AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene92586

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92586.t1 MTR_4g019370 96.809 94 3 0 1 94 1 94 3.00e-61 190
MS.gene92586.t1 MTR_3g101290 71.186 59 17 0 36 94 35 93 8.88e-26 95.9
MS.gene92586.t1 MTR_4g094982 64.407 59 21 0 36 94 3 61 3.04e-23 90.5
MS.gene92586.t1 MTR_6g015455 62.712 59 22 0 36 94 3 61 7.96e-23 91.7
MS.gene92586.t1 MTR_5g016510 62.712 59 22 0 36 94 3 61 3.11e-22 88.6
MS.gene92586.t1 MTR_5g082910 59.701 67 27 0 28 94 9 75 2.73e-21 85.5
MS.gene92586.t1 MTR_6g027370 54.688 64 29 0 31 94 92 155 9.55e-20 82.0
MS.gene92586.t1 MTR_3g089045 59.649 57 23 0 38 94 16 72 2.12e-18 77.8
MS.gene92586.t1 MTR_6g027340 47.826 69 36 0 26 94 4 72 2.84e-18 76.3
MS.gene92586.t1 MTR_5g041570 51.471 68 33 0 27 94 123 190 3.23e-18 78.2
MS.gene92586.t1 MTR_6g074860 56.140 57 25 0 38 94 4 60 2.87e-17 73.9
MS.gene92586.t1 MTR_7g086960 56.140 57 25 0 38 94 89 145 4.14e-17 75.1
MS.gene92586.t1 MTR_4g082040 51.562 64 31 0 31 94 98 161 1.84e-16 73.6
MS.gene92586.t1 MTR_6g027360 46.377 69 37 0 26 94 66 134 3.00e-16 72.4
MS.gene92586.t1 MTR_5g042030 55.172 58 25 1 38 94 9 66 2.15e-15 69.7
MS.gene92586.t1 MTR_4g029540 48.571 70 31 2 30 98 4 69 5.54e-14 65.9
MS.gene92586.t1 MTR_1g026870 46.552 58 31 0 37 94 84 141 8.14e-14 65.9
MS.gene92586.t1 MTR_5g062790 49.231 65 32 1 31 94 4 68 9.05e-14 65.5
MS.gene92586.t1 MTR_4g105660 50.000 58 29 0 37 94 179 236 1.11e-13 65.5
MS.gene92586.t1 MTR_3g463400 37.255 102 52 2 1 94 92 189 1.22e-13 65.5
MS.gene92586.t1 MTR_7g061330 48.276 58 30 0 37 94 112 169 1.46e-13 65.1
MS.gene92586.t1 MTR_7g461410 48.276 58 30 0 37 94 112 169 1.46e-13 65.1
MS.gene92586.t1 MTR_7g061330 48.276 58 30 0 37 94 76 133 1.51e-13 65.1
MS.gene92586.t1 MTR_5g088640 51.724 58 27 1 38 94 14 71 1.58e-13 64.3
MS.gene92586.t1 MTR_3g110028 46.552 58 31 0 37 94 84 141 1.68e-13 65.1
MS.gene92586.t1 MTR_5g088080 51.724 58 27 1 38 94 14 71 1.75e-13 64.3
MS.gene92586.t1 MTR_5g088150 51.724 58 27 1 38 94 14 71 1.75e-13 64.3
MS.gene92586.t1 MTR_5g488210 51.724 58 27 1 38 94 14 71 1.75e-13 64.3
MS.gene92586.t1 MTR_8g006470 52.830 53 24 1 38 89 12 64 2.50e-13 63.9
MS.gene92586.t1 MTR_5g488170 51.724 58 27 1 38 94 14 71 2.54e-13 63.5
MS.gene92586.t1 MTR_7g451170 46.667 60 32 0 35 94 188 247 2.76e-13 64.3
MS.gene92586.t1 MTR_4g063100 54.237 59 24 2 38 94 9 66 3.23e-13 63.5
MS.gene92586.t1 MTR_3g461490 50.000 58 28 1 38 94 14 71 7.95e-13 62.8
MS.gene92586.t1 MTR_5g049190 50.000 54 27 0 37 90 18 71 1.28e-12 61.6
MS.gene92586.t1 MTR_5g070020 44.828 58 32 0 37 94 121 178 1.37e-12 62.4
MS.gene92586.t1 MTR_7g037260 48.276 58 30 0 37 94 144 201 1.46e-12 62.4
MS.gene92586.t1 MTR_2g088170 46.552 58 30 1 38 94 31 88 1.72e-12 62.0
MS.gene92586.t1 MTR_7g037130 48.276 58 30 0 37 94 144 201 3.61e-12 61.2
MS.gene92586.t1 MTR_3g077650 48.148 54 28 0 37 90 180 233 3.62e-12 61.2
MS.gene92586.t1 MTR_4g478180 50.000 64 28 3 33 94 11 72 3.80e-12 61.2
MS.gene92586.t1 MTR_2g067420 50.000 58 28 1 38 94 16 73 4.09e-12 60.8
MS.gene92586.t1 MTR_4g088015 46.552 58 31 0 37 94 220 277 4.11e-12 61.2
MS.gene92586.t1 MTR_1g043080 47.458 59 30 1 38 95 14 72 5.18e-12 60.1
MS.gene92586.t1 MTR_2g095520 50.847 59 27 2 38 94 14 72 5.70e-12 60.5
MS.gene92586.t1 MTR_7g096930 48.276 58 29 1 38 94 14 71 5.86e-12 60.1
MS.gene92586.t1 MTR_3g011610 50.000 60 27 2 38 95 39 97 6.37e-12 60.5
MS.gene92586.t1 MTR_2g096380 50.847 59 26 2 38 94 8 65 6.70e-12 59.7
MS.gene92586.t1 MTR_0140s0030 50.000 58 28 1 38 94 15 72 8.04e-12 60.1
MS.gene92586.t1 MTR_0489s0020 50.000 58 28 1 38 94 15 72 8.04e-12 60.1
MS.gene92586.t1 MTR_3g028740 47.222 72 36 2 25 94 10 81 8.44e-12 60.1
MS.gene92586.t1 MTR_5g010650 46.552 58 31 0 37 94 109 166 8.95e-12 60.1
MS.gene92586.t1 MTR_7g087130 52.542 59 25 2 38 94 14 71 9.04e-12 60.1
MS.gene92586.t1 MTR_1g086530 50.847 59 26 2 38 94 35 92 1.17e-11 59.3
MS.gene92586.t1 MTR_7g010210 52.542 59 25 2 38 94 14 71 1.23e-11 59.7
MS.gene92586.t1 MTR_7g010210 52.542 59 25 2 38 94 14 71 1.41e-11 59.3
MS.gene92586.t1 MTR_4g091490 43.939 66 35 2 30 94 8 72 1.43e-11 59.3
MS.gene92586.t1 MTR_6g012180 48.276 58 29 1 38 94 14 71 1.60e-11 59.3
MS.gene92586.t1 MTR_3g052450 46.552 58 30 1 38 94 42 99 1.79e-11 59.3
MS.gene92586.t1 MTR_1g062940 48.387 62 31 1 34 94 4 65 1.88e-11 58.2
MS.gene92586.t1 MTR_1g110460 43.103 58 32 1 38 94 28 85 2.03e-11 58.9
MS.gene92586.t1 MTR_1g086510 44.286 70 37 2 26 94 12 80 2.03e-11 58.5
MS.gene92586.t1 MTR_5g088610 45.312 64 34 1 32 94 5 68 2.06e-11 58.9
MS.gene92586.t1 MTR_4g082230 50.000 58 28 1 38 94 14 71 2.12e-11 58.9
MS.gene92586.t1 MTR_7g115650 48.276 58 29 1 38 94 14 71 2.18e-11 58.2
MS.gene92586.t1 MTR_4g128670 50.847 59 27 2 38 94 14 72 3.41e-11 58.5
MS.gene92586.t1 MTR_6g012690 48.276 58 29 1 38 94 14 71 3.51e-11 58.5
MS.gene92586.t1 MTR_1g076150 48.333 60 28 2 38 95 14 72 3.52e-11 57.8
MS.gene92586.t1 MTR_3g074520 47.458 59 28 2 38 94 14 71 3.53e-11 58.2
MS.gene92586.t1 MTR_2g011660 43.939 66 35 2 30 94 8 72 3.66e-11 58.2
MS.gene92586.t1 MTR_3g077110 49.153 59 27 2 38 94 14 71 4.15e-11 58.2
MS.gene92586.t1 MTR_5g029840 50.000 58 28 1 38 94 14 71 4.46e-11 58.2
MS.gene92586.t1 MTR_4g057635 47.458 59 29 2 38 94 14 72 4.87e-11 57.8
MS.gene92586.t1 MTR_4g105130 48.276 58 29 1 38 94 14 71 5.59e-11 57.8
MS.gene92586.t1 MTR_2g089620 46.032 63 32 2 33 94 10 71 6.51e-11 57.4
MS.gene92586.t1 MTR_1g057980 42.105 57 33 0 38 94 80 136 6.57e-11 57.4
MS.gene92586.t1 MTR_4g082290 48.276 58 29 1 38 94 14 71 7.75e-11 57.4
MS.gene92586.t1 MTR_2g064160 44.286 70 37 2 28 95 2 71 7.85e-11 57.4
MS.gene92586.t1 MTR_0023s0210 40.299 67 36 3 30 94 2 66 8.04e-11 53.9
MS.gene92586.t1 MTR_5g014990 50.847 59 27 2 38 94 14 72 8.40e-11 57.0
MS.gene92586.t1 MTR_7g102110 45.161 62 32 2 38 97 14 75 9.74e-11 57.0
MS.gene92586.t1 MTR_2g097910 50.000 58 28 1 38 94 22 79 9.80e-11 57.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92586.t1 AT3G55730 52.679 112 35 2 1 94 1 112 1.14e-28 106
MS.gene92586.t1 AT2G39880 57.143 84 36 0 11 94 23 106 1.79e-26 100
MS.gene92586.t1 AT3G09230 69.492 59 18 0 36 94 53 111 3.32e-23 92.0
MS.gene92586.t1 AT5G67300 61.667 60 23 0 36 95 4 63 4.62e-23 90.5
MS.gene92586.t1 AT4G37260 64.407 59 21 0 36 94 11 69 1.48e-22 89.4
MS.gene92586.t1 AT2G23290 63.333 60 22 0 36 95 11 70 9.58e-22 87.0
MS.gene92586.t1 AT3G50060 62.712 59 22 0 36 94 4 62 1.34e-21 86.7
MS.gene92586.t1 AT1G69560 53.030 66 31 0 29 94 114 179 3.85e-19 80.5
MS.gene92586.t1 AT1G69560 53.030 66 31 0 29 94 98 163 4.19e-19 80.1
MS.gene92586.t1 AT1G17950 61.404 57 22 0 38 94 5 61 8.61e-19 78.2
MS.gene92586.t1 AT4G33450 57.895 57 24 0 38 94 19 75 8.74e-19 78.2
MS.gene92586.t1 AT5G17800 41.837 98 52 2 2 94 52 149 2.56e-18 78.2
MS.gene92586.t1 AT1G26780 57.895 57 24 0 38 94 98 154 5.46e-18 77.4
MS.gene92586.t1 AT1G26780 57.895 57 24 0 38 94 98 154 2.11e-17 75.1
MS.gene92586.t1 AT1G73410 57.895 57 24 0 38 94 6 62 2.85e-17 74.3
MS.gene92586.t1 AT1G73410 57.895 57 24 0 38 94 6 62 3.48e-17 73.2
MS.gene92586.t1 AT3G29020 49.123 57 29 0 38 94 67 123 4.18e-14 66.2
MS.gene92586.t1 AT3G29020 49.123 57 29 0 38 94 65 121 4.95e-14 65.5
MS.gene92586.t1 AT5G11510 44.828 58 32 0 37 94 80 137 7.72e-14 66.2
MS.gene92586.t1 AT5G11510 44.828 58 32 0 37 94 80 137 7.72e-14 66.2
MS.gene92586.t1 AT5G11510 44.828 58 32 0 37 94 80 137 7.72e-14 66.2
MS.gene92586.t1 AT5G11510 44.828 58 32 0 37 94 80 137 9.08e-14 65.9
MS.gene92586.t1 AT5G11510 44.828 58 32 0 37 94 80 137 9.93e-14 65.9
MS.gene92586.t1 AT3G27785 45.902 61 33 0 34 94 185 245 2.62e-13 64.7
MS.gene92586.t1 AT4G18770 43.077 65 37 0 30 94 209 273 4.08e-13 63.9
MS.gene92586.t1 AT3G60460 52.830 53 24 1 38 89 13 65 5.60e-13 63.2
MS.gene92586.t1 AT5G58850 47.458 59 31 0 32 90 99 157 6.15e-13 63.5
MS.gene92586.t1 AT5G14750 50.000 68 32 2 28 94 9 75 6.16e-13 62.0
MS.gene92586.t1 AT2G47190 55.172 58 25 1 38 94 22 79 9.45e-13 62.4
MS.gene92586.t1 AT5G62470 49.123 57 29 0 38 94 14 70 1.02e-12 62.8
MS.gene92586.t1 AT1G79180 53.968 63 27 2 35 95 12 74 1.15e-12 62.4
MS.gene92586.t1 AT5G56110 48.276 58 29 1 38 94 14 71 1.33e-12 62.4
MS.gene92586.t1 AT5G40360 43.860 57 32 0 38 94 158 214 1.54e-12 62.4
MS.gene92586.t1 AT2G31180 48.276 58 29 1 38 94 14 71 1.88e-12 61.2
MS.gene92586.t1 AT5G59780 49.153 59 27 2 38 94 10 67 2.00e-12 61.2
MS.gene92586.t1 AT3G09370 41.270 63 37 0 37 99 134 196 2.03e-12 62.0
MS.gene92586.t1 AT3G09370 41.270 63 37 0 37 99 129 191 2.19e-12 62.0
MS.gene92586.t1 AT3G46130 50.847 59 26 2 38 94 11 68 2.31e-12 61.2
MS.gene92586.t1 AT1G25340 42.647 68 38 1 28 94 10 77 2.38e-12 61.2
MS.gene92586.t1 AT5G02320 44.828 58 32 0 37 94 66 123 2.55e-12 61.6
MS.gene92586.t1 AT3G09370 41.270 63 37 0 37 99 142 204 2.59e-12 61.6
MS.gene92586.t1 AT5G55020 47.458 59 30 1 38 95 28 86 2.81e-12 61.6
MS.gene92586.t1 AT5G02320 44.828 58 32 0 37 94 126 183 3.02e-12 61.6
MS.gene92586.t1 AT5G02320 44.828 58 32 0 37 94 126 183 3.02e-12 61.6
MS.gene92586.t1 AT2G32460 44.444 81 39 3 15 94 2 77 3.70e-12 61.2
MS.gene92586.t1 AT3G23250 50.000 58 28 1 38 94 14 71 4.10e-12 60.8
MS.gene92586.t1 AT5G62470 51.724 58 27 1 38 94 14 71 4.38e-12 60.8
MS.gene92586.t1 AT4G32730 44.828 58 32 0 37 94 86 143 4.41e-12 61.2
MS.gene92586.t1 AT4G32730 44.828 58 32 0 37 94 86 143 4.65e-12 61.2
MS.gene92586.t1 AT4G32730 44.828 58 32 0 37 94 86 143 4.65e-12 61.2
MS.gene92586.t1 AT4G32730 44.828 58 32 0 37 94 86 143 4.65e-12 61.2
MS.gene92586.t1 AT4G32730 44.828 58 32 0 37 94 86 143 4.65e-12 61.2
MS.gene92586.t1 AT3G47600 51.724 58 27 1 38 94 14 71 4.69e-12 60.8
MS.gene92586.t1 AT1G74650 53.448 58 26 1 38 94 14 71 5.90e-12 60.5
MS.gene92586.t1 AT1G25340 43.284 67 34 1 28 94 10 72 6.14e-12 60.1
MS.gene92586.t1 AT1G25340 43.284 67 34 1 28 94 10 72 6.33e-12 60.5
MS.gene92586.t1 AT5G39700 35.802 81 51 1 15 94 32 112 6.34e-12 59.3
MS.gene92586.t1 AT3G30210 50.847 59 26 2 38 94 29 86 1.06e-11 59.7
MS.gene92586.t1 AT3G53200 49.153 59 27 2 38 94 11 68 1.07e-11 59.3
MS.gene92586.t1 AT1G66380 43.939 66 36 1 30 94 2 67 1.15e-11 57.0
MS.gene92586.t1 AT2G32460 48.276 58 29 1 38 94 8 65 1.15e-11 59.7
MS.gene92586.t1 AT3G61250 48.333 60 28 2 38 95 14 72 1.56e-11 59.3
MS.gene92586.t1 AT1G56160 51.613 62 28 2 35 94 12 73 2.20e-11 58.9
MS.gene92586.t1 AT3G01140 50.000 58 28 1 38 94 14 71 2.33e-11 58.9
MS.gene92586.t1 AT1G06180 52.542 59 25 2 38 94 14 71 2.35e-11 58.5
MS.gene92586.t1 AT4G05100 46.552 58 30 1 38 94 15 72 2.74e-11 58.5
MS.gene92586.t1 AT1G08810 48.276 58 29 1 38 94 14 71 3.00e-11 58.2
MS.gene92586.t1 AT4G37780 52.542 59 26 2 38 94 14 72 3.53e-11 58.2
MS.gene92586.t1 AT3G01140 50.000 58 28 1 38 94 57 114 3.54e-11 58.5
MS.gene92586.t1 AT5G40330 45.455 66 35 1 30 94 6 71 3.63e-11 57.8
MS.gene92586.t1 AT4G26930 42.029 69 39 1 27 94 10 78 3.72e-11 58.5
MS.gene92586.t1 AT3G28910 48.276 58 29 1 38 94 14 71 3.75e-11 58.2
MS.gene92586.t1 AT4G21440 44.828 58 31 1 38 94 14 71 4.26e-11 58.2
MS.gene92586.t1 AT5G06100 40.000 85 46 2 15 94 7 91 4.34e-11 58.2
MS.gene92586.t1 AT4G01680 48.276 58 29 1 38 94 14 71 4.42e-11 58.2
MS.gene92586.t1 AT2G36890 49.153 59 28 2 38 94 55 113 4.49e-11 58.2
MS.gene92586.t1 AT5G23000 49.206 63 29 3 35 94 10 72 4.63e-11 58.2
MS.gene92586.t1 AT5G06100 48.276 58 29 1 38 94 34 91 4.67e-11 58.2
MS.gene92586.t1 AT5G06100 48.276 58 29 1 38 94 34 91 4.67e-11 58.2
MS.gene92586.t1 AT5G06100 48.276 58 29 1 38 94 34 91 4.67e-11 58.2
MS.gene92586.t1 AT5G06100 48.276 58 29 1 38 94 34 91 4.67e-11 58.2
MS.gene92586.t1 AT4G01680 48.276 58 29 1 38 94 14 71 4.75e-11 57.4
MS.gene92586.t1 AT5G40350 46.552 58 30 1 38 94 19 76 4.84e-11 57.0
MS.gene92586.t1 AT5G52600 52.381 63 26 3 30 90 7 67 5.04e-11 57.0
MS.gene92586.t1 AT5G11050 41.379 58 34 0 37 94 104 161 5.32e-11 57.8
MS.gene92586.t1 AT3G49690 49.153 59 28 2 38 94 14 72 5.60e-11 57.8
MS.gene92586.t1 AT1G66380 41.429 70 40 1 30 98 2 71 5.88e-11 55.8
MS.gene92586.t1 AT3G11440 46.552 58 30 1 38 94 43 100 6.68e-11 57.8
MS.gene92586.t1 AT3G11440 46.552 58 30 1 38 94 43 100 6.68e-11 57.8
MS.gene92586.t1 AT3G11440 46.552 58 30 1 38 94 43 100 6.68e-11 57.8
MS.gene92586.t1 AT3G27810 46.552 58 30 1 38 94 22 79 6.83e-11 57.0
MS.gene92586.t1 AT3G11440 46.552 58 30 1 38 94 43 100 6.95e-11 57.8
MS.gene92586.t1 AT3G01530 45.161 62 33 1 34 94 23 84 7.67e-11 56.6
MS.gene92586.t1 AT5G15310 49.123 57 28 1 38 93 14 70 8.81e-11 57.4
MS.gene92586.t1 AT5G15310 49.123 57 28 1 38 93 14 70 9.48e-11 57.0

Find 32 sgRNAs with CRISPR-Local

Find 33 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGAGAATGGCGTCTTCTTC+AGG 0.289480 4.2:+82915908 None:intergenic
AGAGTTGGTGGTTGTTGTTC+AGG 0.326346 4.2:+82916028 None:intergenic
GTCAGTTCGGTGCTAGAAAC+TGG 0.340339 4.2:-82915874 MS.gene92586:CDS
GGAAGTCGTGCCGGCTCCGA+TGG 0.433047 4.2:-82915817 MS.gene92586:CDS
CGTGGAATTTCTAGAAGATC+GGG 0.450998 4.2:-82915839 MS.gene92586:CDS
GACGAAGGTTTAGCCGCATT+AGG 0.458049 4.2:-82915980 MS.gene92586:CDS
AGTCGTCTTGTTAGTCAGTT+CGG 0.460173 4.2:-82915887 MS.gene92586:CDS
GTTAAACGAAAACCCTTCAC+TGG 0.484887 4.2:-82915773 MS.gene92586:CDS
TCGTGGAATTTCTAGAAGAT+CGG 0.492218 4.2:-82915840 MS.gene92586:CDS
AACAAGTTTCGTACCAGTGA+AGG 0.498645 4.2:+82915760 None:intergenic
ACGGCGGTGCACGACGGAAG+CGG 0.506031 4.2:-82916004 MS.gene92586:CDS
TCGTGCACCGCCGTGAGAGT+TGG 0.511514 4.2:+82916013 None:intergenic
ACTAACAAGACGACTGAGAA+TGG 0.521928 4.2:+82915895 None:intergenic
AACTGGAGTTTGATTGCTCG+TGG 0.529814 4.2:-82915857 MS.gene92586:CDS
TGCACCGCCGTGAGAGTTGG+TGG 0.533257 4.2:+82916016 None:intergenic
GAAGATCGGGGAAGTCGTGC+CGG 0.536473 4.2:-82915826 MS.gene92586:CDS
GCATTAGGCGAAGGCGGCGA+AGG 0.538199 4.2:-82915965 MS.gene92586:CDS
GCTGATTACACCATCGGAGC+CGG 0.561787 4.2:+82915807 None:intergenic
GGTTTAGCCGCATTAGGCGA+AGG 0.563573 4.2:-82915974 MS.gene92586:CDS
CACGACGGAAGCGGCGACGA+AGG 0.569922 4.2:-82915995 MS.gene92586:CDS
ACAAGTTTCGTACCAGTGAA+GGG 0.577594 4.2:+82915761 None:intergenic
GATCAAGCTGATTACACCAT+CGG 0.607608 4.2:+82915801 None:intergenic
AGTAGCGGTAGCAAAGTGAA+AGG 0.608608 4.2:-82915941 MS.gene92586:CDS
TTCGCCGCCTTCGCCTAATG+CGG 0.619488 4.2:+82915967 None:intergenic
GTAGCAAAGTGAAAGGACCT+TGG 0.631627 4.2:-82915934 MS.gene92586:CDS
GAAGGCGGCGAAGGAAGTAG+CGG 0.640817 4.2:-82915956 MS.gene92586:CDS
ACTCTCACGGCGGTGCACGA+CGG 0.656704 4.2:-82916010 MS.gene92586:CDS
ACAACAACCACCAACTCTCA+CGG 0.661075 4.2:-82916023 MS.gene92586:CDS
TTAGCCGCATTAGGCGAAGG+CGG 0.661776 4.2:-82915971 MS.gene92586:CDS
GCGTCTTCTTCAGGAGACCA+AGG 0.675143 4.2:+82915917 None:intergenic
GTGGAATTTCTAGAAGATCG+GGG 0.717927 4.2:-82915838 MS.gene92586:CDS
ACAACCACCAACTCTCACGG+CGG 0.782687 4.2:-82916020 MS.gene92586:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AAGGGTTTTCGTTTAACAGA+AGG + chr4.2:82916003-82916022 None:intergenic 35.0%
! TCGTGGAATTTCTAGAAGAT+CGG - chr4.2:82915939-82915958 MS.gene92586:CDS 35.0%
AACAAGTTTCGTACCAGTGA+AGG + chr4.2:82916022-82916041 None:intergenic 40.0%
ACAAGTTTCGTACCAGTGAA+GGG + chr4.2:82916021-82916040 None:intergenic 40.0%
ACTAACAAGACGACTGAGAA+TGG + chr4.2:82915887-82915906 None:intergenic 40.0%
GATCAAGCTGATTACACCAT+CGG + chr4.2:82915981-82916000 None:intergenic 40.0%
GTTAAACGAAAACCCTTCAC+TGG - chr4.2:82916006-82916025 MS.gene92586:CDS 40.0%
! AGTCGTCTTGTTAGTCAGTT+CGG - chr4.2:82915892-82915911 MS.gene92586:CDS 40.0%
! CGTGGAATTTCTAGAAGATC+GGG - chr4.2:82915940-82915959 MS.gene92586:CDS 40.0%
! GTGGAATTTCTAGAAGATCG+GGG - chr4.2:82915941-82915960 MS.gene92586:CDS 40.0%
AACTGGAGTTTGATTGCTCG+TGG - chr4.2:82915922-82915941 MS.gene92586:CDS 45.0%
ACAACAACCACCAACTCTCA+CGG - chr4.2:82915756-82915775 MS.gene92586:CDS 45.0%
AGTAGCGGTAGCAAAGTGAA+AGG - chr4.2:82915838-82915857 MS.gene92586:CDS 45.0%
GTAGCAAAGTGAAAGGACCT+TGG - chr4.2:82915845-82915864 MS.gene92586:CDS 45.0%
!! AGAGTTGGTGGTTGTTGTTC+AGG + chr4.2:82915754-82915773 None:intergenic 45.0%
CTGAGAATGGCGTCTTCTTC+AGG + chr4.2:82915874-82915893 None:intergenic 50.0%
GACGAAGGTTTAGCCGCATT+AGG - chr4.2:82915799-82915818 MS.gene92586:CDS 50.0%
!! GTCAGTTCGGTGCTAGAAAC+TGG - chr4.2:82915905-82915924 MS.gene92586:CDS 50.0%
ACAACCACCAACTCTCACGG+CGG - chr4.2:82915759-82915778 MS.gene92586:CDS 55.0%
GCGTCTTCTTCAGGAGACCA+AGG + chr4.2:82915865-82915884 None:intergenic 55.0%
GCTGATTACACCATCGGAGC+CGG + chr4.2:82915975-82915994 None:intergenic 55.0%
GGTTTAGCCGCATTAGGCGA+AGG - chr4.2:82915805-82915824 MS.gene92586:CDS 55.0%
TTAGCCGCATTAGGCGAAGG+CGG - chr4.2:82915808-82915827 MS.gene92586:CDS 55.0%
GAAGATCGGGGAAGTCGTGC+CGG - chr4.2:82915953-82915972 MS.gene92586:CDS 60.0%
GAAGGCGGCGAAGGAAGTAG+CGG - chr4.2:82915823-82915842 MS.gene92586:CDS 60.0%
TTCGCCGCCTTCGCCTAATG+CGG + chr4.2:82915815-82915834 None:intergenic 60.0%
ACTCTCACGGCGGTGCACGA+CGG - chr4.2:82915769-82915788 MS.gene92586:CDS 65.0%
GCATTAGGCGAAGGCGGCGA+AGG - chr4.2:82915814-82915833 MS.gene92586:CDS 65.0%
TCGTGCACCGCCGTGAGAGT+TGG + chr4.2:82915769-82915788 None:intergenic 65.0%
TGCACCGCCGTGAGAGTTGG+TGG + chr4.2:82915766-82915785 None:intergenic 65.0%
ACGGCGGTGCACGACGGAAG+CGG - chr4.2:82915775-82915794 MS.gene92586:CDS 70.0%
CACGACGGAAGCGGCGACGA+AGG - chr4.2:82915784-82915803 MS.gene92586:CDS 70.0%
!! GGAAGTCGTGCCGGCTCCGA+TGG - chr4.2:82915962-82915981 MS.gene92586:CDS 70.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 82915745 82916056 82915745 ID=MS.gene92586
chr4.2 mRNA 82915745 82916056 82915745 ID=MS.gene92586.t1;Parent=MS.gene92586
chr4.2 exon 82915745 82916056 82915745 ID=MS.gene92586.t1.exon1;Parent=MS.gene92586.t1
chr4.2 CDS 82915745 82916056 82915745 ID=cds.MS.gene92586.t1;Parent=MS.gene92586.t1
Gene Sequence

>MS.gene92586

ATGGAACCTGAACAACAACCACCAACTCTCACGGCGGTGCACGACGGAAGCGGCGACGAAGGTTTAGCCGCATTAGGCGAAGGCGGCGAAGGAAGTAGCGGTAGCAAAGTGAAAGGACCTTGGTCTCCTGAAGAAGACGCCATTCTCAGTCGTCTTGTTAGTCAGTTCGGTGCTAGAAACTGGAGTTTGATTGCTCGTGGAATTTCTAGAAGATCGGGGAAGTCGTGCCGGCTCCGATGGTGTAATCAGCTTGATCCTTCTGTTAAACGAAAACCCTTCACTGGTACGAAACTTGTTAATGATCGCTTCTAA
Protein sequence

>MS.gene92586.t1

MEPEQQPPTLTAVHDGSGDEGLAALGEGGEGSSGSKVKGPWSPEEDAILSRLVSQFGARNWSLIARGISRRSGKSCRLRWCNQLDPSVKRKPFTGTKLVNDRF