Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92127.t1 | XP_024632961.1 | 87.9 | 713 | 74 | 3 | 1 | 701 | 81 | 793 | 0.00E+00 | 1269.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92127.t1 | Q9SZL8 | 26.4 | 598 | 374 | 10 | 6 | 601 | 104 | 637 | 2.9e-59 | 231.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92127.t1 | D3YBB9 | 79.5 | 709 | 125 | 4 | 2 | 700 | 114 | 812 | 0.0e+00 | 1133.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene92127.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92127.t1 | MTR_0558s0020 | 88.745 | 231 | 26 | 0 | 1 | 231 | 66 | 296 | 1.24e-153 | 447 |
| MS.gene92127.t1 | MTR_6g090505 | 83.544 | 237 | 39 | 0 | 1 | 237 | 1 | 237 | 3.44e-143 | 423 |
| MS.gene92127.t1 | MTR_6g090505 | 66.667 | 102 | 7 | 2 | 332 | 431 | 230 | 306 | 3.00e-33 | 132 |
| MS.gene92127.t1 | MTR_6g090505 | 77.551 | 49 | 11 | 0 | 503 | 551 | 314 | 362 | 9.15e-12 | 67.8 |
| MS.gene92127.t1 | MTR_1g083640 | 90.196 | 204 | 20 | 0 | 1 | 204 | 81 | 284 | 1.17e-136 | 403 |
| MS.gene92127.t1 | MTR_8g446020 | 79.825 | 228 | 46 | 0 | 4 | 231 | 29 | 256 | 2.07e-131 | 389 |
| MS.gene92127.t1 | MTR_0337s0060 | 59.177 | 316 | 29 | 4 | 383 | 695 | 21 | 239 | 1.37e-109 | 332 |
| MS.gene92127.t1 | MTR_2g014100 | 86.628 | 172 | 23 | 0 | 1 | 172 | 74 | 245 | 5.13e-106 | 323 |
| MS.gene92127.t1 | MTR_0337s0040 | 78.125 | 192 | 42 | 0 | 4 | 195 | 30 | 221 | 8.64e-106 | 322 |
| MS.gene92127.t1 | MTR_1g055240 | 88.028 | 142 | 17 | 0 | 27 | 168 | 3 | 144 | 2.50e-87 | 271 |
| MS.gene92127.t1 | MTR_0019s0290 | 82.237 | 152 | 27 | 0 | 18 | 169 | 9 | 160 | 1.37e-86 | 269 |
| MS.gene92127.t1 | MTR_3g028680 | 81.457 | 151 | 25 | 1 | 554 | 701 | 1 | 151 | 5.35e-81 | 256 |
| MS.gene92127.t1 | MTR_3g008240 | 86.232 | 138 | 19 | 0 | 1 | 138 | 66 | 203 | 5.47e-81 | 256 |
| MS.gene92127.t1 | MTR_4g040430 | 85.507 | 138 | 16 | 1 | 1 | 138 | 65 | 198 | 3.32e-79 | 251 |
| MS.gene92127.t1 | MTR_2g067090 | 78.378 | 148 | 29 | 1 | 557 | 701 | 99 | 246 | 7.17e-72 | 235 |
| MS.gene92127.t1 | MTR_4g133495 | 63.536 | 181 | 40 | 2 | 512 | 689 | 88 | 245 | 3.78e-68 | 225 |
| MS.gene92127.t1 | MTR_4g133340 | 63.536 | 181 | 40 | 2 | 512 | 689 | 88 | 245 | 3.78e-68 | 225 |
| MS.gene92127.t1 | MTR_5g071590 | 80.583 | 103 | 20 | 0 | 1 | 103 | 78 | 180 | 8.22e-57 | 191 |
| MS.gene92127.t1 | MTR_6g051425 | 33.333 | 273 | 154 | 5 | 21 | 277 | 64 | 324 | 2.89e-36 | 140 |
| MS.gene92127.t1 | MTR_1281s0010 | 80.952 | 63 | 12 | 0 | 1 | 63 | 47 | 109 | 3.37e-29 | 112 |
| MS.gene92127.t1 | MTR_2g067130 | 62.162 | 74 | 22 | 2 | 631 | 701 | 46 | 116 | 2.11e-18 | 83.2 |
| MS.gene92127.t1 | MTR_1g070355 | 25.357 | 280 | 193 | 4 | 21 | 298 | 119 | 384 | 5.16e-16 | 82.0 |
| MS.gene92127.t1 | MTR_0337s0050 | 75.000 | 36 | 9 | 0 | 195 | 230 | 14 | 49 | 1.16e-13 | 67.0 |
| MS.gene92127.t1 | MTR_0402s0040 | 26.000 | 150 | 96 | 3 | 20 | 169 | 71 | 205 | 1.62e-12 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92127.t1 | AT4G38180 | 27.844 | 589 | 349 | 12 | 20 | 601 | 118 | 637 | 2.05e-68 | 239 |
| MS.gene92127.t1 | AT4G15090 | 25.000 | 648 | 410 | 13 | 59 | 689 | 121 | 709 | 5.03e-59 | 214 |
| MS.gene92127.t1 | AT4G15090 | 25.000 | 648 | 410 | 13 | 59 | 689 | 121 | 709 | 5.03e-59 | 214 |
| MS.gene92127.t1 | AT4G15090 | 25.000 | 648 | 410 | 13 | 59 | 689 | 121 | 709 | 5.03e-59 | 214 |
| MS.gene92127.t1 | AT4G15090 | 25.000 | 648 | 410 | 13 | 59 | 689 | 121 | 709 | 5.03e-59 | 214 |
| MS.gene92127.t1 | AT4G15090 | 25.000 | 648 | 410 | 13 | 59 | 689 | 121 | 709 | 5.03e-59 | 214 |
| MS.gene92127.t1 | AT2G27110 | 25.963 | 597 | 368 | 15 | 63 | 655 | 108 | 634 | 5.43e-53 | 197 |
| MS.gene92127.t1 | AT2G27110 | 25.963 | 597 | 368 | 15 | 63 | 655 | 108 | 634 | 5.43e-53 | 197 |
| MS.gene92127.t1 | AT2G27110 | 26.916 | 509 | 315 | 11 | 149 | 655 | 36 | 489 | 1.15e-52 | 194 |
| MS.gene92127.t1 | AT3G06250 | 26.180 | 466 | 284 | 10 | 135 | 597 | 295 | 703 | 2.70e-48 | 182 |
| MS.gene92127.t1 | AT3G06250 | 26.180 | 466 | 284 | 10 | 135 | 597 | 295 | 703 | 2.70e-48 | 182 |
| MS.gene92127.t1 | AT3G06250 | 26.180 | 466 | 284 | 10 | 135 | 597 | 295 | 703 | 2.70e-48 | 182 |
| MS.gene92127.t1 | AT1G76320 | 24.534 | 644 | 394 | 17 | 19 | 656 | 41 | 598 | 6.08e-48 | 180 |
| MS.gene92127.t1 | AT1G76320 | 24.534 | 644 | 394 | 17 | 19 | 656 | 41 | 598 | 1.20e-47 | 180 |
| MS.gene92127.t1 | AT1G76320 | 24.572 | 643 | 393 | 17 | 19 | 655 | 41 | 597 | 1.49e-47 | 180 |
| MS.gene92127.t1 | AT1G76320 | 24.572 | 643 | 393 | 17 | 19 | 655 | 41 | 597 | 1.49e-47 | 180 |
| MS.gene92127.t1 | AT3G22170 | 22.411 | 647 | 408 | 14 | 5 | 644 | 100 | 659 | 8.09e-46 | 176 |
| MS.gene92127.t1 | AT3G22170 | 22.411 | 647 | 408 | 14 | 5 | 644 | 100 | 659 | 8.09e-46 | 176 |
| MS.gene92127.t1 | AT4G38170 | 25.290 | 431 | 264 | 11 | 171 | 598 | 24 | 399 | 1.18e-43 | 166 |
| MS.gene92127.t1 | AT5G18960 | 26.115 | 471 | 282 | 12 | 134 | 597 | 316 | 727 | 4.59e-43 | 167 |
| MS.gene92127.t1 | AT5G18960 | 26.115 | 471 | 282 | 12 | 134 | 597 | 316 | 727 | 4.59e-43 | 167 |
| MS.gene92127.t1 | AT1G10240 | 24.515 | 567 | 350 | 14 | 43 | 595 | 102 | 604 | 4.36e-40 | 157 |
| MS.gene92127.t1 | AT1G10240 | 24.515 | 567 | 350 | 14 | 43 | 595 | 102 | 604 | 4.36e-40 | 157 |
| MS.gene92127.t1 | AT2G32250 | 23.859 | 679 | 389 | 17 | 5 | 679 | 68 | 622 | 2.66e-38 | 152 |
| MS.gene92127.t1 | AT2G32250 | 23.859 | 679 | 389 | 17 | 5 | 679 | 27 | 581 | 3.37e-38 | 152 |
| MS.gene92127.t1 | AT2G32250 | 23.859 | 679 | 389 | 17 | 5 | 679 | 27 | 581 | 3.43e-38 | 152 |
| MS.gene92127.t1 | AT5G28530 | 23.934 | 610 | 372 | 16 | 5 | 596 | 84 | 619 | 4.28e-38 | 151 |
| MS.gene92127.t1 | AT2G32250 | 23.859 | 679 | 389 | 17 | 5 | 679 | 68 | 622 | 4.34e-38 | 152 |
| MS.gene92127.t1 | AT2G32250 | 23.859 | 679 | 389 | 17 | 5 | 679 | 68 | 622 | 4.34e-38 | 152 |
| MS.gene92127.t1 | AT2G32250 | 23.859 | 679 | 389 | 17 | 5 | 679 | 68 | 622 | 6.06e-38 | 151 |
| MS.gene92127.t1 | AT2G32250 | 23.859 | 679 | 389 | 17 | 5 | 679 | 68 | 622 | 6.06e-38 | 151 |
| MS.gene92127.t1 | AT2G32250 | 23.859 | 679 | 389 | 17 | 5 | 679 | 68 | 622 | 6.06e-38 | 151 |
| MS.gene92127.t1 | AT5G28530 | 23.770 | 610 | 369 | 17 | 5 | 596 | 84 | 615 | 3.35e-37 | 148 |
| MS.gene92127.t1 | AT5G28530 | 23.770 | 610 | 369 | 17 | 5 | 596 | 84 | 615 | 3.35e-37 | 148 |
| MS.gene92127.t1 | AT1G80010 | 25.109 | 458 | 289 | 12 | 146 | 598 | 253 | 661 | 2.87e-35 | 143 |
| MS.gene92127.t1 | AT1G52520 | 21.739 | 598 | 396 | 14 | 2 | 598 | 112 | 638 | 3.65e-31 | 130 |
| MS.gene92127.t1 | AT4G19990 | 27.612 | 268 | 187 | 3 | 155 | 419 | 106 | 369 | 9.42e-27 | 116 |
| MS.gene92127.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 527 | 657 | 438 | 558 | 1.08e-12 | 72.0 |
| MS.gene92127.t1 | AT4G19990 | 27.612 | 268 | 187 | 3 | 155 | 419 | 177 | 440 | 9.91e-27 | 116 |
| MS.gene92127.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 527 | 657 | 509 | 629 | 1.21e-12 | 72.0 |
| MS.gene92127.t1 | AT4G19990 | 27.612 | 268 | 187 | 3 | 155 | 419 | 163 | 426 | 1.01e-26 | 116 |
| MS.gene92127.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 527 | 657 | 495 | 615 | 1.12e-12 | 72.0 |
| MS.gene92127.t1 | AT4G19990 | 27.612 | 268 | 187 | 3 | 155 | 419 | 163 | 426 | 1.01e-26 | 116 |
| MS.gene92127.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 527 | 657 | 495 | 615 | 1.12e-12 | 72.0 |
| MS.gene92127.t1 | AT4G19990 | 27.612 | 268 | 187 | 3 | 155 | 419 | 163 | 426 | 1.14e-26 | 116 |
| MS.gene92127.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 527 | 657 | 495 | 615 | 1.14e-12 | 72.0 |
| MS.gene92127.t1 | AT4G19990 | 27.612 | 268 | 187 | 3 | 155 | 419 | 163 | 426 | 1.14e-26 | 116 |
| MS.gene92127.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 527 | 657 | 495 | 615 | 1.14e-12 | 72.0 |
| MS.gene92127.t1 | AT4G19990 | 27.612 | 268 | 187 | 3 | 155 | 419 | 163 | 426 | 1.16e-26 | 116 |
| MS.gene92127.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 527 | 657 | 495 | 615 | 1.28e-12 | 71.6 |
| MS.gene92127.t1 | AT5G28530 | 21.500 | 600 | 336 | 19 | 5 | 596 | 84 | 556 | 7.82e-19 | 91.3 |
| MS.gene92127.t1 | AT5G28530 | 21.333 | 600 | 333 | 20 | 5 | 596 | 84 | 552 | 3.60e-18 | 89.4 |
Find 109 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGCTGAGTTGGACTTTA+AGG | 0.133287 | 8.3:-65315197 | MS.gene92127:CDS |
| TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 8.3:-65315506 | MS.gene92127:CDS |
| AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 8.3:+65314371 | None:intergenic |
| CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 8.3:-65315239 | MS.gene92127:CDS |
| CAACAAGATTATGCTCTATT+TGG | 0.198611 | 8.3:-65316290 | MS.gene92127:CDS |
| TTCATTTCAGCTGCCTTTCT+TGG | 0.201003 | 8.3:-65315787 | MS.gene92127:intron |
| CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 8.3:-65315754 | MS.gene92127:CDS |
| TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 8.3:+65315660 | None:intergenic |
| TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 8.3:+65314377 | None:intergenic |
| AATCAGATTTCGACTACAAT+TGG | 0.318540 | 8.3:-65315465 | MS.gene92127:CDS |
| TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 8.3:-65314525 | MS.gene92127:CDS |
| GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 8.3:+65316240 | None:intergenic |
| GGTTTCGAATGTTGATGTTT+TGG | 0.354913 | 8.3:-65314942 | MS.gene92127:CDS |
| ACTAGCCTGGTCTGTGTATA+TGG | 0.360230 | 8.3:+65315642 | None:intergenic |
| TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 8.3:-65315365 | MS.gene92127:CDS |
| CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 8.3:-65314533 | MS.gene92127:CDS |
| AACAATAAATATCGGCCATT+AGG | 0.388497 | 8.3:-65316233 | MS.gene92127:intron |
| ACCGAACAAACAATAAATAT+CGG | 0.389395 | 8.3:-65316241 | MS.gene92127:CDS |
| GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 8.3:-65315366 | MS.gene92127:CDS |
| GTCTTTAGTGCCAACATTCA+TGG | 0.395146 | 8.3:+65314649 | None:intergenic |
| TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 8.3:+65316770 | None:intergenic |
| AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 8.3:-65314385 | MS.gene92127:intron |
| TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 8.3:+65314395 | None:intergenic |
| TTCCTTCAAATACTATTATG+AGG | 0.399583 | 8.3:-65315065 | MS.gene92127:CDS |
| GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 8.3:-65314500 | MS.gene92127:CDS |
| CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 8.3:-65314817 | MS.gene92127:CDS |
| GATTATGATCTTCAAACCTT+GGG | 0.413114 | 8.3:+65314894 | None:intergenic |
| GGGTTGTCACAGTCGACATT+AGG | 0.419786 | 8.3:-65314859 | MS.gene92127:CDS |
| CGATTATGATCTTCAAACCT+TGG | 0.425681 | 8.3:+65314893 | None:intergenic |
| CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 8.3:-65316593 | MS.gene92127:CDS |
| AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 8.3:-65316711 | MS.gene92127:CDS |
| TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 8.3:+65315649 | None:intergenic |
| GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 8.3:-65316728 | MS.gene92127:CDS |
| CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 8.3:+65314716 | None:intergenic |
| CGTTATGCTTGTAACAAAGA+AGG | 0.449439 | 8.3:-65316845 | MS.gene92127:CDS |
| GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 8.3:-65316563 | MS.gene92127:CDS |
| TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 8.3:-65315575 | MS.gene92127:CDS |
| GGCCTACTTCGGACTTTAAG+TGG | 0.455765 | 8.3:-65315411 | MS.gene92127:CDS |
| ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 8.3:-65314816 | MS.gene92127:CDS |
| GCATTGAAAGACTCACTTAA+CGG | 0.462897 | 8.3:+65315307 | None:intergenic |
| ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 8.3:-65316879 | MS.gene92127:CDS |
| GAAGTGATGGGTCAAGGAGT+TGG | 0.484292 | 8.3:-65316518 | MS.gene92127:CDS |
| CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 8.3:+65315063 | None:intergenic |
| TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 8.3:+65316734 | None:intergenic |
| TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 8.3:-65316450 | MS.gene92127:CDS |
| CTCAAGTAGCACAAATGCTC+TGG | 0.489977 | 8.3:+65316623 | None:intergenic |
| CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 8.3:-65316885 | MS.gene92127:CDS |
| TATGAGGAGGACACAACAAA+AGG | 0.490908 | 8.3:-65315049 | MS.gene92127:CDS |
| ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 8.3:+65315774 | None:intergenic |
| CTGTCTATGAACCATCTGTT+GGG | 0.491412 | 8.3:-65314424 | MS.gene92127:CDS |
| ATCAGATTTCGACTACAATT+GGG | 0.491708 | 8.3:-65315464 | MS.gene92127:CDS |
| CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 8.3:-65316437 | MS.gene92127:CDS |
| ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 8.3:-65315225 | MS.gene92127:CDS |
| GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 8.3:+65315145 | None:intergenic |
| GAGAACATCTTATGAAGTGA+TGG | 0.499875 | 8.3:-65316531 | MS.gene92127:CDS |
| TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 8.3:+65316345 | None:intergenic |
| AAATGCTCTGGTTTATGTAA+TGG | 0.504865 | 8.3:+65316635 | None:intergenic |
| CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 8.3:-65315378 | MS.gene92127:CDS |
| ATCATAATCGACTTGATGAA+AGG | 0.507955 | 8.3:-65314880 | MS.gene92127:CDS |
| TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 8.3:+65316479 | None:intergenic |
| GAGGGATAATCATGCTGAGT+TGG | 0.508852 | 8.3:-65315206 | MS.gene92127:CDS |
| ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 8.3:-65315360 | MS.gene92127:CDS |
| TGTCTATAAGATATATAAGT+GGG | 0.514682 | 8.3:-65316675 | MS.gene92127:CDS |
| GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 8.3:+65314900 | None:intergenic |
| TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 8.3:+65315257 | None:intergenic |
| TCATAATCGACTTGATGAAA+GGG | 0.526860 | 8.3:-65314879 | MS.gene92127:CDS |
| CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 8.3:+65315068 | None:intergenic |
| ACTTCAACAACGCACTAGCC+TGG | 0.534735 | 8.3:+65315629 | None:intergenic |
| TAACAAAGAAGGTTTCAAGA+AGG | 0.538422 | 8.3:-65316834 | MS.gene92127:CDS |
| AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 8.3:+65315262 | None:intergenic |
| ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 8.3:-65315048 | MS.gene92127:CDS |
| AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 8.3:-65316833 | MS.gene92127:CDS |
| CTGAAATCCACCATGAATGT+TGG | 0.557140 | 8.3:-65314659 | MS.gene92127:CDS |
| AATGAAGCTCTCTCGAAACC+AGG | 0.565261 | 8.3:-65316383 | MS.gene92127:CDS |
| GCTGTCTATGAACCATCTGT+TGG | 0.568181 | 8.3:-65314425 | MS.gene92127:CDS |
| GTGATGGGTCAAGGAGTTGG+AGG | 0.568802 | 8.3:-65316515 | MS.gene92127:CDS |
| TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 8.3:-65314573 | MS.gene92127:CDS |
| ATGTCTATAAGATATATAAG+TGG | 0.572287 | 8.3:-65316676 | MS.gene92127:CDS |
| GAGAATGCAAAGAAAAGTCT+CGG | 0.575360 | 8.3:-65315550 | MS.gene92127:CDS |
| GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 8.3:+65315144 | None:intergenic |
| TTTGGTGCAGTCCCAACAGA+TGG | 0.581566 | 8.3:+65314413 | None:intergenic |
| TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 8.3:+65315123 | None:intergenic |
| TCTTATGAAGTGATGGGTCA+AGG | 0.589029 | 8.3:-65316524 | MS.gene92127:CDS |
| TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 8.3:-65314532 | MS.gene92127:CDS |
| ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 8.3:-65314537 | MS.gene92127:CDS |
| TTGAAGAAAACCTTTCCCCA+AGG | 0.594796 | 8.3:-65314910 | MS.gene92127:CDS |
| TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 8.3:+65314457 | None:intergenic |
| GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 8.3:-65316444 | MS.gene92127:CDS |
| TTGATATCGTTGTGCTTGAG+TGG | 0.601464 | 8.3:+65314625 | None:intergenic |
| AGAACATCTTATGAAGTGAT+GGG | 0.601988 | 8.3:-65316530 | MS.gene92127:CDS |
| AACTCGTCAAAAGGAGATGG+TGG | 0.603142 | 8.3:-65316441 | MS.gene92127:CDS |
| ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 8.3:-65314570 | MS.gene92127:CDS |
| ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 8.3:-65315147 | MS.gene92127:CDS |
| CTTCAAATACTATTATGAGG+AGG | 0.607664 | 8.3:-65315062 | MS.gene92127:CDS |
| AGCCACTTAAAGTCCGAAGT+AGG | 0.620546 | 8.3:+65315409 | None:intergenic |
| AGAACTGGACTGTCACATGT+TGG | 0.620791 | 8.3:+65316785 | None:intergenic |
| GGGTCAAGGAGTTGGAGGCA+CGG | 0.621882 | 8.3:-65316510 | MS.gene92127:CDS |
| ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 8.3:+65314895 | None:intergenic |
| GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 8.3:-65315574 | MS.gene92127:CDS |
| TTTAGTGCCAACATTCATGG+TGG | 0.641441 | 8.3:+65314652 | None:intergenic |
| CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 8.3:-65315224 | MS.gene92127:CDS |
| GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 8.3:+65314674 | None:intergenic |
| TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 8.3:+65315103 | None:intergenic |
| GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 8.3:-65314548 | MS.gene92127:CDS |
| CATGTCGACATAAGAAACCC+CGG | 0.663279 | 8.3:+65314798 | None:intergenic |
| TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 8.3:-65314815 | MS.gene92127:CDS |
| ATGTTGATAATGATAATGAG+AGG | 0.683310 | 8.3:-65314964 | MS.gene92127:CDS |
| TCAAACCATATACACAGACC+AGG | 0.683597 | 8.3:-65315647 | MS.gene92127:CDS |
| TGTTGATAATGATAATGAGA+GGG | 0.689129 | 8.3:-65314963 | MS.gene92127:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTCTATAAGATATATAAG+TGG | - | chr8.3:65314495-65314514 | MS.gene92127:CDS | 20.0% |
| !! | CAATTCACAAAATAAGAAAT+CGG | - | chr8.3:65314286-65314305 | MS.gene92127:intron | 20.0% |
| !! | TGTCTATAAGATATATAAGT+GGG | - | chr8.3:65314496-65314515 | MS.gene92127:CDS | 20.0% |
| !!! | AATTTAATGTTCTGGTTTAT+GGG | - | chr8.3:65315113-65315132 | MS.gene92127:CDS | 20.0% |
| !!! | ATGATGAAAAACTGTTTTAA+TGG | - | chr8.3:65315735-65315754 | MS.gene92127:CDS | 20.0% |
| !!! | TGAATGTTTATATTGATTGA+AGG | - | chr8.3:65315085-65315104 | MS.gene92127:CDS | 20.0% |
| ! | AAAACACCTTGAAAAACATT+CGG | + | chr8.3:65315573-65315592 | None:intergenic | 25.0% |
| ! | ACAAAATAAGAAATCGGATA+AGG | - | chr8.3:65314292-65314311 | MS.gene92127:intron | 25.0% |
| ! | ACCGAACAAACAATAAATAT+CGG | - | chr8.3:65314930-65314949 | MS.gene92127:CDS | 25.0% |
| ! | AGTACAAAATACTAACCTAA+TGG | + | chr8.3:65314956-65314975 | None:intergenic | 25.0% |
| ! | CATAATAGTATTTGAAGGAA+AGG | + | chr8.3:65316106-65316125 | None:intergenic | 25.0% |
| ! | CTTTAGTCATTTCAACATTA+TGG | - | chr8.3:65315932-65315951 | MS.gene92127:intron | 25.0% |
| ! | TGAAATTTGAATGAATGTTC+TGG | - | chr8.3:65315003-65315022 | MS.gene92127:CDS | 25.0% |
| ! | TGAATAAATGAAAAGCAAGA+TGG | + | chr8.3:65316071-65316090 | None:intergenic | 25.0% |
| ! | TTCCTTCAAATACTATTATG+AGG | - | chr8.3:65316106-65316125 | MS.gene92127:intron | 25.0% |
| ! | TTTCGATGAGTTAACTAATT+TGG | - | chr8.3:65315665-65315684 | MS.gene92127:CDS | 25.0% |
| !! | AGGTTTAGAATTTAATGTTC+TGG | - | chr8.3:65315105-65315124 | MS.gene92127:CDS | 25.0% |
| !! | TGTTGTATTTTGTTCTGATT+TGG | - | chr8.3:65315361-65315380 | MS.gene92127:CDS | 25.0% |
| !!! | ATGTTGATAATGATAATGAG+AGG | - | chr8.3:65316207-65316226 | MS.gene92127:intron | 25.0% |
| !!! | CTTATTTTGTGAATTGTTCT+TGG | + | chr8.3:65314282-65314301 | None:intergenic | 25.0% |
| !!! | GAATTTAATGTTCTGGTTTA+TGG | - | chr8.3:65315112-65315131 | MS.gene92127:CDS | 25.0% |
| !!! | GCTTTAATAAATTCTAAAGC+TGG | - | chr8.3:65314608-65314627 | MS.gene92127:CDS | 25.0% |
| !!! | TGAAAAACTGTTTTAATGGA+TGG | - | chr8.3:65315739-65315758 | MS.gene92127:CDS | 25.0% |
| !!! | TGTTGATAATGATAATGAGA+GGG | - | chr8.3:65316208-65316227 | MS.gene92127:intron | 25.0% |
| AAACACATATGATCTTTCCA+TGG | + | chr8.3:65315176-65315195 | None:intergenic | 30.0% | |
| AACAAAGAAGGTTTCAAGAA+GGG | - | chr8.3:65314338-65314357 | MS.gene92127:intron | 30.0% | |
| AACAATAAATATCGGCCATT+AGG | - | chr8.3:65314938-65314957 | MS.gene92127:CDS | 30.0% | |
| AAGAAAGACCAAATCCAATT+AGG | - | chr8.3:65316786-65316805 | MS.gene92127:CDS | 30.0% | |
| AATCAGATTTCGACTACAAT+TGG | - | chr8.3:65315706-65315725 | MS.gene92127:CDS | 30.0% | |
| AGAACATCTTATGAAGTGAT+GGG | - | chr8.3:65314641-65314660 | MS.gene92127:CDS | 30.0% | |
| ATCAGATTTCGACTACAATT+GGG | - | chr8.3:65315707-65315726 | MS.gene92127:CDS | 30.0% | |
| ATGATTGTCAAAACCAAGAA+AGG | + | chr8.3:65315400-65315419 | None:intergenic | 30.0% | |
| ATTATGATCTTCAAACCTTG+GGG | + | chr8.3:65316279-65316298 | None:intergenic | 30.0% | |
| CAACAAGATTATGCTCTATT+TGG | - | chr8.3:65314881-65314900 | MS.gene92127:CDS | 30.0% | |
| CTCCTCATAATAGTATTTGA+AGG | + | chr8.3:65316111-65316130 | None:intergenic | 30.0% | |
| CTGGTATATGTGTGTTAATT+TGG | - | chr8.3:65315042-65315061 | MS.gene92127:CDS | 30.0% | |
| CTTCAAATACTATTATGAGG+AGG | - | chr8.3:65316109-65316128 | MS.gene92127:intron | 30.0% | |
| GATTATGATCTTCAAACCTT+GGG | + | chr8.3:65316280-65316299 | None:intergenic | 30.0% | |
| GCCGATATTTATTGTTTGTT+CGG | + | chr8.3:65314934-65314953 | None:intergenic | 30.0% | |
| TAAAGAAAAACCAGAGGAAA+GGG | - | chr8.3:65314427-65314446 | MS.gene92127:CDS | 30.0% | |
| TAAAGAATCGAACAAGTGAA+TGG | + | chr8.3:65315917-65315936 | None:intergenic | 30.0% | |
| TAACAAAGAAGGTTTCAAGA+AGG | - | chr8.3:65314337-65314356 | MS.gene92127:intron | 30.0% | |
| TGGATATCATAGTAAAAACC+TGG | + | chr8.3:65314809-65314828 | None:intergenic | 30.0% | |
| TGGTGTATACTTGTTTACTA+CGG | + | chr8.3:65316051-65316070 | None:intergenic | 30.0% | |
| TTCTTTGACCTAATTGGATT+TGG | + | chr8.3:65316797-65316816 | None:intergenic | 30.0% | |
| TTTAAGTCCGAAAATCGAAA+AGG | + | chr8.3:65314695-65314714 | None:intergenic | 30.0% | |
| TTTCTATTTACACAGCACAA+TGG | - | chr8.3:65315320-65315339 | MS.gene92127:CDS | 30.0% | |
| ! | AAATGCTCTGGTTTATGTAA+TGG | + | chr8.3:65314539-65314558 | None:intergenic | 30.0% |
| ! | AGCTGGAATATATTTGAAGT+TGG | - | chr8.3:65314460-65314479 | MS.gene92127:CDS | 30.0% |
| ! | CAAAGTTTTCACAATTGAGA+AGG | - | chr8.3:65316166-65316185 | MS.gene92127:intron | 30.0% |
| ! | GAATCTTCCTTTTCGATTTT+CGG | - | chr8.3:65314685-65314704 | MS.gene92127:CDS | 30.0% |
| ! | GCATCTGAAATATTTCTCAA+CGG | - | chr8.3:65316623-65316642 | MS.gene92127:CDS | 30.0% |
| ! | TATGGTTTGAGGTTTCTTAT+TGG | + | chr8.3:65315514-65315533 | None:intergenic | 30.0% |
| ! | TCAATTCCGAATGTTTTTCA+AGG | - | chr8.3:65315564-65315583 | MS.gene92127:CDS | 30.0% |
| ! | TGAGGCTTTAACAATTTAAG+CGG | - | chr8.3:65316895-65316914 | MS.gene92127:CDS | 30.0% |
| ! | TTTGGTCTTTCTTTGAACTT+TGG | + | chr8.3:65316779-65316798 | None:intergenic | 30.0% |
| !! | ACATGTTTTCAAGATTTTGG+AGG | - | chr8.3:65316391-65316410 | MS.gene92127:CDS | 30.0% |
| !! | ATCATAATCGACTTGATGAA+AGG | - | chr8.3:65316291-65316310 | MS.gene92127:CDS | 30.0% |
| !! | ATGTTCTGGTTTAGAATTGA+AGG | - | chr8.3:65315017-65315036 | MS.gene92127:CDS | 30.0% |
| !! | GAGGAGTTTCTTATTTCTAA+AGG | - | chr8.3:65316671-65316690 | MS.gene92127:CDS | 30.0% |
| !! | TCATAATCGACTTGATGAAA+GGG | - | chr8.3:65316292-65316311 | MS.gene92127:CDS | 30.0% |
| !! | TCGACATGTTTTCAAGATTT+TGG | - | chr8.3:65316388-65316407 | MS.gene92127:CDS | 30.0% |
| !!! | AAGACATAGCCAGTATTTTT+TGG | - | chr8.3:65314843-65314862 | MS.gene92127:CDS | 30.0% |
| !!! | AGACATAGCCAGTATTTTTT+GGG | - | chr8.3:65314844-65314863 | MS.gene92127:CDS | 30.0% |
| !!! | CTGCACAATATGTTTTAAAG+CGG | - | chr8.3:65316456-65316475 | MS.gene92127:CDS | 30.0% |
| !!! | GTTTTTCAAGGTGTTTTTCA+TGG | - | chr8.3:65315576-65315595 | MS.gene92127:CDS | 30.0% |
| ACATTATGGTTCAGAGAATG+AGG | - | chr8.3:65315946-65315965 | MS.gene92127:intron | 35.0% | |
| CATAAATTCCAAGGCAAGAT+AGG | + | chr8.3:65315143-65315162 | None:intergenic | 35.0% | |
| CATTATGGTTCAGAGAATGA+GGG | - | chr8.3:65315947-65315966 | MS.gene92127:intron | 35.0% | |
| CGAGAAGTAAATGAAGTTCA+AGG | - | chr8.3:65314578-65314597 | MS.gene92127:CDS | 35.0% | |
| CGATTATGATCTTCAAACCT+TGG | + | chr8.3:65316281-65316300 | None:intergenic | 35.0% | |
| CGTTATGCTTGTAACAAAGA+AGG | - | chr8.3:65314326-65314345 | MS.gene92127:intron | 35.0% | |
| CTAAAGAAAAACCAGAGGAA+AGG | - | chr8.3:65314426-65314445 | MS.gene92127:CDS | 35.0% | |
| CTCATTCAAATCGTATGCAT+TGG | - | chr8.3:65315793-65315812 | MS.gene92127:intron | 35.0% | |
| GAAAGCTAAAGAAAAACCAG+AGG | - | chr8.3:65314421-65314440 | MS.gene92127:CDS | 35.0% | |
| GAAGCAAAAGAAAGATGATG+AGG | - | chr8.3:65316877-65316896 | MS.gene92127:CDS | 35.0% | |
| GACAGAAATTCCTTATAGCT+CGG | - | chr8.3:65316852-65316871 | MS.gene92127:CDS | 35.0% | |
| GAGAACATCTTATGAAGTGA+TGG | - | chr8.3:65314640-65314659 | MS.gene92127:CDS | 35.0% | |
| GAGAATGCAAAGAAAAGTCT+CGG | - | chr8.3:65315621-65315640 | MS.gene92127:CDS | 35.0% | |
| GCATTGAAAGACTCACTTAA+CGG | + | chr8.3:65315867-65315886 | None:intergenic | 35.0% | |
| GTCTGCTTAATCCTAAAAAC+AGG | - | chr8.3:65314363-65314382 | MS.gene92127:intron | 35.0% | |
| TCTAATGACAACTCGTCAAA+AGG | - | chr8.3:65314721-65314740 | MS.gene92127:CDS | 35.0% | |
| TGTACAGAGCATAAATTCCA+AGG | + | chr8.3:65315152-65315171 | None:intergenic | 35.0% | |
| TTCTCATACTCAACAAGAAC+TGG | + | chr8.3:65314404-65314423 | None:intergenic | 35.0% | |
| ! | CATCGTAAGAGTGTGTTATT+TGG | - | chr8.3:65315417-65315436 | MS.gene92127:CDS | 35.0% |
| ! | GAGGCTTTAACAATTTAAGC+GGG | - | chr8.3:65316896-65316915 | MS.gene92127:CDS | 35.0% |
| ! | GGTTTCGAATGTTGATGTTT+TGG | - | chr8.3:65316229-65316248 | MS.gene92127:intron | 35.0% |
| ! | TCTTTCAATGCTTTTCTTCG+TGG | - | chr8.3:65315876-65315895 | MS.gene92127:intron | 35.0% |
| ! | TGGTTTAGAATTGAAGGTTC+TGG | - | chr8.3:65315023-65315042 | MS.gene92127:CDS | 35.0% |
| ! | TTTTTCATGGTCTTTGCTCA+TGG | - | chr8.3:65315589-65315608 | MS.gene92127:CDS | 35.0% |
| !! | ACTGCTTTTGAAGACTTAGA+AGG | + | chr8.3:65316725-65316744 | None:intergenic | 35.0% |
| !! | CGCTTTAAAACATATTGTGC+AGG | + | chr8.3:65316458-65316477 | None:intergenic | 35.0% |
| !! | TATGCATTGGTCTTCAGTTT+GGG | - | chr8.3:65315806-65315825 | MS.gene92127:intron | 35.0% |
| !! | TTCAAGATTTTGGAGGTCTT+AGG | - | chr8.3:65316398-65316417 | MS.gene92127:CDS | 35.0% |
| !! | TTTTAATGGATGGCCTACTT+CGG | - | chr8.3:65315749-65315768 | MS.gene92127:CDS | 35.0% |
| !!! | AGACATCAGCTACTTTTGAT+TGG | - | chr8.3:65315460-65315479 | MS.gene92127:CDS | 35.0% |
| !!! | CACAATATGTTTTAAAGCGG+TGG | - | chr8.3:65316459-65316478 | MS.gene92127:CDS | 35.0% |
| AATCGAACAAGTGAATGGTC+TGG | + | chr8.3:65315912-65315931 | None:intergenic | 40.0% | |
| ACCTATGATCTTTGCATAGC+TGG | + | chr8.3:65315270-65315289 | None:intergenic | 40.0% | |
| AGTCGCTTCTTTGACCTAAT+TGG | + | chr8.3:65316803-65316822 | None:intergenic | 40.0% | |
| ATGAGGAGGACACAACAAAA+GGG | - | chr8.3:65316123-65316142 | MS.gene92127:intron | 40.0% | |
| ATGTCGTATGTTTGAGAACC+GGG | - | chr8.3:65316355-65316374 | MS.gene92127:CDS | 40.0% | |
| ATTTATGCTCTGTACAGCCA+TGG | - | chr8.3:65315156-65315175 | MS.gene92127:CDS | 40.0% | |
| ATTTCTCAACGGTGTTCTTG+AGG | - | chr8.3:65316634-65316653 | MS.gene92127:CDS | 40.0% | |
| CATGTCGTATGTTTGAGAAC+CGG | - | chr8.3:65316354-65316373 | MS.gene92127:CDS | 40.0% | |
| CTGAAATCCACCATGAATGT+TGG | - | chr8.3:65316512-65316531 | MS.gene92127:CDS | 40.0% | |
| CTGTCTATGAACCATCTGTT+GGG | - | chr8.3:65316747-65316766 | MS.gene92127:CDS | 40.0% | |
| GATTTCAGCTTATCGACAGA+CGG | + | chr8.3:65316500-65316519 | None:intergenic | 40.0% | |
| GTCTTTAGTGCCAACATTCA+TGG | + | chr8.3:65316525-65316544 | None:intergenic | 40.0% | |
| TATGAGGAGGACACAACAAA+AGG | - | chr8.3:65316122-65316141 | MS.gene92127:intron | 40.0% | |
| TCAAACCATATACACAGACC+AGG | - | chr8.3:65315524-65315543 | MS.gene92127:CDS | 40.0% | |
| TCCAGCTATGCAAAGATCAT+AGG | - | chr8.3:65315266-65315285 | MS.gene92127:CDS | 40.0% | |
| TCCATCTGCCCAAAAAATAC+TGG | + | chr8.3:65314855-65314874 | None:intergenic | 40.0% | |
| TGGTCTGTGTATATGGTTTG+AGG | + | chr8.3:65315525-65315544 | None:intergenic | 40.0% | |
| TTCATTTCAGCTGCCTTTCT+TGG | - | chr8.3:65315384-65315403 | MS.gene92127:CDS | 40.0% | |
| TTGAAGAAAACCTTTCCCCA+AGG | - | chr8.3:65316261-65316280 | MS.gene92127:CDS | 40.0% | |
| TTGATATCGTTGTGCTTGAG+TGG | + | chr8.3:65316549-65316568 | None:intergenic | 40.0% | |
| TTTAGTGCCAACATTCATGG+TGG | + | chr8.3:65316522-65316541 | None:intergenic | 40.0% | |
| TTTGCTTCTTCCGAGCTATA+AGG | + | chr8.3:65316865-65316884 | None:intergenic | 40.0% | |
| ! | TCATGCTGAGTTGGACTTTA+AGG | - | chr8.3:65315974-65315993 | MS.gene92127:intron | 40.0% |
| ! | TGAAGACTTAGAAGGCGTAA+CGG | + | chr8.3:65316717-65316736 | None:intergenic | 40.0% |
| !! | AAGATTTTGGAGGTCTTAGG+TGG | - | chr8.3:65316401-65316420 | MS.gene92127:CDS | 40.0% |
| !! | GTATGCATTGGTCTTCAGTT+TGG | - | chr8.3:65315805-65315824 | MS.gene92127:intron | 40.0% |
| !! | TCACATGTTGGCCTGTTTTT+AGG | + | chr8.3:65314377-65314396 | None:intergenic | 40.0% |
| !! | TCTTATGAAGTGATGGGTCA+AGG | - | chr8.3:65314647-65314666 | MS.gene92127:CDS | 40.0% |
| AACTCGTCAAAAGGAGATGG+TGG | - | chr8.3:65314730-65314749 | MS.gene92127:CDS | 45.0% | |
| AATGAAGCTCTCTCGAAACC+AGG | - | chr8.3:65314788-65314807 | MS.gene92127:CDS | 45.0% | |
| AGAACTGGACTGTCACATGT+TGG | + | chr8.3:65314389-65314408 | None:intergenic | 45.0% | |
| AGCCACTTAAAGTCCGAAGT+AGG | + | chr8.3:65315765-65315784 | None:intergenic | 45.0% | |
| ATCCCAACAGTCAGCTTATG+CGG | - | chr8.3:65316024-65316043 | MS.gene92127:intron | 45.0% | |
| CATGTCGACATAAGAAACCC+CGG | + | chr8.3:65316376-65316395 | None:intergenic | 45.0% | |
| CTCAAGTAGCACAAATGCTC+TGG | + | chr8.3:65314551-65314570 | None:intergenic | 45.0% | |
| GAAAAACCAGAGGAAAGGGT+TGG | - | chr8.3:65314431-65314450 | MS.gene92127:CDS | 45.0% | |
| GACAACTCGTCAAAAGGAGA+TGG | - | chr8.3:65314727-65314746 | MS.gene92127:CDS | 45.0% | |
| GAGGGATAATCATGCTGAGT+TGG | - | chr8.3:65315965-65315984 | MS.gene92127:intron | 45.0% | |
| GATCTTCAAACCTTGGGGAA+AGG | + | chr8.3:65316274-65316293 | None:intergenic | 45.0% | |
| GCTGTCTATGAACCATCTGT+TGG | - | chr8.3:65316746-65316765 | MS.gene92127:CDS | 45.0% | |
| TGTCGTATGTTTGAGAACCG+GGG | - | chr8.3:65316356-65316375 | MS.gene92127:CDS | 45.0% | |
| TGTCTTCTGCAGCATCAACT+TGG | + | chr8.3:65314829-65314848 | None:intergenic | 45.0% | |
| TGTTCTTGAGGCAGGGAAAA+AGG | - | chr8.3:65316646-65316665 | MS.gene92127:CDS | 45.0% | |
| TTACAACCAACCCTTTCCTC+TGG | + | chr8.3:65314440-65314459 | None:intergenic | 45.0% | |
| ! | ACTAGCCTGGTCTGTGTATA+TGG | + | chr8.3:65315532-65315551 | None:intergenic | 45.0% |
| ! | GTGAGGTCACATTTTACAGC+TGG | - | chr8.3:65315828-65315847 | MS.gene92127:intron | 45.0% |
| !! | ATTGGTCTTCAGTTTGGGTG+AGG | - | chr8.3:65315811-65315830 | MS.gene92127:intron | 45.0% |
| !! | GAAAGGGTTGGTTGTAAAGC+TGG | - | chr8.3:65314443-65314462 | MS.gene92127:CDS | 45.0% |
| !!! | GCCAGTATTTTTTGGGCAGA+TGG | - | chr8.3:65314851-65314870 | MS.gene92127:CDS | 45.0% |
| ACTTCAACAACGCACTAGCC+TGG | + | chr8.3:65315545-65315564 | None:intergenic | 50.0% | |
| GACCGCATAAGCTGACTGTT+GGG | + | chr8.3:65316029-65316048 | None:intergenic | 50.0% | |
| GGCCTACTTCGGACTTTAAG+TGG | - | chr8.3:65315760-65315779 | MS.gene92127:CDS | 50.0% | |
| GGGTTGTCACAGTCGACATT+AGG | - | chr8.3:65316312-65316331 | MS.gene92127:CDS | 50.0% | |
| GGTCTTTGCTCATGGCACAT+GGG | - | chr8.3:65315597-65315616 | MS.gene92127:CDS | 50.0% | |
| TACACGTGTTTGCGCAGATG+CGG | - | chr8.3:65316598-65316617 | MS.gene92127:CDS | 50.0% | |
| TCAACGGTGTTCTTGAGGCA+GGG | - | chr8.3:65316639-65316658 | MS.gene92127:CDS | 50.0% | |
| TGGGTGATCCTATCTTGCCT+TGG | - | chr8.3:65315132-65315151 | MS.gene92127:CDS | 50.0% | |
| TGGTCTTTGCTCATGGCACA+TGG | - | chr8.3:65315596-65315615 | MS.gene92127:CDS | 50.0% | |
| ! | TTTGGTGCAGTCCCAACAGA+TGG | + | chr8.3:65316761-65316780 | None:intergenic | 50.0% |
| !! | GAAGTGATGGGTCAAGGAGT+TGG | - | chr8.3:65314653-65314672 | MS.gene92127:CDS | 50.0% |
| CTCAACGGTGTTCTTGAGGC+AGG | - | chr8.3:65316638-65316657 | MS.gene92127:CDS | 55.0% | |
| GGACCGCATAAGCTGACTGT+TGG | + | chr8.3:65316030-65316049 | None:intergenic | 55.0% | |
| TGAGGCAGGGAAAAAGGCAG+AGG | - | chr8.3:65316652-65316671 | MS.gene92127:CDS | 55.0% | |
| ! | CGTCAAAAGGAGATGGTGGC+TGG | - | chr8.3:65314734-65314753 | MS.gene92127:CDS | 55.0% |
| !! | GTGATGGGTCAAGGAGTTGG+AGG | - | chr8.3:65314656-65314675 | MS.gene92127:CDS | 55.0% |
| ACGTGTTTGCGCAGATGCGG+AGG | - | chr8.3:65316601-65316620 | MS.gene92127:CDS | 60.0% | |
| GGGTCAAGGAGTTGGAGGCA+CGG | - | chr8.3:65314661-65314680 | MS.gene92127:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 65314269 | 65316924 | 65314269 | ID=MS.gene92127 |
| chr8.3 | mRNA | 65314269 | 65316924 | 65314269 | ID=MS.gene92127.t1;Parent=MS.gene92127 |
| chr8.3 | exon | 65316234 | 65316924 | 65316234 | ID=MS.gene92127.t1.exon1;Parent=MS.gene92127.t1 |
| chr8.3 | CDS | 65316234 | 65316924 | 65316234 | ID=cds.MS.gene92127.t1;Parent=MS.gene92127.t1 |
| chr8.3 | exon | 65314386 | 65315799 | 65314386 | ID=MS.gene92127.t1.exon2;Parent=MS.gene92127.t1 |
| chr8.3 | CDS | 65314386 | 65315799 | 65314386 | ID=cds.MS.gene92127.t1;Parent=MS.gene92127.t1 |
| chr8.3 | exon | 65314269 | 65314278 | 65314269 | ID=MS.gene92127.t1.exon3;Parent=MS.gene92127.t1 |
| chr8.3 | CDS | 65314269 | 65314278 | 65314269 | ID=cds.MS.gene92127.t1;Parent=MS.gene92127.t1 |
| Gene Sequence |
| Protein sequence |
