Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91419.t1 | AES62696.1 | 73.6 | 87 | 18 | 1 | 1 | 82 | 1 | 87 | 3.30E-24 | 121.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91419.t1 | O48686 | 51.2 | 80 | 35 | 1 | 4 | 79 | 3 | 82 | 3.7e-16 | 85.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91419.t1 | G7IE26 | 73.6 | 87 | 18 | 1 | 1 | 82 | 1 | 87 | 2.4e-24 | 121.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene91419.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91419.t1 | MTR_1g105010 | 69.600 | 125 | 27 | 3 | 1 | 120 | 1 | 119 | 1.91e-50 | 156 |
| MS.gene91419.t1 | MTR_1g105960 | 45.783 | 83 | 40 | 1 | 12 | 94 | 2 | 79 | 1.04e-20 | 80.9 |
| MS.gene91419.t1 | MTR_8g062700 | 49.367 | 79 | 40 | 0 | 1 | 79 | 32 | 110 | 4.97e-20 | 85.1 |
| MS.gene91419.t1 | MTR_1g104940 | 47.368 | 76 | 40 | 0 | 4 | 79 | 7 | 82 | 5.13e-20 | 79.7 |
| MS.gene91419.t1 | MTR_1g105955 | 54.930 | 71 | 32 | 0 | 8 | 78 | 13 | 83 | 5.16e-20 | 81.3 |
| MS.gene91419.t1 | MTR_1g105955 | 54.286 | 70 | 32 | 0 | 10 | 79 | 94 | 163 | 2.47e-18 | 76.6 |
| MS.gene91419.t1 | MTR_8g062700 | 49.367 | 79 | 40 | 0 | 1 | 79 | 32 | 110 | 5.22e-20 | 84.7 |
| MS.gene91419.t1 | MTR_5g036670 | 49.315 | 73 | 37 | 0 | 7 | 79 | 39 | 111 | 8.52e-19 | 81.3 |
| MS.gene91419.t1 | MTR_1g104937 | 53.623 | 69 | 32 | 0 | 11 | 79 | 12 | 80 | 1.51e-18 | 75.5 |
| MS.gene91419.t1 | MTR_6g008970 | 44.444 | 90 | 43 | 2 | 7 | 96 | 59 | 141 | 3.37e-18 | 79.7 |
| MS.gene91419.t1 | MTR_7g089490 | 49.275 | 69 | 35 | 0 | 11 | 79 | 16 | 84 | 7.05e-18 | 73.9 |
| MS.gene91419.t1 | MTR_1g104960 | 51.429 | 70 | 34 | 0 | 10 | 79 | 98 | 167 | 9.91e-18 | 75.1 |
| MS.gene91419.t1 | MTR_1g104960 | 48.649 | 74 | 38 | 0 | 6 | 79 | 8 | 81 | 7.92e-14 | 65.1 |
| MS.gene91419.t1 | MTR_3g006125 | 45.882 | 85 | 41 | 2 | 4 | 83 | 173 | 257 | 3.32e-16 | 72.4 |
| MS.gene91419.t1 | MTR_3g006065 | 51.515 | 66 | 31 | 1 | 10 | 74 | 89 | 154 | 3.69e-15 | 68.6 |
| MS.gene91419.t1 | MTR_6g008995 | 41.026 | 78 | 46 | 0 | 7 | 84 | 33 | 110 | 5.09e-15 | 70.5 |
| MS.gene91419.t1 | MTR_3g006185 | 44.186 | 86 | 43 | 2 | 3 | 83 | 90 | 175 | 6.93e-15 | 67.8 |
| MS.gene91419.t1 | MTR_8g062350 | 44.000 | 75 | 42 | 0 | 4 | 78 | 7 | 81 | 1.54e-14 | 67.4 |
| MS.gene91419.t1 | MTR_3g006150 | 51.515 | 66 | 31 | 1 | 10 | 74 | 89 | 154 | 1.87e-14 | 66.2 |
| MS.gene91419.t1 | MTR_3g006150 | 40.845 | 71 | 39 | 1 | 8 | 78 | 5 | 72 | 9.73e-11 | 56.6 |
| MS.gene91419.t1 | MTR_7g013410 | 46.774 | 62 | 33 | 0 | 18 | 79 | 5 | 66 | 3.96e-14 | 64.7 |
| MS.gene91419.t1 | MTR_4g133300 | 47.945 | 73 | 38 | 0 | 7 | 79 | 85 | 157 | 1.11e-13 | 65.9 |
| MS.gene91419.t1 | MTR_4g133300 | 46.970 | 66 | 35 | 0 | 14 | 79 | 175 | 240 | 1.83e-13 | 65.1 |
| MS.gene91419.t1 | MTR_4g133300 | 53.846 | 52 | 24 | 0 | 27 | 78 | 25 | 76 | 3.87e-11 | 58.9 |
| MS.gene91419.t1 | MTR_4g133470 | 46.970 | 66 | 35 | 0 | 14 | 79 | 175 | 240 | 1.15e-13 | 65.5 |
| MS.gene91419.t1 | MTR_4g133470 | 46.575 | 73 | 39 | 0 | 7 | 79 | 85 | 157 | 8.99e-13 | 63.2 |
| MS.gene91419.t1 | MTR_4g133470 | 53.846 | 52 | 24 | 0 | 27 | 78 | 25 | 76 | 3.30e-11 | 58.9 |
| MS.gene91419.t1 | MTR_1g091047 | 49.231 | 65 | 32 | 1 | 10 | 73 | 8 | 72 | 1.22e-13 | 62.0 |
| MS.gene91419.t1 | MTR_1g104980 | 48.485 | 66 | 34 | 0 | 13 | 78 | 1 | 66 | 2.48e-13 | 63.5 |
| MS.gene91419.t1 | MTR_1g104980 | 48.485 | 66 | 34 | 0 | 14 | 79 | 73 | 138 | 6.89e-13 | 62.4 |
| MS.gene91419.t1 | MTR_3g006000 | 52.239 | 67 | 29 | 3 | 10 | 74 | 6 | 71 | 1.10e-12 | 59.7 |
| MS.gene91419.t1 | MTR_1g093310 | 41.667 | 72 | 36 | 1 | 8 | 79 | 6 | 71 | 2.52e-12 | 58.5 |
| MS.gene91419.t1 | MTR_1g109550 | 47.541 | 61 | 31 | 1 | 18 | 78 | 23 | 82 | 3.72e-12 | 59.7 |
| MS.gene91419.t1 | MTR_7g013380 | 44.286 | 70 | 37 | 1 | 11 | 78 | 185 | 254 | 7.29e-12 | 61.2 |
| MS.gene91419.t1 | MTR_7g013380 | 44.615 | 65 | 34 | 1 | 11 | 73 | 99 | 163 | 1.30e-11 | 60.5 |
| MS.gene91419.t1 | MTR_7g013380 | 46.875 | 64 | 32 | 1 | 12 | 73 | 14 | 77 | 2.15e-11 | 59.7 |
| MS.gene91419.t1 | MTR_3g006105 | 42.857 | 77 | 43 | 1 | 4 | 79 | 92 | 168 | 7.77e-12 | 59.7 |
| MS.gene91419.t1 | MTR_3g006105 | 38.554 | 83 | 50 | 1 | 11 | 92 | 8 | 90 | 2.50e-11 | 58.5 |
| MS.gene91419.t1 | MTR_2g097830 | 44.048 | 84 | 40 | 2 | 10 | 89 | 69 | 149 | 8.36e-12 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91419.t1 | AT1G24190 | 51.250 | 80 | 35 | 1 | 4 | 79 | 3 | 82 | 3.09e-21 | 88.6 |
| MS.gene91419.t1 | AT1G24190 | 51.250 | 80 | 35 | 1 | 4 | 79 | 3 | 82 | 3.25e-21 | 88.6 |
| MS.gene91419.t1 | AT1G24190 | 51.250 | 80 | 35 | 1 | 4 | 79 | 3 | 82 | 3.28e-21 | 88.6 |
| MS.gene91419.t1 | AT1G70060 | 52.055 | 73 | 35 | 0 | 7 | 79 | 10 | 82 | 1.33e-19 | 84.0 |
| MS.gene91419.t1 | AT1G70060 | 52.055 | 73 | 35 | 0 | 7 | 79 | 10 | 82 | 1.33e-19 | 84.0 |
| MS.gene91419.t1 | AT3G01320 | 47.945 | 73 | 38 | 0 | 7 | 79 | 53 | 125 | 2.58e-19 | 82.8 |
| MS.gene91419.t1 | AT3G01320 | 47.945 | 73 | 38 | 0 | 7 | 79 | 53 | 125 | 2.60e-19 | 82.8 |
| MS.gene91419.t1 | AT1G24200 | 37.302 | 126 | 67 | 4 | 8 | 129 | 11 | 128 | 3.14e-18 | 77.0 |
| MS.gene91419.t1 | AT5G15020 | 45.333 | 75 | 41 | 0 | 7 | 81 | 48 | 122 | 4.54e-18 | 79.3 |
| MS.gene91419.t1 | AT5G15020 | 45.333 | 75 | 41 | 0 | 7 | 81 | 48 | 122 | 4.72e-18 | 79.3 |
| MS.gene91419.t1 | AT4G12020 | 46.667 | 75 | 39 | 1 | 5 | 79 | 302 | 375 | 1.34e-15 | 72.4 |
| MS.gene91419.t1 | AT4G12020 | 46.667 | 75 | 39 | 1 | 5 | 79 | 302 | 375 | 1.39e-15 | 72.4 |
| MS.gene91419.t1 | AT4G12020 | 46.667 | 75 | 39 | 1 | 5 | 79 | 302 | 375 | 1.40e-15 | 72.4 |
| MS.gene91419.t1 | AT4G12020 | 46.667 | 75 | 39 | 1 | 5 | 79 | 302 | 375 | 1.40e-15 | 72.4 |
| MS.gene91419.t1 | AT4G12020 | 46.667 | 75 | 39 | 1 | 5 | 79 | 302 | 375 | 1.42e-15 | 72.4 |
| MS.gene91419.t1 | AT4G12020 | 46.667 | 75 | 39 | 1 | 5 | 79 | 302 | 375 | 1.43e-15 | 72.4 |
| MS.gene91419.t1 | AT4G12020 | 46.667 | 75 | 39 | 1 | 5 | 79 | 235 | 308 | 1.46e-15 | 72.4 |
| MS.gene91419.t1 | AT4G12020 | 46.667 | 75 | 39 | 1 | 5 | 79 | 302 | 375 | 1.46e-15 | 72.4 |
| MS.gene91419.t1 | AT4G12020 | 46.667 | 75 | 39 | 1 | 5 | 79 | 302 | 375 | 1.48e-15 | 72.4 |
| MS.gene91419.t1 | AT4G12020 | 46.667 | 75 | 39 | 1 | 5 | 79 | 302 | 375 | 1.48e-15 | 72.4 |
| MS.gene91419.t1 | AT4G12020 | 46.667 | 75 | 39 | 1 | 5 | 79 | 302 | 375 | 1.49e-15 | 72.4 |
| MS.gene91419.t1 | AT1G27250 | 40.541 | 74 | 44 | 0 | 7 | 80 | 17 | 90 | 1.86e-15 | 68.2 |
| MS.gene91419.t1 | AT1G59890 | 44.928 | 69 | 38 | 0 | 11 | 79 | 45 | 113 | 2.67e-15 | 71.6 |
| MS.gene91419.t1 | AT1G59890 | 44.928 | 69 | 38 | 0 | 11 | 79 | 45 | 113 | 2.70e-15 | 71.6 |
| MS.gene91419.t1 | AT1G59890 | 44.928 | 69 | 38 | 0 | 11 | 79 | 45 | 113 | 2.72e-15 | 71.6 |
| MS.gene91419.t1 | AT1G59890 | 44.928 | 69 | 38 | 0 | 11 | 79 | 45 | 113 | 2.75e-15 | 71.6 |
| MS.gene91419.t1 | AT5G15025 | 38.158 | 76 | 47 | 0 | 6 | 81 | 42 | 117 | 1.52e-14 | 65.5 |
| MS.gene91419.t1 | AT1G70030 | 41.558 | 77 | 43 | 1 | 7 | 81 | 18 | 94 | 3.61e-14 | 64.7 |
| MS.gene91419.t1 | AT1G70030 | 32.812 | 128 | 73 | 4 | 7 | 129 | 7 | 126 | 4.31e-14 | 65.5 |
| MS.gene91419.t1 | AT1G70030 | 41.558 | 77 | 43 | 1 | 7 | 81 | 18 | 94 | 7.46e-14 | 64.3 |
| MS.gene91419.t1 | AT1G27220 | 36.486 | 74 | 47 | 0 | 7 | 80 | 10 | 83 | 1.42e-12 | 61.6 |
| MS.gene91419.t1 | AT1G10450 | 40.580 | 69 | 41 | 0 | 11 | 79 | 33 | 101 | 2.19e-12 | 63.2 |
| MS.gene91419.t1 | AT1G10450 | 40.580 | 69 | 41 | 0 | 11 | 79 | 33 | 101 | 2.19e-12 | 63.2 |
| MS.gene91419.t1 | AT1G23810 | 42.188 | 64 | 37 | 0 | 8 | 71 | 106 | 169 | 2.30e-12 | 62.0 |
| MS.gene91419.t1 | AT1G10450 | 40.580 | 69 | 41 | 0 | 11 | 79 | 84 | 152 | 2.33e-12 | 63.2 |
| MS.gene91419.t1 | AT1G27280 | 38.571 | 70 | 43 | 0 | 8 | 77 | 78 | 147 | 3.24e-12 | 61.6 |
| MS.gene91419.t1 | AT1G24230 | 43.478 | 69 | 38 | 1 | 6 | 73 | 9 | 77 | 4.36e-12 | 61.2 |
| MS.gene91419.t1 | AT1G24210 | 40.000 | 75 | 44 | 1 | 6 | 80 | 9 | 82 | 2.08e-11 | 58.2 |
| MS.gene91419.t1 | AT1G24250 | 42.188 | 64 | 37 | 0 | 8 | 71 | 117 | 180 | 2.39e-11 | 59.3 |
| MS.gene91419.t1 | AT5G15040 | 39.437 | 71 | 43 | 0 | 11 | 81 | 3 | 73 | 4.84e-11 | 55.5 |
| MS.gene91419.t1 | AT5G15040 | 39.437 | 71 | 43 | 0 | 11 | 81 | 3 | 73 | 4.84e-11 | 55.5 |
| MS.gene91419.t1 | AT5G15040 | 39.437 | 71 | 43 | 0 | 11 | 81 | 3 | 73 | 4.84e-11 | 55.5 |
Find 27 sgRNAs with CRISPR-Local
Find 41 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATAAAATATTAGAGATTT+TGG | 0.199052 | 1.3:-71714697 | MS.gene91419:CDS |
| TGAAAGTCCTAAGCGATTAC+AGG | 0.315902 | 1.3:-71714947 | MS.gene91419:CDS |
| AGGATGGAGGAGCTGTTTAA+AGG | 0.330709 | 1.3:-71714891 | MS.gene91419:CDS |
| CTCTTGGCAATGCAGGATAA+AGG | 0.369224 | 1.3:-71715059 | MS.gene91419:intron |
| AAGAACCCACCTGATCGAAT+AGG | 0.409769 | 1.3:-71714771 | MS.gene91419:CDS |
| AAACGCTATTGCTTCTTCCT+TGG | 0.431429 | 1.3:+71715025 | None:intergenic |
| CAGTGATGACACTGGAGAAA+AGG | 0.440953 | 1.3:-71714814 | MS.gene91419:CDS |
| TCACTGATTTGAGATGGCTT+TGG | 0.444928 | 1.3:+71714831 | None:intergenic |
| GGATGGAGGAGCTGTTTAAA+GGG | 0.456905 | 1.3:-71714890 | MS.gene91419:CDS |
| AGAACCCACCTGATCGAATA+GGG | 0.457483 | 1.3:-71714770 | MS.gene91419:CDS |
| ATTTGCGACCCTATTCGATC+AGG | 0.474283 | 1.3:+71714762 | None:intergenic |
| TTGAGATGGCTTTGGCGTAA+AGG | 0.479351 | 1.3:+71714839 | None:intergenic |
| AGTTAAACTTCTGTCTCAAA+AGG | 0.482056 | 1.3:-71714721 | MS.gene91419:CDS |
| TGCGACCCTATTCGATCAGG+TGG | 0.509774 | 1.3:+71714765 | None:intergenic |
| GCTAAAAGAATTGATATAGC+AGG | 0.520011 | 1.3:-71714924 | MS.gene91419:CDS |
| GTGTCATCACTGATTTGAGA+TGG | 0.558119 | 1.3:+71714825 | None:intergenic |
| GAAAGTCCTAAGCGATTACA+GGG | 0.564984 | 1.3:-71714946 | MS.gene91419:CDS |
| AGTTAAGTTTCAAGACAAGA+GGG | 0.571152 | 1.3:-71714988 | MS.gene91419:CDS |
| AAGTTAAGTTTCAAGACAAG+AGG | 0.577150 | 1.3:-71714989 | MS.gene91419:CDS |
| AGCAGGTGTGACAACAAGGA+TGG | 0.585519 | 1.3:-71714907 | MS.gene91419:CDS |
| GCGACCCTATTCGATCAGGT+GGG | 0.613931 | 1.3:+71714766 | None:intergenic |
| ATATAGCAGGTGTGACAACA+AGG | 0.623415 | 1.3:-71714911 | MS.gene91419:CDS |
| TCTCAAATCAGTGATGACAC+TGG | 0.643527 | 1.3:-71714822 | MS.gene91419:CDS |
| AGGTGTGACAACAAGGATGG+AGG | 0.648111 | 1.3:-71714904 | MS.gene91419:CDS |
| TAAAGGTGGTGGTGTAACCA+AGG | 0.651615 | 1.3:-71715042 | MS.gene91419:CDS |
| GCAATGCAGGATAAAGGTGG+TGG | 0.669430 | 1.3:-71715053 | MS.gene91419:intron |
| TTGGCAATGCAGGATAAAGG+TGG | 0.685630 | 1.3:-71715056 | MS.gene91419:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTTAATAAATTAATTTCTCT+TGG | - | chr1.3:71714918-71714937 | MS.gene91419:CDS | 15.0% |
| !!! | TGATAAAATATTAGAGATTT+TGG | - | chr1.3:71715296-71715315 | MS.gene91419:intron | 15.0% |
| !!! | TAAAATATTAGAGATTTTGG+AGG | - | chr1.3:71715299-71715318 | MS.gene91419:intron | 20.0% |
| !!! | TTATTTTTTCCTTCCAATTT+TGG | - | chr1.3:71714700-71714719 | MS.gene91419:CDS | 20.0% |
| !!! | TTTTTTTTGAGAGATTGAAT+TGG | - | chr1.3:71714751-71714770 | MS.gene91419:CDS | 20.0% |
| ! | AGGAGTTTAATTAGTATGAT+AGG | + | chr1.3:71714875-71714894 | None:intergenic | 25.0% |
| ! | ATTCAAAACAAAGCCAAAAT+TGG | + | chr1.3:71714716-71714735 | None:intergenic | 25.0% |
| ! | CATATACATGTATAATGTGT+TGG | - | chr1.3:71714804-71714823 | MS.gene91419:CDS | 25.0% |
| !!! | ATTTTGGCTTTGTTTTGAAT+TGG | - | chr1.3:71714716-71714735 | MS.gene91419:CDS | 25.0% |
| AAAACAAAGCCAAAATTGGA+AGG | + | chr1.3:71714712-71714731 | None:intergenic | 30.0% | |
| AAGTTAAGTTTCAAGACAAG+AGG | - | chr1.3:71715004-71715023 | MS.gene91419:CDS | 30.0% | |
| AGTTAAACTTCTGTCTCAAA+AGG | - | chr1.3:71715272-71715291 | MS.gene91419:intron | 30.0% | |
| AGTTAAGTTTCAAGACAAGA+GGG | - | chr1.3:71715005-71715024 | MS.gene91419:CDS | 30.0% | |
| GCTAAAAGAATTGATATAGC+AGG | - | chr1.3:71715069-71715088 | MS.gene91419:intron | 30.0% | |
| GGCATGTCAATCAATTAATA+TGG | - | chr1.3:71714825-71714844 | MS.gene91419:CDS | 30.0% | |
| GTAACAAGCATGTTTAATTC+AGG | + | chr1.3:71714895-71714914 | None:intergenic | 30.0% | |
| TTAATTTCTCTTGGCAATGC+AGG | - | chr1.3:71714927-71714946 | MS.gene91419:CDS | 35.0% | |
| AAACGCTATTGCTTCTTCCT+TGG | + | chr1.3:71714971-71714990 | None:intergenic | 40.0% | |
| ATATAGCAGGTGTGACAACA+AGG | - | chr1.3:71715082-71715101 | MS.gene91419:intron | 40.0% | |
| GAAAGTCCTAAGCGATTACA+GGG | - | chr1.3:71715047-71715066 | MS.gene91419:CDS | 40.0% | |
| TCTCAAATCAGTGATGACAC+TGG | - | chr1.3:71715171-71715190 | MS.gene91419:intron | 40.0% | |
| TGAAAGTCCTAAGCGATTAC+AGG | - | chr1.3:71715046-71715065 | MS.gene91419:CDS | 40.0% | |
| ! | TTTTAGCCCTGTAATCGCTT+AGG | + | chr1.3:71715056-71715075 | None:intergenic | 40.0% |
| !! | GTGTCATCACTGATTTGAGA+TGG | + | chr1.3:71715171-71715190 | None:intergenic | 40.0% |
| !! | TCACTGATTTGAGATGGCTT+TGG | + | chr1.3:71715165-71715184 | None:intergenic | 40.0% |
| AAGAACCCACCTGATCGAAT+AGG | - | chr1.3:71715222-71715241 | MS.gene91419:intron | 45.0% | |
| AGAACCCACCTGATCGAATA+GGG | - | chr1.3:71715223-71715242 | MS.gene91419:intron | 45.0% | |
| AGGATGGAGGAGCTGTTTAA+AGG | - | chr1.3:71715102-71715121 | MS.gene91419:intron | 45.0% | |
| ATTTGCGACCCTATTCGATC+AGG | + | chr1.3:71715234-71715253 | None:intergenic | 45.0% | |
| CAGTGATGACACTGGAGAAA+AGG | - | chr1.3:71715179-71715198 | MS.gene91419:intron | 45.0% | |
| CTCTTGGCAATGCAGGATAA+AGG | - | chr1.3:71714934-71714953 | MS.gene91419:CDS | 45.0% | |
| GGATGGAGGAGCTGTTTAAA+GGG | - | chr1.3:71715103-71715122 | MS.gene91419:intron | 45.0% | |
| TTGGCAATGCAGGATAAAGG+TGG | - | chr1.3:71714937-71714956 | MS.gene91419:CDS | 45.0% | |
| ! | TAAAGGTGGTGGTGTAACCA+AGG | - | chr1.3:71714951-71714970 | MS.gene91419:CDS | 45.0% |
| !! | TTGAGATGGCTTTGGCGTAA+AGG | + | chr1.3:71715157-71715176 | None:intergenic | 45.0% |
| AGCAGGTGTGACAACAAGGA+TGG | - | chr1.3:71715086-71715105 | MS.gene91419:intron | 50.0% | |
| AGGTGTGACAACAAGGATGG+AGG | - | chr1.3:71715089-71715108 | MS.gene91419:intron | 50.0% | |
| GCAATGCAGGATAAAGGTGG+TGG | - | chr1.3:71714940-71714959 | MS.gene91419:CDS | 50.0% | |
| GCGACCCTATTCGATCAGGT+GGG | + | chr1.3:71715230-71715249 | None:intergenic | 55.0% | |
| GGCAACACGTCACACATGCA+TGG | - | chr1.3:71714846-71714865 | MS.gene91419:CDS | 55.0% | |
| TGCGACCCTATTCGATCAGG+TGG | + | chr1.3:71715231-71715250 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 71714677 | 71715338 | 71714677 | ID=MS.gene91419 |
| chr1.3 | mRNA | 71714677 | 71715338 | 71714677 | ID=MS.gene91419.t1;Parent=MS.gene91419 |
| chr1.3 | exon | 71715336 | 71715338 | 71715336 | ID=MS.gene91419.t1.exon1;Parent=MS.gene91419.t1 |
| chr1.3 | CDS | 71715336 | 71715338 | 71715336 | ID=cds.MS.gene91419.t1;Parent=MS.gene91419.t1 |
| chr1.3 | exon | 71714677 | 71715066 | 71714677 | ID=MS.gene91419.t1.exon2;Parent=MS.gene91419.t1 |
| chr1.3 | CDS | 71714677 | 71715066 | 71714677 | ID=cds.MS.gene91419.t1;Parent=MS.gene91419.t1 |
| Gene Sequence |
| Protein sequence |
