AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene93078

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene93078.t1 MTR_8g069935 78.411 491 73 5 1 486 1 463 0.0 582
MS.gene93078.t1 MTR_8g067650 52.462 528 199 9 1 485 1 519 6.03e-141 415
MS.gene93078.t1 MTR_8g067635 51.336 524 199 9 1 471 1 521 2.93e-137 406
MS.gene93078.t1 MTR_6g053200 45.699 558 209 12 1 486 1 536 8.53e-112 341
MS.gene93078.t1 MTR_2g024380 38.621 435 134 10 151 486 70 470 1.40e-74 243
MS.gene93078.t1 MTR_2g024380 47.716 197 57 3 1 154 1 194 1.67e-33 132
MS.gene93078.t1 MTR_7g105000 52.436 349 156 5 1 348 1 340 7.42e-68 221
MS.gene93078.t1 MTR_2g024350 44.934 227 64 2 321 486 1 227 1.18e-54 183
MS.gene93078.t1 MTR_2g033110 56.069 173 69 4 1 170 1 169 3.48e-35 130
MS.gene93078.t1 MTR_7g104980 58.000 100 42 0 349 448 18 117 1.08e-29 115
MS.gene93078.t1 MTR_1g099600 53.535 99 44 2 305 403 163 259 3.24e-29 117
MS.gene93078.t1 MTR_8g028565 46.939 98 49 2 305 402 134 228 3.40e-24 103
MS.gene93078.t1 MTR_7g079040 47.917 96 49 1 307 402 133 227 5.19e-24 102
MS.gene93078.t1 MTR_2g032030 45.133 113 50 3 308 410 238 348 4.53e-22 98.6
MS.gene93078.t1 MTR_2g032030 45.133 113 50 3 308 410 238 348 1.14e-21 98.2
MS.gene93078.t1 MTR_8g098945 56.944 72 30 1 329 400 130 200 3.32e-21 93.6
MS.gene93078.t1 MTR_4g094908 51.471 68 33 0 329 396 267 334 2.16e-19 89.7
MS.gene93078.t1 MTR_5g016610 51.471 68 33 0 329 396 200 267 4.23e-19 87.4
MS.gene93078.t1 MTR_4g127040 56.716 67 28 1 324 390 242 307 8.48e-19 87.4
MS.gene93078.t1 MTR_8g087000 31.013 158 84 3 326 470 75 220 1.08e-18 85.9
MS.gene93078.t1 MTR_2g083870 56.061 66 29 0 323 388 75 140 1.41e-18 85.9
MS.gene93078.t1 MTR_8g087000 31.013 158 84 3 326 470 74 219 1.51e-18 85.5
MS.gene93078.t1 MTR_3g108960 43.158 95 53 1 300 393 285 379 1.95e-18 87.8
MS.gene93078.t1 MTR_1g070455 57.627 59 25 0 329 387 294 352 7.48e-18 85.5
MS.gene93078.t1 MTR_7g109600 55.000 60 27 0 329 388 54 113 1.32e-17 83.2
MS.gene93078.t1 MTR_2g016770 53.968 63 29 0 326 388 33 95 1.81e-17 81.6
MS.gene93078.t1 MTR_2g016770 53.968 63 29 0 326 388 25 87 1.82e-17 81.3
MS.gene93078.t1 MTR_1g009613 47.826 69 36 0 329 397 263 331 2.34e-17 83.6
MS.gene93078.t1 MTR_0117s0040 54.098 61 28 0 329 389 75 135 4.53e-16 78.2
MS.gene93078.t1 MTR_7g011820 43.373 83 45 2 328 410 410 490 2.33e-15 79.0
MS.gene93078.t1 MTR_7g011820 49.275 69 33 2 324 392 224 290 2.41e-15 79.0
MS.gene93078.t1 MTR_7g100510 42.574 101 43 4 305 391 324 423 3.02e-15 78.2
MS.gene93078.t1 MTR_7g100510 55.385 65 27 2 324 388 185 247 3.07e-15 78.2
MS.gene93078.t1 MTR_7g071120 51.220 82 35 3 311 392 152 228 7.40e-15 77.4
MS.gene93078.t1 MTR_7g071120 39.189 74 44 1 328 401 324 396 1.37e-11 67.0
MS.gene93078.t1 MTR_3g009470 49.315 73 35 2 326 398 278 348 8.91e-15 77.4
MS.gene93078.t1 MTR_3g009470 43.478 69 38 1 328 396 495 562 1.71e-13 73.6
MS.gene93078.t1 MTR_3g009470 49.315 73 35 2 326 398 278 348 1.26e-14 76.6
MS.gene93078.t1 MTR_7g080020 39.048 105 49 3 328 432 493 582 1.31e-14 77.0
MS.gene93078.t1 MTR_7g080020 43.902 82 44 2 318 399 270 349 4.47e-14 75.5
MS.gene93078.t1 MTR_4g082580 43.750 80 44 1 328 407 278 356 1.87e-14 75.5
MS.gene93078.t1 MTR_4g082580 41.176 68 39 1 321 388 138 204 8.34e-11 63.9
MS.gene93078.t1 MTR_5g042920 46.269 67 35 1 328 394 320 385 2.28e-14 75.5
MS.gene93078.t1 MTR_5g042920 35.971 139 75 6 324 459 147 274 8.65e-14 73.6
MS.gene93078.t1 MTR_1g086790 44.286 70 38 1 328 397 158 226 3.52e-14 73.9
MS.gene93078.t1 MTR_7g109800 38.542 96 57 2 301 396 119 212 7.23e-14 72.4
MS.gene93078.t1 MTR_8g099350 41.379 87 45 2 303 383 103 189 7.65e-14 73.2
MS.gene93078.t1 MTR_4g130900 37.037 108 55 3 293 388 312 418 8.04e-14 73.9
MS.gene93078.t1 MTR_4g013260 52.174 69 31 2 321 388 176 243 1.52e-13 73.2
MS.gene93078.t1 MTR_4g013260 44.262 61 33 1 328 388 336 395 1.93e-12 69.7
MS.gene93078.t1 MTR_5g091390 50.000 62 30 1 328 389 157 217 1.61e-13 71.6
MS.gene93078.t1 MTR_4g094588 49.180 61 30 1 328 388 178 237 2.07e-13 71.6
MS.gene93078.t1 MTR_7g080000 47.619 63 32 1 328 390 432 493 2.84e-13 72.8
MS.gene93078.t1 MTR_7g080000 39.024 82 48 2 318 399 224 303 8.31e-12 68.2
MS.gene93078.t1 MTR_3g031220 50.000 66 31 2 327 392 197 260 4.80e-13 70.9
MS.gene93078.t1 MTR_3g031220 50.000 66 31 2 327 392 197 260 5.02e-13 71.6
MS.gene93078.t1 MTR_3g031220 43.548 62 34 1 328 389 365 425 3.43e-11 65.9
MS.gene93078.t1 MTR_4g052030 54.545 55 13 1 331 385 8 50 5.27e-13 63.9
MS.gene93078.t1 MTR_3g056100 41.791 67 38 1 328 394 402 467 5.44e-13 71.6
MS.gene93078.t1 MTR_3g056100 48.529 68 33 2 321 388 236 301 1.34e-12 70.5
MS.gene93078.t1 MTR_3g056100 41.791 67 38 1 328 394 415 480 5.84e-13 71.6
MS.gene93078.t1 MTR_3g056100 48.529 68 33 2 321 388 236 301 1.37e-12 70.5
MS.gene93078.t1 MTR_5g094430 41.791 67 38 1 328 394 364 429 6.11e-13 71.2
MS.gene93078.t1 MTR_5g094430 48.438 64 31 2 325 388 197 258 4.96e-12 68.6
MS.gene93078.t1 MTR_3g095040 45.161 62 33 1 328 389 118 178 7.76e-13 67.8
MS.gene93078.t1 MTR_3g056100 41.791 67 38 1 328 394 258 323 8.26e-13 70.5
MS.gene93078.t1 MTR_3g056100 48.529 68 33 2 321 388 92 157 1.98e-12 69.3
MS.gene93078.t1 MTR_3g056100 41.791 67 38 1 328 394 271 336 9.34e-13 70.5
MS.gene93078.t1 MTR_3g056100 48.529 68 33 2 321 388 92 157 2.13e-12 69.3
MS.gene93078.t1 MTR_4g122530 38.571 70 42 1 328 397 208 276 1.06e-12 70.1
MS.gene93078.t1 MTR_5g094430 41.791 67 38 1 328 394 230 295 1.11e-12 70.1
MS.gene93078.t1 MTR_5g094430 48.438 64 31 2 325 388 63 124 7.86e-12 67.4
MS.gene93078.t1 MTR_5g094430 41.791 67 38 1 328 394 252 317 1.15e-12 70.1
MS.gene93078.t1 MTR_5g094430 48.438 64 31 2 325 388 85 146 7.24e-12 67.8
MS.gene93078.t1 MTR_2g033820 44.615 65 35 1 328 392 203 266 1.40e-12 69.7
MS.gene93078.t1 MTR_5g074400 53.226 62 27 2 327 388 242 301 1.75e-12 70.1
MS.gene93078.t1 MTR_5g074400 44.444 63 34 1 328 390 420 481 1.92e-12 69.7
MS.gene93078.t1 MTR_8g092010 43.939 66 36 1 323 388 103 167 2.02e-12 66.2
MS.gene93078.t1 MTR_7g062220 33.099 142 88 4 250 385 40 180 3.04e-12 67.8
MS.gene93078.t1 MTR_5g043880 40.230 87 50 2 299 385 96 180 3.06e-12 67.4
MS.gene93078.t1 MTR_2g045360 41.667 60 35 0 329 388 212 271 3.30e-12 68.6
MS.gene93078.t1 MTR_3g106060 41.772 79 43 1 328 406 138 213 3.62e-12 67.4
MS.gene93078.t1 MTR_5g067680 48.333 60 29 1 326 383 200 259 3.63e-12 68.2
MS.gene93078.t1 MTR_3g090860 37.209 86 45 3 306 383 106 190 5.80e-12 67.4
MS.gene93078.t1 MTR_3g053330 33.708 89 47 1 300 388 235 311 6.77e-12 67.8
MS.gene93078.t1 MTR_4g007060 41.026 78 45 1 328 404 128 205 7.77e-12 66.2
MS.gene93078.t1 MTR_4g007060 41.026 78 45 1 328 404 162 239 1.06e-11 66.2
MS.gene93078.t1 MTR_4g132430 30.435 115 65 3 276 388 86 187 2.85e-11 65.5
MS.gene93078.t1 MTR_2g105060 41.935 62 36 0 328 389 94 155 3.07e-11 63.9
MS.gene93078.t1 MTR_1g077780 44.776 67 36 1 328 394 62 127 4.05e-11 61.6
MS.gene93078.t1 MTR_5g097490 46.667 60 31 1 329 388 253 311 5.65e-11 64.7
MS.gene93078.t1 MTR_4g132430 30.435 115 65 3 276 388 220 321 5.78e-11 65.1
MS.gene93078.t1 MTR_2g105060 41.935 62 36 0 328 389 169 230 6.10e-11 63.9
MS.gene93078.t1 MTR_7g110720 40.000 60 36 0 329 388 190 249 9.76e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene93078.t1 AT5G52830 53.535 99 44 2 305 403 143 239 2.29e-28 115
MS.gene93078.t1 AT4G01250 37.931 145 79 5 260 402 66 201 2.88e-25 105
MS.gene93078.t1 AT4G23550 47.872 94 48 1 312 405 124 216 1.79e-22 98.2
MS.gene93078.t1 AT5G45050 51.613 93 43 2 305 397 1019 1109 1.85e-21 99.0
MS.gene93078.t1 AT5G45050 51.613 93 43 2 305 397 1158 1248 2.11e-21 98.6
MS.gene93078.t1 AT5G45050 51.613 93 43 2 305 397 1130 1220 2.32e-21 98.6
MS.gene93078.t1 AT2G34830 56.522 69 29 1 329 397 216 283 8.48e-20 92.0
MS.gene93078.t1 AT1G30650 56.522 69 29 1 329 397 218 285 8.67e-20 92.0
MS.gene93078.t1 AT2G34830 56.522 69 29 1 329 397 225 292 8.87e-20 92.0
MS.gene93078.t1 AT4G31550 52.308 65 31 0 329 393 247 311 2.87e-19 89.0
MS.gene93078.t1 AT4G31550 52.308 65 31 0 329 393 246 310 3.00e-19 89.0
MS.gene93078.t1 AT2G23320 56.140 57 25 0 329 385 241 297 1.81e-18 86.7
MS.gene93078.t1 AT2G24570 49.231 65 33 0 329 393 244 308 2.83e-18 86.3
MS.gene93078.t1 AT5G28650 51.515 66 32 0 329 394 263 328 4.42e-18 85.9
MS.gene93078.t1 AT1G29280 44.086 93 49 1 299 388 42 134 4.61e-18 84.3
MS.gene93078.t1 AT3G04670 51.515 66 32 0 329 394 263 328 5.90e-18 85.5
MS.gene93078.t1 AT4G24240 48.810 84 38 2 306 385 256 338 8.17e-18 85.1
MS.gene93078.t1 AT3G58710 51.471 68 33 0 326 393 68 135 9.18e-18 83.6
MS.gene93078.t1 AT3G58710 51.471 68 33 0 326 393 69 136 9.33e-18 83.6
MS.gene93078.t1 AT3G01080 47.436 78 36 3 324 401 201 273 3.46e-17 82.8
MS.gene93078.t1 AT3G01080 47.436 78 36 3 324 401 201 273 1.15e-16 82.8
MS.gene93078.t1 AT3G01080 47.541 61 31 1 328 388 344 403 2.63e-14 75.5
MS.gene93078.t1 AT3G01080 47.436 78 36 3 324 401 163 235 1.22e-16 82.4
MS.gene93078.t1 AT3G01080 47.541 61 31 1 328 388 306 365 3.33e-14 75.1
MS.gene93078.t1 AT2G30590 54.237 59 27 0 329 387 314 372 4.16e-16 80.5
MS.gene93078.t1 AT2G38470 50.000 80 36 3 309 388 167 242 5.39e-15 77.8
MS.gene93078.t1 AT2G38470 42.466 73 40 2 328 400 362 432 9.47e-13 70.9
MS.gene93078.t1 AT2G47260 37.391 115 66 3 301 411 148 260 5.62e-15 76.6
MS.gene93078.t1 AT2G03340 47.761 67 34 1 328 394 415 480 6.12e-15 77.8
MS.gene93078.t1 AT2G03340 48.571 70 34 2 324 393 246 313 7.94e-14 73.9
MS.gene93078.t1 AT3G62340 40.476 84 48 2 328 411 118 199 1.19e-14 74.7
MS.gene93078.t1 AT4G30935 35.780 109 57 3 292 388 283 390 2.90e-14 75.5
MS.gene93078.t1 AT2G21900 39.362 94 52 2 301 390 78 170 3.58e-14 71.6
MS.gene93078.t1 AT1G13960 40.816 98 48 4 309 401 205 297 5.07e-14 74.7
MS.gene93078.t1 AT1G13960 47.541 61 31 1 328 388 409 468 1.80e-13 73.2
MS.gene93078.t1 AT4G26440 45.946 74 38 2 326 399 176 247 5.49e-14 74.7
MS.gene93078.t1 AT4G26440 41.667 72 41 1 328 399 372 442 9.20e-12 67.8
MS.gene93078.t1 AT5G56270 34.194 155 78 5 326 458 271 423 5.56e-14 75.1
MS.gene93078.t1 AT5G56270 44.444 63 34 1 328 390 487 548 8.98e-13 71.2
MS.gene93078.t1 AT1G13960 47.436 78 36 3 324 401 72 144 1.08e-13 72.8
MS.gene93078.t1 AT1G13960 47.541 61 31 1 328 388 256 315 3.01e-13 71.6
MS.gene93078.t1 AT1G64000 38.095 84 48 3 303 385 90 170 1.70e-13 69.7
MS.gene93078.t1 AT2G30250 50.000 60 29 1 329 388 329 387 1.90e-13 72.4
MS.gene93078.t1 AT2G30250 48.387 62 30 2 327 388 165 224 1.02e-11 67.0
MS.gene93078.t1 AT5G43290 55.172 58 25 1 328 385 114 170 2.36e-13 70.9
MS.gene93078.t1 AT5G41570 40.000 85 48 3 303 385 71 154 5.31e-13 67.8
MS.gene93078.t1 AT5G07100 35.455 110 64 3 327 430 116 224 5.33e-13 70.1
MS.gene93078.t1 AT5G07100 40.580 69 40 1 328 396 234 301 2.40e-12 68.2
MS.gene93078.t1 AT2G37260 38.095 84 48 2 305 385 323 405 1.01e-12 70.5
MS.gene93078.t1 AT2G37260 49.254 67 32 2 324 390 161 225 4.84e-12 68.2
MS.gene93078.t1 AT2G04880 48.333 60 30 1 329 388 308 366 1.19e-12 70.5
MS.gene93078.t1 AT2G04880 48.333 60 30 1 329 388 284 342 1.29e-12 70.1
MS.gene93078.t1 AT1G80840 43.548 62 35 0 328 389 146 207 1.31e-12 68.9
MS.gene93078.t1 AT1G69310 39.773 88 51 2 299 386 119 204 1.33e-12 68.6
MS.gene93078.t1 AT1G69310 39.773 88 51 2 299 386 119 204 1.33e-12 68.6
MS.gene93078.t1 AT1G69310 39.773 88 51 2 299 386 119 204 1.33e-12 68.6
MS.gene93078.t1 AT2G40740 37.931 87 49 2 302 383 144 230 1.46e-12 68.6
MS.gene93078.t1 AT2G37260 38.095 84 48 2 305 385 243 325 1.58e-12 69.3
MS.gene93078.t1 AT2G37260 49.254 67 32 2 324 390 81 145 7.94e-12 67.0
MS.gene93078.t1 AT1G29860 43.478 69 38 1 328 396 136 203 1.61e-12 68.6
MS.gene93078.t1 AT1G55600 46.970 66 33 2 323 388 303 366 1.81e-12 69.7
MS.gene93078.t1 AT2G37260 38.095 84 48 2 305 385 241 323 1.82e-12 68.9
MS.gene93078.t1 AT2G37260 49.254 67 32 2 324 390 79 143 9.22e-12 67.0
MS.gene93078.t1 AT2G40740 37.931 87 49 2 302 383 153 239 1.86e-12 68.6
MS.gene93078.t1 AT5G07100 35.455 110 64 3 327 430 23 131 2.28e-12 66.6
MS.gene93078.t1 AT5G07100 40.580 69 40 1 328 396 141 208 7.64e-12 65.1
MS.gene93078.t1 AT5G07100 35.455 110 64 3 327 430 23 131 2.28e-12 66.6
MS.gene93078.t1 AT5G07100 40.580 69 40 1 328 396 141 208 7.64e-12 65.1
MS.gene93078.t1 AT5G07100 35.455 110 64 3 327 430 23 131 2.28e-12 66.6
MS.gene93078.t1 AT5G07100 40.580 69 40 1 328 396 141 208 7.64e-12 65.1
MS.gene93078.t1 AT5G07100 35.455 110 64 3 327 430 23 131 2.28e-12 66.6
MS.gene93078.t1 AT5G07100 40.580 69 40 1 328 396 141 208 7.64e-12 65.1
MS.gene93078.t1 AT5G26170 47.619 63 32 1 323 385 108 169 2.54e-12 65.9
MS.gene93078.t1 AT4G18170 41.026 78 44 2 308 385 153 228 2.60e-12 68.2
MS.gene93078.t1 AT4G26640 38.462 104 57 5 327 427 170 269 4.30e-12 68.6
MS.gene93078.t1 AT4G26640 40.984 61 35 1 328 388 341 400 1.68e-11 67.0
MS.gene93078.t1 AT4G26640 38.462 104 57 5 327 427 210 309 4.44e-12 68.9
MS.gene93078.t1 AT4G26640 40.984 61 35 1 328 388 381 440 1.66e-11 67.0
MS.gene93078.t1 AT5G45260 41.026 78 43 2 329 404 1209 1285 5.42e-12 68.9
MS.gene93078.t1 AT4G26640 38.462 104 57 5 327 427 138 237 5.92e-12 68.2
MS.gene93078.t1 AT4G26640 40.984 61 35 1 328 388 309 368 2.00e-11 66.6
MS.gene93078.t1 AT5G49520 44.828 58 31 1 328 385 221 277 6.80e-12 67.8
MS.gene93078.t1 AT4G26640 38.462 104 57 5 327 427 34 133 8.35e-12 67.4
MS.gene93078.t1 AT4G26640 40.984 61 35 1 328 388 205 264 2.05e-11 65.9
MS.gene93078.t1 AT4G26640 38.462 104 57 5 327 427 34 133 8.35e-12 67.4
MS.gene93078.t1 AT4G26640 40.984 61 35 1 328 388 205 264 2.05e-11 65.9
MS.gene93078.t1 AT4G26640 38.462 104 57 5 327 427 34 133 8.35e-12 67.4
MS.gene93078.t1 AT4G26640 40.984 61 35 1 328 388 205 264 2.05e-11 65.9
MS.gene93078.t1 AT4G26640 38.462 104 57 5 327 427 34 133 8.35e-12 67.4
MS.gene93078.t1 AT4G26640 40.984 61 35 1 328 388 205 264 2.05e-11 65.9
MS.gene93078.t1 AT2G46400 43.182 88 45 3 301 383 74 161 1.15e-11 65.9
MS.gene93078.t1 AT5G46350 45.902 61 32 1 328 388 183 242 1.34e-11 66.2
MS.gene93078.t1 AT2G44745 34.694 98 62 2 289 385 105 201 2.21e-11 63.9
MS.gene93078.t1 AT4G12020 32.800 125 74 5 295 413 430 550 5.36e-11 65.9
MS.gene93078.t1 AT4G12020 32.800 125 74 5 295 413 430 550 5.36e-11 65.9
MS.gene93078.t1 AT4G22070 40.000 60 36 0 329 388 298 357 8.85e-11 64.7
MS.gene93078.t1 AT4G22070 40.000 60 36 0 329 388 298 357 8.85e-11 64.7
MS.gene93078.t1 AT4G22070 40.000 60 36 0 329 388 298 357 8.85e-11 64.7
MS.gene93078.t1 AT4G22070 40.000 60 36 0 329 388 298 357 8.85e-11 64.7

Find 135 sgRNAs with CRISPR-Local

Find 208 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCGGCTTAAGTGGGGTAAT+TGG 0.193333 8.2:+32950236 None:intergenic
ACTACAAATGTAGAAGTTTC+TGG 0.203501 8.2:-32948270 MS.gene93078:CDS
AGTCTTTGATGACTTGTTTC+GGG 0.228480 8.2:+32948123 None:intergenic
GGTAGTGATGGTTGGGATAC+TGG 0.266171 8.2:+32950142 None:intergenic
GGAAGGGATGGTGGTGCTTG+AGG 0.267804 8.2:+32950097 None:intergenic
TCGGCTTAAGTGGGGTAATT+GGG 0.268846 8.2:+32950237 None:intergenic
GAAGGGATGGTGGTGCTTGA+GGG 0.285161 8.2:+32950098 None:intergenic
TGGATGTGGAGACCCTTTAA+TGG 0.287579 8.2:+32949321 None:intergenic
TGGAGGTGGAGTTTCAAAAT+TGG 0.294278 8.2:+32950355 None:intergenic
TTGAGGGGATATGATGTTAT+TGG 0.296773 8.2:+32950316 None:intergenic
AACGGCAACATCGCCATATT+AGG 0.297130 8.2:+32948043 None:intergenic
TGCGATTTCACTGCGGGCAT+GGG 0.316131 8.2:+32949680 None:intergenic
TAGTGAAGATGGTGGTAGTG+GGG 0.325049 8.2:+32949886 None:intergenic
AAACTTGGAATCGCCTAATA+TGG 0.330985 8.2:-32948056 MS.gene93078:CDS
AGGGTGGCGAATGTGGTTGT+AGG 0.331360 8.2:+32949861 None:intergenic
CTCCAATGGACAATGATGAT+TGG 0.334060 8.2:-32950433 None:intergenic
CAAAATTTAAATCAAGAAAA+AGG 0.335426 8.2:-32949524 MS.gene93078:intron
TAGTCTTTGATGACTTGTTT+CGG 0.341304 8.2:+32948122 None:intergenic
GTAGTGATGGTAGGTATGAT+AGG 0.345611 8.2:+32949825 None:intergenic
GTAGTTGATTGCGCTTTCTC+AGG 0.345960 8.2:+32949604 None:intergenic
ACTTATGTTGTGACATATAA+AGG 0.361618 8.2:-32948199 MS.gene93078:CDS
GGATATGATGTTATTGGTTG+TGG 0.366736 8.2:+32950322 None:intergenic
TTGCGATTTCACTGCGGGCA+TGG 0.375796 8.2:+32949679 None:intergenic
TACACTTCATTGTTACGGTT+TGG 0.377794 8.2:+32949714 None:intergenic
AGTTCTTACCGATACGTCTA+TGG 0.380944 8.2:-32947993 MS.gene93078:CDS
ATGAAATCATTCGGCTTAAG+TGG 0.384871 8.2:+32950227 None:intergenic
AGGGATGGTGGTGCTTGAGG+GGG 0.385352 8.2:+32950100 None:intergenic
GGATGTGGAGACCCTTTAAT+GGG 0.385486 8.2:+32949322 None:intergenic
GTTGGGGTGGTAGTGATGGT+TGG 0.392907 8.2:+32950134 None:intergenic
GTTGTGGTGGTTAGAGTTGG+AGG 0.394427 8.2:+32950338 None:intergenic
GGTAGTGAAGATGGTGGTAG+TGG 0.395152 8.2:+32949884 None:intergenic
TTTGTTCGAGGTAGTAGAAA+TGG 0.396886 8.2:+32949582 None:intergenic
AAGGGATGGTGGTGCTTGAG+GGG 0.398824 8.2:+32950099 None:intergenic
AAACATGACACCTATGTTAG+AGG 0.407154 8.2:-32947930 MS.gene93078:CDS
AGGGGTTGTTGTGGAATTGA+TGG 0.409578 8.2:+32949624 None:intergenic
AGAGGTGGGGATAGTGGTGT+TGG 0.411378 8.2:+32949926 None:intergenic
TCCAATGGACAATGATGATT+GGG 0.413894 8.2:-32950432 None:intergenic
TTGGTTGTGGTGGTTAGAGT+TGG 0.415176 8.2:+32950335 None:intergenic
CGCTTTCTCAGGGGTTGTTG+TGG 0.415304 8.2:+32949615 None:intergenic
GTTGGGATACTGGTGATAGT+AGG 0.415858 8.2:+32950152 None:intergenic
TTGGGGTGGTAGTGATGGTT+GGG 0.421087 8.2:+32950135 None:intergenic
CTACAAATGTAGAAGTTTCT+GGG 0.423709 8.2:-32948269 MS.gene93078:CDS
TAGAAGTTTCTGGGATTGTT+CGG 0.428728 8.2:-32948260 MS.gene93078:CDS
GGGTGGCGAATGTGGTTGTA+GGG 0.432234 8.2:+32949862 None:intergenic
GATGGTAGAGGTGGGGATAG+TGG 0.437887 8.2:+32949920 None:intergenic
TCAAGCTCTATGAAATCATT+CGG 0.442212 8.2:+32950218 None:intergenic
GGTAATGTGGGAAGGGATGG+TGG 0.443946 8.2:+32950088 None:intergenic
GATAGTAGGGGTGGGGATAG+TGG 0.445675 8.2:+32950166 None:intergenic
AGTGGTTGGGGTGGTAGTGA+TGG 0.446309 8.2:+32950130 None:intergenic
ACTTGAGCCTCGTTGCTCTC+TGG 0.448771 8.2:+32948013 None:intergenic
ACGAGCCTTCAGAAGATTCA+TGG 0.450159 8.2:-32949369 MS.gene93078:CDS
TATGTTAGAGGATCTCTTGA+TGG 0.450163 8.2:-32947918 MS.gene93078:CDS
TTGGGATACTGGTGATAGTA+GGG 0.453252 8.2:+32950153 None:intergenic
GAGGTGGGGATAGTGGTGTT+GGG 0.454610 8.2:+32949927 None:intergenic
AAACATACACTTCATTGTTA+CGG 0.454894 8.2:+32949709 None:intergenic
GGGGTGGGGATAGTGGTTGT+TGG 0.455018 8.2:+32950173 None:intergenic
TAGTGATGGTAGGTATGATA+GGG 0.457142 8.2:+32949826 None:intergenic
TGGGGCTGAGTTATTCTCCT+TGG 0.469030 8.2:+32950256 None:intergenic
TTAATCAGAACTCTGTTGTT+GGG 0.469555 8.2:-32948150 MS.gene93078:CDS
AGGGGTAGTGGTGGTGAGGG+TGG 0.470018 8.2:+32949845 None:intergenic
AGTGAAGATGGTGGTAGTGG+GGG 0.472105 8.2:+32949887 None:intergenic
GTTAATCAGAACTCTGTTGT+TGG 0.473025 8.2:-32948151 MS.gene93078:CDS
GGTGGTGAGGGTGGCGAATG+TGG 0.473258 8.2:+32949854 None:intergenic
TTATGCATTGGCAAAGAAGC+TGG 0.473516 8.2:-32948097 MS.gene93078:CDS
GTAGTGAAGATGGTGGTAGT+GGG 0.473726 8.2:+32949885 None:intergenic
GGTGGTAATGTGGGAAGGGA+TGG 0.475750 8.2:+32950085 None:intergenic
TGATAGGGGTAGTGGTGGTG+AGG 0.478349 8.2:+32949841 None:intergenic
TAGTTGATTGCGCTTTCTCA+GGG 0.481392 8.2:+32949605 None:intergenic
TTGCGCAAATGTCAGAAACT+TGG 0.482429 8.2:-32948071 MS.gene93078:CDS
TATGATGTTATTGGTTGTGG+TGG 0.483931 8.2:+32950325 None:intergenic
TCTAACATAGGTGTCATGTT+TGG 0.484082 8.2:+32947932 None:intergenic
GTTGGTTGCGATTTCACTGC+GGG 0.486497 8.2:+32949674 None:intergenic
TCATCAAAGCATGGAAGTGT+AGG 0.486908 8.2:+32950290 None:intergenic
GTTGTTGTTCGATGAGTGTT+GGG 0.487764 8.2:+32950003 None:intergenic
GGTTGTAGGGGTAGTGAAGA+TGG 0.488717 8.2:+32949875 None:intergenic
TACTGGTGATAGTAGGGGTG+GGG 0.488721 8.2:+32950159 None:intergenic
GGTAGGAGTAGTGGTTGGGG+TGG 0.493221 8.2:+32950121 None:intergenic
ATAGAGCACCACTATTGATC+TGG 0.499970 8.2:+32947888 None:intergenic
GTGGTGGTTAGAGTTGGAGG+TGG 0.500554 8.2:+32950341 None:intergenic
ACAGAGTTCTGATTAACTGC+TGG 0.506512 8.2:+32948157 None:intergenic
GATACTGGTGATAGTAGGGG+TGG 0.507596 8.2:+32950157 None:intergenic
TTGCTCTCTGGCTGATCTAA+CGG 0.509856 8.2:+32948025 None:intergenic
GGTGGTAGGAGTAGCAAAAG+TGG 0.510553 8.2:+32950376 None:intergenic
TGTTGTTGTTCGATGAGTGT+TGG 0.514177 8.2:+32950002 None:intergenic
GTTGTTGTGGAATTGATGGA+TGG 0.514803 8.2:+32949628 None:intergenic
TGATGGTATTGGTGGTAATG+TGG 0.520234 8.2:+32950075 None:intergenic
CGGCTTAAGTGGGGTAATTG+GGG 0.520319 8.2:+32950238 None:intergenic
GATAGGGGTAGTGGTGGTGA+GGG 0.522610 8.2:+32949842 None:intergenic
AGGTGGAGTTTCAAAATTGG+TGG 0.528008 8.2:+32950358 None:intergenic
GGTGTGAGCAGTGATGGTAG+AGG 0.528684 8.2:+32949908 None:intergenic
GTGAGCAGTGATGGTAGAGG+TGG 0.533809 8.2:+32949911 None:intergenic
TGTTGGGAAATTAGAAAAGG+TGG 0.536200 8.2:+32950019 None:intergenic
ATCAAGAGATCCTCTAACAT+AGG 0.542974 8.2:+32947920 None:intergenic
TGAGCAGTGATGGTAGAGGT+GGG 0.544379 8.2:+32949912 None:intergenic
ATTAGTCGTTGTAGTAGTGA+TGG 0.545537 8.2:+32949812 None:intergenic
GGTAGGTATGATAGGGGTAG+TGG 0.546289 8.2:+32949833 None:intergenic
CATCAAAGCATGGAAGTGTA+GGG 0.546665 8.2:+32950291 None:intergenic
GCGATTTCACTGCGGGCATG+GGG 0.547693 8.2:+32949681 None:intergenic
TGAAATCATTCGGCTTAAGT+GGG 0.547986 8.2:+32950228 None:intergenic
GATGGTATTGGTGGTAATGT+GGG 0.548603 8.2:+32950076 None:intergenic
GACTTCAACCAGATCAATAG+TGG 0.548651 8.2:-32947896 MS.gene93078:CDS
TCCCAATCATCATTGTCCAT+TGG 0.550956 8.2:+32950431 None:intergenic
CATGCCCATGAATCTTCTGA+AGG 0.555237 8.2:+32949364 None:intergenic
GAGTGTTGGGAAATTAGAAA+AGG 0.562639 8.2:+32950016 None:intergenic
ACTAGTGTTAGTGATGGTAT+TGG 0.562993 8.2:+32950064 None:intergenic
GGAGTTTCAAAATTGGTGGT+AGG 0.564205 8.2:+32950362 None:intergenic
GGTGGCGAATGTGGTTGTAG+GGG 0.565157 8.2:+32949863 None:intergenic
AGGTGGGGATAGTGGTGTTG+GGG 0.565500 8.2:+32949928 None:intergenic
CGAGCCTTCAGAAGATTCAT+GGG 0.566390 8.2:-32949368 MS.gene93078:CDS
AGTGATGGTAGGTATGATAG+GGG 0.566864 8.2:+32949827 None:intergenic
CATGGCACACAAATGTCACT+TGG 0.574104 8.2:+32949401 None:intergenic
TTAAAGGGTCTCCACATCCA+AGG 0.584498 8.2:-32949318 MS.gene93078:intron
AAACTAAAATCATCAAAGCA+TGG 0.588328 8.2:+32950281 None:intergenic
TCAAAGACTAGATTATGCAT+TGG 0.588584 8.2:-32948109 MS.gene93078:CDS
ATGAAAACTAGTGTTAGTGA+TGG 0.596957 8.2:+32950058 None:intergenic
AAGGCTCGTCTTCCCTCACA+TGG 0.597848 8.2:+32949383 None:intergenic
CACAACATAAGTGTTCTCAC+TGG 0.597849 8.2:+32948210 None:intergenic
CTTCAGAAGATTCATGGGCA+TGG 0.598976 8.2:-32949363 MS.gene93078:CDS
ATACTGGTGATAGTAGGGGT+GGG 0.601151 8.2:+32950158 None:intergenic
TGCACAATCAAAACTAGTGT+TGG 0.602127 8.2:+32949656 None:intergenic
AGTGTTAGTGATGGTATTGG+TGG 0.606164 8.2:+32950067 None:intergenic
GTATTGGTGGTAATGTGGGA+AGG 0.610190 8.2:+32950080 None:intergenic
TATTGGTGGTAATGTGGGAA+GGG 0.622832 8.2:+32950081 None:intergenic
GACATTTGTGTGCCATGTGA+GGG 0.624856 8.2:-32949395 MS.gene93078:CDS
CTTTGATGACTTGTTTCGGG+AGG 0.626610 8.2:+32948126 None:intergenic
TGGGATACTGGTGATAGTAG+GGG 0.637481 8.2:+32950154 None:intergenic
GTCGTTGTAGTAGTGATGGT+AGG 0.641331 8.2:+32949816 None:intergenic
TGACATTTGTGTGCCATGTG+AGG 0.643817 8.2:-32949396 MS.gene93078:CDS
AGGTATGATAGGGGTAGTGG+TGG 0.649146 8.2:+32949836 None:intergenic
GAAATCATTCGGCTTAAGTG+GGG 0.658767 8.2:+32950229 None:intergenic
AGTTGATTGCGCTTTCTCAG+GGG 0.662828 8.2:+32949606 None:intergenic
TGTTGGTTGCGATTTCACTG+CGG 0.685999 8.2:+32949673 None:intergenic
TGTAGGGGTAGTGAAGATGG+TGG 0.689397 8.2:+32949878 None:intergenic
GAGCAGTGATGGTAGAGGTG+GGG 0.706368 8.2:+32949913 None:intergenic
AGATCAGCCAGAGAGCAACG+AGG 0.772309 8.2:-32948020 MS.gene93078:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAATATAATAAATAAT+AGG + chr8.2:32948823-32948842 None:intergenic 0.0%
!! AAATTTATTTATAGTGAAAT+TGG - chr8.2:32949525-32949544 MS.gene93078:CDS 10.0%
!! TATTAAAATAAGGATTAAAA+TGG + chr8.2:32949563-32949582 None:intergenic 10.0%
!!! GATTTTATTCTATTAAAATA+AGG + chr8.2:32949573-32949592 None:intergenic 10.0%
!! CAAAATTTAAATCAAGAAAA+AGG - chr8.2:32948784-32948803 MS.gene93078:intron 15.0%
!!! CTTTTTCTTGATTTAAATTT+TGG + chr8.2:32948786-32948805 None:intergenic 15.0%
!!! GATTTAAATTTTGGTTTTTT+CGG + chr8.2:32948777-32948796 None:intergenic 15.0%
!!! TTCACTATAAATAAATTTTG+CGG + chr8.2:32949523-32949542 None:intergenic 15.0%
!! ATCAAAATAGTATGATTTAG+CGG - chr8.2:32949972-32949991 MS.gene93078:CDS 20.0%
!! ATGAAATGTATAATGACTTT+AGG + chr8.2:32948865-32948884 None:intergenic 20.0%
!! TAAATAAAGTGAAAGTTCTT+AGG + chr8.2:32949813-32949832 None:intergenic 20.0%
!! TGTATACATTTATATGTGTA+TGG - chr8.2:32949941-32949960 MS.gene93078:CDS 20.0%
!!! AAATATACCACTTTTTCTTT+TGG + chr8.2:32949669-32949688 None:intergenic 20.0%
!!! ATATCAATGAATGATTTTGT+AGG - chr8.2:32950011-32950030 MS.gene93078:CDS 20.0%
! AAAAGAGAGGATATATTTGT+AGG - chr8.2:32949713-32949732 MS.gene93078:CDS 25.0%
! AAACATACACTTCATTGTTA+CGG + chr8.2:32948602-32948621 None:intergenic 25.0%
! AAACTAAAATCATCAAAGCA+TGG + chr8.2:32948030-32948049 None:intergenic 25.0%
! AAAGAGAGGATATATTTGTA+GGG - chr8.2:32949714-32949733 MS.gene93078:CDS 25.0%
! ACTTATGTTGTGACATATAA+AGG - chr8.2:32950109-32950128 MS.gene93078:CDS 25.0%
! AGGATTAAAATGGATATTGA+AGG + chr8.2:32949553-32949572 None:intergenic 25.0%
! ATAAAGACCAAAAGAAAAAG+TGG - chr8.2:32949659-32949678 MS.gene93078:CDS 25.0%
! ATGTAACAAAATTCATCCAA+TGG + chr8.2:32949144-32949163 None:intergenic 25.0%
! CTAATATGAATAAAGTTTGC+AGG - chr8.2:32949622-32949641 MS.gene93078:CDS 25.0%
! GGATTAAAATGGATATTGAA+GGG + chr8.2:32949552-32949571 None:intergenic 25.0%
! TGTTTAATGCATAAAAACCT+TGG + chr8.2:32949010-32949029 None:intergenic 25.0%
! TTAACTACAATTCTTTCCAA+TGG + chr8.2:32949222-32949241 None:intergenic 25.0%
!! AAAAATCTAGAATTTGTTCG+AGG + chr8.2:32948741-32948760 None:intergenic 25.0%
!! CACTATTTAAAACTCTAGTT+GGG + chr8.2:32949177-32949196 None:intergenic 25.0%
!! TACATGAGAGTTTTACATAA+AGG + chr8.2:32949925-32949944 None:intergenic 25.0%
!! TCACTATTTAAAACTCTAGT+TGG + chr8.2:32949178-32949197 None:intergenic 25.0%
!!! ATGTACTGTTAATTGCTTTT+TGG - chr8.2:32949384-32949403 MS.gene93078:CDS 25.0%
!!! CTAGAGTTTTAAATAGTGAT+CGG - chr8.2:32949179-32949198 MS.gene93078:intron 25.0%
!!! TGATGATTTTAGTTTTACCA+AGG - chr8.2:32948035-32948054 MS.gene93078:CDS 25.0%
AAGGAAGAAAAAGAAAAGAG+AGG - chr8.2:32949700-32949719 MS.gene93078:CDS 30.0%
ACAAAATTCATCCAATGGTA+AGG + chr8.2:32949139-32949158 None:intergenic 30.0%
ACAATTACACCTTTGATCTT+TGG - chr8.2:32949475-32949494 MS.gene93078:intron 30.0%
ACTACAAATGTAGAAGTTTC+TGG - chr8.2:32950038-32950057 MS.gene93078:CDS 30.0%
ATATGTTACTCAGTGTAAGA+CGG - chr8.2:32949885-32949904 MS.gene93078:CDS 30.0%
ATGAAAACTAGTGTTAGTGA+TGG + chr8.2:32948253-32948272 None:intergenic 30.0%
ATGGAGAAAAACCCATTAAA+GGG - chr8.2:32948975-32948994 MS.gene93078:intron 30.0%
CAAAAAATGTTACATCTGCA+TGG + chr8.2:32949427-32949446 None:intergenic 30.0%
CTACAAATGTAGAAGTTTCT+GGG - chr8.2:32950039-32950058 MS.gene93078:CDS 30.0%
GAATTGATCTCTCTAATATG+TGG + chr8.2:32949603-32949622 None:intergenic 30.0%
GTTTACTGAGCTAGAAAAAA+TGG - chr8.2:32948344-32948363 MS.gene93078:intron 30.0%
TACAATTCTTTCCAATGGTA+AGG + chr8.2:32949217-32949236 None:intergenic 30.0%
TATGGAGAAAAACCCATTAA+AGG - chr8.2:32948974-32948993 MS.gene93078:intron 30.0%
TCAAAGACTAGATTATGCAT+TGG - chr8.2:32950199-32950218 MS.gene93078:CDS 30.0%
TCAAGCTCTATGAAATCATT+CGG + chr8.2:32948093-32948112 None:intergenic 30.0%
TCTTACACTGAGTAACATAT+TGG + chr8.2:32949885-32949904 None:intergenic 30.0%
TGTGTTTCCTAAAAAACAGA+GGG + chr8.2:32949458-32949477 None:intergenic 30.0%
TTAATCAGAACTCTGTTGTT+GGG - chr8.2:32950158-32950177 MS.gene93078:CDS 30.0%
TTGTGTTTCCTAAAAAACAG+AGG + chr8.2:32949459-32949478 None:intergenic 30.0%
! ATCTCTTTTCTATTGTTCGT+AGG - chr8.2:32947899-32947918 MS.gene93078:CDS 30.0%
! CACTATTTAAAACTCTAGGT+GGG + chr8.2:32949099-32949118 None:intergenic 30.0%
! TTACATAAAGGTATGCAATC+TGG + chr8.2:32949913-32949932 None:intergenic 30.0%
!! AGAAAAGGTGGAATTTTGAT+TGG + chr8.2:32948280-32948299 None:intergenic 30.0%
!! TAGTCTTTGATGACTTGTTT+CGG + chr8.2:32950189-32950208 None:intergenic 30.0%
!!! AGTTTTAAATAGTGATCGGA+AGG - chr8.2:32949183-32949202 MS.gene93078:intron 30.0%
AAACATGACACCTATGTTAG+AGG - chr8.2:32950378-32950397 MS.gene93078:CDS 35.0%
AAACTTGGAATCGCCTAATA+TGG - chr8.2:32950252-32950271 MS.gene93078:CDS 35.0%
ACTAGTGTTAGTGATGGTAT+TGG + chr8.2:32948247-32948266 None:intergenic 35.0%
ATCAAGAGATCCTCTAACAT+AGG + chr8.2:32950391-32950410 None:intergenic 35.0%
ATGAAATCATTCGGCTTAAG+TGG + chr8.2:32948084-32948103 None:intergenic 35.0%
ATGCATAAAAACCTTGGATG+TGG + chr8.2:32949004-32949023 None:intergenic 35.0%
ATTAGTCGTTGTAGTAGTGA+TGG + chr8.2:32948499-32948518 None:intergenic 35.0%
CAAAAACTCCATAGACGTAT+CGG + chr8.2:32950326-32950345 None:intergenic 35.0%
CATCAAAGACCAAAGATCAA+AGG + chr8.2:32949487-32949506 None:intergenic 35.0%
GTAGTTAAATGCAACATACG+TGG - chr8.2:32949234-32949253 MS.gene93078:intron 35.0%
GTTAATCAGAACTCTGTTGT+TGG - chr8.2:32950157-32950176 MS.gene93078:CDS 35.0%
TACACTTCATTGTTACGGTT+TGG + chr8.2:32948597-32948616 None:intergenic 35.0%
TAGTGATGGTAGGTATGATA+GGG + chr8.2:32948485-32948504 None:intergenic 35.0%
TATGTTAGAGGATCTCTTGA+TGG - chr8.2:32950390-32950409 MS.gene93078:CDS 35.0%
TCATGGGCATGGAAAAAATA+TGG - chr8.2:32948956-32948975 MS.gene93078:intron 35.0%
TGAAATCATTCGGCTTAAGT+GGG + chr8.2:32948083-32948102 None:intergenic 35.0%
TGCACAATCAAAACTAGTGT+TGG + chr8.2:32948655-32948674 None:intergenic 35.0%
TGTTGGGAAATTAGAAAAGG+TGG + chr8.2:32948292-32948311 None:intergenic 35.0%
TTGAGGGGATATGATGTTAT+TGG + chr8.2:32947995-32948014 None:intergenic 35.0%
TTTGTTCGAGGTAGTAGAAA+TGG + chr8.2:32948729-32948748 None:intergenic 35.0%
! CCACTATTTAAAACTCTAGG+TGG + chr8.2:32949100-32949119 None:intergenic 35.0%
! CGACCACTATTTAAAACTCT+AGG + chr8.2:32949103-32949122 None:intergenic 35.0%
! GATACGTCTATGGAGTTTTT+GGG - chr8.2:32950325-32950344 MS.gene93078:CDS 35.0%
! GGATATGATGTTATTGGTTG+TGG + chr8.2:32947989-32948008 None:intergenic 35.0%
! TATGATGTTATTGGTTGTGG+TGG + chr8.2:32947986-32948005 None:intergenic 35.0%
! TCTAACATAGGTGTCATGTT+TGG + chr8.2:32950379-32950398 None:intergenic 35.0%
!! AGTCTTTGATGACTTGTTTC+GGG + chr8.2:32950188-32950207 None:intergenic 35.0%
!! GAGTGTTGGGAAATTAGAAA+AGG + chr8.2:32948295-32948314 None:intergenic 35.0%
!! TAGAAGTTTCTGGGATTGTT+CGG - chr8.2:32950048-32950067 MS.gene93078:CDS 35.0%
!!! CCACCTAGAGTTTTAAATAG+TGG - chr8.2:32949097-32949116 MS.gene93078:intron 35.0%
!!! GGTTTTTTCGGATGTGTATT+TGG + chr8.2:32948765-32948784 None:intergenic 35.0%
!!! GTTTAGTCCCTCTGTTTTTT+AGG - chr8.2:32949448-32949467 MS.gene93078:intron 35.0%
AAGACCATGATCCTTACCAT+TGG - chr8.2:32949125-32949144 MS.gene93078:intron 40.0%
AGGTGGAGTTTCAAAATTGG+TGG + chr8.2:32947953-32947972 None:intergenic 40.0%
AGTGATGGTAGGTATGATAG+GGG + chr8.2:32948484-32948503 None:intergenic 40.0%
AGTTCTTACCGATACGTCTA+TGG - chr8.2:32950315-32950334 MS.gene93078:CDS 40.0%
CACAACATAAGTGTTCTCAC+TGG + chr8.2:32950101-32950120 None:intergenic 40.0%
CTTTCCAATGGTAAGGATCA+TGG + chr8.2:32949210-32949229 None:intergenic 40.0%
GAAATCATTCGGCTTAAGTG+GGG + chr8.2:32948082-32948101 None:intergenic 40.0%
GACTTCAACCAGATCAATAG+TGG - chr8.2:32950412-32950431 MS.gene93078:CDS 40.0%
GTAGTGATGGTAGGTATGAT+AGG + chr8.2:32948486-32948505 None:intergenic 40.0%
GTTGTTGTGGAATTGATGGA+TGG + chr8.2:32948683-32948702 None:intergenic 40.0%
TAGTTGATTGCGCTTTCTCA+GGG + chr8.2:32948706-32948725 None:intergenic 40.0%
TCATCCAATGGTAAGGATCA+TGG + chr8.2:32949132-32949151 None:intergenic 40.0%
TGGAGGTGGAGTTTCAAAAT+TGG + chr8.2:32947956-32947975 None:intergenic 40.0%
TTGCGCAAATGTCAGAAACT+TGG - chr8.2:32950237-32950256 MS.gene93078:CDS 40.0%
TTGGGATACTGGTGATAGTA+GGG + chr8.2:32948158-32948177 None:intergenic 40.0%
! AACATACGTGGTCTTAATCG+CGG - chr8.2:32949246-32949265 MS.gene93078:intron 40.0%
! ACAGAGTTCTGATTAACTGC+TGG + chr8.2:32950154-32950173 None:intergenic 40.0%
! AGTGTTAGTGATGGTATTGG+TGG + chr8.2:32948244-32948263 None:intergenic 40.0%
! ATAGAGCACCACTATTGATC+TGG + chr8.2:32950423-32950442 None:intergenic 40.0%
! CATCAAAGCATGGAAGTGTA+GGG + chr8.2:32948020-32948039 None:intergenic 40.0%
! CGATACGTCTATGGAGTTTT+TGG - chr8.2:32950324-32950343 MS.gene93078:CDS 40.0%
! GGAGTTTCAAAATTGGTGGT+AGG + chr8.2:32947949-32947968 None:intergenic 40.0%
! GTTGTTGTTCGATGAGTGTT+GGG + chr8.2:32948308-32948327 None:intergenic 40.0%
! TATTGGTGGTAATGTGGGAA+GGG + chr8.2:32948230-32948249 None:intergenic 40.0%
! TCATCAAAGCATGGAAGTGT+AGG + chr8.2:32948021-32948040 None:intergenic 40.0%
! TGTTGTTGTTCGATGAGTGT+TGG + chr8.2:32948309-32948328 None:intergenic 40.0%
! TTATGCATTGGCAAAGAAGC+TGG - chr8.2:32950211-32950230 MS.gene93078:CDS 40.0%
!! ATGGAAGTGTAGGGTTTTGA+GGG + chr8.2:32948011-32948030 None:intergenic 40.0%
!! GATGGTATTGGTGGTAATGT+GGG + chr8.2:32948235-32948254 None:intergenic 40.0%
!! TGATGGTATTGGTGGTAATG+TGG + chr8.2:32948236-32948255 None:intergenic 40.0%
AACGGCAACATCGCCATATT+AGG + chr8.2:32950268-32950287 None:intergenic 45.0%
ACGAGCCTTCAGAAGATTCA+TGG - chr8.2:32948939-32948958 MS.gene93078:intron 45.0%
AGGACCATGATCCTTACCAT+TGG - chr8.2:32949203-32949222 MS.gene93078:intron 45.0%
AGGGGTTGTTGTGGAATTGA+TGG + chr8.2:32948687-32948706 None:intergenic 45.0%
AGTTGATTGCGCTTTCTCAG+GGG + chr8.2:32948705-32948724 None:intergenic 45.0%
ATACTGGTGATAGTAGGGGT+GGG + chr8.2:32948153-32948172 None:intergenic 45.0%
CATGCCCATGAATCTTCTGA+AGG + chr8.2:32948947-32948966 None:intergenic 45.0%
CATGGCACACAAATGTCACT+TGG + chr8.2:32948910-32948929 None:intergenic 45.0%
CGAGCCTTCAGAAGATTCAT+GGG - chr8.2:32948940-32948959 MS.gene93078:intron 45.0%
CTTCAGAAGATTCATGGGCA+TGG - chr8.2:32948945-32948964 MS.gene93078:intron 45.0%
GACATTTGTGTGCCATGTGA+GGG - chr8.2:32948913-32948932 MS.gene93078:intron 45.0%
GGATGTGGAGACCCTTTAAT+GGG + chr8.2:32948989-32949008 None:intergenic 45.0%
GTAGTTGATTGCGCTTTCTC+AGG + chr8.2:32948707-32948726 None:intergenic 45.0%
GTCGTTGTAGTAGTGATGGT+AGG + chr8.2:32948495-32948514 None:intergenic 45.0%
GTTGGGATACTGGTGATAGT+AGG + chr8.2:32948159-32948178 None:intergenic 45.0%
TCGGCTTAAGTGGGGTAATT+GGG + chr8.2:32948074-32948093 None:intergenic 45.0%
TGACATTTGTGTGCCATGTG+AGG - chr8.2:32948912-32948931 MS.gene93078:intron 45.0%
TGGATGTGGAGACCCTTTAA+TGG + chr8.2:32948990-32949009 None:intergenic 45.0%
TGGGATACTGGTGATAGTAG+GGG + chr8.2:32948157-32948176 None:intergenic 45.0%
TTAAAGGGTCTCCACATCCA+AGG - chr8.2:32948990-32949009 MS.gene93078:intron 45.0%
TTCGGCTTAAGTGGGGTAAT+TGG + chr8.2:32948075-32948094 None:intergenic 45.0%
TTGCTCTCTGGCTGATCTAA+CGG + chr8.2:32950286-32950305 None:intergenic 45.0%
TTGGTTGTGGTGGTTAGAGT+TGG + chr8.2:32947976-32947995 None:intergenic 45.0%
! GTAGTGAAGATGGTGGTAGT+GGG + chr8.2:32948426-32948445 None:intergenic 45.0%
! GTATTGGTGGTAATGTGGGA+AGG + chr8.2:32948231-32948250 None:intergenic 45.0%
! GTGTCGCTCATTGCAAAGAA+TGG + chr8.2:32949314-32949333 None:intergenic 45.0%
! TAGTGAAGATGGTGGTAGTG+GGG + chr8.2:32948425-32948444 None:intergenic 45.0%
! TGTTGGTTGCGATTTCACTG+CGG + chr8.2:32948638-32948657 None:intergenic 45.0%
!! CATGGAAGTGTAGGGTTTTG+AGG + chr8.2:32948012-32948031 None:intergenic 45.0%
!! CTTTGATGACTTGTTTCGGG+AGG + chr8.2:32950185-32950204 None:intergenic 45.0%
!!! TGGAAGTGTAGGGTTTTGAG+GGG + chr8.2:32948010-32948029 None:intergenic 45.0%
!!! GTATATTTTTTTAAAAAAAA+AGG - chr8.2:32949681-32949700 MS.gene93078:CDS 5.0%
CGGCTTAAGTGGGGTAATTG+GGG + chr8.2:32948073-32948092 None:intergenic 50.0%
CTCTAGGTGGGTGTGTGTTT+AGG + chr8.2:32949087-32949106 None:intergenic 50.0%
GATACTGGTGATAGTAGGGG+TGG + chr8.2:32948154-32948173 None:intergenic 50.0%
GGTAGGTATGATAGGGGTAG+TGG + chr8.2:32948478-32948497 None:intergenic 50.0%
GGTAGTGATGGTTGGGATAC+TGG + chr8.2:32948169-32948188 None:intergenic 50.0%
GGTGGTAGGAGTAGCAAAAG+TGG + chr8.2:32947935-32947954 None:intergenic 50.0%
GGTTGTAGGGGTAGTGAAGA+TGG + chr8.2:32948436-32948455 None:intergenic 50.0%
GTTGGTTGCGATTTCACTGC+GGG + chr8.2:32948637-32948656 None:intergenic 50.0%
GTTGTGGTGGTTAGAGTTGG+AGG + chr8.2:32947973-32947992 None:intergenic 50.0%
TACTGGTGATAGTAGGGGTG+GGG + chr8.2:32948152-32948171 None:intergenic 50.0%
TGAGCAGTGATGGTAGAGGT+GGG + chr8.2:32948399-32948418 None:intergenic 50.0%
TGGGGCTGAGTTATTCTCCT+TGG + chr8.2:32948055-32948074 None:intergenic 50.0%
TGTAGGGGTAGTGAAGATGG+TGG + chr8.2:32948433-32948452 None:intergenic 50.0%
! AGGTATGATAGGGGTAGTGG+TGG + chr8.2:32948475-32948494 None:intergenic 50.0%
! GGTAGTGAAGATGGTGGTAG+TGG + chr8.2:32948427-32948446 None:intergenic 50.0%
! TTGGGGTGGTAGTGATGGTT+GGG + chr8.2:32948176-32948195 None:intergenic 50.0%
!! AGTGAAGATGGTGGTAGTGG+GGG + chr8.2:32948424-32948443 None:intergenic 50.0%
AAGGCTCGTCTTCCCTCACA+TGG + chr8.2:32948928-32948947 None:intergenic 55.0%
ACTTGAGCCTCGTTGCTCTC+TGG + chr8.2:32950298-32950317 None:intergenic 55.0%
AGATCAGCCAGAGAGCAACG+AGG - chr8.2:32950288-32950307 MS.gene93078:CDS 55.0%
AGGGGGTAGGAGTAGTGGTT+GGG + chr8.2:32948194-32948213 None:intergenic 55.0%
AGGGTGGCGAATGTGGTTGT+AGG + chr8.2:32948450-32948469 None:intergenic 55.0%
CGCTTTCTCAGGGGTTGTTG+TGG + chr8.2:32948696-32948715 None:intergenic 55.0%
GAGCAGTGATGGTAGAGGTG+GGG + chr8.2:32948398-32948417 None:intergenic 55.0%
GATAGTAGGGGTGGGGATAG+TGG + chr8.2:32948145-32948164 None:intergenic 55.0%
GATGGTAGAGGTGGGGATAG+TGG + chr8.2:32948391-32948410 None:intergenic 55.0%
GGGTGGCGAATGTGGTTGTA+GGG + chr8.2:32948449-32948468 None:intergenic 55.0%
GGTAATGTGGGAAGGGATGG+TGG + chr8.2:32948223-32948242 None:intergenic 55.0%
GGTGGCGAATGTGGTTGTAG+GGG + chr8.2:32948448-32948467 None:intergenic 55.0%
GGTGTGAGCAGTGATGGTAG+AGG + chr8.2:32948403-32948422 None:intergenic 55.0%
GTGAGCAGTGATGGTAGAGG+TGG + chr8.2:32948400-32948419 None:intergenic 55.0%
GTGGTGGTTAGAGTTGGAGG+TGG + chr8.2:32947970-32947989 None:intergenic 55.0%
TGCGATTTCACTGCGGGCAT+GGG + chr8.2:32948631-32948650 None:intergenic 55.0%
TTGCGATTTCACTGCGGGCA+TGG + chr8.2:32948632-32948651 None:intergenic 55.0%
! AAGGGATGGTGGTGCTTGAG+GGG + chr8.2:32948212-32948231 None:intergenic 55.0%
! AGAGGTGGGGATAGTGGTGT+TGG + chr8.2:32948385-32948404 None:intergenic 55.0%
! AGGTGGGGATAGTGGTGTTG+GGG + chr8.2:32948383-32948402 None:intergenic 55.0%
! AGTGGTTGGGGTGGTAGTGA+TGG + chr8.2:32948181-32948200 None:intergenic 55.0%
! GAAGGGATGGTGGTGCTTGA+GGG + chr8.2:32948213-32948232 None:intergenic 55.0%
! GAGGTGGGGATAGTGGTGTT+GGG + chr8.2:32948384-32948403 None:intergenic 55.0%
! GATAGGGGTAGTGGTGGTGA+GGG + chr8.2:32948469-32948488 None:intergenic 55.0%
! GGTGGTAATGTGGGAAGGGA+TGG + chr8.2:32948226-32948245 None:intergenic 55.0%
! GTTGGGGTGGTAGTGATGGT+TGG + chr8.2:32948177-32948196 None:intergenic 55.0%
! TGATAGGGGTAGTGGTGGTG+AGG + chr8.2:32948470-32948489 None:intergenic 55.0%
GAGGGGGTAGGAGTAGTGGT+TGG + chr8.2:32948195-32948214 None:intergenic 60.0%
GCGATTTCACTGCGGGCATG+GGG + chr8.2:32948630-32948649 None:intergenic 60.0%
GCTTGAGGGGGTAGGAGTAG+TGG + chr8.2:32948199-32948218 None:intergenic 60.0%
GGGGGTAGGAGTAGTGGTTG+GGG + chr8.2:32948193-32948212 None:intergenic 60.0%
GGTAGGAGTAGTGGTTGGGG+TGG + chr8.2:32948190-32948209 None:intergenic 60.0%
! AGGGATGGTGGTGCTTGAGG+GGG + chr8.2:32948211-32948230 None:intergenic 60.0%
! AGTGGGGGTGTGAGCAGTGA+TGG + chr8.2:32948409-32948428 None:intergenic 60.0%
! ATGGTGGTGCTTGAGGGGGT+AGG + chr8.2:32948207-32948226 None:intergenic 60.0%
! GGAAGGGATGGTGGTGCTTG+AGG + chr8.2:32948214-32948233 None:intergenic 60.0%
! GGGGTGGGGATAGTGGTTGT+TGG + chr8.2:32948138-32948157 None:intergenic 60.0%
GGTGGTGAGGGTGGCGAATG+TGG + chr8.2:32948457-32948476 None:intergenic 65.0%
! AGGGGTAGTGGTGGTGAGGG+TGG + chr8.2:32948466-32948485 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 32947880 32950450 32947880 ID=MS.gene93078
chr8.2 mRNA 32947880 32950450 32947880 ID=MS.gene93078.t1;Parent=MS.gene93078
chr8.2 exon 32949525 32950450 32949525 ID=MS.gene93078.t1.exon1;Parent=MS.gene93078.t1
chr8.2 CDS 32949525 32950450 32949525 ID=cds.MS.gene93078.t1;Parent=MS.gene93078.t1
chr8.2 exon 32949319 32949435 32949319 ID=MS.gene93078.t1.exon2;Parent=MS.gene93078.t1
chr8.2 CDS 32949319 32949435 32949319 ID=cds.MS.gene93078.t1;Parent=MS.gene93078.t1
chr8.2 exon 32947880 32948297 32947880 ID=MS.gene93078.t1.exon3;Parent=MS.gene93078.t1
chr8.2 CDS 32947880 32948297 32947880 ID=cds.MS.gene93078.t1;Parent=MS.gene93078.t1
Gene Sequence

>MS.gene93078

ATGGACAATGATGATTGGGATCTCTTTTCTATTGTTCGTAGGTGCAAAGCTACCACTTTTGCTACTCCTACCACCAATTTTGAAACTCCACCTCCAACTCTAACCACCACAACCAATAACATCATATCCCCTCAAAACCCTACACTTCCATGCTTTGATGATTTTAGTTTTACCAAGGAGAATAACTCAGCCCCAATTACCCCACTTAAGCCGAATGATTTCATAGAGCTTGACAAATTGATAATCAGTTTCAATCCAACAACCACTATCCCCACCCCTACTATCACCAGTATCCCAACCATCACTACCACCCCAACCACTACTCCTACCCCCTCAAGCACCACCATCCCTTCCCACATTACCACCAATACCATCACTAACACTAGTTTTCATGATTCCAATCAAAATTCCACCTTTTCTAATTTCCCAACACTCATCGAACAACAACAACTGCAACTAAATGAGTTTACTGAGCTAGAAAAAATGGTACTTAAATTCTACCCCAACACCACTATCCCCACCTCTACCATCACTGCTCACACCCCCACTACCACCATCTTCACTACCCCTACAACCACATTCGCCACCCTCACCACCACTACCCCTATCATACCTACCATCACTACTACAACGACTAATACTAGTGTTTGTAAAACAAATCAATATCTTACAATTTCTGACTATCAAATACTCGTCGAACAACAACAGAATCAACCAAACCGTAACAATGAAGTGTATGTTTCTGAACCCCATGCCCGCAGTGAAATCGCAACCAACACTAGTTTTGATTGTGCATTCAACCATCCATCAATTCCACAACAACCCCTGAGAAAGCGCAATCAACTACCATTTCTACTACCTCGAACAAATTCTAGATTTTTACCAAATACACATCCGAAAAAACCAAAATTTAAATCAAGAAAAAGGTAAAGTATTTATTCCTATTATTTATTATATTTTAATTATATCAATTTTATTGTGACCTAAAGTCATTATACATTTCATTTTTTTACAGAAAAAATAATAACCAAGTGACATTTGTGTGCCATGTGAGGGAAGACGAGCCTTCAGAAGATTCATGGGCATGGAAAAAATATGGAGAAAAACCCATTAAAGGGTCTCCACATCCAAGGTTTTTATGCATTAAACACTCTAAATTTACATATTTGTCTTCTATTTCATGTTAAAAATAATAATTTTGTTACCTAAACACACACCCACCTAGAGTTTTAAATAGTGGTCGCAAAGACCATGATCCTTACCATTGGATGAATTTTGTTACATAATACACACACCCAACTAGAGTTTTAAATAGTGATCGGAAGGACCATGATCCTTACCATTGGAAAGAATTGTAGTTAAATGCAACATACGTGGTCTTAATCGCGGTTGCATTTGCATTTCAATTTAAAAATATCAAAAGTTATTACTCCATTCTTTGCAATGAGCGACACATTTTCAAAATTAAATTTTGTGACAAAATGAATGTCACTATTAATTTTCAATGTACTGTTAATTGCTTTTTGGTTTGATATGTTCTTAGTCCATGCAGATGTAACATTTTTTGCGTTTAGTCCCTCTGTTTTTTAGGAAACACAATTACACCTTTGATCTTTGGTCTTTGATGTTTGTTTTAGTTTCCGCAAAATTTATTTATAGTGAAATTGGTCCCTTCAATATCCATTTTAATCCTTATTTTAATAGAATAAAATCAAATATTCCACATATTAGAGAGATCAATTCTAATATGAATAAAGTTTGCAGGAGTAAAACAAAACAATAAAGACCAAAAGAAAAAGTGGTATATTTTTTTAAAAAAAAAGGAAGAAAAAGAAAAGAGAGGATATATTTGTAGGGACTAAAAATATATTTAAATATCACTTTTTATTTTTTTCAATTGTAATATTTAATTGATTTTAAACACATCACTCCTAAGAACTTTCACTTTATTTAAATCTCACTTCATTTATATATATATTTTTTAAAATATGTATAAATTAAACCAATATGTTACTCAGTGTAAGACGGATCCAGATTGCATACCTTTATGTAAAACTCTCATGTATACATTTATATGTGTATGGTTTTATCTATCAAAATAGTATGATTTAGCGGTGTTTGATATGAAAAGATATCAATGAATGATTTTGTAGGAGCTACTACAAATGTAGAAGTTTCTGGGATTGTTCGGCAAAAAAACTAGTAGAGAAAAGCAAAACCAGTGAGAACACTTATGTTGTGACATATAAAGGAGAACACAATCATGAAAAACCAGCAGTTAATCAGAACTCTGTTGTTGGGACCTCCCGAAACAAGTCATCAAAGACTAGATTATGCATTGGCAAAGAAGCTGGATCTTGCGCAAATGTCAGAAACTTGGAATCGCCTAATATGGCGATGTTGCCGTTAGATCAGCCAGAGAGCAACGAGGCTCAAGTTCTTACCGATACGTCTATGGAGTTTTTGGGAAGCTCTGATGACGATGTCATTTTGATACCAAACATGACACCTATGTTAGAGGATCTCTTGATGGACTTCAACCAGATCAATAGTGGTGCTCTATTCCCTTAG
Protein sequence

>MS.gene93078.t1

MDNDDWDLFSIVRRCKATTFATPTTNFETPPPTLTTTTNNIISPQNPTLPCFDDFSFTKENNSAPITPLKPNDFIELDKLIISFNPTTTIPTPTITSIPTITTTPTTTPTPSSTTIPSHITTNTITNTSFHDSNQNSTFSNFPTLIEQQQLQLNEFTELEKMVLKFYPNTTIPTSTITAHTPTTTIFTTPTTTFATLTTTTPIIPTITTTTTNTSVCKTNQYLTISDYQILVEQQQNQPNRNNEVYVSEPHARSEIATNTSFDCAFNHPSIPQQPLRKRNQLPFLLPRTNSRFLPNTHPKKPKFKSRKRKNNNQVTFVCHVREDEPSEDSWAWKKYGEKPIKGSPHPRSYYKCRSFWDCSAKKLVEKSKTSENTYVVTYKGEHNHEKPAVNQNSVVGTSRNKSSKTRLCIGKEAGSCANVRNLESPNMAMLPLDQPESNEAQVLTDTSMEFLGSSDDDVILIPNMTPMLEDLLMDFNQINSGALFP