+AGG | 0.534455 | 1.3:-72617325 | MS.gene91331:CDS |
CAGGAGGCATAAGGGTCGAT+TGG | 0.535880 | 1.3:-72620900 | MS.gene91331:CDS |
AAGCTTCTGTTATTGTTGTG+TGG | 0.537017 | 1.3:-72616351 | MS.gene91331:CDS |
TTTCACTTGATCGAAAGATA+GGG | 0.538851 | 1.3:-72618725 | MS.gene91331:CDS |
TGATAATGCAAAGGAGAGGA+TGG | 0.539415 | 1.3:-72617500 | MS.gene91331:CDS |
GGCTGGGAAGTAATCAAGGT+TGG | 0.541437 | 1.3:-72617321 | MS.gene91331:CDS |
AGGCTTTGGTATGCTCGGCT+GGG | 0.543142 | 1.3:-72616258 | MS.gene91331:CDS |
GCTGCTCCTTGTTCTGGTGG+AGG | 0.549405 | 1.3:-72616385 | MS.gene91331:CDS |
GCAGTTTGAATCTGAGGCGG+TGG | 0.555318 | 1.3:-72618952 | MS.gene91331:CDS |
TAGCGAGGCTTTGGTATGCT+CGG | 0.559644 | 1.3:-72616263 | MS.gene91331:CDS |
TGATGAAACAGGAGGCATAA+GGG | 0.560113 | 1.3:-72620908 | MS.gene91331:CDS |
AAAATTTGAGGAATTTCAAG+AGG | 0.564400 | 1.3:-72617590 | MS.gene91331:CDS |
GTTCGGAAAACATTCACGGC+AGG | 0.564623 | 1.3:-72617835 | MS.gene91331:CDS |
GCGGCTGCTCCTTGTTCTGG+TGG | 0.565567 | 1.3:-72616388 | MS.gene91331:CDS |
GGGAATGCAGTTTGAATCTG+AGG | 0.567573 | 1.3:-72618958 | MS.gene91331:CDS |
GTGCCTCAGATATGTGTCGA+TGG | 0.570120 | 1.3:+72618625 | None:intergenic |
GCCAATAGTGGACCTCACTT+GGG | 0.571514 | 1.3:-72618978 | MS.gene91331:CDS |
TTATGTTCGGAAAACATTCA+CGG | 0.576310 | 1.3:-72617839 | MS.gene91331:CDS |
TGGACAAGAGATGCAAGGCT+GGG | 0.580811 | 1.3:-72617337 | MS.gene91331:CDS |
GTAATCAAGGTTGGAGTGGG+AGG | 0.581542 | 1.3:-72617312 | MS.gene91331:CDS |
CGAATCATATGAACATACTC+AGG | 0.583230 | 1.3:+72618651 | None:intergenic |
CATTGAGCAACCCGAACAAG+TGG | 0.585822 | 1.3:-72621038 | MS.gene91331:CDS |
AATATGTTGTGTATATTCGA+GGG | 0.589975 | 1.3:-72620971 | MS.gene91331:CDS |
GGACGATGCATGGAGTGGAG+CGG | 0.592126 | 1.3:+72619607 | None:intergenic |
CACACAATTGGAGTGTTTAG+GGG | 0.592573 | 1.3:-72616291 | MS.gene91331:CDS |
CGATGCATGGAGTGGAGCGG+AGG | 0.595721 | 1.3:+72619610 | None:intergenic |
AGACAACGGTTACCAGAAGA+GGG | 0.596721 | 1.3:+72619585 | None:intergenic |
GAGACAACGGTTACCAGAAG+AGG | 0.599923 | 1.3:+72619584 | None:intergenic |
ACGTACTTTCTCAGAAAACA+TGG | 0.600967 | 1.3:-72619084 | MS.gene91331:intron |
GGAAGTAATCAAGGTTGGAG+TGG | 0.603856 | 1.3:-72617316 | MS.gene91331:CDS |
TGCCTCAGATATGTGTCGAT+GGG | 0.604423 | 1.3:+72618626 | None:intergenic |
AGAGGGGACGATGCATGGAG+TGG | 0.609144 | 1.3:+72619602 | None:intergenic |
TGTCGTAAATTTGAGACACA+TGG | 0.610330 | 1.3:-72617439 | MS.gene91331:CDS |
ACACAATTGGAGTGTTTAGG+GGG | 0.610603 | 1.3:-72616290 | MS.gene91331:CDS |
GAGCTTCCTCCACCAGAACA+AGG | 0.610671 | 1.3:+72616379 | None:intergenic |
CACAAATTATGATAATGCAA+AGG | 0.613820 | 1.3:-72617509 | MS.gene91331:CDS |
TCTGCTCTAGACTCCGCCGT+CGG | 0.614843 | 1.3:+72618780 | None:intergenic |
AAACGACGGCGACGAGACAA+CGG | 0.618207 | 1.3:+72619571 | None:intergenic |
ATATATATATCCAAGCAAGC+TGG | 0.620772 | 1.3:-72618544 | MS.gene91331:intron |
TCAAGATACTTGCATAAAGG+AGG | 0.621392 | 1.3:-72617554 | MS.gene91331:CDS |
AACGATGGACAAGAGATGCA+AGG | 0.621531 | 1.3:-72617342 | MS.gene91331:CDS |
GTCACTGCACAGTTCTGGTG+TGG | 0.631768 | 1.3:-72616316 | MS.gene91331:CDS |
TTGGTCAATTTAAGCAACTG+AGG | 0.640782 | 1.3:+72617235 | None:intergenic |
GATTGTTTGATTTGAAACGA+CGG | 0.641951 | 1.3:+72619557 | None:intergenic |
ATTATGATAATGCAAAGGAG+AGG | 0.652746 | 1.3:-72617504 | MS.gene91331:CDS |
ATTGAGCAACCCGAACAAGT+GGG | 0.652805 | 1.3:-72621037 | MS.gene91331:CDS |
TTGAGCAACCCGAACAAGTG+GGG | 0.657706 | 1.3:-72621036 | MS.gene91331:CDS |
TCAAACTGCATTCCCAAGTG+AGG | 0.657944 | 1.3:+72618966 | None:intergenic |
ATCATATGAACATACTCAGG+TGG | 0.658150 | 1.3:+72618654 | None:intergenic |
CATACTCAGGTGGAACCAGA+AGG | 0.658672 | 1.3:+72618664 | None:intergenic |
ATGCATAGATCTACTCGAGG+AGG | 0.665646 | 1.3:-72617968 | MS.gene91331:CDS |
TGACAAAAGACGTCAACCGA+CGG | 0.667263 | 1.3:-72618796 | MS.gene91331:CDS |
ACACCAGCGATTGAGATGAA+CGG | 0.669773 | 1.3:+72619657 | None:intergenic |
CCAGCTCCTGATGAAACAGG+AGG | 0.671118 | 1.3:-72620916 | MS.gene91331:CDS |
CTGTCGTTATTATTGTACAG+CGG | 0.673152 | 1.3:-72616407 | MS.gene91331:CDS |
CTCCCATCGACACATATCTG+AGG | 0.683683 | 1.3:-72618628 | MS.gene91331:CDS |
ACTCAGGTGGAACCAGAAGG+TGG | 0.690819 | 1.3:+72618667 | None:intergenic |
ACAGCACCAAAATCCACACA+AGG | 0.706376 | 1.3:+72616426 | None:intergenic |
CAAAAGACGTCAACCGACGG+CGG | 0.706901 | 1.3:-72618793 | MS.gene91331:CDS |
AGCATGCATAGATCTACTCG+AGG | 0.717604 | 1.3:-72617971 | MS.gene91331:CDS |
GACAACGGTTACCAGAAGAG+GGG | 0.721051 | 1.3:+72619586 | None:intergenic |
AATGCAGTTTGAATCTGAGG+CGG | 0.731388 | 1.3:-72618955 | MS.gene91331:CDS |
ATGAACGGCAGAACAATCGG+CGG | 0.757121 | 1.3:+72619672 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATTATTATTATTATTATT+AGG | - | chr1.3:72617163-72617182 | MS.gene91331:intron | 0.0% |
!! | AAATACTAGAAAATGAAAAA+TGG | - | chr1.3:72616731-72616750 | MS.gene91331:intron | 15.0% |
!! | AGAAAAGTTAAATAAATGAT+AGG | + | chr1.3:72620393-72620412 | None:intergenic | 15.0% |
!! | ATCAAATAAAAAATGTTACA+AGG | + | chr1.3:72617258-72617277 | None:intergenic | 15.0% |
!!! | AATTTTTTACTCACTTTAAA+AGG | - | chr1.3:72619615-72619634 | MS.gene91331:CDS | 15.0% |
!!! | AGCTAATAACAAATATATTT+TGG | - | chr1.3:72618993-72619012 | MS.gene91331:CDS | 15.0% |
!!! | ATTCTTTTATGATTTTCAAA+TGG | - | chr1.3:72618961-72618980 | MS.gene91331:CDS | 15.0% |
!!! | ATTTTTTACTCACTTTAAAA+GGG | - | chr1.3:72619616-72619635 | MS.gene91331:CDS | 15.0% |
!!! | GCTAATAACAAATATATTTT+GGG | - | chr1.3:72618994-72619013 | MS.gene91331:CDS | 15.0% |
!!! | TTTTAAATTGAAGGAAAAAT+GGG | - | chr1.3:72619481-72619500 | MS.gene91331:intron | 15.0% |
!!! | TTTTTAAATTGAAGGAAAAA+TGG | - | chr1.3:72619480-72619499 | MS.gene91331:intron | 15.0% |
!! | AAAAAGAAAAAATCTCAAGA+AGG | - | chr1.3:72620306-72620325 | MS.gene91331:intron | 20.0% |
!! | AAATCATTGGCAAAAAAAAA+GGG | + | chr1.3:72616568-72616587 | None:intergenic | 20.0% |
!! | AATGATTACAGTAAAAGAAT+TGG | - | chr1.3:72618435-72618454 | MS.gene91331:intron | 20.0% |
!! | AATTTATATCTGACTTCAAA+TGG | + | chr1.3:72619589-72619608 | None:intergenic | 20.0% |
!! | ACAAAAAAAAAACTAAAGCT+TGG | - | chr1.3:72616782-72616801 | MS.gene91331:intron | 20.0% |
!! | ATACAAAAAAATATACGTAC+CGG | + | chr1.3:72620348-72620367 | None:intergenic | 20.0% |
!! | ATTAATGATTATGGATACTT+TGG | - | chr1.3:72619031-72619050 | MS.gene91331:CDS | 20.0% |
!! | GTATACTTAATTAAGTCTAA+GGG | - | chr1.3:72617331-72617350 | MS.gene91331:CDS | 20.0% |
!! | TAAAAAACGTTATATGTCTT+TGG | - | chr1.3:72620244-72620263 | MS.gene91331:intron | 20.0% |
!! | TATGTCAAACTAAAAACTTT+AGG | - | chr1.3:72616239-72616258 | MS.gene91331:CDS | 20.0% |
!! | TGAAAATCATAAAAGAATGA+TGG | + | chr1.3:72618959-72618978 | None:intergenic | 20.0% |
!! | TGTATACTTAATTAAGTCTA+AGG | - | chr1.3:72617330-72617349 | MS.gene91331:CDS | 20.0% |
!!! | AAAGTGAATTTTTGAATGAA+TGG | - | chr1.3:72619405-72619424 | MS.gene91331:intron | 20.0% |
!!! | AATAACAAATATATTTTGGG+CGG | - | chr1.3:72618997-72619016 | MS.gene91331:CDS | 20.0% |
!!! | ACATTGCATTATTTTCTATT+AGG | - | chr1.3:72616264-72616283 | MS.gene91331:CDS | 20.0% |
!!! | CATTAATAGTTTGTTTACTT+TGG | - | chr1.3:72616676-72616695 | MS.gene91331:intron | 20.0% |
!!! | GCATTCAATTTTTAAATTGA+AGG | - | chr1.3:72619472-72619491 | MS.gene91331:intron | 20.0% |
!!! | TGAAATTCCTCAAATTTTTT+TGG | + | chr1.3:72619758-72619777 | None:intergenic | 20.0% |
!!! | TTTGAAGTCAGATATAAATT+TGG | - | chr1.3:72619589-72619608 | MS.gene91331:CDS | 20.0% |
! | AAAAAACTAAAGCTTGGTAA+AGG | - | chr1.3:72616788-72616807 | MS.gene91331:intron | 25.0% |
! | AAAAATGTGTTTGATTCACA+AGG | + | chr1.3:72617393-72617412 | None:intergenic | 25.0% |
! | AAAATGTGTTTGATTCACAA+GGG | + | chr1.3:72617392-72617411 | None:intergenic | 25.0% |
! | AAAATTTGAGGAATTTCAAG+AGG | - | chr1.3:72619760-72619779 | MS.gene91331:intron | 25.0% |
! | AATATGTTGTGTATATTCGA+GGG | - | chr1.3:72616379-72616398 | MS.gene91331:CDS | 25.0% |
! | ATATCAAGATACTTGCATAA+AGG | - | chr1.3:72619793-72619812 | MS.gene91331:intron | 25.0% |
! | CAAATCATTGGCAAAAAAAA+AGG | + | chr1.3:72616569-72616588 | None:intergenic | 25.0% |
! | GAAATGTTGAAAACAACAAA+CGG | + | chr1.3:72618191-72618210 | None:intergenic | 25.0% |
! | GAAATTACAATGAGTTAACT+TGG | + | chr1.3:72620517-72620536 | None:intergenic | 25.0% |
! | TACAGTAAAAGAATTGGATT+TGG | - | chr1.3:72618441-72618460 | MS.gene91331:intron | 25.0% |
! | TGTATAAGAATTGAATGTGT+TGG | - | chr1.3:72616652-72616671 | MS.gene91331:intron | 25.0% |
! | TTACACTCCAAAAAAATTTG+AGG | - | chr1.3:72619748-72619767 | MS.gene91331:intron | 25.0% |
! | TTGTCTACTAATTTGATCTT+AGG | + | chr1.3:72616819-72616838 | None:intergenic | 25.0% |
! | TTTATTCATCTCTCAATAAC+AGG | - | chr1.3:72617715-72617734 | MS.gene91331:CDS | 25.0% |
!! | AGAATTTGCTTAAAACCAAA+AGG | - | chr1.3:72618867-72618886 | MS.gene91331:intron | 25.0% |
!! | CACAAATTATGATAATGCAA+AGG | - | chr1.3:72619841-72619860 | MS.gene91331:intron | 25.0% |
!! | GCATTATTTTCTATTAGGAA+TGG | - | chr1.3:72616269-72616288 | MS.gene91331:CDS | 25.0% |
!! | GTGGTATGTGAATTTTATAT+CGG | - | chr1.3:72617832-72617851 | MS.gene91331:CDS | 25.0% |
!! | TTGTTTGAAATATGTCATCA+AGG | + | chr1.3:72618924-72618943 | None:intergenic | 25.0% |
!! | TTTGGTATTCTTTGAGAATA+TGG | - | chr1.3:72618459-72618478 | MS.gene91331:intron | 25.0% |
!!! | ATAATGTTTTGAAAGATTCG+TGG | - | chr1.3:72619447-72619466 | MS.gene91331:intron | 25.0% |
!!! | ATTATTTGGTGTGCATTATT+TGG | - | chr1.3:72617871-72617890 | MS.gene91331:CDS | 25.0% |
!!! | CTATTGATTTGTGCATTATT+TGG | - | chr1.3:72617857-72617876 | MS.gene91331:CDS | 25.0% |
!!! | TATATGGTCTAAGCTTTATT+TGG | - | chr1.3:72617905-72617924 | MS.gene91331:CDS | 25.0% |
!!! | TATTTGGTTTGTACATTTAC+TGG | - | chr1.3:72618060-72618079 | MS.gene91331:intron | 25.0% |
!!! | TGATTTTAATTGGACTTGTT+TGG | - | chr1.3:72616956-72616975 | MS.gene91331:intron | 25.0% |
!!! | TGGTTTTAAGCAAATTCTTA+AGG | + | chr1.3:72618865-72618884 | None:intergenic | 25.0% |
!!! | TTTGGTTTGTGAATCATATA+TGG | - | chr1.3:72617889-72617908 | MS.gene91331:CDS | 25.0% |
AAATAAGGATTATCGACCTT+TGG | - | chr1.3:72619087-72619106 | MS.gene91331:intron | 30.0% | |
AAATGTGTTTGATTCACAAG+GGG | + | chr1.3:72617391-72617410 | None:intergenic | 30.0% | |
AACACTACATACTAAAACGA+TGG | - | chr1.3:72619993-72620012 | MS.gene91331:intron | 30.0% | |
AACCAATTAACACAACTCTT+AGG | - | chr1.3:72616888-72616907 | MS.gene91331:intron | 30.0% | |
AATAAGGATTATCGACCTTT+GGG | - | chr1.3:72619088-72619107 | MS.gene91331:intron | 30.0% | |
ACCAATTAACACAACTCTTA+GGG | - | chr1.3:72616889-72616908 | MS.gene91331:intron | 30.0% | |
AGCACATGAATAAGAATAGT+AGG | + | chr1.3:72618120-72618139 | None:intergenic | 30.0% | |
AGTACTTTGATGTGTTTGTT+AGG | - | chr1.3:72620615-72620634 | MS.gene91331:intron | 30.0% | |
ATAGCAGGAAAAACTTGTAA+TGG | - | chr1.3:72616592-72616611 | MS.gene91331:intron | 30.0% | |
ATATAAGACAGAATGCTCTT+AGG | - | chr1.3:72619306-72619325 | MS.gene91331:intron | 30.0% | |
ATATATATATCCAAGCAAGC+TGG | - | chr1.3:72618806-72618825 | MS.gene91331:CDS | 30.0% | |
ATATATTGATGCAACTCTCT+TGG | + | chr1.3:72618792-72618811 | None:intergenic | 30.0% | |
ATGTGATCTATTTCAAACGT+GGG | - | chr1.3:72618005-72618024 | MS.gene91331:intron | 30.0% | |
ATTATTCTCAATGCTAATCG+AGG | + | chr1.3:72616625-72616644 | None:intergenic | 30.0% | |
ATTTCACTTGATCGAAAGAT+AGG | - | chr1.3:72618624-72618643 | MS.gene91331:CDS | 30.0% | |
CAATATGTTGTGTATATTCG+AGG | - | chr1.3:72616378-72616397 | MS.gene91331:CDS | 30.0% | |
CGAATATACACAACATATTG+TGG | + | chr1.3:72616378-72616397 | None:intergenic | 30.0% | |
GCACAGATGATTAATGATTA+TGG | - | chr1.3:72619022-72619041 | MS.gene91331:CDS | 30.0% | |
GCCTAAATTGAAAATGAAGA+AGG | - | chr1.3:72619697-72619716 | MS.gene91331:intron | 30.0% | |
GGAAATAAAAGCAGAATAGA+TGG | - | chr1.3:72618480-72618499 | MS.gene91331:intron | 30.0% | |
TAAGCAAATTCTTAAGGTCT+TGG | + | chr1.3:72618859-72618878 | None:intergenic | 30.0% | |
TATGTGATCTATTTCAAACG+TGG | - | chr1.3:72618004-72618023 | MS.gene91331:intron | 30.0% | |
TCAAATAACCACTGAAAAGA+AGG | + | chr1.3:72619187-72619206 | None:intergenic | 30.0% | |
TCGAAAGATAGGGAAATATA+AGG | - | chr1.3:72618635-72618654 | MS.gene91331:CDS | 30.0% | |
TTATGTTCGGAAAACATTCA+CGG | - | chr1.3:72619511-72619530 | MS.gene91331:intron | 30.0% | |
TTCATCATTCGCAATTGATA+TGG | + | chr1.3:72620156-72620175 | None:intergenic | 30.0% | |
TTGTTGGACTTAATAATCAC+AGG | - | chr1.3:72619116-72619135 | MS.gene91331:intron | 30.0% | |
TTTACGATTTCATAGACCAA+CGG | + | chr1.3:72617298-72617317 | None:intergenic | 30.0% | |
TTTATCAAGAATCATGTGAC+AGG | - | chr1.3:72620884-72620903 | MS.gene91331:CDS | 30.0% | |
TTTCACTTGATCGAAAGATA+GGG | - | chr1.3:72618625-72618644 | MS.gene91331:CDS | 30.0% | |
! | AAACAATTCCTTCTTTTCAG+TGG | - | chr1.3:72619176-72619195 | MS.gene91331:intron | 30.0% |
! | AACAAACACATCAAAGTACT+TGG | + | chr1.3:72620615-72620634 | None:intergenic | 30.0% |
! | AACAAACACATTAGAGTACT+TGG | + | chr1.3:72620576-72620595 | None:intergenic | 30.0% |
! | ATCCTTATTTGTCTTGTAAG+TGG | + | chr1.3:72619077-72619096 | None:intergenic | 30.0% |
! | ATTATGATAATGCAAAGGAG+AGG | - | chr1.3:72619846-72619865 | MS.gene91331:intron | 30.0% |
! | ATTGTACACTCTGTTACTTA+TGG | - | chr1.3:72616528-72616547 | MS.gene91331:intron | 30.0% |
! | CAAGAAACTTTTTGTTCCAT+AGG | + | chr1.3:72619887-72619906 | None:intergenic | 30.0% |
! | GCCTTCTTCATTTTCAATTT+AGG | + | chr1.3:72619701-72619720 | None:intergenic | 30.0% |
! | GTTTGGTTCGATTATTAGAA+GGG | - | chr1.3:72616973-72616992 | MS.gene91331:intron | 30.0% |
! | TGATCTGTTAGAATGGTTTT+AGG | + | chr1.3:72619241-72619260 | None:intergenic | 30.0% |
! | TGTTTGGTTCGATTATTAGA+AGG | - | chr1.3:72616972-72616991 | MS.gene91331:intron | 30.0% |
! | TTTTAGACATCTTCGATATG+AGG | - | chr1.3:72616475-72616494 | MS.gene91331:intron | 30.0% |
!! | AAAGAAAGTATTGCCAATAG+TGG | - | chr1.3:72618360-72618379 | MS.gene91331:intron | 30.0% |
!! | GAAACTTTTCTGAAAGCAAT+GGG | - | chr1.3:72619205-72619224 | MS.gene91331:intron | 30.0% |
!! | GATTGTTTGATTTGAAACGA+CGG | + | chr1.3:72617796-72617815 | None:intergenic | 30.0% |
!! | GGGAAGCAAATGATTTTAAT+TGG | - | chr1.3:72616946-72616965 | MS.gene91331:intron | 30.0% |
!! | TCGTTTTAGTATGTAGTGTT+CGG | + | chr1.3:72619993-72620012 | None:intergenic | 30.0% |
!! | TGAAACTTTTCTGAAAGCAA+TGG | - | chr1.3:72619204-72619223 | MS.gene91331:intron | 30.0% |
!!! | TAACGTTTTTTACTCTAACG+TGG | + | chr1.3:72620236-72620255 | None:intergenic | 30.0% |
!!! | TTTTGGAGTGTAAACATTTG+CGG | + | chr1.3:72619741-72619760 | None:intergenic | 30.0% |
AAAAAGCCCATTTCATGAAG+CGG | - | chr1.3:72620077-72620096 | MS.gene91331:intron | 35.0% | |
AAAGGGTTGTCAATGCTAAA+CGG | - | chr1.3:72619633-72619652 | MS.gene91331:CDS | 35.0% | |
AAGACCCTAAATGAGGTAAA+TGG | + | chr1.3:72617462-72617481 | None:intergenic | 35.0% | |
AAGATTCACATGCTTCAAAG+AGG | - | chr1.3:72618518-72618537 | MS.gene91331:intron | 35.0% | |
AAGCTTCTGTTATTGTTGTG+TGG | - | chr1.3:72620999-72621018 | MS.gene91331:CDS | 35.0% | |
AATTGAAGGAAAAATGGGCA+TGG | - | chr1.3:72619486-72619505 | MS.gene91331:intron | 35.0% | |
AATTTGGGGATGCAAAAAGT+GGG | + | chr1.3:72617038-72617057 | None:intergenic | 35.0% | |
ACAAGCATCACAAATTGTCT+TGG | - | chr1.3:72618746-72618765 | MS.gene91331:CDS | 35.0% | |
ACGTACTTTCTCAGAAAACA+TGG | - | chr1.3:72618266-72618285 | MS.gene91331:intron | 35.0% | |
ACTCCGAAAAACTCCAATTT+GGG | + | chr1.3:72617053-72617072 | None:intergenic | 35.0% | |
AGATTCACATGCTTCAAAGA+GGG | - | chr1.3:72618519-72618538 | MS.gene91331:intron | 35.0% | |
AGCTCCATTTACCTCATTTA+GGG | - | chr1.3:72617455-72617474 | MS.gene91331:CDS | 35.0% | |
AGGAAGCAATCACTAAAGTA+CGG | - | chr1.3:72618887-72618906 | MS.gene91331:intron | 35.0% | |
AGGTTTAGTACAATCGTTAC+CGG | - | chr1.3:72620326-72620345 | MS.gene91331:intron | 35.0% | |
ATATCATTCTTGTCTTCCGT+TGG | - | chr1.3:72617279-72617298 | MS.gene91331:CDS | 35.0% | |
ATCATATGAACATACTCAGG+TGG | + | chr1.3:72618699-72618718 | None:intergenic | 35.0% | |
ATGGATACATGAAGCTCTAT+TGG | + | chr1.3:72620137-72620156 | None:intergenic | 35.0% | |
ATTGAAGGAAAAATGGGCAT+GGG | - | chr1.3:72619487-72619506 | MS.gene91331:intron | 35.0% | |
ATTGTACCGCTTCATGAAAT+GGG | + | chr1.3:72620086-72620105 | None:intergenic | 35.0% | |
CAAATTAGTAGACAAGACGA+AGG | - | chr1.3:72616824-72616843 | MS.gene91331:intron | 35.0% | |
CAAGCATCACAAATTGTCTT+GGG | - | chr1.3:72618747-72618766 | MS.gene91331:CDS | 35.0% | |
CACCACTTACAAGACAAATA+AGG | - | chr1.3:72619072-72619091 | MS.gene91331:CDS | 35.0% | |
CCAATTAACACAACTCTTAG+GGG | - | chr1.3:72616890-72616909 | MS.gene91331:intron | 35.0% | |
CGAATCATATGAACATACTC+AGG | + | chr1.3:72618702-72618721 | None:intergenic | 35.0% | |
CTGTCGTTATTATTGTACAG+CGG | - | chr1.3:72620943-72620962 | MS.gene91331:CDS | 35.0% | |
GTTGAGTTTCATTGCTTACT+TGG | + | chr1.3:72620463-72620482 | None:intergenic | 35.0% | |
TACTCCGAAAAACTCCAATT+TGG | + | chr1.3:72617054-72617073 | None:intergenic | 35.0% | |
TATCAAAAGAGTTCGCGATT+CGG | - | chr1.3:72619344-72619363 | MS.gene91331:intron | 35.0% | |
TCAAGATACTTGCATAAAGG+AGG | - | chr1.3:72619796-72619815 | MS.gene91331:intron | 35.0% | |
TCCTGCTATAGTCAAATCAT+TGG | + | chr1.3:72616581-72616600 | None:intergenic | 35.0% | |
TGCATAAAGGAGGTGAAAAA+AGG | - | chr1.3:72619806-72619825 | MS.gene91331:intron | 35.0% | |
TGCATCTTGATCTGTTAGAA+TGG | + | chr1.3:72619248-72619267 | None:intergenic | 35.0% | |
TTATTAGAAGGGAAGGAAAG+AGG | - | chr1.3:72616984-72617003 | MS.gene91331:intron | 35.0% | |
TTGGTCAATTTAAGCAACTG+AGG | + | chr1.3:72620118-72620137 | None:intergenic | 35.0% | |
! | ATCCCCAAATTGGAGTTTTT+CGG | - | chr1.3:72617047-72617066 | MS.gene91331:intron | 35.0% |
! | ATTTACCTCATTTAGGGTCT+TGG | - | chr1.3:72617461-72617480 | MS.gene91331:CDS | 35.0% |
! | CAATGGCTAAAGCTATTTCA+TGG | - | chr1.3:72619269-72619288 | MS.gene91331:intron | 35.0% |
! | CGTGATGAACATTTTGTTCA+TGG | + | chr1.3:72618338-72618357 | None:intergenic | 35.0% |
! | CTGTTATAACAGTGATAGTG+AGG | - | chr1.3:72620685-72620704 | MS.gene91331:intron | 35.0% |
! | CTTTAGTGATTGCTTCCTTT+TGG | + | chr1.3:72618885-72618904 | None:intergenic | 35.0% |
! | GCGAACTCTTTTGATATAGA+TGG | + | chr1.3:72619340-72619359 | None:intergenic | 35.0% |
! | TATTTCATGGATTGTGCACT+TGG | - | chr1.3:72619282-72619301 | MS.gene91331:intron | 35.0% |
! | TCCAGATTGTGTCGATAAAT+GGG | - | chr1.3:72618302-72618321 | MS.gene91331:intron | 35.0% |
! | TGTCGTAAATTTGAGACACA+TGG | - | chr1.3:72619911-72619930 | MS.gene91331:intron | 35.0% |
! | TGTTTGTTAGGAGACTTGTA+AGG | - | chr1.3:72620627-72620646 | MS.gene91331:intron | 35.0% |
! | TTCCAGATTGTGTCGATAAA+TGG | - | chr1.3:72618301-72618320 | MS.gene91331:intron | 35.0% |
!! | ACAGTTTTGATGTGTGTGTT+AGG | - | chr1.3:72620537-72620556 | MS.gene91331:intron | 35.0% |
!! | ATTGGAGTTTTTCGGAGTAA+AGG | - | chr1.3:72617055-72617074 | MS.gene91331:intron | 35.0% |
!! | CATGTGACAGGTTTTTGTTT+TGG | - | chr1.3:72620896-72620915 | MS.gene91331:CDS | 35.0% |
!! | CGTTTTAGTATGTAGTGTTC+GGG | + | chr1.3:72619992-72620011 | None:intergenic | 35.0% |
!! | TTGGAGTTTTTCGGAGTAAA+GGG | - | chr1.3:72617056-72617075 | MS.gene91331:intron | 35.0% |
!! | TTGGTTTGAGAGTTTTGTAG+AGG | - | chr1.3:72616917-72616936 | MS.gene91331:intron | 35.0% |
!! | TTTGAGAGTTTTGTAGAGGA+GGG | - | chr1.3:72616921-72616940 | MS.gene91331:intron | 35.0% |
!!! | ATCTCTGTCGTTTTAAACAG+TGG | - | chr1.3:72617813-72617832 | MS.gene91331:CDS | 35.0% |
AACAGATCAAGATGCAGCAA+TGG | - | chr1.3:72619252-72619271 | MS.gene91331:intron | 40.0% | |
AATGCAGTTTGAATCTGAGG+CGG | - | chr1.3:72618395-72618414 | MS.gene91331:intron | 40.0% | |
ACCCATTTATCGACACAATC+TGG | + | chr1.3:72618306-72618325 | None:intergenic | 40.0% | |
AGTCCAACAAATACACCCAA+AGG | + | chr1.3:72619106-72619125 | None:intergenic | 40.0% | |
AGTTCAACATAACCACCTTC+TGG | - | chr1.3:72618671-72618690 | MS.gene91331:CDS | 40.0% | |
ATATATCCAAGCAAGCTGGT+GGG | - | chr1.3:72618810-72618829 | MS.gene91331:CDS | 40.0% | |
ATCACTAAAGTACGGTGAAG+TGG | - | chr1.3:72618895-72618914 | MS.gene91331:intron | 40.0% | |
ATGCAAAAAGTGGGTCTTGA+AGG | + | chr1.3:72617029-72617048 | None:intergenic | 40.0% | |
ATTGTCTTGGGAGATGAATC+TGG | - | chr1.3:72618759-72618778 | MS.gene91331:CDS | 40.0% | |
CAATGTTGCCCCAAAAATGA+CGG | + | chr1.3:72619146-72619165 | None:intergenic | 40.0% | |
CAATTTGGGGATGCAAAAAG+TGG | + | chr1.3:72617039-72617058 | None:intergenic | 40.0% | |
CAGCTCCATTTACCTCATTT+AGG | - | chr1.3:72617454-72617473 | MS.gene91331:CDS | 40.0% | |
CATTGTACCGCTTCATGAAA+TGG | + | chr1.3:72620087-72620106 | None:intergenic | 40.0% | |
CCCCTAAGAGTTGTGTTAAT+TGG | + | chr1.3:72616893-72616912 | None:intergenic | 40.0% | |
CTAAATGAGGTAAATGGAGC+TGG | + | chr1.3:72617456-72617475 | None:intergenic | 40.0% | |
CTCCGAAAAACTCCAATTTG+GGG | + | chr1.3:72617052-72617071 | None:intergenic | 40.0% | |
GAAGTAATCAAGGTTGGAGT+GGG | - | chr1.3:72620035-72620054 | MS.gene91331:intron | 40.0% | |
GCCAATGATTTGACTATAGC+AGG | - | chr1.3:72616577-72616596 | MS.gene91331:intron | 40.0% | |
GGTTCGATTATTAGAAGGGA+AGG | - | chr1.3:72616977-72616996 | MS.gene91331:intron | 40.0% | |
TAAATGGAGCTGGTGGTAAA+TGG | + | chr1.3:72617446-72617465 | None:intergenic | 40.0% | |
TATATATCCAAGCAAGCTGG+TGG | - | chr1.3:72618809-72618828 | MS.gene91331:CDS | 40.0% | |
TCACTAAAGTACGGTGAAGT+GGG | - | chr1.3:72618896-72618915 | MS.gene91331:intron | 40.0% | |
TGCAAAAAGTGGGTCTTGAA+GGG | + | chr1.3:72617028-72617047 | None:intergenic | 40.0% | |
TGTTTGATTCACAAGGGGAA+GGG | + | chr1.3:72617386-72617405 | None:intergenic | 40.0% | |
! | ACACAATTGGAGTGTTTAGG+GGG | - | chr1.3:72621060-72621079 | MS.gene91331:CDS | 40.0% |
! | CACACAATTGGAGTGTTTAG+GGG | - | chr1.3:72621059-72621078 | MS.gene91331:CDS | 40.0% |
! | CGTGGCAAAAATGGATTCAA+TGG | - | chr1.3:72617494-72617513 | MS.gene91331:CDS | 40.0% |
! | GCACACAATTGGAGTGTTTA+GGG | - | chr1.3:72621058-72621077 | MS.gene91331:CDS | 40.0% |
! | GTTTTTGCATCGCTGCTATT+TGG | - | chr1.3:72618044-72618063 | MS.gene91331:intron | 40.0% |
! | TCTAGAGCAGAAACCAGAAT+AGG | - | chr1.3:72618582-72618601 | MS.gene91331:CDS | 40.0% |
! | TGATAATGCAAAGGAGAGGA+TGG | - | chr1.3:72619850-72619869 | MS.gene91331:intron | 40.0% |
! | TGATGAAACAGGAGGCATAA+GGG | - | chr1.3:72616442-72616461 | MS.gene91331:CDS | 40.0% |
! | TGCACACAATTGGAGTGTTT+AGG | - | chr1.3:72621057-72621076 | MS.gene91331:CDS | 40.0% |
!! | ACTTTTCTGAAAGCAATGGG+TGG | - | chr1.3:72619208-72619227 | MS.gene91331:intron | 40.0% |
!! | CACTTTTTGCATCCCCAAAT+TGG | - | chr1.3:72617037-72617056 | MS.gene91331:intron | 40.0% |
!! | GATGGTAATGGGAAATCCTA+TGG | - | chr1.3:72619868-72619887 | MS.gene91331:intron | 40.0% |
!! | GCTTCATGAAATGGGCTTTT+TGG | + | chr1.3:72620078-72620097 | None:intergenic | 40.0% |
!! | GTTTGAGAGTTTTGTAGAGG+AGG | - | chr1.3:72616920-72616939 | MS.gene91331:intron | 40.0% |
!! | TGGAGTTTTTCGGAGTAAAG+GGG | - | chr1.3:72617057-72617076 | MS.gene91331:intron | 40.0% |
!! | TTGAGAGTTTTGTAGAGGAG+GGG | - | chr1.3:72616922-72616941 | MS.gene91331:intron | 40.0% |
!!! | ACAGGCAAACCGTCATTTTT+GGG | - | chr1.3:72619134-72619153 | MS.gene91331:intron | 40.0% |
!!! | GTGACAGGTTTTTGTTTTGG+CGG | - | chr1.3:72620899-72620918 | MS.gene91331:CDS | 40.0% |
AAATGGAGCATACATGCGCT+CGG | + | chr1.3:72617429-72617448 | None:intergenic | 45.0% | |
AACGATGGACAAGAGATGCA+AGG | - | chr1.3:72620008-72620027 | MS.gene91331:intron | 45.0% | |
AAGACGAAGGAAAGCTAAGG+AGG | - | chr1.3:72616837-72616856 | MS.gene91331:intron | 45.0% | |
AATGAGGTAAATGGAGCTGG+TGG | + | chr1.3:72617453-72617472 | None:intergenic | 45.0% | |
AATGGGCATGGGCTTATGTT+CGG | - | chr1.3:72619498-72619517 | MS.gene91331:intron | 45.0% | |
ACACCAGCGATTGAGATGAA+CGG | + | chr1.3:72617696-72617715 | None:intergenic | 45.0% | |
ACAGCACCAAAATCCACACA+AGG | + | chr1.3:72620927-72620946 | None:intergenic | 45.0% | |
AGACAACGGTTACCAGAAGA+GGG | + | chr1.3:72617768-72617787 | None:intergenic | 45.0% | |
AGACGAAGGAAAGCTAAGGA+GGG | - | chr1.3:72616838-72616857 | MS.gene91331:intron | 45.0% | |
AGCATGCATAGATCTACTCG+AGG | - | chr1.3:72619379-72619398 | MS.gene91331:intron | 45.0% | |
ATGCATAGATCTACTCGAGG+AGG | - | chr1.3:72619382-72619401 | MS.gene91331:intron | 45.0% | |
ATTGAGCAACCCGAACAAGT+GGG | - | chr1.3:72616313-72616332 | MS.gene91331:CDS | 45.0% | |
CACAACTCTTAGGGGTTGTT+TGG | - | chr1.3:72616898-72616917 | MS.gene91331:intron | 45.0% | |
CGACCTTTGGGTGTATTTGT+TGG | - | chr1.3:72619100-72619119 | MS.gene91331:intron | 45.0% | |
CTCATCCAAGACCCTAAATG+AGG | + | chr1.3:72617469-72617488 | None:intergenic | 45.0% | |
CTCTCATATCCCCACTTGTT+CGG | + | chr1.3:72616326-72616345 | None:intergenic | 45.0% | |
CTTATGCCTCCTGTTTCATC+AGG | + | chr1.3:72616443-72616462 | None:intergenic | 45.0% | |
GACAACAACATAGACACCGT+TGG | - | chr1.3:72620179-72620198 | MS.gene91331:intron | 45.0% | |
GACAAGACGAAGGAAAGCTA+AGG | - | chr1.3:72616834-72616853 | MS.gene91331:intron | 45.0% | |
GAGATGAACGGCAGAACAAT+CGG | + | chr1.3:72617684-72617703 | None:intergenic | 45.0% | |
GCAAAGGAGAGGATGGTAAT+GGG | - | chr1.3:72619857-72619876 | MS.gene91331:intron | 45.0% | |
GGAAGTAATCAAGGTTGGAG+TGG | - | chr1.3:72620034-72620053 | MS.gene91331:intron | 45.0% | |
GGGAATGCAGTTTGAATCTG+AGG | - | chr1.3:72618392-72618411 | MS.gene91331:intron | 45.0% | |
GTGTTTGATTCACAAGGGGA+AGG | + | chr1.3:72617387-72617406 | None:intergenic | 45.0% | |
TATATCCAAGCAAGCTGGTG+GGG | - | chr1.3:72618811-72618830 | MS.gene91331:CDS | 45.0% | |
TCAAACTGCATTCCCAAGTG+AGG | + | chr1.3:72618387-72618406 | None:intergenic | 45.0% | |
TCTCATATCCCCACTTGTTC+GGG | + | chr1.3:72616325-72616344 | None:intergenic | 45.0% | |
TGACAAAAGACGTCAACCGA+CGG | - | chr1.3:72618554-72618573 | MS.gene91331:CDS | 45.0% | |
TGAGTGACACGTGGCAAAAA+TGG | - | chr1.3:72617485-72617504 | MS.gene91331:CDS | 45.0% | |
TGCAAAGGAGAGGATGGTAA+TGG | - | chr1.3:72619856-72619875 | MS.gene91331:intron | 45.0% | |
TGTTATTGTTGTGTGGCTGC+TGG | - | chr1.3:72621006-72621025 | MS.gene91331:CDS | 45.0% | |
! | CGTGGGTATTGTGCATTTAC+TGG | - | chr1.3:72618022-72618041 | MS.gene91331:intron | 45.0% |
! | CTGATGAAACAGGAGGCATA+AGG | - | chr1.3:72616441-72616460 | MS.gene91331:CDS | 45.0% |
! | CTTGGCTTGATTGTGTTGCT+TGG | + | chr1.3:72620499-72620518 | None:intergenic | 45.0% |
! | GGCAAAAGGCATAAAGACGA+AGG | - | chr1.3:72620205-72620224 | MS.gene91331:intron | 45.0% |
! | TATGCCTTTTGCCTTGCCAA+CGG | + | chr1.3:72620198-72620217 | None:intergenic | 45.0% |
! | TGCCTCAGATATGTGTCGAT+GGG | + | chr1.3:72618727-72618746 | None:intergenic | 45.0% |
!! | AAAGAGTTCGCGATTCGGTT+TGG | - | chr1.3:72619349-72619368 | MS.gene91331:intron | 45.0% |
!! | CACAGGCAAACCGTCATTTT+TGG | - | chr1.3:72619133-72619152 | MS.gene91331:intron | 45.0% |
!! | GGAGTTTTTCGGAGTAAAGG+GGG | - | chr1.3:72617058-72617077 | MS.gene91331:intron | 45.0% |
!!! | CAGGCAAACCGTCATTTTTG+GGG | - | chr1.3:72619135-72619154 | MS.gene91331:intron | 45.0% |
!! | TTAATTAAAAAAAACATTAA+AGG | - | chr1.3:72617549-72617568 | MS.gene91331:CDS | 5.0% |
!!! | AAAATTATAATATATTTTAC+AGG | - | chr1.3:72616759-72616778 | MS.gene91331:intron | 5.0% |
!!! | AATTAATCTAAAAATAATTT+TGG | + | chr1.3:72617112-72617131 | None:intergenic | 5.0% |
AATAGGATGCACAGCGCGTA+TGG | - | chr1.3:72618599-72618618 | MS.gene91331:CDS | 50.0% | |
AGGGAAACGAAGAGGTTCTG+AGG | + | chr1.3:72617641-72617660 | None:intergenic | 50.0% | |
AGGGAAGGAAAGAGGAGATG+AGG | - | chr1.3:72616992-72617011 | MS.gene91331:intron | 50.0% | |
ATGAACGGCAGAACAATCGG+CGG | + | chr1.3:72617681-72617700 | None:intergenic | 50.0% | |
ATGGACAAGAGATGCAAGGC+TGG | - | chr1.3:72620012-72620031 | MS.gene91331:intron | 50.0% | |
CAACATAGACACCGTTGGCA+AGG | - | chr1.3:72620184-72620203 | MS.gene91331:intron | 50.0% | |
CATACTCAGGTGGAACCAGA+AGG | + | chr1.3:72618689-72618708 | None:intergenic | 50.0% | |
CATTGAGCAACCCGAACAAG+TGG | - | chr1.3:72616312-72616331 | MS.gene91331:CDS | 50.0% | |
CTCCCATCGACACATATCTG+AGG | - | chr1.3:72618722-72618741 | MS.gene91331:CDS | 50.0% | |
CTGATGAGAGGGAAACGAAG+AGG | + | chr1.3:72617649-72617668 | None:intergenic | 50.0% | |
CTTCCAGCTCCTGATGAAAC+AGG | - | chr1.3:72616431-72616450 | MS.gene91331:CDS | 50.0% | |
GACAACGGTTACCAGAAGAG+GGG | + | chr1.3:72617767-72617786 | None:intergenic | 50.0% | |
GAGACAACGGTTACCAGAAG+AGG | + | chr1.3:72617769-72617788 | None:intergenic | 50.0% | |
GCAAGGCTGGGAAGTAATCA+AGG | - | chr1.3:72620025-72620044 | MS.gene91331:intron | 50.0% | |
GGCTGGGAAGTAATCAAGGT+TGG | - | chr1.3:72620029-72620048 | MS.gene91331:intron | 50.0% | |
GGGAAGGAAAGAGGAGATGA+GGG | - | chr1.3:72616993-72617012 | MS.gene91331:intron | 50.0% | |
GTAATCAAGGTTGGAGTGGG+AGG | - | chr1.3:72620038-72620057 | MS.gene91331:intron | 50.0% | |
GTGCCTCAGATATGTGTCGA+TGG | + | chr1.3:72618728-72618747 | None:intergenic | 50.0% | |
GTTCGGAAAACATTCACGGC+AGG | - | chr1.3:72619515-72619534 | MS.gene91331:intron | 50.0% | |
TCCCAAGTGAGGTCCACTAT+TGG | + | chr1.3:72618376-72618395 | None:intergenic | 50.0% | |
TCTGGTGTGGTGCACACAAT+TGG | - | chr1.3:72621047-72621066 | MS.gene91331:CDS | 50.0% | |
TGGACAAGAGATGCAAGGCT+GGG | - | chr1.3:72620013-72620032 | MS.gene91331:intron | 50.0% | |
TTGAGCAACCCGAACAAGTG+GGG | - | chr1.3:72616314-72616333 | MS.gene91331:CDS | 50.0% | |
! | GCGGATCCTTGTGTGGATTT+TGG | - | chr1.3:72620918-72620937 | MS.gene91331:CDS | 50.0% |
! | GGGAAACGAAGAGGTTCTGA+GGG | + | chr1.3:72617640-72617659 | None:intergenic | 50.0% |
! | TAGCGAGGCTTTGGTATGCT+CGG | - | chr1.3:72621087-72621106 | MS.gene91331:CDS | 50.0% |
! | TGTGTGTCACTGCACAGTTC+TGG | - | chr1.3:72621029-72621048 | MS.gene91331:CDS | 50.0% |
!! | AGAGTTTTGTAGAGGAGGGG+AGG | - | chr1.3:72616925-72616944 | MS.gene91331:intron | 50.0% |
!! | GAGTTTTGTAGAGGAGGGGA+GGG | - | chr1.3:72616926-72616945 | MS.gene91331:intron | 50.0% |
!! | GCCAATAGTGGACCTCACTT+GGG | - | chr1.3:72618372-72618391 | MS.gene91331:intron | 50.0% |
!! | GTTTTTCGGAGTAAAGGGGG+AGG | - | chr1.3:72617061-72617080 | MS.gene91331:intron | 50.0% |
!! | TGCCAATAGTGGACCTCACT+TGG | - | chr1.3:72618371-72618390 | MS.gene91331:intron | 50.0% |
!!! | TGTTTTGGCGGATCCTTGTG+TGG | - | chr1.3:72620911-72620930 | MS.gene91331:CDS | 50.0% |
AAACGACGGCGACGAGACAA+CGG | + | chr1.3:72617782-72617801 | None:intergenic | 55.0% | |
ACGCGCTGTGCATCCTATTC+TGG | + | chr1.3:72618598-72618617 | None:intergenic | 55.0% | |
ACTCAGGTGGAACCAGAAGG+TGG | + | chr1.3:72618686-72618705 | None:intergenic | 55.0% | |
CAAAAGACGTCAACCGACGG+CGG | - | chr1.3:72618557-72618576 | MS.gene91331:CDS | 55.0% | |
CCAGCTCCTGATGAAACAGG+AGG | - | chr1.3:72616434-72616453 | MS.gene91331:CDS | 55.0% | |
CCTCCTGTTTCATCAGGAGC+TGG | + | chr1.3:72616437-72616456 | None:intergenic | 55.0% | |
CTGCCGTTCATCTCAATCGC+TGG | - | chr1.3:72617690-72617709 | MS.gene91331:CDS | 55.0% | |
GACACCGTTGGCAAGGCAAA+AGG | - | chr1.3:72620191-72620210 | MS.gene91331:intron | 55.0% | |
GAGCTTCCTCCACCAGAACA+AGG | + | chr1.3:72620974-72620993 | None:intergenic | 55.0% | |
GCAGAACAATCGGCGGTTGT+TGG | + | chr1.3:72617674-72617693 | None:intergenic | 55.0% | |
GCTGGTGGGGTAGAGATTGT+CGG | - | chr1.3:72618824-72618843 | MS.gene91331:intron | 55.0% | |
GGTCTTGGATGAGTGACACG+TGG | - | chr1.3:72617476-72617495 | MS.gene91331:CDS | 55.0% | |
TATGCTCGGCTGGGACTTGT+TGG | - | chr1.3:72621101-72621120 | MS.gene91331:CDS | 55.0% | |
TGTTTAGGGGGCTGTTAGCG+AGG | - | chr1.3:72621072-72621091 | MS.gene91331:CDS | 55.0% | |
! | AGGCTTTGGTATGCTCGGCT+GGG | - | chr1.3:72621092-72621111 | MS.gene91331:CDS | 55.0% |
! | ATGCTCGGCTGGGACTTGTT+GGG | - | chr1.3:72621102-72621121 | MS.gene91331:CDS | 55.0% |
! | CAGGAGGCATAAGGGTCGAT+TGG | - | chr1.3:72616450-72616469 | MS.gene91331:intron | 55.0% |
! | GCAGTTTGAATCTGAGGCGG+TGG | - | chr1.3:72618398-72618417 | MS.gene91331:intron | 55.0% |
! | GTCACTGCACAGTTCTGGTG+TGG | - | chr1.3:72621034-72621053 | MS.gene91331:CDS | 55.0% |
!! | GGTTGTTGGCGCTGATGAGA+GGG | + | chr1.3:72617660-72617679 | None:intergenic | 55.0% |
ACAGCGGCTGCTCCTTGTTC+TGG | - | chr1.3:72620959-72620978 | MS.gene91331:CDS | 60.0% | |
AGAGGGGACGATGCATGGAG+TGG | + | chr1.3:72617751-72617770 | None:intergenic | 60.0% | |
CCAGAAGAGGGGACGATGCA+TGG | + | chr1.3:72617756-72617775 | None:intergenic | 60.0% | |
CCATGCATCGTCCCCTCTTC+TGG | - | chr1.3:72617753-72617772 | MS.gene91331:CDS | 60.0% | |
GCTGCTCCTTGTTCTGGTGG+AGG | - | chr1.3:72620965-72620984 | MS.gene91331:CDS | 60.0% | |
GGACGATGCATGGAGTGGAG+CGG | + | chr1.3:72617746-72617765 | None:intergenic | 60.0% | |
! | CTCTACCCCACCAGCTTGCT+TGG | + | chr1.3:72618819-72618838 | None:intergenic | 60.0% |
! | GAGGCTTTGGTATGCTCGGC+TGG | - | chr1.3:72621091-72621110 | MS.gene91331:CDS | 60.0% |
! | TCTGCTCTAGACTCCGCCGT+CGG | + | chr1.3:72618573-72618592 | None:intergenic | 60.0% |
!! | CGGTTGTTGGCGCTGATGAG+AGG | + | chr1.3:72617661-72617680 | None:intergenic | 60.0% |
CGATGCATGGAGTGGAGCGG+AGG | + | chr1.3:72617743-72617762 | None:intergenic | 65.0% | |
GCGGCTGCTCCTTGTTCTGG+TGG | - | chr1.3:72620962-72620981 | MS.gene91331:CDS | 65.0% | |
GGGGGCTGTTAGCGAGGCTT+TGG | - | chr1.3:72621078-72621097 | MS.gene91331:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 72616233 | 72621139 | 72616233 | ID=MS.gene91331 |
chr1.3 | mRNA | 72616233 | 72621139 | 72616233 | ID=MS.gene91331.t1;Parent=MS.gene91331 |
chr1.3 | exon | 72620876 | 72621139 | 72620876 | ID=MS.gene91331.t1.exon1;Parent=MS.gene91331.t1 |
chr1.3 | CDS | 72620876 | 72621139 | 72620876 | ID=cds.MS.gene91331.t1;Parent=MS.gene91331.t1 |
chr1.3 | exon | 72619538 | 72619703 | 72619538 | ID=MS.gene91331.t1.exon2;Parent=MS.gene91331.t1 |
chr1.3 | CDS | 72619538 | 72619703 | 72619538 | ID=cds.MS.gene91331.t1;Parent=MS.gene91331.t1 |
chr1.3 | exon | 72618910 | 72619092 | 72618910 | ID=MS.gene91331.t1.exon3;Parent=MS.gene91331.t1 |
chr1.3 | CDS | 72618910 | 72619092 | 72618910 | ID=cds.MS.gene91331.t1;Parent=MS.gene91331.t1 |
chr1.3 | exon | 72618545 | 72618834 | 72618545 | ID=MS.gene91331.t1.exon4;Parent=MS.gene91331.t1 |
chr1.3 | CDS | 72618545 | 72618834 | 72618545 | ID=cds.MS.gene91331.t1;Parent=MS.gene91331.t1 |
chr1.3 | exon | 72617224 | 72618019 | 72617224 | ID=MS.gene91331.t1.exon5;Parent=MS.gene91331.t1 |
chr1.3 | CDS | 72617224 | 72618019 | 72617224 | ID=cds.MS.gene91331.t1;Parent=MS.gene91331.t1 |
chr1.3 | exon | 72616844 | 72616903 | 72616844 | ID=MS.gene91331.t1.exon6;Parent=MS.gene91331.t1 |
chr1.3 | CDS | 72616844 | 72616903 | 72616844 | ID=cds.MS.gene91331.t1;Parent=MS.gene91331.t1 |
chr1.3 | exon | 72616617 | 72616621 | 72616617 | ID=MS.gene91331.t1.exon7;Parent=MS.gene91331.t1 |
chr1.3 | CDS | 72616617 | 72616621 | 72616617 | ID=cds.MS.gene91331.t1;Parent=MS.gene91331.t1 |
chr1.3 | exon | 72616233 | 72616466 | 72616233 | ID=MS.gene91331.t1.exon8;Parent=MS.gene91331.t1 |
chr1.3 | CDS | 72616233 | 72616466 | 72616233 | ID=cds.MS.gene91331.t1;Parent=MS.gene91331.t1 |
Gene Sequence |
Protein sequence |