Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92436.t1 | XP_003616150.2 | 93.4 | 488 | 32 | 0 | 1 | 488 | 1 | 488 | 7.70E-268 | 932.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92436.t1 | Q6NQJ8 | 57.0 | 491 | 198 | 6 | 1 | 487 | 1 | 482 | 8.0e-157 | 555.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92436.t1 | G7KFS1 | 93.4 | 488 | 32 | 0 | 1 | 488 | 1 | 488 | 5.5e-268 | 932.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene92436.t1 | TR | SET |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92436.t1 | MTR_5g076640 | 93.443 | 488 | 32 | 0 | 1 | 488 | 1 | 488 | 0.0 | 936 |
| MS.gene92436.t1 | MTR_1g077040 | 26.667 | 285 | 177 | 10 | 52 | 315 | 33 | 306 | 1.24e-13 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92436.t1 | AT5G17240 | 57.026 | 491 | 198 | 6 | 1 | 487 | 1 | 482 | 0.0 | 571 |
| MS.gene92436.t1 | AT5G17240 | 57.452 | 416 | 168 | 5 | 76 | 487 | 1 | 411 | 3.52e-172 | 491 |
Find 94 sgRNAs with CRISPR-Local
Find 287 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAGTCATTAAAGCAGATTT+TGG | 0.219025 | 8.4:-59812724 | None:intergenic |
| CTCTTCTCTCTCCTCTGTTC+AGG | 0.231576 | 8.4:+59812798 | MS.gene92436:CDS |
| CAACACTCTCTTTCCTCTCT+TGG | 0.235733 | 8.4:+59812435 | MS.gene92436:CDS |
| GTCGGACGTCTTGCATATTC+TGG | 0.242969 | 8.4:+59816366 | MS.gene92436:CDS |
| TTGTTAAACTTATGTCATTC+AGG | 0.257944 | 8.4:+59816544 | MS.gene92436:CDS |
| AACATTTAAGGCATGGCTTT+GGG | 0.315162 | 8.4:+59814895 | MS.gene92436:CDS |
| CTCTTATTGCAATGTAATAC+TGG | 0.321869 | 8.4:+59816722 | MS.gene92436:CDS |
| CACTTCTACTTCATGGTCTA+AGG | 0.325752 | 8.4:+59816251 | MS.gene92436:CDS |
| GGGCAACCCCTCATAATAAA+AGG | 0.358661 | 8.4:+59816337 | MS.gene92436:CDS |
| CTATGTACACTTCTACTTCA+TGG | 0.363522 | 8.4:+59816244 | MS.gene92436:CDS |
| GACTACACTCCAATGCATTC+AGG | 0.375734 | 8.4:-59816497 | None:intergenic |
| TAACATTTAAGGCATGGCTT+TGG | 0.385694 | 8.4:+59814894 | MS.gene92436:CDS |
| AATAAGAGATACAATCAATA+AGG | 0.390425 | 8.4:-59816707 | None:intergenic |
| TAATTAAACAAGTCACCAAC+AGG | 0.396024 | 8.4:-59815635 | None:intergenic |
| GAAAGAAGCTCATGCCTTGA+TGG | 0.398662 | 8.4:+59814844 | MS.gene92436:CDS |
| CGAGAAGGTCAATGGATAGA+TGG | 0.399385 | 8.4:+59816646 | MS.gene92436:CDS |
| AGTCATAACTTTGCGGCAAA+TGG | 0.404610 | 8.4:-59814596 | None:intergenic |
| GCACCTGGAGAGGACCTATC+TGG | 0.423204 | 8.4:+59815662 | MS.gene92436:CDS |
| ATGAAATCATCGTTATGAAA+TGG | 0.434118 | 8.4:+59816409 | MS.gene92436:CDS |
| AGAATGTTGCAGTAGAGGTT+TGG | 0.444175 | 8.4:+59812657 | MS.gene92436:intron |
| CAATCAAATGGAGACAAGAA+TGG | 0.446355 | 8.4:+59815707 | MS.gene92436:CDS |
| GAATGTTGCAGTAGAGGTTT+GGG | 0.448690 | 8.4:+59812658 | MS.gene92436:intron |
| CTTGTTATACGAAGTTGGTA+AGG | 0.457725 | 8.4:+59814542 | MS.gene92436:CDS |
| GTTTGCTTGTTATACGAAGT+TGG | 0.462021 | 8.4:+59814537 | MS.gene92436:CDS |
| AGGAAAGAGAGTGTTGAGAA+TGG | 0.462418 | 8.4:-59812428 | None:intergenic |
| TATGACTTGCTAGCCATGTT+TGG | 0.465171 | 8.4:+59814612 | MS.gene92436:CDS |
| ATGGCTTTGGGCTGCTGCAA+CGG | 0.467154 | 8.4:+59814907 | MS.gene92436:CDS |
| CTACCTTTCCTCACTCTGGC+GGG | 0.467292 | 8.4:+59812475 | MS.gene92436:CDS |
| GTGCTGTGAGAGATCTTAAG+AGG | 0.468743 | 8.4:+59812680 | MS.gene92436:CDS |
| CACCAGGTTCTATTATGCTA+TGG | 0.472726 | 8.4:+59816132 | MS.gene92436:intron |
| CTCCAATGCATTCAGGAGTA+AGG | 0.484839 | 8.4:-59816490 | None:intergenic |
| TGTTAAACTTATGTCATTCA+GGG | 0.485910 | 8.4:+59816545 | MS.gene92436:CDS |
| TATGAAAACGAGAAGGTCAA+TGG | 0.486866 | 8.4:+59816638 | MS.gene92436:CDS |
| TAGCCGTCTCATGGAGGCTC+AGG | 0.491464 | 8.4:+59816673 | MS.gene92436:CDS |
| TGCGGCAAATGGACGAGGTA+AGG | 0.498856 | 8.4:-59814585 | None:intergenic |
| GCTAGGACAAATTACAAGAA+AGG | 0.501930 | 8.4:+59815818 | MS.gene92436:CDS |
| AAATTACAAGAAAGGCGATC+AGG | 0.502432 | 8.4:+59815826 | MS.gene92436:CDS |
| AAACATCAGTTCTTCCATCA+AGG | 0.504879 | 8.4:-59814858 | None:intergenic |
| AGCTATGTCTTGCTGTGAAT+AGG | 0.511400 | 8.4:+59812773 | MS.gene92436:CDS |
| TTGGTAAGGGAAAGACTTCA+AGG | 0.512774 | 8.4:+59814556 | MS.gene92436:CDS |
| GTTTCTACCTTTCCTCACTC+TGG | 0.514945 | 8.4:+59812471 | MS.gene92436:CDS |
| TACATTATGAGCTTCTAAGA+AGG | 0.520589 | 8.4:-59816580 | None:intergenic |
| AAGAGAGTGTTGAGAATGGT+CGG | 0.528406 | 8.4:-59812424 | None:intergenic |
| GATGGAAATTAGCCGTCTCA+TGG | 0.528999 | 8.4:+59816664 | MS.gene92436:CDS |
| GCTGGTTGTTTATGCCCTGT+TGG | 0.537691 | 8.4:+59815620 | MS.gene92436:CDS |
| AACTTTGCGGCAAATGGACG+AGG | 0.537904 | 8.4:-59814590 | None:intergenic |
| GCTAGCAAGTCATAACTTTG+CGG | 0.538816 | 8.4:-59814603 | None:intergenic |
| AAGAACATGGAAGGTTTGAA+AGG | 0.542145 | 8.4:+59812349 | MS.gene92436:CDS |
| TACTAGCTGCGTTACGACTG+TGG | 0.542432 | 8.4:+59816316 | MS.gene92436:CDS |
| TTTCTCAAATTCACCAAACA+TGG | 0.542605 | 8.4:-59814625 | None:intergenic |
| TACCTTACTCCTGAATGCAT+TGG | 0.549106 | 8.4:+59816488 | MS.gene92436:CDS |
| GAAGTAGAAGTGTACATAGC+AGG | 0.549201 | 8.4:-59816240 | None:intergenic |
| AAGAACTGATGTTTAAGCCT+CGG | 0.551132 | 8.4:+59814867 | MS.gene92436:CDS |
| CTCAGAGACTAACTGATGGT+GGG | 0.556902 | 8.4:+59815762 | MS.gene92436:CDS |
| TTGTTTAATTACGATGCACC+TGG | 0.559289 | 8.4:+59815647 | MS.gene92436:CDS |
| ATACCAGATAGGTCCTCTCC+AGG | 0.561435 | 8.4:-59815665 | None:intergenic |
| ATCAGGTGGATGAAGCTATG+TGG | 0.568564 | 8.4:+59814783 | MS.gene92436:intron |
| TTTGAGCTTCTTGAACACTA+CGG | 0.569876 | 8.4:+59816168 | MS.gene92436:CDS |
| GTGTACATAGCAGGTTCCAA+AGG | 0.569923 | 8.4:-59816231 | None:intergenic |
| TCTACCTTTCCTCACTCTGG+CGG | 0.572108 | 8.4:+59812474 | MS.gene92436:CDS |
| CTCGGACATTGCATATACCA+TGG | 0.573706 | 8.4:+59815591 | MS.gene92436:CDS |
| CTACGTCGTCAATACCAGAT+AGG | 0.574667 | 8.4:-59815676 | None:intergenic |
| TTGTTATACGAAGTTGGTAA+GGG | 0.583923 | 8.4:+59814543 | MS.gene92436:CDS |
| TCAGGTGGATGAAGCTATGT+GGG | 0.588137 | 8.4:+59814784 | MS.gene92436:intron |
| TCGGACATTGCATATACCAT+GGG | 0.588653 | 8.4:+59815592 | MS.gene92436:CDS |
| GGTTTGAAAGGTTCTTAACA+TGG | 0.589973 | 8.4:+59812361 | MS.gene92436:CDS |
| TTGTTGAATCTGATATTCCA+AGG | 0.592444 | 8.4:-59812392 | None:intergenic |
| TCTCAGAGACTAACTGATGG+TGG | 0.592968 | 8.4:+59815761 | MS.gene92436:CDS |
| GCCAGTTACCCGCCAGAGTG+AGG | 0.593667 | 8.4:-59812483 | None:intergenic |
| GTATCGTCTTCAATAGATGT+TGG | 0.593968 | 8.4:-59816468 | None:intergenic |
| TAGAAGATGGAACAAGAACA+TGG | 0.594815 | 8.4:+59812336 | None:intergenic |
| TAATTACGATGCACCTGGAG+AGG | 0.595408 | 8.4:+59815652 | MS.gene92436:CDS |
| TGCTGTGAGAGATCTTAAGA+GGG | 0.596123 | 8.4:+59812681 | MS.gene92436:CDS |
| TGTACATAGCAGGTTCCAAA+GGG | 0.596868 | 8.4:-59816230 | None:intergenic |
| TAACAGAGACTGAACTTGCA+GGG | 0.598802 | 8.4:-59814652 | None:intergenic |
| CATTCTCAGAGACTAACTGA+TGG | 0.601638 | 8.4:+59815758 | MS.gene92436:CDS |
| CATATACCATGGGATGAAGC+TGG | 0.602506 | 8.4:+59815602 | MS.gene92436:CDS |
| AGATGGAACAAGAACATGGA+AGG | 0.604086 | 8.4:+59812340 | None:intergenic |
| CATAATAAAAGGAGGTCTGT+CGG | 0.606789 | 8.4:+59816348 | MS.gene92436:CDS |
| AAATGGAGACAAGAATGGAA+TGG | 0.608545 | 8.4:+59815712 | MS.gene92436:CDS |
| ATACCTGAGCCTCCATGAGA+CGG | 0.619857 | 8.4:-59816676 | None:intergenic |
| GCAGAGAGAATGACCAAGAG+AGG | 0.631070 | 8.4:-59812448 | None:intergenic |
| AAACAACCAGCTTCATCCCA+TGG | 0.633574 | 8.4:-59815608 | None:intergenic |
| TTTCATCTATGAAAACGAGA+AGG | 0.633735 | 8.4:+59816631 | MS.gene92436:CDS |
| ACTAGCTGCGTTACGACTGT+GGG | 0.639311 | 8.4:+59816317 | MS.gene92436:CDS |
| TTAACATGGACATCACACCT+TGG | 0.645130 | 8.4:+59812375 | MS.gene92436:CDS |
| TCACTCTATATCCATCCCAA+CGG | 0.653728 | 8.4:+59816276 | MS.gene92436:CDS |
| TTACCCGCCAGAGTGAGGAA+AGG | 0.662573 | 8.4:-59812478 | None:intergenic |
| CAACCCCTCATAATAAAAGG+AGG | 0.668522 | 8.4:+59816340 | MS.gene92436:CDS |
| GCAGCTAGTAGCGCAAACGA+AGG | 0.670133 | 8.4:-59816303 | None:intergenic |
| GGAAATTAGCCGTCTCATGG+AGG | 0.680251 | 8.4:+59816667 | MS.gene92436:CDS |
| GCTGTGAGAGATCTTAAGAG+GGG | 0.713261 | 8.4:+59812682 | MS.gene92436:CDS |
| AATTAAACAAGTCACCAACA+GGG | 0.716642 | 8.4:-59815634 | None:intergenic |
| GTAAGGGAAAGACTTCAAGG+TGG | 0.809146 | 8.4:+59814559 | MS.gene92436:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATTCTAACAAAAAAAT+TGG | - | chr8.4:59814380-59814399 | None:intergenic | 10.0% |
| !! | AATTAAATACAAAAAACTAT+TGG | - | chr8.4:59813164-59813183 | None:intergenic | 10.0% |
| !! | ATTTATGATAAAATTTATTC+AGG | - | chr8.4:59815923-59815942 | None:intergenic | 10.0% |
| !! | TTTATGATAAAATTTATTCA+GGG | - | chr8.4:59815922-59815941 | None:intergenic | 10.0% |
| !! | AAACCAAAACAAAAATAAAA+GGG | - | chr8.4:59814948-59814967 | None:intergenic | 15.0% |
| !! | ATTTAATTCTTGAAATTGTA+AGG | + | chr8.4:59813176-59813195 | MS.gene92436:intron | 15.0% |
| !! | CGAATTAGAAAATATTTATA+CGG | - | chr8.4:59816033-59816052 | None:intergenic | 15.0% |
| !! | TAAACCAAAACAAAAATAAA+AGG | - | chr8.4:59814949-59814968 | None:intergenic | 15.0% |
| !!! | ATTTTTTAGTTTATCTCATT+AGG | + | chr8.4:59814677-59814696 | MS.gene92436:intron | 15.0% |
| !! | AATAAGAGATACAATCAATA+AGG | - | chr8.4:59816710-59816729 | None:intergenic | 20.0% |
| !! | AATTGAATATGTAAACCTAA+TGG | - | chr8.4:59815883-59815902 | None:intergenic | 20.0% |
| !! | AGCATAAAGTAAAAAACTAA+CGG | - | chr8.4:59814482-59814501 | None:intergenic | 20.0% |
| !! | TGATGTATGATTTCAATTTA+GGG | + | chr8.4:59813317-59813336 | MS.gene92436:intron | 20.0% |
| !! | TTCTAACAAAAAAATTGGAT+TGG | - | chr8.4:59814375-59814394 | None:intergenic | 20.0% |
| !!! | ATTTTTCTATTCCTTTAGAT+CGG | + | chr8.4:59813256-59813275 | MS.gene92436:intron | 20.0% |
| !!! | GAAATTTTAACATAACCATT+AGG | + | chr8.4:59815865-59815884 | MS.gene92436:intron | 20.0% |
| !!! | GTAGATAATTTTCAATCAAA+TGG | + | chr8.4:59815695-59815714 | MS.gene92436:CDS | 20.0% |
| !!! | TAAGTTATTTCTATAGCAAA+AGG | - | chr8.4:59814230-59814249 | None:intergenic | 20.0% |
| !!! | TAATTTTAATTACCTTCCAT+TGG | + | chr8.4:59814341-59814360 | MS.gene92436:intron | 20.0% |
| !!! | TATCCTCTATTTTATGTTAT+CGG | + | chr8.4:59815285-59815304 | MS.gene92436:intron | 20.0% |
| ! | AACAAATTGAGGACTATAAA+AGG | - | chr8.4:59813549-59813568 | None:intergenic | 25.0% |
| ! | AATAACTCATCTTTATGTTG+TGG | + | chr8.4:59814758-59814777 | MS.gene92436:intron | 25.0% |
| ! | AATGTTGTAACAGACTTATT+GGG | + | chr8.4:59815379-59815398 | MS.gene92436:intron | 25.0% |
| ! | AATTTGATCCATGAAATAGT+AGG | + | chr8.4:59812912-59812931 | MS.gene92436:intron | 25.0% |
| ! | ATCTGCAATATAAAAAAGCT+CGG | - | chr8.4:59814510-59814529 | None:intergenic | 25.0% |
| ! | ATGAAATCATCGTTATGAAA+TGG | + | chr8.4:59816409-59816428 | MS.gene92436:CDS | 25.0% |
| ! | ATTGAAATCATACATCACAT+TGG | - | chr8.4:59813314-59813333 | None:intergenic | 25.0% |
| ! | CATTAGGTTAGATTATATCT+TGG | + | chr8.4:59814693-59814712 | MS.gene92436:intron | 25.0% |
| ! | CCAAAACAATACAACAAAAA+TGG | - | chr8.4:59812637-59812656 | None:intergenic | 25.0% |
| ! | CTACATTATAATGTTGTCAA+CGG | - | chr8.4:59815158-59815177 | None:intergenic | 25.0% |
| ! | GGAAGGTAATTAAAATTAAG+AGG | - | chr8.4:59814339-59814358 | None:intergenic | 25.0% |
| ! | GTGATGTATGATTTCAATTT+AGG | + | chr8.4:59813316-59813335 | MS.gene92436:intron | 25.0% |
| ! | TACAAAAAGCTAAATCAGAA+TGG | + | chr8.4:59814822-59814841 | MS.gene92436:CDS | 25.0% |
| ! | TGTTAAACTTATGTCATTCA+GGG | + | chr8.4:59816545-59816564 | MS.gene92436:CDS | 25.0% |
| ! | TGTTAGAATTATTGTATGCA+TGG | + | chr8.4:59814387-59814406 | MS.gene92436:intron | 25.0% |
| ! | TTGTAATTTCATTAACAGCA+GGG | - | chr8.4:59813217-59813236 | None:intergenic | 25.0% |
| ! | TTGTTAAACTTATGTCATTC+AGG | + | chr8.4:59816544-59816563 | MS.gene92436:CDS | 25.0% |
| ! | TTTACTCATGACAAGTAAAA+TGG | - | chr8.4:59815509-59815528 | None:intergenic | 25.0% |
| ! | TTTGTAATTTCATTAACAGC+AGG | - | chr8.4:59813218-59813237 | None:intergenic | 25.0% |
| !! | TTTAAGTCTTAGAGTATTCT+TGG | - | chr8.4:59813469-59813488 | None:intergenic | 25.0% |
| !!! | AAACTTTGCATTTGTTTTCT+TGG | + | chr8.4:59812546-59812565 | MS.gene92436:intron | 25.0% |
| !!! | AACTTTGCATTTGTTTTCTT+GGG | + | chr8.4:59812547-59812566 | MS.gene92436:intron | 25.0% |
| !!! | ATTGATTCATTTTGTGTTCT+TGG | + | chr8.4:59815472-59815491 | MS.gene92436:intron | 25.0% |
| !!! | CCATTTTTGTTGTATTGTTT+TGG | + | chr8.4:59812634-59812653 | MS.gene92436:intron | 25.0% |
| !!! | TGTTCTGTTCATGTTTTTTT+AGG | + | chr8.4:59812854-59812873 | MS.gene92436:intron | 25.0% |
| AACTTAACATGCTTGACATT+TGG | - | chr8.4:59813938-59813957 | None:intergenic | 30.0% | |
| AATTAAACAAGTCACCAACA+GGG | - | chr8.4:59815637-59815656 | None:intergenic | 30.0% | |
| ACATGAACAGAACAAAAACT+TGG | - | chr8.4:59812848-59812867 | None:intergenic | 30.0% | |
| ATAAGTGCTCATCATGATAA+GGG | + | chr8.4:59814253-59814272 | MS.gene92436:intron | 30.0% | |
| ATCTTTATGTTGTGGTTATC+AGG | + | chr8.4:59814766-59814785 | MS.gene92436:intron | 30.0% | |
| ATGTTGTAACAGACTTATTG+GGG | + | chr8.4:59815380-59815399 | MS.gene92436:intron | 30.0% | |
| CAAGCAAAAGATTTCAAGAA+TGG | - | chr8.4:59815340-59815359 | None:intergenic | 30.0% | |
| CAATGTTGTAACAGACTTAT+TGG | + | chr8.4:59815378-59815397 | MS.gene92436:intron | 30.0% | |
| CCAAAACAAAAATAAAAGGG+AGG | - | chr8.4:59814945-59814964 | None:intergenic | 30.0% | |
| CGACATTGCAAAATGTTAAT+CGG | + | chr8.4:59812983-59813002 | MS.gene92436:intron | 30.0% | |
| CTCTTATTGCAATGTAATAC+TGG | + | chr8.4:59816722-59816741 | MS.gene92436:CDS | 30.0% | |
| GACTAAATTAACCGATCTAA+AGG | - | chr8.4:59813270-59813289 | None:intergenic | 30.0% | |
| GATACATTCCTACTATTTCA+TGG | - | chr8.4:59812923-59812942 | None:intergenic | 30.0% | |
| GTAGACTACAAACTATTACA+GGG | + | chr8.4:59815991-59816010 | MS.gene92436:intron | 30.0% | |
| GTAGCGAAATTTGAACAAAT+CGG | + | chr8.4:59815174-59815193 | MS.gene92436:intron | 30.0% | |
| TAATTAAACAAGTCACCAAC+AGG | - | chr8.4:59815638-59815657 | None:intergenic | 30.0% | |
| TCAAAAACCAGATATCTTCT+CGG | + | chr8.4:59815573-59815592 | MS.gene92436:intron | 30.0% | |
| TGTAGACTACAAACTATTAC+AGG | + | chr8.4:59815990-59816009 | MS.gene92436:intron | 30.0% | |
| TTCTTGGGTGATTAATCAAA+GGG | + | chr8.4:59812562-59812581 | MS.gene92436:intron | 30.0% | |
| TTGTTGAATCTGATATTCCA+AGG | - | chr8.4:59812395-59812414 | None:intergenic | 30.0% | |
| TTTATGAACTGGACTGATAT+GGG | - | chr8.4:59813988-59814007 | None:intergenic | 30.0% | |
| TTTCATCTATGAAAACGAGA+AGG | + | chr8.4:59816631-59816650 | MS.gene92436:CDS | 30.0% | |
| TTTCTCAAATTCACCAAACA+TGG | - | chr8.4:59814628-59814647 | None:intergenic | 30.0% | |
| TTTCTTGGGTGATTAATCAA+AGG | + | chr8.4:59812561-59812580 | MS.gene92436:intron | 30.0% | |
| ! | CTAGTCATTAAAGCAGATTT+TGG | - | chr8.4:59812727-59812746 | None:intergenic | 30.0% |
| ! | GGGATGAAAATTTTGTCATT+TGG | - | chr8.4:59816213-59816232 | None:intergenic | 30.0% |
| ! | TACATTATGAGCTTCTAAGA+AGG | - | chr8.4:59816583-59816602 | None:intergenic | 30.0% |
| ! | TGACAAAATTTTCATCCCTT+TGG | + | chr8.4:59816215-59816234 | MS.gene92436:CDS | 30.0% |
| !! | ATGCATATTGCTTTTATGCT+AGG | + | chr8.4:59815801-59815820 | MS.gene92436:CDS | 30.0% |
| !! | GGTTTTTAACATTTAAGGCA+TGG | + | chr8.4:59814888-59814907 | MS.gene92436:CDS | 30.0% |
| !! | TTGTTATACGAAGTTGGTAA+GGG | + | chr8.4:59814543-59814562 | MS.gene92436:CDS | 30.0% |
| !!! | CCTCCCTTTTATTTTTGTTT+TGG | + | chr8.4:59814942-59814961 | MS.gene92436:intron | 30.0% |
| AAACATCAGTTCTTCCATCA+AGG | - | chr8.4:59814861-59814880 | None:intergenic | 35.0% | |
| AAATGGAGACAAGAATGGAA+TGG | + | chr8.4:59815712-59815731 | MS.gene92436:CDS | 35.0% | |
| AAATTACAAGAAAGGCGATC+AGG | + | chr8.4:59815826-59815845 | MS.gene92436:CDS | 35.0% | |
| AAGAACATGGAAGGTTTGAA+AGG | + | chr8.4:59812349-59812368 | MS.gene92436:CDS | 35.0% | |
| AAGAACTGATGTTTAAGCCT+CGG | + | chr8.4:59814867-59814886 | MS.gene92436:CDS | 35.0% | |
| AAGAAGAAAAACCTGAACAG+AGG | - | chr8.4:59812812-59812831 | None:intergenic | 35.0% | |
| AATAAGTTGTGTGTCCAAAC+AGG | + | chr8.4:59814294-59814313 | MS.gene92436:intron | 35.0% | |
| AATAGAACCTGGTGAAAACA+AGG | - | chr8.4:59816126-59816145 | None:intergenic | 35.0% | |
| ACCTAATTAACAGGTGCTAA+TGG | + | chr8.4:59813132-59813151 | MS.gene92436:intron | 35.0% | |
| ATCTTCATTCCACTGTTTAG+TGG | + | chr8.4:59816082-59816101 | MS.gene92436:intron | 35.0% | |
| CAATCAAATGGAGACAAGAA+TGG | + | chr8.4:59815707-59815726 | MS.gene92436:CDS | 35.0% | |
| CATAAGTGCTCATCATGATA+AGG | + | chr8.4:59814252-59814271 | MS.gene92436:intron | 35.0% | |
| CATAATAAAAGGAGGTCTGT+CGG | + | chr8.4:59816348-59816367 | MS.gene92436:CDS | 35.0% | |
| CATTATAATGTTGTCAACGG+CGG | - | chr8.4:59815155-59815174 | None:intergenic | 35.0% | |
| CTATGTACACTTCTACTTCA+TGG | + | chr8.4:59816244-59816263 | MS.gene92436:CDS | 35.0% | |
| GCCTTAAATGTTAAAAACCG+AGG | - | chr8.4:59814887-59814906 | None:intergenic | 35.0% | |
| GCTAGGACAAATTACAAGAA+AGG | + | chr8.4:59815818-59815837 | MS.gene92436:CDS | 35.0% | |
| GGTTTGAAAGGTTCTTAACA+TGG | + | chr8.4:59812361-59812380 | MS.gene92436:CDS | 35.0% | |
| GTATCGTCTTCAATAGATGT+TGG | - | chr8.4:59816471-59816490 | None:intergenic | 35.0% | |
| GTTTATGAACTGGACTGATA+TGG | - | chr8.4:59813989-59814008 | None:intergenic | 35.0% | |
| TAGGAGGAGCTTTCAATTTA+GGG | + | chr8.4:59813386-59813405 | MS.gene92436:intron | 35.0% | |
| TATGAAAACGAGAAGGTCAA+TGG | + | chr8.4:59816638-59816657 | MS.gene92436:CDS | 35.0% | |
| TCCATTAGCACCTGTTAATT+AGG | - | chr8.4:59813136-59813155 | None:intergenic | 35.0% | |
| TCGCCGATAACATAAAATAG+AGG | - | chr8.4:59815291-59815310 | None:intergenic | 35.0% | |
| TGATGAAACCAAATCCTAAC+AGG | - | chr8.4:59814435-59814454 | None:intergenic | 35.0% | |
| TGTGCAATGTTAGAGACTAA+TGG | + | chr8.4:59814023-59814042 | MS.gene92436:intron | 35.0% | |
| TTAACATGCTTGACATTTGG+TGG | - | chr8.4:59813935-59813954 | None:intergenic | 35.0% | |
| TTAGAGACTAATGGTCTGTT+TGG | + | chr8.4:59814032-59814051 | MS.gene92436:intron | 35.0% | |
| TTCCATAGCATAATAGAACC+TGG | - | chr8.4:59816137-59816156 | None:intergenic | 35.0% | |
| TTGGTTCAATAACCAATGGA+AGG | - | chr8.4:59814356-59814375 | None:intergenic | 35.0% | |
| TTGTTTAATTACGATGCACC+TGG | + | chr8.4:59815647-59815666 | MS.gene92436:CDS | 35.0% | |
| TTTATGTTGTGGTTATCAGG+TGG | + | chr8.4:59814769-59814788 | MS.gene92436:intron | 35.0% | |
| TTTGAGCTTCTTGAACACTA+CGG | + | chr8.4:59816168-59816187 | MS.gene92436:CDS | 35.0% | |
| ! | AAATCTTTTGCTTGCCTTTC+TGG | + | chr8.4:59815346-59815365 | MS.gene92436:intron | 35.0% |
| ! | AACATTTAAGGCATGGCTTT+GGG | + | chr8.4:59814895-59814914 | MS.gene92436:CDS | 35.0% |
| ! | ACAGACCTCCTTTTATTATG+AGG | - | chr8.4:59816348-59816367 | None:intergenic | 35.0% |
| ! | AGACCTCCTTTTATTATGAG+GGG | - | chr8.4:59816346-59816365 | None:intergenic | 35.0% |
| ! | AGGCAATTTGGTTTATGAAC+TGG | - | chr8.4:59813999-59814018 | None:intergenic | 35.0% |
| ! | ATAAGTGTTGTGAGACTGTT+TGG | + | chr8.4:59814083-59814102 | MS.gene92436:intron | 35.0% |
| ! | ATTCCACTGTTTAGTGGATA+AGG | + | chr8.4:59816088-59816107 | MS.gene92436:intron | 35.0% |
| ! | CAGACCTCCTTTTATTATGA+GGG | - | chr8.4:59816347-59816366 | None:intergenic | 35.0% |
| ! | GCCTCGGTTTTTAACATTTA+AGG | + | chr8.4:59814883-59814902 | MS.gene92436:CDS | 35.0% |
| ! | TAACATTTAAGGCATGGCTT+TGG | + | chr8.4:59814894-59814913 | MS.gene92436:CDS | 35.0% |
| ! | TAAGTGTTGTGAGACTGTTT+GGG | + | chr8.4:59814084-59814103 | MS.gene92436:intron | 35.0% |
| ! | TGCAATGACGTTTTATATGG+TGG | + | chr8.4:59815117-59815136 | MS.gene92436:intron | 35.0% |
| !! | CCTCAATTTGTTGACTTGAT+GGG | + | chr8.4:59813557-59813576 | MS.gene92436:intron | 35.0% |
| !! | CTTGTTATACGAAGTTGGTA+AGG | + | chr8.4:59814542-59814561 | MS.gene92436:CDS | 35.0% |
| !! | GCTGTTTTCATAAGCTATCT+TGG | - | chr8.4:59814174-59814193 | None:intergenic | 35.0% |
| !! | GTTTGCTTGTTATACGAAGT+TGG | + | chr8.4:59814537-59814556 | MS.gene92436:CDS | 35.0% |
| !! | TATGAAGCGTCGTCAAATAA+CGG | + | chr8.4:59815222-59815241 | MS.gene92436:intron | 35.0% |
| !! | TCCTCAATTTGTTGACTTGA+TGG | + | chr8.4:59813556-59813575 | MS.gene92436:intron | 35.0% |
| !! | TGGATTGGTTCAATAACCAA+TGG | - | chr8.4:59814360-59814379 | None:intergenic | 35.0% |
| AACAGAGTCTGATCAAGAGA+CGG | + | chr8.4:59813109-59813128 | MS.gene92436:intron | 40.0% | |
| AAGAGACGGACCTAATTAAC+AGG | + | chr8.4:59813123-59813142 | MS.gene92436:intron | 40.0% | |
| ACAAATGTCTACGCCTTAAC+AGG | - | chr8.4:59813879-59813898 | None:intergenic | 40.0% | |
| ACATCACATTGGACTCATGA+AGG | - | chr8.4:59813303-59813322 | None:intergenic | 40.0% | |
| AGAATGTTGCAGTAGAGGTT+TGG | + | chr8.4:59812657-59812676 | MS.gene92436:intron | 40.0% | |
| AGGTCATGAGACACTTGAAT+GGG | + | chr8.4:59813752-59813771 | MS.gene92436:intron | 40.0% | |
| AGTCATAACTTTGCGGCAAA+TGG | - | chr8.4:59814599-59814618 | None:intergenic | 40.0% | |
| ATCAGGTAGTGCACAATTCT+TGG | + | chr8.4:59815843-59815862 | MS.gene92436:intron | 40.0% | |
| ATGCCTTATCCACTAAACAG+TGG | - | chr8.4:59816094-59816113 | None:intergenic | 40.0% | |
| ATTGCACACTTCAGGCAATT+TGG | - | chr8.4:59814011-59814030 | None:intergenic | 40.0% | |
| CACCAGGTTCTATTATGCTA+TGG | + | chr8.4:59816132-59816151 | MS.gene92436:intron | 40.0% | |
| CACTTCTACTTCATGGTCTA+AGG | + | chr8.4:59816251-59816270 | MS.gene92436:CDS | 40.0% | |
| CATTCTCAGAGACTAACTGA+TGG | + | chr8.4:59815758-59815777 | MS.gene92436:CDS | 40.0% | |
| CATTGATCCAAGTACCAGAA+AGG | - | chr8.4:59815363-59815382 | None:intergenic | 40.0% | |
| CCCATCAAGTCAACAAATTG+AGG | - | chr8.4:59813560-59813579 | None:intergenic | 40.0% | |
| CTAAATTGAAAGCTCCTCCT+AGG | - | chr8.4:59813387-59813406 | None:intergenic | 40.0% | |
| CTAGGAGGAGCTTTCAATTT+AGG | + | chr8.4:59813385-59813404 | MS.gene92436:intron | 40.0% | |
| CTGTGCAAATCAGCTTATTG+TGG | - | chr8.4:59813779-59813798 | None:intergenic | 40.0% | |
| CTTGACCATTTAGACCTGTT+TGG | - | chr8.4:59814311-59814330 | None:intergenic | 40.0% | |
| GAAACCAAATCCTAACAGGT+GGG | - | chr8.4:59814431-59814450 | None:intergenic | 40.0% | |
| GAATGTTGCAGTAGAGGTTT+GGG | + | chr8.4:59812658-59812677 | MS.gene92436:intron | 40.0% | |
| GACTAATGGTCTGTTTGGAT+TGG | + | chr8.4:59814037-59814056 | MS.gene92436:intron | 40.0% | |
| GACTATAAAAGGAGACCCTT+AGG | - | chr8.4:59813538-59813557 | None:intergenic | 40.0% | |
| GCAACAACTGTGTGTGAATT+AGG | + | chr8.4:59813603-59813622 | MS.gene92436:intron | 40.0% | |
| GCTAGCAAGTCATAACTTTG+CGG | - | chr8.4:59814606-59814625 | None:intergenic | 40.0% | |
| TAACAGAGACTGAACTTGCA+GGG | - | chr8.4:59814655-59814674 | None:intergenic | 40.0% | |
| TACCTTACTCCTGAATGCAT+TGG | + | chr8.4:59816488-59816507 | MS.gene92436:CDS | 40.0% | |
| TATAAAAGGAGACCCTTAGG+AGG | - | chr8.4:59813535-59813554 | None:intergenic | 40.0% | |
| TCACTCTATATCCATCCCAA+CGG | + | chr8.4:59816276-59816295 | MS.gene92436:CDS | 40.0% | |
| TCATACTGAGTAGCGTAAAG+TGG | - | chr8.4:59815207-59815226 | None:intergenic | 40.0% | |
| TCGGACATTGCATATACCAT+GGG | + | chr8.4:59815592-59815611 | MS.gene92436:CDS | 40.0% | |
| TCTCTAACATTGCACACTTC+AGG | - | chr8.4:59814019-59814038 | None:intergenic | 40.0% | |
| TGAAACCAAATCCTAACAGG+TGG | - | chr8.4:59814432-59814451 | None:intergenic | 40.0% | |
| TGCTGTGAGAGATCTTAAGA+GGG | + | chr8.4:59812681-59812700 | MS.gene92436:CDS | 40.0% | |
| TGTACATAGCAGGTTCCAAA+GGG | - | chr8.4:59816233-59816252 | None:intergenic | 40.0% | |
| TGTGTCCAAACAGGTCTAAA+TGG | + | chr8.4:59814303-59814322 | MS.gene92436:intron | 40.0% | |
| TTAACATGGACATCACACCT+TGG | + | chr8.4:59812375-59812394 | MS.gene92436:CDS | 40.0% | |
| TTATCGGCGATTGACATCAT+TGG | + | chr8.4:59815301-59815320 | MS.gene92436:intron | 40.0% | |
| TTGGTAAGGGAAAGACTTCA+AGG | + | chr8.4:59814556-59814575 | MS.gene92436:CDS | 40.0% | |
| TTGTTCACGTGTTACAACAG+TGG | + | chr8.4:59813356-59813375 | MS.gene92436:intron | 40.0% | |
| TTTGGAGAATGTTGCAGTAG+AGG | + | chr8.4:59812652-59812671 | MS.gene92436:intron | 40.0% | |
| ! | AATCGGATTTGTTCCTCTGT+TGG | + | chr8.4:59813000-59813019 | MS.gene92436:intron | 40.0% |
| ! | AGAATGGCGAGGCAAATTTT+AGG | + | chr8.4:59815040-59815059 | MS.gene92436:intron | 40.0% |
| ! | AGCTATGTCTTGCTGTGAAT+AGG | + | chr8.4:59812773-59812792 | MS.gene92436:CDS | 40.0% |
| ! | GAAGTAGAAGTGTACATAGC+AGG | - | chr8.4:59816243-59816262 | None:intergenic | 40.0% |
| ! | GGCTGCAATGACGTTTTATA+TGG | + | chr8.4:59815114-59815133 | MS.gene92436:intron | 40.0% |
| !! | AAGAGAGTGTTGAGAATGGT+CGG | - | chr8.4:59812427-59812446 | None:intergenic | 40.0% |
| !! | ACATTTGGTGGACTGTAAAC+TGG | - | chr8.4:59813923-59813942 | None:intergenic | 40.0% |
| !! | AGGAAAGAGAGTGTTGAGAA+TGG | - | chr8.4:59812431-59812450 | None:intergenic | 40.0% |
| !! | TATGACTTGCTAGCCATGTT+TGG | + | chr8.4:59814612-59814631 | MS.gene92436:CDS | 40.0% |
| !! | TCGTCAAATAACGGATAGAG+CGG | + | chr8.4:59815231-59815250 | MS.gene92436:intron | 40.0% |
| !!! | CAAGTTACCTTGTTTTCACC+AGG | + | chr8.4:59816116-59816135 | MS.gene92436:intron | 40.0% |
| AAACAACCAGCTTCATCCCA+TGG | - | chr8.4:59815611-59815630 | None:intergenic | 45.0% | |
| ACCAAACGTCAAGCCTGTTA+AGG | + | chr8.4:59813863-59813882 | MS.gene92436:intron | 45.0% | |
| AGCGTAGCAGTGTGGTTAAA+TGG | + | chr8.4:59814996-59815015 | MS.gene92436:intron | 45.0% | |
| ATAATGTTGTCAACGGCGGA+AGG | - | chr8.4:59815151-59815170 | None:intergenic | 45.0% | |
| ATCAGGTGGATGAAGCTATG+TGG | + | chr8.4:59814783-59814802 | MS.gene92436:intron | 45.0% | |
| ATGCTCTGATTTCACGTGTC+AGG | - | chr8.4:59813695-59813714 | None:intergenic | 45.0% | |
| CAACACTCTCTTTCCTCTCT+TGG | + | chr8.4:59812435-59812454 | MS.gene92436:CDS | 45.0% | |
| CAGGTCATGAGACACTTGAA+TGG | + | chr8.4:59813751-59813770 | MS.gene92436:intron | 45.0% | |
| CATATACCATGGGATGAAGC+TGG | + | chr8.4:59815602-59815621 | MS.gene92436:CDS | 45.0% | |
| CGAGAAGGTCAATGGATAGA+TGG | + | chr8.4:59816646-59816665 | MS.gene92436:CDS | 45.0% | |
| CTAACAGAGACTGAACTTGC+AGG | - | chr8.4:59814656-59814675 | None:intergenic | 45.0% | |
| CTACGTCGTCAATACCAGAT+AGG | - | chr8.4:59815679-59815698 | None:intergenic | 45.0% | |
| CTCAGAGACTAACTGATGGT+GGG | + | chr8.4:59815762-59815781 | MS.gene92436:CDS | 45.0% | |
| CTCCAATGCATTCAGGAGTA+AGG | - | chr8.4:59816493-59816512 | None:intergenic | 45.0% | |
| CTCGGACATTGCATATACCA+TGG | + | chr8.4:59815591-59815610 | MS.gene92436:CDS | 45.0% | |
| GAAAGAAGCTCATGCCTTGA+TGG | + | chr8.4:59814844-59814863 | MS.gene92436:CDS | 45.0% | |
| GACTACACTCCAATGCATTC+AGG | - | chr8.4:59816500-59816519 | None:intergenic | 45.0% | |
| GATGGAAATTAGCCGTCTCA+TGG | + | chr8.4:59816664-59816683 | MS.gene92436:CDS | 45.0% | |
| GCAATGTCCGAGAAGATATC+TGG | - | chr8.4:59815583-59815602 | None:intergenic | 45.0% | |
| GCTGTGAGAGATCTTAAGAG+GGG | + | chr8.4:59812682-59812701 | MS.gene92436:CDS | 45.0% | |
| GTAAGGGAAAGACTTCAAGG+TGG | + | chr8.4:59814559-59814578 | MS.gene92436:CDS | 45.0% | |
| GTAGCAGTGTGGTTAAATGG+TGG | + | chr8.4:59814999-59815018 | MS.gene92436:intron | 45.0% | |
| GTGCTGTGAGAGATCTTAAG+AGG | + | chr8.4:59812680-59812699 | MS.gene92436:CDS | 45.0% | |
| GTGTACATAGCAGGTTCCAA+AGG | - | chr8.4:59816234-59816253 | None:intergenic | 45.0% | |
| GTGTGGTTAAATGGTGGTCA+TGG | + | chr8.4:59815005-59815024 | MS.gene92436:intron | 45.0% | |
| GTTCCTACGAATACCAACAG+AGG | - | chr8.4:59813016-59813035 | None:intergenic | 45.0% | |
| GTTCCTCTGTTGGTATTCGT+AGG | + | chr8.4:59813010-59813029 | MS.gene92436:intron | 45.0% | |
| GTTTCTACCTTTCCTCACTC+TGG | + | chr8.4:59812471-59812490 | MS.gene92436:CDS | 45.0% | |
| TAAAACGTCATTGCAGCCCA+TGG | - | chr8.4:59815112-59815131 | None:intergenic | 45.0% | |
| TAAACTGGTATGGGTCGATC+AGG | - | chr8.4:59813908-59813927 | None:intergenic | 45.0% | |
| TAATTACGATGCACCTGGAG+AGG | + | chr8.4:59815652-59815671 | MS.gene92436:CDS | 45.0% | |
| TCAGGTGGATGAAGCTATGT+GGG | + | chr8.4:59814784-59814803 | MS.gene92436:intron | 45.0% | |
| TCTCAGAGACTAACTGATGG+TGG | + | chr8.4:59815761-59815780 | MS.gene92436:CDS | 45.0% | |
| TTAACAGGCTTGACGTTTGG+TGG | - | chr8.4:59813864-59813883 | None:intergenic | 45.0% | |
| TTGTGAATGAATGCCCACCA+TGG | + | chr8.4:59815081-59815100 | MS.gene92436:intron | 45.0% | |
| ! | GCAAACGAAGGTTTTCCGTT+GGG | - | chr8.4:59816294-59816313 | None:intergenic | 45.0% |
| ! | TTGCTTGCCTTTCTGGTACT+TGG | + | chr8.4:59815353-59815372 | MS.gene92436:intron | 45.0% |
| !! | GGTGGACTGTAAACTGGTAT+GGG | - | chr8.4:59813917-59813936 | None:intergenic | 45.0% |
| !! | TGGTGGACTGTAAACTGGTA+TGG | - | chr8.4:59813918-59813937 | None:intergenic | 45.0% |
| AACTTTGCGGCAAATGGACG+AGG | - | chr8.4:59814593-59814612 | None:intergenic | 50.0% | |
| ACTAGCTGCGTTACGACTGT+GGG | + | chr8.4:59816317-59816336 | MS.gene92436:CDS | 50.0% | |
| ATACCAGATAGGTCCTCTCC+AGG | - | chr8.4:59815668-59815687 | None:intergenic | 50.0% | |
| ATACCTGAGCCTCCATGAGA+CGG | - | chr8.4:59816679-59816698 | None:intergenic | 50.0% | |
| ATGAGCGTAAGTGCCTCCTA+AGG | + | chr8.4:59813519-59813538 | MS.gene92436:intron | 50.0% | |
| CTCTTCTCTCTCCTCTGTTC+AGG | + | chr8.4:59812798-59812817 | MS.gene92436:CDS | 50.0% | |
| GACCATAGTCACACCAACCA+TGG | - | chr8.4:59813822-59813841 | None:intergenic | 50.0% | |
| GCAGAGAGAATGACCAAGAG+AGG | - | chr8.4:59812451-59812470 | None:intergenic | 50.0% | |
| GCCTTAACAGGCTTGACGTT+TGG | - | chr8.4:59813867-59813886 | None:intergenic | 50.0% | |
| GCTGGTTGTTTATGCCCTGT+TGG | + | chr8.4:59815620-59815639 | MS.gene92436:CDS | 50.0% | |
| GGAAATTAGCCGTCTCATGG+AGG | + | chr8.4:59816667-59816686 | MS.gene92436:CDS | 50.0% | |
| GTATTCTTGGAGCTCCTCCT+AGG | - | chr8.4:59813456-59813475 | None:intergenic | 50.0% | |
| GTCGGACGTCTTGCATATTC+TGG | + | chr8.4:59816366-59816385 | MS.gene92436:CDS | 50.0% | |
| GTTGCTATAGCGTAGCAGTG+TGG | + | chr8.4:59814988-59815007 | MS.gene92436:intron | 50.0% | |
| TACTAGCTGCGTTACGACTG+TGG | + | chr8.4:59816316-59816335 | MS.gene92436:CDS | 50.0% | |
| TCTACCTTTCCTCACTCTGG+CGG | + | chr8.4:59812474-59812493 | MS.gene92436:CDS | 50.0% | |
| TGAGCCCACCTGTTAGGATT+TGG | + | chr8.4:59814424-59814443 | MS.gene92436:intron | 50.0% | |
| TGAGCGTAAGTGCCTCCTAA+GGG | + | chr8.4:59813520-59813539 | MS.gene92436:intron | 50.0% | |
| TTACAACAGTGGAGCTGCCT+AGG | + | chr8.4:59813367-59813386 | MS.gene92436:intron | 50.0% | |
| ! | AACAGGTGGGCTCAATGCTT+TGG | - | chr8.4:59814418-59814437 | None:intergenic | 50.0% |
| ! | ACGAAGGTTTTCCGTTGGGA+TGG | - | chr8.4:59816290-59816309 | None:intergenic | 50.0% |
| ! | CGCAAACGAAGGTTTTCCGT+TGG | - | chr8.4:59816295-59816314 | None:intergenic | 50.0% |
| ! | CTGATTTGCACAGCCCAGTT+GGG | + | chr8.4:59813786-59813805 | MS.gene92436:intron | 50.0% |
| ! | TGATTTGCACAGCCCAGTTG+GGG | + | chr8.4:59813787-59813806 | MS.gene92436:intron | 50.0% |
| ! | TGCCATGGTTGGTGTGACTA+TGG | + | chr8.4:59813817-59813836 | MS.gene92436:intron | 50.0% |
| !! | AAGCATTGAGCCCACCTGTT+AGG | + | chr8.4:59814418-59814437 | MS.gene92436:intron | 50.0% |
| !! | ACGTTTGGTGGACTGTGGTT+TGG | - | chr8.4:59813852-59813871 | None:intergenic | 50.0% |
| CTACCTTTCCTCACTCTGGC+GGG | + | chr8.4:59812475-59812494 | MS.gene92436:CDS | 55.0% | |
| GATTTGCACAGCCCAGTTGG+GGG | + | chr8.4:59813788-59813807 | MS.gene92436:intron | 55.0% | |
| GCAGCTAGTAGCGCAAACGA+AGG | - | chr8.4:59816306-59816325 | None:intergenic | 55.0% | |
| TCAGCTTCCCATGCCCTGTA+CGG | - | chr8.4:59813640-59813659 | None:intergenic | 55.0% | |
| TGCGGCAAATGGACGAGGTA+AGG | - | chr8.4:59814588-59814607 | None:intergenic | 55.0% | |
| TTACCCGCCAGAGTGAGGAA+AGG | - | chr8.4:59812481-59812500 | None:intergenic | 55.0% | |
| TTTGCCTCGCCATTCTGCCA+TGG | - | chr8.4:59815036-59815055 | None:intergenic | 55.0% | |
| ! | CTCTCGTTGGTTGGCTGGTA+CGG | + | chr8.4:59813581-59813600 | MS.gene92436:intron | 55.0% |
| ! | TGACTTGATGGGCCTCTCGT+TGG | + | chr8.4:59813568-59813587 | MS.gene92436:intron | 55.0% |
| ! | TTGATGGGCCTCTCGTTGGT+TGG | + | chr8.4:59813572-59813591 | MS.gene92436:intron | 55.0% |
| !! | ATGGCTTTGGGCTGCTGCAA+CGG | + | chr8.4:59814907-59814926 | MS.gene92436:CDS | 55.0% |
| !! | GCTGATTTGCACAGCCCAGT+TGG | + | chr8.4:59813785-59813804 | MS.gene92436:intron | 55.0% |
| !! | GCTTGACGTTTGGTGGACTG+TGG | - | chr8.4:59813857-59813876 | None:intergenic | 55.0% |
| AGCCCATGGAGACTCCATGG+TGG | - | chr8.4:59815098-59815117 | None:intergenic | 60.0% | |
| AGCTCGTCCGTACAGGGCAT+GGG | + | chr8.4:59813630-59813649 | MS.gene92436:intron | 60.0% | |
| AGGTTGCAGCTCGTCCGTAC+AGG | + | chr8.4:59813623-59813642 | MS.gene92436:intron | 60.0% | |
| CAACAGTGGAGCTGCCTAGG+AGG | + | chr8.4:59813370-59813389 | MS.gene92436:intron | 60.0% | |
| CGTACCAGCCAACCAACGAG+AGG | - | chr8.4:59813583-59813602 | None:intergenic | 60.0% | |
| GCACCTGGAGAGGACCTATC+TGG | + | chr8.4:59815662-59815681 | MS.gene92436:CDS | 60.0% | |
| GCCCACCATGGAGTCTCCAT+GGG | + | chr8.4:59815093-59815112 | MS.gene92436:intron | 60.0% | |
| GCCCATGGAGACTCCATGGT+GGG | - | chr8.4:59815097-59815116 | None:intergenic | 60.0% | |
| GGTTGCAGCTCGTCCGTACA+GGG | + | chr8.4:59813624-59813643 | MS.gene92436:intron | 60.0% | |
| GTGTCTCATGACCTGCCACG+CGG | - | chr8.4:59813746-59813765 | None:intergenic | 60.0% | |
| TAGCCGTCTCATGGAGGCTC+AGG | + | chr8.4:59816673-59816692 | MS.gene92436:CDS | 60.0% | |
| TGCAGCCCATGGAGACTCCA+TGG | - | chr8.4:59815101-59815120 | None:intergenic | 60.0% | |
| TGCCCACCATGGAGTCTCCA+TGG | + | chr8.4:59815092-59815111 | MS.gene92436:intron | 60.0% | |
| ! | TCCTCACTCTGGCGGGTAAC+TGG | + | chr8.4:59812482-59812501 | MS.gene92436:intron | 60.0% |
| !! | ATGGTGCCGCCATGGCAGAA+TGG | + | chr8.4:59815024-59815043 | MS.gene92436:intron | 60.0% |
| CAGCTCGTCCGTACAGGGCA+TGG | + | chr8.4:59813629-59813648 | MS.gene92436:intron | 65.0% | |
| GCCAGTTACCCGCCAGAGTG+AGG | - | chr8.4:59812486-59812505 | None:intergenic | 65.0% | |
| GCCTCGCCATTCTGCCATGG+CGG | - | chr8.4:59815033-59815052 | None:intergenic | 65.0% | |
| GCTTACGTCACTGTGCCGCG+TGG | + | chr8.4:59813728-59813747 | MS.gene92436:intron | 65.0% | |
| ! | TGGGCCTCTCGTTGGTTGGC+TGG | + | chr8.4:59813576-59813595 | MS.gene92436:intron | 65.0% |
| !! | TGGTGGTCATGGTGCCGCCA+TGG | + | chr8.4:59815016-59815035 | MS.gene92436:intron | 65.0% |
| ACGTCACTGTGCCGCGTGGC+AGG | + | chr8.4:59813732-59813751 | MS.gene92436:intron | 70.0% | |
| ATGGCAAGCGCGCCCCCAAC+TGG | - | chr8.4:59813803-59813822 | None:intergenic | 70.0% | |
| GCCGCCATGGCAGAATGGCG+AGG | + | chr8.4:59815029-59815048 | MS.gene92436:intron | 70.0% | |
| TGGCAAGCGCGCCCCCAACT+GGG | - | chr8.4:59813802-59813821 | None:intergenic | 70.0% | |
| ! | AGTTGGGGGCGCGCTTGCCA+TGG | + | chr8.4:59813802-59813821 | MS.gene92436:intron | 70.0% |
| ! | GGGGGCGCGCTTGCCATGGT+TGG | + | chr8.4:59813806-59813825 | MS.gene92436:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 59812342 | 59816761 | 59812342 | ID=MS.gene92436 |
| chr8.4 | mRNA | 59812342 | 59816761 | 59812342 | ID=MS.gene92436.t1;Parent=MS.gene92436 |
| chr8.4 | exon | 59812342 | 59812496 | 59812342 | ID=MS.gene92436.t1.exon1;Parent=MS.gene92436.t1 |
| chr8.4 | CDS | 59812342 | 59812496 | 59812342 | ID=cds.MS.gene92436.t1;Parent=MS.gene92436.t1 |
| chr8.4 | exon | 59812669 | 59812819 | 59812669 | ID=MS.gene92436.t1.exon2;Parent=MS.gene92436.t1 |
| chr8.4 | CDS | 59812669 | 59812819 | 59812669 | ID=cds.MS.gene92436.t1;Parent=MS.gene92436.t1 |
| chr8.4 | exon | 59814528 | 59814659 | 59814528 | ID=MS.gene92436.t1.exon3;Parent=MS.gene92436.t1 |
| chr8.4 | CDS | 59814528 | 59814659 | 59814528 | ID=cds.MS.gene92436.t1;Parent=MS.gene92436.t1 |
| chr8.4 | exon | 59814788 | 59814928 | 59814788 | ID=MS.gene92436.t1.exon4;Parent=MS.gene92436.t1 |
| chr8.4 | CDS | 59814788 | 59814928 | 59814788 | ID=cds.MS.gene92436.t1;Parent=MS.gene92436.t1 |
| chr8.4 | exon | 59815584 | 59815847 | 59815584 | ID=MS.gene92436.t1.exon5;Parent=MS.gene92436.t1 |
| chr8.4 | CDS | 59815584 | 59815847 | 59815584 | ID=cds.MS.gene92436.t1;Parent=MS.gene92436.t1 |
| chr8.4 | exon | 59816138 | 59816761 | 59816138 | ID=MS.gene92436.t1.exon6;Parent=MS.gene92436.t1 |
| chr8.4 | CDS | 59816138 | 59816761 | 59816138 | ID=cds.MS.gene92436.t1;Parent=MS.gene92436.t1 |
| Gene Sequence |
| Protein sequence |
