Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene92631.t1 | RHN74120.1 | 98.2 | 502 | 8 | 1 | 1 | 502 | 1 | 501 | 9.00E-272 | 945.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene92631.t1 | Q8S4W7 | 45.8 | 570 | 220 | 10 | 8 | 497 | 26 | 586 | 1.2e-126 | 454.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene92631.t1 | A0A396J7P5 | 98.2 | 502 | 8 | 1 | 1 | 502 | 1 | 501 | 6.5e-272 | 945.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene92631.t1 | TF | GRAS |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene92631.t1 | MTR_3g065980 | 46.753 | 539 | 210 | 13 | 16 | 488 | 13 | 540 | 6.51e-157 | 457 |
MS.gene92631.t1 | MTR_7g027190 | 42.105 | 399 | 190 | 9 | 116 | 488 | 290 | 673 | 5.07e-92 | 294 |
MS.gene92631.t1 | MTR_4g133660 | 33.410 | 437 | 268 | 10 | 67 | 487 | 113 | 542 | 2.32e-69 | 231 |
MS.gene92631.t1 | MTR_2g082090 | 36.990 | 392 | 220 | 10 | 115 | 487 | 195 | 578 | 1.72e-67 | 227 |
MS.gene92631.t1 | MTR_5g094450 | 36.272 | 397 | 216 | 13 | 115 | 488 | 150 | 532 | 4.26e-66 | 223 |
MS.gene92631.t1 | MTR_3g056110 | 38.287 | 397 | 204 | 14 | 115 | 488 | 164 | 542 | 1.30e-65 | 221 |
MS.gene92631.t1 | MTR_8g442410 | 35.411 | 401 | 215 | 13 | 118 | 492 | 147 | 529 | 1.91e-65 | 221 |
MS.gene92631.t1 | MTR_4g102790 | 34.783 | 414 | 240 | 9 | 96 | 490 | 262 | 664 | 3.89e-65 | 223 |
MS.gene92631.t1 | MTR_5g097480 | 36.340 | 388 | 216 | 12 | 119 | 488 | 170 | 544 | 1.77e-64 | 218 |
MS.gene92631.t1 | MTR_1g029420 | 37.067 | 375 | 219 | 10 | 125 | 488 | 224 | 592 | 4.10e-64 | 219 |
MS.gene92631.t1 | MTR_7g074650 | 37.366 | 372 | 199 | 11 | 130 | 488 | 442 | 792 | 9.11e-63 | 219 |
MS.gene92631.t1 | MTR_3g089055 | 32.558 | 473 | 275 | 16 | 38 | 488 | 120 | 570 | 1.13e-61 | 211 |
MS.gene92631.t1 | MTR_3g089055 | 32.558 | 473 | 275 | 16 | 38 | 488 | 115 | 565 | 1.26e-61 | 211 |
MS.gene92631.t1 | MTR_4g104020 | 34.321 | 405 | 217 | 14 | 116 | 489 | 135 | 521 | 1.53e-59 | 205 |
MS.gene92631.t1 | MTR_2g026250 | 30.165 | 484 | 304 | 16 | 25 | 489 | 129 | 597 | 2.40e-57 | 201 |
MS.gene92631.t1 | MTR_3g022830 | 30.952 | 420 | 223 | 9 | 127 | 488 | 26 | 436 | 4.23e-56 | 193 |
MS.gene92631.t1 | MTR_1g096030 | 31.059 | 425 | 239 | 16 | 101 | 490 | 56 | 461 | 3.70e-54 | 189 |
MS.gene92631.t1 | MTR_2g097410 | 32.199 | 382 | 239 | 8 | 120 | 487 | 365 | 740 | 3.59e-52 | 189 |
MS.gene92631.t1 | MTR_4g064160 | 33.245 | 379 | 235 | 8 | 121 | 487 | 311 | 683 | 6.82e-51 | 184 |
MS.gene92631.t1 | MTR_4g076020 | 33.947 | 380 | 202 | 13 | 130 | 493 | 88 | 434 | 9.91e-51 | 179 |
MS.gene92631.t1 | MTR_4g064180 | 29.504 | 383 | 252 | 5 | 117 | 485 | 245 | 623 | 1.38e-49 | 180 |
MS.gene92631.t1 | MTR_1g069725 | 29.773 | 440 | 267 | 12 | 66 | 487 | 47 | 462 | 5.38e-49 | 175 |
MS.gene92631.t1 | MTR_4g076140 | 29.705 | 441 | 233 | 14 | 117 | 489 | 39 | 470 | 1.51e-48 | 174 |
MS.gene92631.t1 | MTR_3g072710 | 33.333 | 399 | 230 | 12 | 116 | 487 | 110 | 499 | 2.15e-48 | 174 |
MS.gene92631.t1 | MTR_4g064150 | 30.412 | 388 | 248 | 7 | 116 | 487 | 351 | 732 | 2.74e-48 | 177 |
MS.gene92631.t1 | MTR_2g097310 | 32.199 | 382 | 239 | 8 | 118 | 487 | 264 | 637 | 3.87e-48 | 176 |
MS.gene92631.t1 | MTR_4g064120 | 29.504 | 383 | 252 | 6 | 117 | 485 | 245 | 623 | 4.78e-48 | 176 |
MS.gene92631.t1 | MTR_5g009080 | 29.148 | 446 | 230 | 12 | 117 | 489 | 47 | 479 | 1.90e-46 | 169 |
MS.gene92631.t1 | MTR_7g062120 | 30.890 | 382 | 242 | 8 | 121 | 488 | 367 | 740 | 6.42e-46 | 171 |
MS.gene92631.t1 | MTR_2g097467 | 31.061 | 396 | 252 | 12 | 102 | 487 | 269 | 653 | 3.00e-45 | 168 |
MS.gene92631.t1 | MTR_4g077760 | 31.130 | 469 | 266 | 18 | 58 | 488 | 106 | 555 | 3.12e-45 | 167 |
MS.gene92631.t1 | MTR_5g058860 | 32.108 | 408 | 243 | 13 | 108 | 490 | 101 | 499 | 3.70e-45 | 166 |
MS.gene92631.t1 | MTR_2g034250 | 29.545 | 396 | 250 | 8 | 116 | 490 | 200 | 587 | 4.14e-45 | 167 |
MS.gene92631.t1 | MTR_2g097350 | 31.070 | 383 | 242 | 10 | 118 | 487 | 266 | 639 | 1.01e-44 | 167 |
MS.gene92631.t1 | MTR_2g097390 | 30.085 | 472 | 291 | 15 | 33 | 487 | 191 | 640 | 1.53e-44 | 166 |
MS.gene92631.t1 | MTR_4g064200 | 31.854 | 383 | 237 | 12 | 119 | 487 | 277 | 649 | 2.25e-44 | 166 |
MS.gene92631.t1 | MTR_2g097380 | 33.433 | 335 | 190 | 9 | 158 | 487 | 254 | 560 | 5.10e-44 | 163 |
MS.gene92631.t1 | MTR_2g034260 | 28.101 | 395 | 256 | 8 | 116 | 490 | 200 | 586 | 9.86e-44 | 163 |
MS.gene92631.t1 | MTR_2g097473 | 29.899 | 398 | 254 | 11 | 102 | 487 | 269 | 653 | 8.05e-43 | 161 |
MS.gene92631.t1 | MTR_2g097463 | 30.179 | 391 | 252 | 11 | 109 | 487 | 273 | 654 | 1.49e-42 | 160 |
MS.gene92631.t1 | MTR_2g034280 | 27.157 | 394 | 259 | 9 | 116 | 490 | 193 | 577 | 3.06e-40 | 153 |
MS.gene92631.t1 | MTR_8g093070 | 30.829 | 386 | 220 | 15 | 123 | 487 | 136 | 495 | 3.14e-39 | 149 |
MS.gene92631.t1 | MTR_0092s0100 | 31.579 | 380 | 226 | 9 | 123 | 488 | 369 | 728 | 3.29e-39 | 152 |
MS.gene92631.t1 | MTR_0092s0100 | 31.579 | 380 | 226 | 9 | 123 | 488 | 372 | 731 | 3.85e-39 | 151 |
MS.gene92631.t1 | MTR_5g015490 | 28.809 | 361 | 236 | 6 | 149 | 488 | 130 | 490 | 6.45e-37 | 142 |
MS.gene92631.t1 | MTR_4g097080 | 27.397 | 365 | 233 | 11 | 146 | 488 | 149 | 503 | 1.36e-36 | 142 |
MS.gene92631.t1 | MTR_7g109580 | 27.877 | 391 | 249 | 11 | 116 | 488 | 179 | 554 | 1.65e-34 | 136 |
MS.gene92631.t1 | MTR_6g047750 | 27.273 | 385 | 243 | 8 | 125 | 488 | 294 | 662 | 2.68e-34 | 137 |
MS.gene92631.t1 | MTR_1g086970 | 27.387 | 398 | 249 | 11 | 116 | 488 | 96 | 478 | 8.06e-34 | 134 |
MS.gene92631.t1 | MTR_7g057230 | 32.990 | 291 | 178 | 9 | 206 | 487 | 374 | 656 | 1.08e-32 | 132 |
MS.gene92631.t1 | MTR_4g026485 | 27.068 | 399 | 256 | 13 | 107 | 489 | 246 | 625 | 1.32e-32 | 132 |
MS.gene92631.t1 | MTR_5g015950 | 26.014 | 419 | 247 | 13 | 125 | 487 | 34 | 445 | 3.31e-30 | 122 |
MS.gene92631.t1 | MTR_3g053270 | 26.014 | 419 | 247 | 13 | 125 | 487 | 34 | 445 | 3.31e-30 | 122 |
MS.gene92631.t1 | MTR_4g095500 | 24.691 | 486 | 273 | 17 | 76 | 487 | 1 | 467 | 4.31e-29 | 120 |
MS.gene92631.t1 | MTR_2g099110 | 25.568 | 352 | 225 | 8 | 164 | 488 | 110 | 451 | 1.08e-26 | 112 |
MS.gene92631.t1 | MTR_8g077940 | 26.579 | 380 | 248 | 9 | 123 | 488 | 179 | 541 | 1.36e-25 | 110 |
MS.gene92631.t1 | MTR_2g089100 | 23.116 | 398 | 263 | 11 | 126 | 487 | 52 | 442 | 2.84e-24 | 105 |
MS.gene92631.t1 | MTR_8g020840 | 27.157 | 313 | 192 | 9 | 199 | 488 | 249 | 548 | 3.64e-22 | 100 |
MS.gene92631.t1 | MTR_3g022005 | 34.211 | 114 | 63 | 2 | 386 | 488 | 13 | 125 | 2.50e-12 | 64.3 |
MS.gene92631.t1 | MTR_3g022580 | 35.714 | 112 | 66 | 3 | 381 | 488 | 74 | 183 | 1.22e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene92631.t1 | AT1G14920 | 48.738 | 515 | 210 | 11 | 16 | 488 | 27 | 529 | 7.79e-161 | 467 |
MS.gene92631.t1 | AT3G03450 | 47.554 | 511 | 216 | 13 | 19 | 488 | 46 | 545 | 5.85e-151 | 442 |
MS.gene92631.t1 | AT1G66350 | 49.393 | 494 | 211 | 15 | 16 | 488 | 31 | 506 | 6.91e-149 | 436 |
MS.gene92631.t1 | AT5G17490 | 46.061 | 495 | 236 | 10 | 15 | 488 | 32 | 516 | 3.69e-144 | 424 |
MS.gene92631.t1 | AT2G01570 | 54.663 | 386 | 163 | 6 | 107 | 488 | 204 | 581 | 9.10e-142 | 420 |
MS.gene92631.t1 | AT2G01570 | 53.846 | 65 | 29 | 1 | 17 | 80 | 44 | 108 | 4.16e-13 | 72.0 |
MS.gene92631.t1 | AT5G48150 | 36.456 | 395 | 219 | 9 | 113 | 488 | 109 | 490 | 1.35e-66 | 223 |
MS.gene92631.t1 | AT5G48150 | 36.456 | 395 | 219 | 9 | 113 | 488 | 109 | 490 | 1.35e-66 | 223 |
MS.gene92631.t1 | AT5G48150 | 36.456 | 395 | 219 | 9 | 113 | 488 | 109 | 490 | 1.35e-66 | 223 |
MS.gene92631.t1 | AT5G48150 | 36.456 | 395 | 219 | 9 | 113 | 488 | 109 | 490 | 1.35e-66 | 223 |
MS.gene92631.t1 | AT2G04890 | 36.364 | 385 | 221 | 8 | 115 | 488 | 42 | 413 | 2.83e-66 | 219 |
MS.gene92631.t1 | AT1G50600 | 35.750 | 400 | 236 | 8 | 102 | 488 | 135 | 526 | 3.03e-66 | 223 |
MS.gene92631.t1 | AT1G50600 | 35.750 | 400 | 236 | 8 | 102 | 488 | 206 | 597 | 1.03e-65 | 223 |
MS.gene92631.t1 | AT1G50600 | 35.750 | 400 | 236 | 8 | 102 | 488 | 210 | 601 | 1.26e-65 | 223 |
MS.gene92631.t1 | AT5G41920 | 35.443 | 395 | 220 | 13 | 114 | 492 | 29 | 404 | 8.85e-62 | 207 |
MS.gene92631.t1 | AT3G54220 | 35.310 | 371 | 209 | 9 | 130 | 487 | 297 | 649 | 1.27e-59 | 208 |
MS.gene92631.t1 | AT1G21450 | 33.580 | 405 | 247 | 9 | 101 | 488 | 194 | 593 | 3.74e-59 | 205 |
MS.gene92631.t1 | AT1G50420 | 31.390 | 446 | 218 | 11 | 117 | 488 | 48 | 479 | 2.92e-57 | 197 |
MS.gene92631.t1 | AT1G63100 | 34.351 | 393 | 221 | 10 | 121 | 487 | 247 | 628 | 3.11e-57 | 201 |
MS.gene92631.t1 | AT1G63100 | 34.351 | 393 | 221 | 10 | 121 | 487 | 272 | 653 | 5.07e-57 | 201 |
MS.gene92631.t1 | AT4G17230 | 34.961 | 389 | 222 | 12 | 121 | 491 | 153 | 528 | 2.82e-54 | 191 |
MS.gene92631.t1 | AT4G17230 | 34.961 | 389 | 222 | 12 | 121 | 491 | 153 | 528 | 2.82e-54 | 191 |
MS.gene92631.t1 | AT1G55580 | 34.359 | 390 | 217 | 13 | 118 | 488 | 76 | 445 | 1.46e-49 | 176 |
MS.gene92631.t1 | AT1G07530 | 32.061 | 393 | 248 | 8 | 108 | 487 | 378 | 764 | 5.04e-49 | 180 |
MS.gene92631.t1 | AT5G66770 | 33.148 | 359 | 215 | 10 | 147 | 488 | 234 | 584 | 9.86e-48 | 174 |
MS.gene92631.t1 | AT3G46600 | 29.703 | 404 | 265 | 9 | 97 | 488 | 151 | 547 | 7.47e-47 | 171 |
MS.gene92631.t1 | AT5G59450 | 29.323 | 399 | 257 | 9 | 107 | 488 | 208 | 598 | 7.79e-47 | 172 |
MS.gene92631.t1 | AT3G46600 | 29.703 | 404 | 265 | 9 | 97 | 488 | 183 | 579 | 1.24e-46 | 171 |
MS.gene92631.t1 | AT3G46600 | 30.423 | 378 | 244 | 9 | 123 | 488 | 1 | 371 | 9.08e-46 | 164 |
MS.gene92631.t1 | AT2G29060 | 30.990 | 384 | 244 | 10 | 123 | 492 | 281 | 657 | 2.76e-44 | 166 |
MS.gene92631.t1 | AT2G29060 | 30.990 | 384 | 244 | 10 | 123 | 492 | 318 | 694 | 4.94e-44 | 165 |
MS.gene92631.t1 | AT3G50650 | 33.721 | 344 | 201 | 8 | 162 | 488 | 209 | 542 | 1.06e-43 | 162 |
MS.gene92631.t1 | AT1G07520 | 27.750 | 400 | 246 | 12 | 116 | 487 | 144 | 528 | 1.38e-38 | 148 |
MS.gene92631.t1 | AT1G07520 | 27.750 | 400 | 246 | 12 | 116 | 487 | 144 | 528 | 1.38e-38 | 148 |
MS.gene92631.t1 | AT2G29065 | 27.296 | 392 | 239 | 9 | 126 | 487 | 252 | 627 | 1.49e-38 | 149 |
MS.gene92631.t1 | AT1G07520 | 27.750 | 400 | 246 | 12 | 116 | 487 | 308 | 692 | 2.31e-38 | 149 |
MS.gene92631.t1 | AT1G07520 | 27.750 | 400 | 246 | 12 | 116 | 487 | 309 | 693 | 2.76e-38 | 149 |
MS.gene92631.t1 | AT4G08250 | 29.668 | 391 | 247 | 17 | 115 | 487 | 96 | 476 | 3.60e-38 | 146 |
MS.gene92631.t1 | AT2G37650 | 28.052 | 385 | 247 | 10 | 121 | 488 | 330 | 701 | 3.82e-36 | 142 |
MS.gene92631.t1 | AT2G37650 | 28.052 | 385 | 247 | 10 | 121 | 488 | 342 | 713 | 4.17e-36 | 142 |
MS.gene92631.t1 | AT5G52510 | 29.565 | 345 | 215 | 9 | 164 | 488 | 304 | 640 | 7.93e-36 | 141 |
MS.gene92631.t1 | AT4G00150 | 29.023 | 348 | 221 | 9 | 150 | 488 | 224 | 554 | 1.94e-33 | 134 |
MS.gene92631.t1 | AT4G37650 | 27.614 | 373 | 230 | 11 | 150 | 488 | 163 | 529 | 7.62e-32 | 129 |
MS.gene92631.t1 | AT2G45160 | 29.282 | 362 | 217 | 11 | 150 | 488 | 294 | 639 | 8.17e-31 | 126 |
MS.gene92631.t1 | AT4G36710 | 26.794 | 418 | 271 | 12 | 86 | 488 | 88 | 485 | 1.12e-28 | 119 |
MS.gene92631.t1 | AT3G60630 | 28.431 | 306 | 193 | 9 | 196 | 488 | 330 | 622 | 4.93e-28 | 118 |
MS.gene92631.t1 | AT3G49950 | 27.296 | 392 | 251 | 14 | 125 | 492 | 29 | 410 | 6.72e-28 | 115 |
MS.gene92631.t1 | AT3G13840 | 25.309 | 324 | 198 | 11 | 183 | 488 | 213 | 510 | 8.59e-17 | 83.6 |
Find 137 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCATAACGAGAACGGGTTTA+TGG | 0.172499 | 2.2:+30283271 | MS.gene92631:CDS |
TTCGGGTATTGAAATGGTTT+TGG | 0.204240 | 2.2:+30283193 | MS.gene92631:CDS |
CGGGTTCAGACCGTTGCATT+TGG | 0.261310 | 2.2:+30283487 | MS.gene92631:CDS |
CCATAAACCCGTTCTCGTTA+TGG | 0.276597 | 2.2:-30283271 | None:intergenic |
CCGGCCTTTGATTGCGGCTT+CGG | 0.318572 | 2.2:+30283613 | MS.gene92631:CDS |
TCAATACCCGAATGAGAATT+CGG | 0.329389 | 2.2:-30283182 | None:intergenic |
TTTCAGCTGCATCGTCTTCT+CGG | 0.338452 | 2.2:+30283146 | MS.gene92631:CDS |
CGGCATTGGTCCGCCGTCGC+TGG | 0.354188 | 2.2:+30282959 | MS.gene92631:CDS |
CCTCCGTTTCTCCGGCTTAC+CGG | 0.355777 | 2.2:+30282939 | MS.gene92631:CDS |
CTTTGATTGCGGCTTCGGCT+TGG | 0.374762 | 2.2:+30283618 | MS.gene92631:CDS |
CACTATGATCCCTCCGACAT+TGG | 0.380904 | 2.2:+30282363 | MS.gene92631:CDS |
CGTGACAACCTCCGTGAAAT+CGG | 0.385600 | 2.2:+30282987 | MS.gene92631:CDS |
ATCCCTCCGACATTGGCAAT+TGG | 0.385878 | 2.2:+30282370 | MS.gene92631:CDS |
GAATCAAGGGAGCTTGACTT+TGG | 0.395394 | 2.2:+30283580 | MS.gene92631:CDS |
TTCTCATTCGGGTATTGAAA+TGG | 0.397931 | 2.2:+30283187 | MS.gene92631:CDS |
GGGTTCAGACCGTTGCATTT+GGG | 0.405803 | 2.2:+30283488 | MS.gene92631:CDS |
TTTCTCCGGCTTACCGGCAT+TGG | 0.406008 | 2.2:+30282945 | MS.gene92631:CDS |
TGACTCGCTTGAAGCGTGTC+CGG | 0.418691 | 2.2:+30283334 | MS.gene92631:CDS |
GCTTTGAACCGTCGCATCTT+CGG | 0.420783 | 2.2:+30282693 | MS.gene92631:CDS |
TTCGAGTATAGCTTGATTTG+CGG | 0.426009 | 2.2:-30282814 | None:intergenic |
AACGTTAGATTCGCCTTTCG+CGG | 0.429000 | 2.2:+30283041 | MS.gene92631:CDS |
CCACGCCGCAACGCCGCGAA+AGG | 0.429090 | 2.2:-30283054 | None:intergenic |
TGTAAAGCCATGGATGCTTC+AGG | 0.430657 | 2.2:+30283088 | MS.gene92631:CDS |
AATCAAGGGAGCTTGACTTT+GGG | 0.434762 | 2.2:+30283581 | MS.gene92631:CDS |
AGAGGCCGTGTGGTCAAATT+CGG | 0.437374 | 2.2:-30282409 | None:intergenic |
TGACTTTGGGTTGGCATAGC+CGG | 0.439605 | 2.2:+30283594 | MS.gene92631:CDS |
CGGGTTTATGGAACGGTTCA+CGG | 0.439903 | 2.2:+30283283 | MS.gene92631:CDS |
CAAGCTCTTGCTCTTCGTCC+TGG | 0.444577 | 2.2:+30282912 | MS.gene92631:CDS |
CGTAGTGTGCTGCGAGGGAC+CGG | 0.445861 | 2.2:+30283409 | MS.gene92631:CDS |
TCCCTCCGACATTGGCAATT+GGG | 0.446214 | 2.2:+30282371 | MS.gene92631:CDS |
CGGTGAAGTGTGCGAATTTG+AGG | 0.451224 | 2.2:-30282794 | None:intergenic |
CGACATTTCTCAATTTGCTT+CGG | 0.452551 | 2.2:+30282332 | MS.gene92631:CDS |
CGAGACGGAGGCCGATTTCA+CGG | 0.453634 | 2.2:-30282998 | None:intergenic |
TAGAGGATTGGTGGTGGTGG+TGG | 0.456379 | 2.2:-30282485 | None:intergenic |
ATCCGACCCGAATTCTCATT+CGG | 0.456753 | 2.2:+30283175 | MS.gene92631:CDS |
CAATACCCGAATGAGAATTC+GGG | 0.457985 | 2.2:-30283181 | None:intergenic |
ATCTCGGCCATAGCTTTATC+CGG | 0.466984 | 2.2:-30283362 | None:intergenic |
TCCGACCCGAATTCTCATTC+GGG | 0.467756 | 2.2:+30283176 | MS.gene92631:CDS |
ATAGCTTTATCCGGTTCAAC+CGG | 0.472673 | 2.2:-30283353 | None:intergenic |
AAGCGAACCATAACGAGAAC+GGG | 0.473338 | 2.2:+30283264 | MS.gene92631:CDS |
TGAAGCGTGTCCGGTTGAAC+CGG | 0.475946 | 2.2:+30283343 | MS.gene92631:CDS |
CAGCGACGGCGGACCAATGC+CGG | 0.478193 | 2.2:-30282958 | None:intergenic |
GACATGAACCGTTGGTTAAG+TGG | 0.479723 | 2.2:+30283444 | MS.gene92631:CDS |
AAGGAGCGGCTCGGTAAAGC+CGG | 0.483410 | 2.2:+30283467 | MS.gene92631:CDS |
TGGTGGTGGTGGTGTTGTGA+CGG | 0.493999 | 2.2:-30282474 | None:intergenic |
CCTTTCGCGGCGTTGCGGCG+TGG | 0.496391 | 2.2:+30283054 | MS.gene92631:CDS |
CGGAGAAACGGAGGTCCGCC+AGG | 0.496483 | 2.2:-30282930 | None:intergenic |
CGTGGTAATCTTCCATTGGC+TGG | 0.502641 | 2.2:+30282585 | MS.gene92631:CDS |
TTCGCGGCGTTGCGGCGTGG+CGG | 0.506872 | 2.2:+30283057 | MS.gene92631:CDS |
CTCTCTTTGTAAATACATCT+CGG | 0.511803 | 2.2:-30283378 | None:intergenic |
CAAAGCGTCGATGAAGTATC+CGG | 0.512312 | 2.2:-30282676 | None:intergenic |
GACGGCGGTGCTGAGAGATC+TGG | 0.512412 | 2.2:-30282456 | None:intergenic |
CTGGCGGACCTCCGTTTCTC+CGG | 0.512726 | 2.2:+30282931 | MS.gene92631:CDS |
GCGGACCAATGCCGGTAAGC+CGG | 0.513787 | 2.2:-30282950 | None:intergenic |
ACCTCATGCATGGTCTTCAA+TGG | 0.514040 | 2.2:+30282877 | MS.gene92631:CDS |
GAACTCACCTGAAGCATCCA+TGG | 0.518449 | 2.2:-30283095 | None:intergenic |
GCATAGCCGGCCTTTGATTG+CGG | 0.520541 | 2.2:+30283607 | MS.gene92631:CDS |
ATTCGCCTTTCGCGGCGTTG+CGG | 0.526404 | 2.2:+30283049 | MS.gene92631:CDS |
CAAGCCGAAGCCGCAATCAA+AGG | 0.528493 | 2.2:-30283617 | None:intergenic |
AAGGGAGCTTGACTTTGGGT+TGG | 0.530891 | 2.2:+30283585 | MS.gene92631:CDS |
TCGTTAATCGAAGGCATGCA+AGG | 0.531649 | 2.2:+30282609 | MS.gene92631:CDS |
CCGAAGCCGCAATCAAAGGC+CGG | 0.539000 | 2.2:-30283613 | None:intergenic |
CGCTCCTTCCACTTAACCAA+CGG | 0.539436 | 2.2:-30283452 | None:intergenic |
ATGCCGGTAAGCCGGAGAAA+CGG | 0.543739 | 2.2:-30282942 | None:intergenic |
CGTTCTCGTAAAGAGAAACT+TGG | 0.543788 | 2.2:-30282734 | None:intergenic |
TCGATTAACGAGCCAGCCAA+TGG | 0.545335 | 2.2:-30282597 | None:intergenic |
TATTAACTGTCGTAGAGGAT+TGG | 0.548033 | 2.2:-30282497 | None:intergenic |
CAAATGCAACGGTCTGAACC+CGG | 0.552323 | 2.2:-30283486 | None:intergenic |
GCAACGTGGTAATCTTCCAT+TGG | 0.552649 | 2.2:+30282581 | MS.gene92631:CDS |
AGAGAAATCGTAGGGTAAAG+AGG | 0.554274 | 2.2:-30282427 | None:intergenic |
ATGAACACAATCTCCGGCAT+CGG | 0.555034 | 2.2:+30282645 | MS.gene92631:CDS |
TCTGACTTTGTAGCCGACAT+TGG | 0.557024 | 2.2:-30282241 | None:intergenic |
GCAAACATGAACACAATCTC+CGG | 0.557304 | 2.2:+30282639 | MS.gene92631:CDS |
TGGAAGATTACCACGTTGCA+CGG | 0.558728 | 2.2:-30282577 | None:intergenic |
CACCCAATTGCCAATGTCGG+AGG | 0.559532 | 2.2:-30282373 | None:intergenic |
TAACTGTCGTAGAGGATTGG+TGG | 0.563126 | 2.2:-30282494 | None:intergenic |
ATTGATTTCAACCTCATGCA+TGG | 0.563574 | 2.2:+30282867 | MS.gene92631:CDS |
AAAGGCGAATCTAACGTTAA+CGG | 0.563777 | 2.2:-30283036 | None:intergenic |
AGGAGCGGCTCGGTAAAGCC+GGG | 0.565092 | 2.2:+30283468 | MS.gene92631:CDS |
TCATGTCTCTCAACTCGAGC+CGG | 0.568274 | 2.2:-30283428 | None:intergenic |
TATTGCGTGGAAGAGAATCA+AGG | 0.570726 | 2.2:+30283566 | MS.gene92631:CDS |
GACAAGCTTCGTAGTAGTGA+TGG | 0.571422 | 2.2:-30282767 | None:intergenic |
TCGTAGAGGATTGGTGGTGG+TGG | 0.573506 | 2.2:-30282488 | None:intergenic |
TCCGGCATCGGAAAAGTCGC+CGG | 0.573578 | 2.2:+30282657 | MS.gene92631:CDS |
GAAGCGAACCATAACGAGAA+CGG | 0.581490 | 2.2:+30283263 | MS.gene92631:CDS |
GTCCACCCAATTGCCAATGT+CGG | 0.582283 | 2.2:-30282376 | None:intergenic |
ACGTTGCACGGAATCTGCAC+AGG | 0.591505 | 2.2:-30282565 | None:intergenic |
CTTTGTAGCCGACATTGGCA+AGG | 0.593493 | 2.2:-30282236 | None:intergenic |
AAGTGTGCGAATTTGAGGTA+TGG | 0.594726 | 2.2:-30282789 | None:intergenic |
GGTTGAACCGGATAAAGCTA+TGG | 0.595176 | 2.2:+30283355 | MS.gene92631:CDS |
TCTCGTAAAGAGAAACTTGG+TGG | 0.598426 | 2.2:-30282731 | None:intergenic |
CGATTTCACGGAGGTTGTCA+CGG | 0.600453 | 2.2:-30282986 | None:intergenic |
TGGTGGTGGTGTTGTGACGG+CGG | 0.602575 | 2.2:-30282471 | None:intergenic |
GGAAGTTCAGAGAAATCGTA+GGG | 0.603775 | 2.2:-30282435 | None:intergenic |
GCTCTTGCTCTTCGTCCTGG+CGG | 0.606990 | 2.2:+30282915 | MS.gene92631:CDS |
CTCCGACATTGGCAATTGGG+TGG | 0.609033 | 2.2:+30282374 | MS.gene92631:CDS |
ACCCAATTGCCAATGTCGGA+GGG | 0.609324 | 2.2:-30282372 | None:intergenic |
GACAGTATTAACTGTCGTAG+AGG | 0.614871 | 2.2:-30282502 | None:intergenic |
TGGAAGTTCAGAGAAATCGT+AGG | 0.615760 | 2.2:-30282436 | None:intergenic |
TGCAACGTAGTGTGCTGCGA+GGG | 0.616117 | 2.2:+30283404 | MS.gene92631:CDS |
AGCGTGCAAGTTCAGCGAGA+CGG | 0.617149 | 2.2:-30283013 | None:intergenic |
GACGGCCTCCTTGCCAATGT+CGG | 0.620771 | 2.2:+30282228 | MS.gene92631:CDS |
CGTTAATCGAAGGCATGCAA+GGG | 0.622830 | 2.2:+30282610 | MS.gene92631:CDS |
TGAACCGTTGGTTAAGTGGA+AGG | 0.623165 | 2.2:+30283448 | MS.gene92631:CDS |
ACGAGAACGGGTTTATGGAA+CGG | 0.624479 | 2.2:+30283276 | MS.gene92631:CDS |
GTTAAGTGGAAGGAGCGGCT+CGG | 0.631755 | 2.2:+30283458 | MS.gene92631:CDS |
TTGGCTGGCTCGTTAATCGA+AGG | 0.631890 | 2.2:+30282600 | MS.gene92631:CDS |
TTCAGCGGAGGGTTATTGCG+TGG | 0.637968 | 2.2:+30283553 | MS.gene92631:CDS |
ATTGCGTGGAAGAGAATCAA+GGG | 0.640198 | 2.2:+30283567 | MS.gene92631:CDS |
AGTTGAGAGACATGAACCGT+TGG | 0.643232 | 2.2:+30283436 | MS.gene92631:CDS |
GCATTCGAACCCAAATGCAA+CGG | 0.649133 | 2.2:-30283497 | None:intergenic |
GCAAGAGCTTGAATTAACGC+TGG | 0.649987 | 2.2:-30282900 | None:intergenic |
TCACGGTCATCCAGCGACGG+CGG | 0.651033 | 2.2:-30282969 | None:intergenic |
CAATGTCGGAGGGATCATAG+TGG | 0.653195 | 2.2:-30282362 | None:intergenic |
GGTGAGTTCTAAAGAAGCTG+TGG | 0.654073 | 2.2:+30283109 | MS.gene92631:CDS |
GTGCAAGTTCAGCGAGACGG+AGG | 0.656208 | 2.2:-30283010 | None:intergenic |
GAGTTCTAAAGAAGCTGTGG+CGG | 0.658727 | 2.2:+30283112 | MS.gene92631:CDS |
TTGTCACGGTCATCCAGCGA+CGG | 0.659920 | 2.2:-30282972 | None:intergenic |
CGTTGGTTAAGTGGAAGGAG+CGG | 0.660011 | 2.2:+30283453 | MS.gene92631:CDS |
TGTAGCCGACATTGGCAAGG+AGG | 0.660431 | 2.2:-30282233 | None:intergenic |
CTGTCGTAGAGGATTGGTGG+TGG | 0.661441 | 2.2:-30282491 | None:intergenic |
CAATGACGTGGACACAATCG+TGG | 0.665351 | 2.2:-30282848 | None:intergenic |
TCAAAGACAAAAGACATCGA+CGG | 0.665997 | 2.2:+30282210 | MS.gene92631:CDS |
CTGCACAGGTCATCAGCATG+TGG | 0.667697 | 2.2:-30282551 | None:intergenic |
CCGGTAAGCCGGAGAAACGG+AGG | 0.669681 | 2.2:-30282939 | None:intergenic |
CCTCTCCGAATTTGACCACA+CGG | 0.676826 | 2.2:+30282404 | MS.gene92631:CDS |
GGCTTGAAGATGTAAAGCCA+TGG | 0.681200 | 2.2:+30283078 | MS.gene92631:CDS |
ATGCAACGTAGTGTGCTGCG+AGG | 0.694303 | 2.2:+30283403 | MS.gene92631:CDS |
AGTGTTTCAGCATCTAACAA+AGG | 0.702442 | 2.2:-30283650 | None:intergenic |
CGTAGGGTAAAGAGGCCGTG+TGG | 0.707233 | 2.2:-30282419 | None:intergenic |
GCCATTGAAGACCATGCATG+AGG | 0.712810 | 2.2:-30282878 | None:intergenic |
ACCCGAATGAGAATTCGGGT+CGG | 0.713077 | 2.2:-30283177 | None:intergenic |
CCGTGTGGTCAAATTCGGAG+AGG | 0.714620 | 2.2:-30282404 | None:intergenic |
TGAGGTTGAAATCAATGACG+TGG | 0.716676 | 2.2:-30282860 | None:intergenic |
GACGGAGGCCGATTTCACGG+AGG | 0.751201 | 2.2:-30282995 | None:intergenic |
TGTGCAGATTCCGTGCAACG+TGG | 0.753527 | 2.2:+30282567 | MS.gene92631:CDS |
GTTTATGGAACGGTTCACGG+AGG | 0.758651 | 2.2:+30283286 | MS.gene92631:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
CTCTCTTTGTAAATACATCT+CGG | - | chr2.2:30283381-30283400 | None:intergenic | 30.0% | |
! | TCAACAACTGTAACGATTTT+CGG | - | chr2.2:30283239-30283258 | None:intergenic | 30.0% |
AAAGGCGAATCTAACGTTAA+CGG | - | chr2.2:30283039-30283058 | None:intergenic | 35.0% | |
AGTGTTTCAGCATCTAACAA+AGG | - | chr2.2:30283653-30283672 | None:intergenic | 35.0% | |
TATTAACTGTCGTAGAGGAT+TGG | - | chr2.2:30282500-30282519 | None:intergenic | 35.0% | |
TCAAAGACAAAAGACATCGA+CGG | + | chr2.2:30282210-30282229 | MS.gene92631:CDS | 35.0% | |
TCAATACCCGAATGAGAATT+CGG | - | chr2.2:30283185-30283204 | None:intergenic | 35.0% | |
! | ATTGATTTCAACCTCATGCA+TGG | + | chr2.2:30282867-30282886 | MS.gene92631:CDS | 35.0% |
! | CGACATTTCTCAATTTGCTT+CGG | + | chr2.2:30282332-30282351 | MS.gene92631:CDS | 35.0% |
! | CGATGTCTTTTGTCTTTGAT+GGG | - | chr2.2:30282209-30282228 | None:intergenic | 35.0% |
! | GATGTCTTTTGTCTTTGATG+GGG | - | chr2.2:30282208-30282227 | None:intergenic | 35.0% |
! | TCGATGTCTTTTGTCTTTGA+TGG | - | chr2.2:30282210-30282229 | None:intergenic | 35.0% |
! | TTCGAGTATAGCTTGATTTG+CGG | - | chr2.2:30282817-30282836 | None:intergenic | 35.0% |
!! | TTCTCATTCGGGTATTGAAA+TGG | + | chr2.2:30283187-30283206 | MS.gene92631:CDS | 35.0% |
!!! | GTATTGAAATGGTTTTGGGT+TGG | + | chr2.2:30283198-30283217 | MS.gene92631:CDS | 35.0% |
!!! | TCGGGTATTGAAATGGTTTT+GGG | + | chr2.2:30283194-30283213 | MS.gene92631:CDS | 35.0% |
!!! | TTCGGGTATTGAAATGGTTT+TGG | + | chr2.2:30283193-30283212 | MS.gene92631:CDS | 35.0% |
AATCAAGGGAGCTTGACTTT+GGG | + | chr2.2:30283581-30283600 | MS.gene92631:CDS | 40.0% | |
AGAGAAATCGTAGGGTAAAG+AGG | - | chr2.2:30282430-30282449 | None:intergenic | 40.0% | |
ATTGCGTGGAAGAGAATCAA+GGG | + | chr2.2:30283567-30283586 | MS.gene92631:CDS | 40.0% | |
CAATACCCGAATGAGAATTC+GGG | - | chr2.2:30283184-30283203 | None:intergenic | 40.0% | |
CGTTCTCGTAAAGAGAAACT+TGG | - | chr2.2:30282737-30282756 | None:intergenic | 40.0% | |
GACAGTATTAACTGTCGTAG+AGG | - | chr2.2:30282505-30282524 | None:intergenic | 40.0% | |
GCAAACATGAACACAATCTC+CGG | + | chr2.2:30282639-30282658 | MS.gene92631:CDS | 40.0% | |
GGAAGTTCAGAGAAATCGTA+GGG | - | chr2.2:30282438-30282457 | None:intergenic | 40.0% | |
TATTGCGTGGAAGAGAATCA+AGG | + | chr2.2:30283566-30283585 | MS.gene92631:CDS | 40.0% | |
TCTCGTAAAGAGAAACTTGG+TGG | - | chr2.2:30282734-30282753 | None:intergenic | 40.0% | |
TGAGGTTGAAATCAATGACG+TGG | - | chr2.2:30282863-30282882 | None:intergenic | 40.0% | |
TGGAAGTTCAGAGAAATCGT+AGG | - | chr2.2:30282439-30282458 | None:intergenic | 40.0% | |
! | AAGTGTGCGAATTTGAGGTA+TGG | - | chr2.2:30282792-30282811 | None:intergenic | 40.0% |
! | CGATTTTCGGATTCAAACTC+CGG | - | chr2.2:30283226-30283245 | None:intergenic | 40.0% |
!! | ATAGCTTTATCCGGTTCAAC+CGG | - | chr2.2:30283356-30283375 | None:intergenic | 40.0% |
!!! | AAATGGTTTTGGGTTGGATC+CGG | + | chr2.2:30283204-30283223 | MS.gene92631:CDS | 40.0% |
!!! | GTTGTTGACTCTGTTTTCAG+CGG | + | chr2.2:30283538-30283557 | MS.gene92631:CDS | 40.0% |
AACGTTAGATTCGCCTTTCG+CGG | + | chr2.2:30283041-30283060 | MS.gene92631:CDS | 45.0% | |
AAGCGAACCATAACGAGAAC+GGG | + | chr2.2:30283264-30283283 | MS.gene92631:CDS | 45.0% | |
ACCTCATGCATGGTCTTCAA+TGG | + | chr2.2:30282877-30282896 | MS.gene92631:CDS | 45.0% | |
AGTTGAGAGACATGAACCGT+TGG | + | chr2.2:30283436-30283455 | MS.gene92631:CDS | 45.0% | |
ATCCGACCCGAATTCTCATT+CGG | + | chr2.2:30283175-30283194 | MS.gene92631:CDS | 45.0% | |
ATGAACACAATCTCCGGCAT+CGG | + | chr2.2:30282645-30282664 | MS.gene92631:CDS | 45.0% | |
CCATAAACCCGTTCTCGTTA+TGG | - | chr2.2:30283274-30283293 | None:intergenic | 45.0% | |
CGCTTCAAGCGAGTCAAAAA+CGG | - | chr2.2:30283330-30283349 | None:intergenic | 45.0% | |
GAAGCGAACCATAACGAGAA+CGG | + | chr2.2:30283263-30283282 | MS.gene92631:CDS | 45.0% | |
GAATCAAGGGAGCTTGACTT+TGG | + | chr2.2:30283580-30283599 | MS.gene92631:CDS | 45.0% | |
GACAAGCTTCGTAGTAGTGA+TGG | - | chr2.2:30282770-30282789 | None:intergenic | 45.0% | |
GCAACGTGGTAATCTTCCAT+TGG | + | chr2.2:30282581-30282600 | MS.gene92631:CDS | 45.0% | |
GCAAGAGCTTGAATTAACGC+TGG | - | chr2.2:30282903-30282922 | None:intergenic | 45.0% | |
GCATTCGAACCCAAATGCAA+CGG | - | chr2.2:30283500-30283519 | None:intergenic | 45.0% | |
GGCTTGAAGATGTAAAGCCA+TGG | + | chr2.2:30283078-30283097 | MS.gene92631:CDS | 45.0% | |
GGTTGAACCGGATAAAGCTA+TGG | + | chr2.2:30283355-30283374 | MS.gene92631:CDS | 45.0% | |
TAACTGTCGTAGAGGATTGG+TGG | - | chr2.2:30282497-30282516 | None:intergenic | 45.0% | |
TCTGACTTTGTAGCCGACAT+TGG | - | chr2.2:30282244-30282263 | None:intergenic | 45.0% | |
TGGAAGATTACCACGTTGCA+CGG | - | chr2.2:30282580-30282599 | None:intergenic | 45.0% | |
TGTAAAGCCATGGATGCTTC+AGG | + | chr2.2:30283088-30283107 | MS.gene92631:CDS | 45.0% | |
TTTCAGCTGCATCGTCTTCT+CGG | + | chr2.2:30283146-30283165 | MS.gene92631:CDS | 45.0% | |
! | ACGAGAACGGGTTTATGGAA+CGG | + | chr2.2:30283276-30283295 | MS.gene92631:CDS | 45.0% |
! | CCATAACGAGAACGGGTTTA+TGG | + | chr2.2:30283271-30283290 | MS.gene92631:CDS | 45.0% |
! | CGTTAATCGAAGGCATGCAA+GGG | + | chr2.2:30282610-30282629 | MS.gene92631:CDS | 45.0% |
! | GACATGAACCGTTGGTTAAG+TGG | + | chr2.2:30283444-30283463 | MS.gene92631:CDS | 45.0% |
! | TCGTTAATCGAAGGCATGCA+AGG | + | chr2.2:30282609-30282628 | MS.gene92631:CDS | 45.0% |
! | TGAACCGTTGGTTAAGTGGA+AGG | + | chr2.2:30283448-30283467 | MS.gene92631:CDS | 45.0% |
! | TTGACTCTGTTTTCAGCGGA+GGG | + | chr2.2:30283542-30283561 | MS.gene92631:CDS | 45.0% |
!! | ATCTCGGCCATAGCTTTATC+CGG | - | chr2.2:30283365-30283384 | None:intergenic | 45.0% |
!! | CAAAGCGTCGATGAAGTATC+CGG | - | chr2.2:30282679-30282698 | None:intergenic | 45.0% |
!! | GAGTTCTAAAGAAGCTGTGG+CGG | + | chr2.2:30283112-30283131 | MS.gene92631:CDS | 45.0% |
!! | GGTGAGTTCTAAAGAAGCTG+TGG | + | chr2.2:30283109-30283128 | MS.gene92631:CDS | 45.0% |
!!! | TGTTTTGACCGAAGATGCGA+CGG | - | chr2.2:30282704-30282723 | None:intergenic | 45.0% |
AAGGGAGCTTGACTTTGGGT+TGG | + | chr2.2:30283585-30283604 | MS.gene92631:CDS | 50.0% | |
ACCCAATTGCCAATGTCGGA+GGG | - | chr2.2:30282375-30282394 | None:intergenic | 50.0% | |
ACCCGAATGAGAATTCGGGT+CGG | - | chr2.2:30283180-30283199 | None:intergenic | 50.0% | |
AGAGGCCGTGTGGTCAAATT+CGG | - | chr2.2:30282412-30282431 | None:intergenic | 50.0% | |
ATCCCTCCGACATTGGCAAT+TGG | + | chr2.2:30282370-30282389 | MS.gene92631:CDS | 50.0% | |
CAAATGCAACGGTCTGAACC+CGG | - | chr2.2:30283489-30283508 | None:intergenic | 50.0% | |
CAATGACGTGGACACAATCG+TGG | - | chr2.2:30282851-30282870 | None:intergenic | 50.0% | |
CAATGTCGGAGGGATCATAG+TGG | - | chr2.2:30282365-30282384 | None:intergenic | 50.0% | |
CACTATGATCCCTCCGACAT+TGG | + | chr2.2:30282363-30282382 | MS.gene92631:CDS | 50.0% | |
CCTCTCCGAATTTGACCACA+CGG | + | chr2.2:30282404-30282423 | MS.gene92631:CDS | 50.0% | |
CGATTTCACGGAGGTTGTCA+CGG | - | chr2.2:30282989-30283008 | None:intergenic | 50.0% | |
CGCTCCTTCCACTTAACCAA+CGG | - | chr2.2:30283455-30283474 | None:intergenic | 50.0% | |
CGGGTTTATGGAACGGTTCA+CGG | + | chr2.2:30283283-30283302 | MS.gene92631:CDS | 50.0% | |
CGGTGAAGTGTGCGAATTTG+AGG | - | chr2.2:30282797-30282816 | None:intergenic | 50.0% | |
CGTGACAACCTCCGTGAAAT+CGG | + | chr2.2:30282987-30283006 | MS.gene92631:CDS | 50.0% | |
CGTGGTAATCTTCCATTGGC+TGG | + | chr2.2:30282585-30282604 | MS.gene92631:CDS | 50.0% | |
CTTTGTAGCCGACATTGGCA+AGG | - | chr2.2:30282239-30282258 | None:intergenic | 50.0% | |
GCCATTGAAGACCATGCATG+AGG | - | chr2.2:30282881-30282900 | None:intergenic | 50.0% | |
GGGTTCAGACCGTTGCATTT+GGG | + | chr2.2:30283488-30283507 | MS.gene92631:CDS | 50.0% | |
GTCCACCCAATTGCCAATGT+CGG | - | chr2.2:30282379-30282398 | None:intergenic | 50.0% | |
GTTTATGGAACGGTTCACGG+AGG | + | chr2.2:30283286-30283305 | MS.gene92631:CDS | 50.0% | |
TCATGTCTCTCAACTCGAGC+CGG | - | chr2.2:30283431-30283450 | None:intergenic | 50.0% | |
TCCCTCCGACATTGGCAATT+GGG | + | chr2.2:30282371-30282390 | MS.gene92631:CDS | 50.0% | |
TCCGACCCGAATTCTCATTC+GGG | + | chr2.2:30283176-30283195 | MS.gene92631:CDS | 50.0% | |
TCGATTAACGAGCCAGCCAA+TGG | - | chr2.2:30282600-30282619 | None:intergenic | 50.0% | |
! | CGTTGGTTAAGTGGAAGGAG+CGG | + | chr2.2:30283453-30283472 | MS.gene92631:CDS | 50.0% |
! | GAACTCACCTGAAGCATCCA+TGG | - | chr2.2:30283098-30283117 | None:intergenic | 50.0% |
! | GCTTTGAACCGTCGCATCTT+CGG | + | chr2.2:30282693-30282712 | MS.gene92631:CDS | 50.0% |
!! | GTTGACTCTGTTTTCAGCGG+AGG | + | chr2.2:30283541-30283560 | MS.gene92631:CDS | 50.0% |
!! | TGACTTTGGGTTGGCATAGC+CGG | + | chr2.2:30283594-30283613 | MS.gene92631:CDS | 50.0% |
!! | TTGGCTGGCTCGTTAATCGA+AGG | + | chr2.2:30282600-30282619 | MS.gene92631:CDS | 50.0% |
ACGTTGCACGGAATCTGCAC+AGG | - | chr2.2:30282568-30282587 | None:intergenic | 55.0% | |
AGCGTGCAAGTTCAGCGAGA+CGG | - | chr2.2:30283016-30283035 | None:intergenic | 55.0% | |
ATGCAACGTAGTGTGCTGCG+AGG | + | chr2.2:30283403-30283422 | MS.gene92631:CDS | 55.0% | |
ATGCCGGTAAGCCGGAGAAA+CGG | - | chr2.2:30282945-30282964 | None:intergenic | 55.0% | |
CAAGCCGAAGCCGCAATCAA+AGG | - | chr2.2:30283620-30283639 | None:intergenic | 55.0% | |
CAAGCTCTTGCTCTTCGTCC+TGG | + | chr2.2:30282912-30282931 | MS.gene92631:CDS | 55.0% | |
CACCCAATTGCCAATGTCGG+AGG | - | chr2.2:30282376-30282395 | None:intergenic | 55.0% | |
CCGTGTGGTCAAATTCGGAG+AGG | - | chr2.2:30282407-30282426 | None:intergenic | 55.0% | |
CGGGTTCAGACCGTTGCATT+TGG | + | chr2.2:30283487-30283506 | MS.gene92631:CDS | 55.0% | |
CTCCGACATTGGCAATTGGG+TGG | + | chr2.2:30282374-30282393 | MS.gene92631:CDS | 55.0% | |
CTGCACAGGTCATCAGCATG+TGG | - | chr2.2:30282554-30282573 | None:intergenic | 55.0% | |
CTTTGATTGCGGCTTCGGCT+TGG | + | chr2.2:30283618-30283637 | MS.gene92631:CDS | 55.0% | |
GCATAGCCGGCCTTTGATTG+CGG | + | chr2.2:30283607-30283626 | MS.gene92631:CDS | 55.0% | |
GTTAAGTGGAAGGAGCGGCT+CGG | + | chr2.2:30283458-30283477 | MS.gene92631:CDS | 55.0% | |
TGAAGCGTGTCCGGTTGAAC+CGG | + | chr2.2:30283343-30283362 | MS.gene92631:CDS | 55.0% | |
TGACTCGCTTGAAGCGTGTC+CGG | + | chr2.2:30283334-30283353 | MS.gene92631:CDS | 55.0% | |
TGCAACGTAGTGTGCTGCGA+GGG | + | chr2.2:30283404-30283423 | MS.gene92631:CDS | 55.0% | |
TGTAGCCGACATTGGCAAGG+AGG | - | chr2.2:30282236-30282255 | None:intergenic | 55.0% | |
TGTGCAGATTCCGTGCAACG+TGG | + | chr2.2:30282567-30282586 | MS.gene92631:CDS | 55.0% | |
TTCAGCGGAGGGTTATTGCG+TGG | + | chr2.2:30283553-30283572 | MS.gene92631:CDS | 55.0% | |
TTGTCACGGTCATCCAGCGA+CGG | - | chr2.2:30282975-30282994 | None:intergenic | 55.0% | |
TTTCTCCGGCTTACCGGCAT+TGG | + | chr2.2:30282945-30282964 | MS.gene92631:CDS | 55.0% | |
! | CTGTCGTAGAGGATTGGTGG+TGG | - | chr2.2:30282494-30282513 | None:intergenic | 55.0% |
!! | TAGAGGATTGGTGGTGGTGG+TGG | - | chr2.2:30282488-30282507 | None:intergenic | 55.0% |
!! | TCGTAGAGGATTGGTGGTGG+TGG | - | chr2.2:30282491-30282510 | None:intergenic | 55.0% |
!! | TGGTGGTGGTGGTGTTGTGA+CGG | - | chr2.2:30282477-30282496 | None:intergenic | 55.0% |
ATTCGCCTTTCGCGGCGTTG+CGG | + | chr2.2:30283049-30283068 | MS.gene92631:CDS | 60.0% | |
CCGAAGCCGCAATCAAAGGC+CGG | - | chr2.2:30283616-30283635 | None:intergenic | 60.0% | |
CCGGCCTTTGATTGCGGCTT+CGG | + | chr2.2:30283613-30283632 | MS.gene92631:CDS | 60.0% | |
CCTCCGTTTCTCCGGCTTAC+CGG | + | chr2.2:30282939-30282958 | MS.gene92631:CDS | 60.0% | |
CGTAGGGTAAAGAGGCCGTG+TGG | - | chr2.2:30282422-30282441 | None:intergenic | 60.0% | |
GACGGCCTCCTTGCCAATGT+CGG | + | chr2.2:30282228-30282247 | MS.gene92631:CDS | 60.0% | |
GCTCTTGCTCTTCGTCCTGG+CGG | + | chr2.2:30282915-30282934 | MS.gene92631:CDS | 60.0% | |
GTGCAAGTTCAGCGAGACGG+AGG | - | chr2.2:30283013-30283032 | None:intergenic | 60.0% | |
! | CGAGACGGAGGCCGATTTCA+CGG | - | chr2.2:30283001-30283020 | None:intergenic | 60.0% |
! | TCCGGCATCGGAAAAGTCGC+CGG | + | chr2.2:30282657-30282676 | MS.gene92631:CDS | 60.0% |
! | TCCGGCGACTTTTCCGATGC+CGG | - | chr2.2:30282661-30282680 | None:intergenic | 60.0% |
!! | AAGGAGCGGCTCGGTAAAGC+CGG | + | chr2.2:30283467-30283486 | MS.gene92631:CDS | 60.0% |
!! | TGGTGGTGGTGTTGTGACGG+CGG | - | chr2.2:30282474-30282493 | None:intergenic | 60.0% |
CCGGTAAGCCGGAGAAACGG+AGG | - | chr2.2:30282942-30282961 | None:intergenic | 65.0% | |
CGTAGTGTGCTGCGAGGGAC+CGG | + | chr2.2:30283409-30283428 | MS.gene92631:CDS | 65.0% | |
GCGGACCAATGCCGGTAAGC+CGG | - | chr2.2:30282953-30282972 | None:intergenic | 65.0% | |
TCACGGTCATCCAGCGACGG+CGG | - | chr2.2:30282972-30282991 | None:intergenic | 65.0% | |
! | CTGGCGGACCTCCGTTTCTC+CGG | + | chr2.2:30282931-30282950 | MS.gene92631:CDS | 65.0% |
! | GACGGAGGCCGATTTCACGG+AGG | - | chr2.2:30282998-30283017 | None:intergenic | 65.0% |
! | GACGGCGGTGCTGAGAGATC+TGG | - | chr2.2:30282459-30282478 | None:intergenic | 65.0% |
!! | AGGAGCGGCTCGGTAAAGCC+GGG | + | chr2.2:30283468-30283487 | MS.gene92631:CDS | 65.0% |
CAGCGACGGCGGACCAATGC+CGG | - | chr2.2:30282961-30282980 | None:intergenic | 70.0% | |
CGGAGAAACGGAGGTCCGCC+AGG | - | chr2.2:30282933-30282952 | None:intergenic | 70.0% | |
CCACGCCGCAACGCCGCGAA+AGG | - | chr2.2:30283057-30283076 | None:intergenic | 75.0% | |
CCTTTCGCGGCGTTGCGGCG+TGG | + | chr2.2:30283054-30283073 | MS.gene92631:CDS | 75.0% | |
TTCGCGGCGTTGCGGCGTGG+CGG | + | chr2.2:30283057-30283076 | MS.gene92631:CDS | 75.0% | |
!! | CGGCATTGGTCCGCCGTCGC+TGG | + | chr2.2:30282959-30282978 | MS.gene92631:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 30282180 | 30283688 | 30282180 | ID=MS.gene92631 |
chr2.2 | mRNA | 30282180 | 30283688 | 30282180 | ID=MS.gene92631.t1;Parent=MS.gene92631 |
chr2.2 | exon | 30282180 | 30283688 | 30282180 | ID=MS.gene92631.t1.exon1;Parent=MS.gene92631.t1 |
chr2.2 | CDS | 30282180 | 30283688 | 30282180 | ID=cds.MS.gene92631.t1;Parent=MS.gene92631.t1 |
Gene Sequence |
Protein sequence |