AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene93921

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene93921.t1 MTR_4g033295 95.897 195 6 2 1 194 1 194 3.16e-137 381
MS.gene93921.t1 MTR_4g033295 95.556 180 6 2 1 179 1 179 1.85e-124 348
MS.gene93921.t1 MTR_4g033295 94.904 157 6 2 1 156 1 156 7.17e-101 289
MS.gene93921.t1 MTR_1g052470 67.416 89 27 1 104 190 282 370 1.96e-36 130
MS.gene93921.t1 MTR_4g065870 74.684 79 20 0 113 191 350 428 3.33e-36 131
MS.gene93921.t1 MTR_3g028520 68.132 91 27 1 106 194 308 398 1.33e-35 129
MS.gene93921.t1 MTR_3g027650 68.132 91 27 1 106 194 308 398 1.33e-35 129
MS.gene93921.t1 MTR_8g036235 67.045 88 27 1 106 191 302 389 1.38e-34 126
MS.gene93921.t1 MTR_2g098310 68.966 87 25 1 106 190 318 404 1.76e-33 123
MS.gene93921.t1 MTR_7g092540 64.368 87 29 1 106 190 229 315 4.95e-33 120
MS.gene93921.t1 MTR_1g116790 60.440 91 36 0 100 190 247 337 5.76e-32 118
MS.gene93921.t1 MTR_4g065870 82.090 67 12 0 113 179 350 416 6.80e-32 119
MS.gene93921.t1 MTR_3g027650 75.000 76 17 1 106 179 308 383 8.94e-32 119
MS.gene93921.t1 MTR_2g098310 72.152 79 20 1 106 182 318 396 4.69e-30 114
MS.gene93921.t1 MTR_7g092540 68.354 79 23 1 106 182 229 307 1.78e-29 110
MS.gene93921.t1 MTR_2g098310 49.180 122 25 2 106 190 318 439 1.16e-26 105
MS.gene93921.t1 MTR_3g027650 81.132 53 8 1 106 156 308 360 6.50e-22 91.7
MS.gene93921.t1 MTR_8g036235 77.358 53 10 1 106 156 302 354 2.83e-20 87.4
MS.gene93921.t1 MTR_4g065870 88.636 44 5 0 113 156 350 393 5.70e-20 86.7
MS.gene93921.t1 MTR_2g098310 77.358 53 10 1 106 156 318 370 2.83e-19 84.7
MS.gene93921.t1 MTR_4g131160 62.121 66 24 1 117 182 198 262 3.31e-19 84.3
MS.gene93921.t1 MTR_4g131160 62.121 66 24 1 117 182 195 259 3.49e-19 84.3
MS.gene93921.t1 MTR_3g498825 60.000 65 26 0 118 182 147 211 7.63e-18 80.1
MS.gene93921.t1 MTR_1g080890 59.091 66 26 1 117 182 192 256 1.79e-17 79.3
MS.gene93921.t1 MTR_1g017350 58.462 65 27 0 118 182 260 324 8.63e-17 77.8
MS.gene93921.t1 MTR_1g017350 58.462 65 27 0 118 182 260 324 8.72e-17 77.8
MS.gene93921.t1 MTR_1g017350 58.462 65 27 0 118 182 260 324 9.02e-17 77.8
MS.gene93921.t1 MTR_1g017350 58.462 65 27 0 118 182 260 324 9.37e-17 77.8
MS.gene93921.t1 MTR_5g048860 56.923 65 28 0 118 182 365 429 1.03e-15 74.7
MS.gene93921.t1 MTR_8g065740 55.385 65 29 0 118 182 305 369 1.21e-15 74.7
MS.gene93921.t1 MTR_8g099880 55.385 65 29 0 118 182 145 209 1.32e-15 73.9
MS.gene93921.t1 MTR_7g053410 55.385 65 29 0 118 182 317 381 2.19e-15 73.9
MS.gene93921.t1 MTR_7g053410 55.385 65 29 0 118 182 317 381 2.21e-15 73.9
MS.gene93921.t1 MTR_3g116770 55.385 65 29 0 118 182 191 255 2.31e-15 73.6
MS.gene93921.t1 MTR_3g116770 55.385 65 29 0 118 182 191 255 2.31e-15 73.6
MS.gene93921.t1 MTR_8g012290 55.385 65 29 0 118 182 291 355 3.31e-15 73.2
MS.gene93921.t1 MTR_8g012290 55.385 65 29 0 118 182 291 355 3.48e-15 73.2
MS.gene93921.t1 MTR_6g052280 72.727 44 12 0 113 156 49 92 4.74e-15 68.9
MS.gene93921.t1 MTR_4g070320 53.846 65 30 0 118 182 143 207 1.44e-14 71.2
MS.gene93921.t1 MTR_1g018090 57.576 66 27 1 117 182 273 337 3.57e-14 70.1
MS.gene93921.t1 MTR_8g062240 49.231 65 33 0 118 182 151 215 2.44e-13 67.0
MS.gene93921.t1 MTR_5g037250 47.692 65 34 0 118 182 112 176 4.66e-13 65.9
MS.gene93921.t1 MTR_3g103030 53.030 66 30 1 117 182 228 292 5.39e-13 66.6
MS.gene93921.t1 MTR_5g005110 54.545 66 29 1 117 182 223 287 8.95e-13 65.9
MS.gene93921.t1 MTR_7g092510 49.231 65 33 0 118 182 173 237 2.65e-12 64.7
MS.gene93921.t1 MTR_1g070870 62.121 66 24 1 117 182 119 183 5.71e-12 63.2
MS.gene93921.t1 MTR_1g070870 62.121 66 24 1 117 182 122 186 5.72e-12 63.2
MS.gene93921.t1 MTR_3g101810 56.140 57 24 1 128 184 181 236 8.36e-12 62.8
MS.gene93921.t1 MTR_1g059270 46.154 65 35 0 118 182 160 224 1.05e-11 62.4
MS.gene93921.t1 MTR_1g059270 46.154 65 35 0 118 182 160 224 1.35e-11 62.4
MS.gene93921.t1 MTR_8g093500 59.259 54 21 1 128 181 124 176 3.25e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene93921.t1 AT1G35460 45.299 234 70 7 10 190 25 253 1.73e-49 161
MS.gene93921.t1 AT4G09180 46.667 195 70 5 9 194 90 259 3.78e-43 145
MS.gene93921.t1 AT1G51140 67.442 86 28 0 106 191 292 377 1.64e-36 130
MS.gene93921.t1 AT2G42280 74.074 81 21 0 110 190 271 351 1.77e-35 127
MS.gene93921.t1 AT2G43140 68.293 82 26 0 109 190 125 206 9.93e-34 119
MS.gene93921.t1 AT2G43140 68.293 82 26 0 109 190 222 303 2.43e-33 121
MS.gene93921.t1 AT1G05805 60.870 92 33 1 106 194 268 359 3.72e-32 119
MS.gene93921.t1 AT2G42280 80.000 70 14 0 110 179 271 340 1.62e-31 117
MS.gene93921.t1 AT1G35460 40.000 200 62 7 10 156 25 219 1.14e-27 104
MS.gene93921.t1 AT2G24260 63.636 66 23 1 117 182 34 98 3.78e-20 85.1
MS.gene93921.t1 AT2G24260 62.687 67 24 1 116 182 136 201 2.01e-19 84.7
MS.gene93921.t1 AT4G30980 62.121 66 24 1 117 182 129 193 2.88e-19 84.0
MS.gene93921.t1 AT4G30980 62.121 66 24 1 117 182 177 241 5.63e-19 83.6
MS.gene93921.t1 AT5G58010 59.091 66 26 1 117 182 98 162 9.97e-19 82.0
MS.gene93921.t1 AT4G34530 55.128 78 35 0 105 182 159 236 1.78e-17 79.3
MS.gene93921.t1 AT5G50915 58.462 65 27 0 118 182 136 200 8.23e-17 76.6
MS.gene93921.t1 AT5G50915 58.462 65 27 0 118 182 136 200 8.23e-17 76.6
MS.gene93921.t1 AT5G50915 58.462 65 27 0 118 182 136 200 1.02e-16 76.6
MS.gene93921.t1 AT5G50915 58.462 65 27 0 118 182 136 200 1.02e-16 76.6
MS.gene93921.t1 AT1G10120 58.462 65 27 0 118 182 206 270 2.97e-16 75.9
MS.gene93921.t1 AT1G10120 58.462 65 27 0 118 182 206 270 2.97e-16 75.9
MS.gene93921.t1 AT1G26260 52.632 76 34 1 107 182 192 265 4.59e-16 75.5
MS.gene93921.t1 AT1G26260 52.632 76 34 1 107 182 163 236 4.67e-16 75.1
MS.gene93921.t1 AT1G26260 52.632 76 34 1 107 182 214 287 5.13e-16 75.5
MS.gene93921.t1 AT1G26260 52.632 76 34 1 107 182 214 287 5.13e-16 75.5
MS.gene93921.t1 AT1G26260 52.632 76 34 1 107 182 214 287 5.13e-16 75.5
MS.gene93921.t1 AT1G26260 52.632 76 34 1 107 182 214 287 5.13e-16 75.5
MS.gene93921.t1 AT1G68920 55.385 65 29 0 118 182 302 366 1.56e-15 74.3
MS.gene93921.t1 AT1G68920 55.385 65 29 0 118 182 303 367 1.58e-15 74.3
MS.gene93921.t1 AT1G68920 55.385 65 29 0 118 182 303 367 1.58e-15 74.3
MS.gene93921.t1 AT1G68920 55.385 65 29 0 118 182 303 367 1.58e-15 74.3
MS.gene93921.t1 AT1G18400 53.846 65 30 0 118 182 145 209 2.10e-15 72.4
MS.gene93921.t1 AT1G18400 53.846 65 30 0 118 182 145 209 3.03e-15 72.0
MS.gene93921.t1 AT3G07340 55.385 65 29 0 118 182 258 322 3.65e-15 73.2
MS.gene93921.t1 AT3G07340 55.385 65 29 0 118 182 258 322 3.87e-15 73.2
MS.gene93921.t1 AT1G73830 53.846 65 30 0 118 182 147 211 4.36e-15 71.6
MS.gene93921.t1 AT1G73830 53.846 65 30 0 118 182 147 211 4.88e-15 71.6
MS.gene93921.t1 AT1G25330 55.385 65 29 0 118 182 104 168 9.51e-15 70.1
MS.gene93921.t1 AT5G48560 53.846 65 30 0 118 182 301 365 1.34e-14 71.6
MS.gene93921.t1 AT5G48560 53.846 65 30 0 118 182 301 365 1.40e-14 71.6
MS.gene93921.t1 AT2G14760 57.576 66 27 1 117 182 236 300 2.75e-14 70.1
MS.gene93921.t1 AT4G33880 57.576 66 27 1 117 182 265 329 3.64e-14 70.1
MS.gene93921.t1 AT5G43175 50.000 72 35 1 113 184 127 197 3.67e-14 68.6
MS.gene93921.t1 AT1G27740 42.857 98 55 1 85 182 134 230 4.92e-14 68.9
MS.gene93921.t1 AT3G23690 52.308 65 31 0 118 182 191 255 7.29e-14 69.3
MS.gene93921.t1 AT2G18300 50.769 65 32 0 118 182 185 249 1.45e-13 68.2
MS.gene93921.t1 AT2G18300 50.769 65 32 0 118 182 185 249 1.45e-13 68.2
MS.gene93921.t1 AT2G18300 50.769 65 32 0 118 182 185 249 1.49e-13 68.2
MS.gene93921.t1 AT2G42300 50.746 67 33 0 116 182 183 249 1.89e-13 67.4
MS.gene93921.t1 AT3G57800 50.746 67 33 0 116 182 202 268 2.02e-13 68.2
MS.gene93921.t1 AT2G42300 50.746 67 33 0 116 182 183 249 2.09e-13 67.8
MS.gene93921.t1 AT4G36540 50.769 65 32 0 118 182 141 205 2.38e-13 67.4
MS.gene93921.t1 AT4G36540 50.769 65 32 0 118 182 141 205 2.51e-13 67.4
MS.gene93921.t1 AT1G59640 49.231 65 33 0 118 182 136 200 4.44e-13 66.2
MS.gene93921.t1 AT1G59640 49.231 65 33 0 118 182 136 200 6.62e-13 66.2
MS.gene93921.t1 AT4G02590 58.571 70 28 1 113 182 78 146 1.36e-11 62.0
MS.gene93921.t1 AT4G02590 58.571 70 28 1 113 182 141 209 1.54e-11 62.4
MS.gene93921.t1 AT4G02590 58.571 70 28 1 113 182 141 209 1.54e-11 62.4
MS.gene93921.t1 AT5G62610 44.615 65 36 0 118 182 153 217 1.56e-11 62.0
MS.gene93921.t1 AT5G62610 44.615 65 36 0 118 182 153 217 1.56e-11 62.0
MS.gene93921.t1 AT1G03040 60.606 66 25 1 117 182 138 202 2.07e-11 62.0
MS.gene93921.t1 AT1G03040 60.606 66 25 1 117 182 143 207 2.32e-11 61.6
MS.gene93921.t1 AT1G03040 60.606 66 25 1 117 182 143 207 2.97e-11 61.6

Find 42 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAGGGATGCAACCTGTTTC+TGG 0.107166 4.3:+66871448 None:intergenic
TATAGCAATTGACCTTAAAA+TGG 0.344917 4.3:+66872863 MS.gene93921:CDS
AGCTAAACCTTATCCATGTT+TGG 0.359092 4.3:-66873133 None:intergenic
GAGTAATAGTCAGATAAATA+TGG 0.359307 4.3:-66871658 None:intergenic
CCTGTTTCTGGTGGTGGTGG+TGG 0.393981 4.3:+66871460 MS.gene93921:CDS
GTTGCTGCTGGCCATGGCCC+TGG 0.424369 4.3:+66871613 MS.gene93921:CDS
ACTTGTGCCAAACATGGATA+AGG 0.436150 4.3:+66873126 MS.gene93921:CDS
TCCAAGGAGTATTGCTGAAA+GGG 0.458068 4.3:+66872947 MS.gene93921:CDS
ACCCTTTCAGCAATACTCCT+TGG 0.458639 4.3:-66872948 None:intergenic
ATGCAACCTGTTTCTGGTGG+TGG 0.462666 4.3:+66871454 MS.gene93921:CDS
CAACCTGTTTCTGGTGGTGG+TGG 0.493212 4.3:+66871457 MS.gene93921:CDS
TCTAATAATAACGTTGCTGC+TGG 0.510052 4.3:+66871601 MS.gene93921:CDS
AACGGAATTATGCATTTACT+CGG 0.513601 4.3:-66875562 None:intergenic
GACTCAGGAGTTGAAGGACC+AGG 0.517315 4.3:-66871631 None:intergenic
GGATGAGACTCAGGAGTTGA+AGG 0.519475 4.3:-66871637 None:intergenic
AATAACGTTGCTGCTGGCCA+TGG 0.521119 4.3:+66871607 MS.gene93921:CDS
GATAAATATGGATGAGACTC+AGG 0.521953 4.3:-66871646 None:intergenic
GTTTCTACAGAATCAAATTG+AGG 0.522450 4.3:+66875388 MS.gene93921:CDS
TTAAAGGGAGTTGATGATAG+TGG 0.524914 4.3:+66872840 MS.gene93921:intron
TTGACAGATGTAGGAGTAAG+TGG 0.525544 4.3:-66871685 None:intergenic
TTAACTCAACTCCGGCGAGT+TGG 0.529984 4.3:+66871494 MS.gene93921:CDS
CGCTTTGCTCGAATCTTACA+CGG 0.531001 4.3:-66872909 None:intergenic
TTAGCAACATTGACAGATGT+AGG 0.531316 4.3:-66871694 None:intergenic
AAGTAAAGTACCTGAGTGAA+AGG 0.536445 4.3:-66871721 None:intergenic
GAGTTGAAGGACCAGGGCCA+TGG 0.547344 4.3:-66871624 None:intergenic
CGCAGAGATGTTAGATGAGG+CGG 0.558021 4.3:+66875352 MS.gene93921:CDS
ATCCAAGGAGTATTGCTGAA+AGG 0.558668 4.3:+66872946 MS.gene93921:CDS
GTGGTGGTGGTGGTTTGACA+CGG 0.560788 4.3:+66871470 MS.gene93921:CDS
TCAAGAACTTGTGCCAAACA+TGG 0.569135 4.3:+66873120 MS.gene93921:CDS
GACACGGTTTAACTCAACTC+CGG 0.577713 4.3:+66871486 MS.gene93921:CDS
TGCTAATAATCCTTTCACTC+AGG 0.579907 4.3:+66871711 MS.gene93921:CDS
AACGATTCGAACCAACTCGC+CGG 0.594282 4.3:-66871505 None:intergenic
TGTAAGATTCGAGCAAAGCG+TGG 0.594947 4.3:+66872912 MS.gene93921:CDS
AACTATCAGAACAGCAAAGG+AGG 0.605279 4.3:+66875523 MS.gene93921:CDS
ACGGAATTATGCATTTACTC+GGG 0.609363 4.3:-66875561 None:intergenic
TTGTTGTTATGTAGGTTCGG+AGG 0.614896 4.3:+66873068 MS.gene93921:intron
GGGATGCAACCTGTTTCTGG+TGG 0.616290 4.3:+66871451 None:intergenic
AGGAACTATCAGAACAGCAA+AGG 0.629143 4.3:+66875520 MS.gene93921:intron
GTGGATTTGCTACTCATCCA+AGG 0.634120 4.3:+66872931 MS.gene93921:CDS
TACCGCAGAGATGTTAGATG+AGG 0.658172 4.3:+66875349 MS.gene93921:CDS
ACTCAGGAGTTGAAGGACCA+GGG 0.669262 4.3:-66871630 None:intergenic
CGCCTCATCTAACATCTCTG+CGG 0.686528 4.3:-66875351 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTATATATAATATACTAATA+TGG + chr4.3:66872652-66872671 MS.gene93921:intron 10.0%
!! ACAACATAAATTAAATTTGA+AGG + chr4.3:66874337-66874356 MS.gene93921:intron 15.0%
!! ATAGATAAATCAAGTAAATA+CGG - chr4.3:66871772-66871791 None:intergenic 15.0%
!! TATATAATATACTAATATGG+AGG + chr4.3:66872655-66872674 MS.gene93921:intron 15.0%
!! TTGTTTAATATAAAATTCTG+AGG - chr4.3:66873691-66873710 None:intergenic 15.0%
!!! AAATTTAGAAAGTACTAATT+GGG + chr4.3:66873525-66873544 MS.gene93921:intron 15.0%
!!! ATTCTTTAAATTTTAAGTGT+TGG + chr4.3:66872349-66872368 MS.gene93921:intron 15.0%
!! AAAACTATGTTATACATACT+CGG - chr4.3:66872268-66872287 None:intergenic 20.0%
!! AACAAAAGATAAATAAAGTC+AGG - chr4.3:66874623-66874642 None:intergenic 20.0%
!! AATTATTGACATAATGACAT+TGG + chr4.3:66873492-66873511 MS.gene93921:intron 20.0%
!! ACAAAAGATAAATAAAGTCA+GGG - chr4.3:66874622-66874641 None:intergenic 20.0%
!! ACTATAACATGTTTGTTTAA+TGG + chr4.3:66873170-66873189 MS.gene93921:intron 20.0%
!! ATATTAACATGTGATTTGAT+TGG + chr4.3:66872065-66872084 MS.gene93921:intron 20.0%
!! ATTAAACAAACATGTTATAG+TGG - chr4.3:66873171-66873190 None:intergenic 20.0%
!! CATAATGCTAATACTAATTT+GGG + chr4.3:66872987-66873006 MS.gene93921:intron 20.0%
!! CATGTAATAAAAGAAAAGAA+AGG - chr4.3:66873298-66873317 None:intergenic 20.0%
!! TATCAAAAATCATAAATGTG+AGG + chr4.3:66874040-66874059 MS.gene93921:intron 20.0%
!! TCATAATGCTAATACTAATT+TGG + chr4.3:66872986-66873005 MS.gene93921:intron 20.0%
!!! AAAATGGACAAAATTTTAGA+GGG + chr4.3:66872879-66872898 MS.gene93921:CDS 20.0%
!!! AAATAGAACATTTAAGATAG+TGG - chr4.3:66872469-66872488 None:intergenic 20.0%
!!! AATTTAGAAAGTACTAATTG+GGG + chr4.3:66873526-66873545 MS.gene93921:intron 20.0%
!!! ACCTGAATAAAAAGTATAAA+AGG - chr4.3:66873954-66873973 None:intergenic 20.0%
!!! AGATAAATCTTTCACATTTT+TGG + chr4.3:66874240-66874259 MS.gene93921:intron 20.0%
!!! ATTTTTAGTAACGTTTTAGT+AGG + chr4.3:66872025-66872044 MS.gene93921:intron 20.0%
!!! CAAATTTAGAAAGTACTAAT+TGG + chr4.3:66873524-66873543 MS.gene93921:intron 20.0%
!!! CCTGAATAAAAAGTATAAAA+GGG - chr4.3:66873953-66873972 None:intergenic 20.0%
!!! CTAAAATTTTGTCCATTTTA+AGG - chr4.3:66872878-66872897 None:intergenic 20.0%
!!! CTGAATAAAAAGTATAAAAG+GGG - chr4.3:66873952-66873971 None:intergenic 20.0%
!!! GATAAATCTTTCACATTTTT+GGG + chr4.3:66874241-66874260 MS.gene93921:intron 20.0%
!!! GTAACAATATGAATATCTTT+TGG - chr4.3:66872607-66872626 None:intergenic 20.0%
!!! TAAAATGGACAAAATTTTAG+AGG + chr4.3:66872878-66872897 MS.gene93921:CDS 20.0%
!!! TGTATTTTTGTGTGTTTAAA+GGG + chr4.3:66872825-66872844 MS.gene93921:intron 20.0%
!!! TTTTGTTCTTATTCCTTATT+GGG + chr4.3:66872768-66872787 MS.gene93921:intron 20.0%
!!! TTTTTGTTCTTATTCCTTAT+TGG + chr4.3:66872767-66872786 MS.gene93921:intron 20.0%
! AACTTCAAATTCAAAGAGAA+AGG - chr4.3:66873472-66873491 None:intergenic 25.0%
! AAGATACAAAGCATAATGTA+TGG - chr4.3:66873237-66873256 None:intergenic 25.0%
! AATACAAAATCATCCTCATT+TGG - chr4.3:66874423-66874442 None:intergenic 25.0%
! ACACCTAAGAATTACTTATA+AGG + chr4.3:66872568-66872587 MS.gene93921:intron 25.0%
! ACTATTAATTTCTTCTTTGG+CGG + chr4.3:66874937-66874956 MS.gene93921:intron 25.0%
! ACTTCAAATTCAAAGAGAAA+GGG - chr4.3:66873471-66873490 None:intergenic 25.0%
! ACTTGAACAAAATCATTTCA+TGG - chr4.3:66873205-66873224 None:intergenic 25.0%
! ATACAAAATCATCCTCATTT+GGG - chr4.3:66874422-66874441 None:intergenic 25.0%
! CAAAAGATAAATAAAGTCAG+GGG - chr4.3:66874621-66874640 None:intergenic 25.0%
! CATTTATTAAATGGCAAACA+GGG - chr4.3:66871962-66871981 None:intergenic 25.0%
! CTAAATTTATGCTTGTCATT+TGG + chr4.3:66875428-66875447 MS.gene93921:intron 25.0%
! GACACTATTAATTTCTTCTT+TGG + chr4.3:66874934-66874953 MS.gene93921:intron 25.0%
! GAGTAATAGTCAGATAAATA+TGG - chr4.3:66871661-66871680 None:intergenic 25.0%
! GCATTTCTCTATCAAAATAT+AGG + chr4.3:66875037-66875056 MS.gene93921:intron 25.0%
! TACAAGAACAAAAGAAACTT+AGG - chr4.3:66875320-66875339 None:intergenic 25.0%
! TACTTTATTATTGTTCAGTC+TGG + chr4.3:66871743-66871762 MS.gene93921:intron 25.0%
! TATAGCAATTGACCTTAAAA+TGG + chr4.3:66872863-66872882 MS.gene93921:CDS 25.0%
! TATCAAAATATAGGAGGATA+GGG + chr4.3:66875046-66875065 MS.gene93921:intron 25.0%
! TATTGTTACAGAAAGATGAT+AGG + chr4.3:66872618-66872637 MS.gene93921:intron 25.0%
! TCTCAAATTATTAACGATGT+CGG + chr4.3:66871905-66871924 MS.gene93921:intron 25.0%
! TGAAAGAAATAGAGAACATT+GGG - chr4.3:66874479-66874498 None:intergenic 25.0%
! TGGATACTATGTAACTAATA+TGG + chr4.3:66874571-66874590 MS.gene93921:intron 25.0%
! TTAGCACTGTATTAAGTTAA+TGG - chr4.3:66872418-66872437 None:intergenic 25.0%
! TTGATATCTCTCAATCATTA+AGG - chr4.3:66874026-66874045 None:intergenic 25.0%
! TTTCTCTATCAAAATATAGG+AGG + chr4.3:66875040-66875059 MS.gene93921:intron 25.0%
!! CTGTTTGCCATTTAATAAAT+GGG + chr4.3:66871961-66871980 MS.gene93921:intron 25.0%
!! CTTTTCTTTTATTACATGTG+AGG + chr4.3:66873300-66873319 MS.gene93921:intron 25.0%
!! TGTTTGCCATTTAATAAATG+GGG + chr4.3:66871962-66871981 MS.gene93921:intron 25.0%
!! TTCATTTTCTCTCTTAATTG+CGG + chr4.3:66875292-66875311 MS.gene93921:intron 25.0%
!! TTTGAGTAAAGGAACTTTTA+AGG - chr4.3:66873564-66873583 None:intergenic 25.0%
!!! AACATAGTTTTACAACTGTT+AGG + chr4.3:66872277-66872296 MS.gene93921:intron 25.0%
!!! CCCTTTTATACTTTTTATTC+AGG + chr4.3:66873950-66873969 MS.gene93921:intron 25.0%
!!! CTGTATTTTTGTGTGTTTAA+AGG + chr4.3:66872824-66872843 MS.gene93921:intron 25.0%
AAAAGTCCAAACATGATGTT+TGG - chr4.3:66874096-66874115 None:intergenic 30.0%
AAAGTCCAAACATGATGTTT+GGG - chr4.3:66874095-66874114 None:intergenic 30.0%
ATCGAATACATTCAAGTCTT+CGG + chr4.3:66872160-66872179 MS.gene93921:intron 30.0%
CAACTTAACTACAAATCCTT+AGG + chr4.3:66873919-66873938 MS.gene93921:intron 30.0%
CCATTTATTAAATGGCAAAC+AGG - chr4.3:66871963-66871982 None:intergenic 30.0%
CCTAAGAATTACTTATAAGG+AGG + chr4.3:66872571-66872590 MS.gene93921:intron 30.0%
CCTCCTTATAAGTAATTCTT+AGG - chr4.3:66872574-66872593 None:intergenic 30.0%
CTAAGGATTTGTAGTTAAGT+TGG - chr4.3:66873921-66873940 None:intergenic 30.0%
CTATCAAAATATAGGAGGAT+AGG + chr4.3:66875045-66875064 MS.gene93921:intron 30.0%
GAACTCAAAAATTGTATTGG+AGG - chr4.3:66874398-66874417 None:intergenic 30.0%
GACTATAACAGAACATAATG+AGG + chr4.3:66872699-66872718 MS.gene93921:intron 30.0%
GGAGAACTCAAAAATTGTAT+TGG - chr4.3:66874401-66874420 None:intergenic 30.0%
GTGAAAGAAATAGAGAACAT+TGG - chr4.3:66874480-66874499 None:intergenic 30.0%
GTTTCTACAGAATCAAATTG+AGG + chr4.3:66875388-66875407 MS.gene93921:CDS 30.0%
TAAAAGGGGATTAAAACCTA+AGG - chr4.3:66873938-66873957 None:intergenic 30.0%
TAAATTCAGCGTATACATTC+TGG - chr4.3:66873895-66873914 None:intergenic 30.0%
TCAAAAATTGTATTGGAGGA+GGG - chr4.3:66874394-66874413 None:intergenic 30.0%
TCATGTCTTTCGTTTCTAAA+AGG - chr4.3:66874884-66874903 None:intergenic 30.0%
TCATTTGCCTAATCCAAATT+GGG + chr4.3:66873020-66873039 MS.gene93921:intron 30.0%
TGACCAATTCTGTTATAAGT+GGG + chr4.3:66875110-66875129 MS.gene93921:intron 30.0%
TGCATGAATTGATACATTAC+AGG + chr4.3:66875500-66875519 MS.gene93921:intron 30.0%
TTACTCAAAACTAGCAAGTT+GGG + chr4.3:66873575-66873594 MS.gene93921:intron 30.0%
TTTACTCAAAACTAGCAAGT+TGG + chr4.3:66873574-66873593 MS.gene93921:intron 30.0%
TTTGGAAGGTGAGAAATATA+GGG + chr4.3:66874211-66874230 MS.gene93921:intron 30.0%
! AACATCATGTTTGGACTTTT+TGG + chr4.3:66874096-66874115 MS.gene93921:intron 30.0%
! AACTCACAAACAAAGCATTA+AGG + chr4.3:66874545-66874564 MS.gene93921:intron 30.0%
! CCTGTTTGCCATTTAATAAA+TGG + chr4.3:66871960-66871979 MS.gene93921:intron 30.0%
! GTATACATTCTGGCATTTTT+CGG - chr4.3:66873885-66873904 None:intergenic 30.0%
! GTTGAATTGTTTTCCCAATA+AGG - chr4.3:66872784-66872803 None:intergenic 30.0%
! TGACATAATGACATTGGTTA+AGG + chr4.3:66873498-66873517 MS.gene93921:intron 30.0%
!! AAAATTCTGAGGTTCAAATC+TGG - chr4.3:66873680-66873699 None:intergenic 30.0%
!! TAATGCTTTGTTTGTGAGTT+TGG - chr4.3:66874545-66874564 None:intergenic 30.0%
!! TACAATCTTAGGCTTTGTTT+GGG + chr4.3:66874161-66874180 MS.gene93921:intron 30.0%
!! TGAGTTTCTTGTTGTTATGT+AGG + chr4.3:66873060-66873079 MS.gene93921:intron 30.0%
!! TTCTTGTTGTTATGTAGGTT+CGG + chr4.3:66873065-66873084 MS.gene93921:intron 30.0%
!!! AACTTGCTAGTTTTGAGTAA+AGG - chr4.3:66873575-66873594 None:intergenic 30.0%
!!! GGTTTTGAGTGAAATTTACT+TGG + chr4.3:66873321-66873340 MS.gene93921:intron 30.0%
AAAGAGAAAGGGTAGTTAAG+TGG - chr4.3:66873460-66873479 None:intergenic 35.0%
AAGAAATAGAGAACATTGGG+AGG - chr4.3:66874476-66874495 None:intergenic 35.0%
AAGCAACCAAGTAAGTGAAT+TGG - chr4.3:66872200-66872219 None:intergenic 35.0%
AAGTTCACCCAATTTGGATT+AGG - chr4.3:66873030-66873049 None:intergenic 35.0%
AATATTAGATGGAGAGAGAG+AGG + chr4.3:66872129-66872148 MS.gene93921:intron 35.0%
ACATGATGTTTGGGCAAAAA+CGG - chr4.3:66874086-66874105 None:intergenic 35.0%
AGAAATAGAGAACATTGGGA+GGG - chr4.3:66874475-66874494 None:intergenic 35.0%
AGCTAAACCTTATCCATGTT+TGG - chr4.3:66873136-66873155 None:intergenic 35.0%
AGGATCTCAAATGAGAATGT+AGG + chr4.3:66874771-66874790 MS.gene93921:intron 35.0%
CAGAAAAAGTTCACCCAATT+TGG - chr4.3:66873036-66873055 None:intergenic 35.0%
CATTAAGGTTACTGCAAAAG+TGG - chr4.3:66874011-66874030 None:intergenic 35.0%
CTCAAAAATTGTATTGGAGG+AGG - chr4.3:66874395-66874414 None:intergenic 35.0%
CTCTCTCTCCATCTAATATT+GGG - chr4.3:66872129-66872148 None:intergenic 35.0%
GATAAATATGGATGAGACTC+AGG - chr4.3:66871649-66871668 None:intergenic 35.0%
GCAAGACCCCATTTATTAAA+TGG - chr4.3:66871971-66871990 None:intergenic 35.0%
GTCATTTGCCTAATCCAAAT+TGG + chr4.3:66873019-66873038 MS.gene93921:intron 35.0%
GTGACCAATTCTGTTATAAG+TGG + chr4.3:66875109-66875128 MS.gene93921:intron 35.0%
GTTAGAAGCCCAATATTAGA+TGG + chr4.3:66872118-66872137 MS.gene93921:intron 35.0%
TACGAAACACGAACACTTAT+CGG + chr4.3:66871825-66871844 MS.gene93921:intron 35.0%
TAGTTAGCCAATTTACCACT+GGG - chr4.3:66874797-66874816 None:intergenic 35.0%
TATGTAAACACAGACACGTT+TGG + chr4.3:66874136-66874155 MS.gene93921:intron 35.0%
TCTAATAATAACGTTGCTGC+TGG + chr4.3:66871601-66871620 MS.gene93921:CDS 35.0%
TCTCCCACTTATAACAGAAT+TGG - chr4.3:66875116-66875135 None:intergenic 35.0%
TCTCTCTCTCCATCTAATAT+TGG - chr4.3:66872130-66872149 None:intergenic 35.0%
TGAACTGTCTGATTCTGATT+GGG + chr4.3:66873733-66873752 MS.gene93921:intron 35.0%
TGATACTTCGCAAATTTGAG+AGG - chr4.3:66872388-66872407 None:intergenic 35.0%
TGATGTCCAATTCACTTACT+TGG + chr4.3:66872191-66872210 MS.gene93921:intron 35.0%
TGCTAATAATCCTTTCACTC+AGG + chr4.3:66871711-66871730 MS.gene93921:CDS 35.0%
TTAGCAACATTGACAGATGT+AGG - chr4.3:66871697-66871716 None:intergenic 35.0%
TTGGAAGGTGAGAAATATAG+GGG + chr4.3:66874212-66874231 MS.gene93921:intron 35.0%
TTTGCAGTTAGTAACCGTTT+GGG + chr4.3:66875169-66875188 MS.gene93921:intron 35.0%
! AAGTAAAGTACCTGAGTGAA+AGG - chr4.3:66871724-66871743 None:intergenic 35.0%
! CAAACAAAGCATTAAGGTAG+TGG + chr4.3:66874551-66874570 MS.gene93921:intron 35.0%
! CATTTGATCTGGGATTACAT+GGG + chr4.3:66875227-66875246 MS.gene93921:intron 35.0%
! CGTGTGTTGTGTTTTATGAT+CGG + chr4.3:66873383-66873402 MS.gene93921:intron 35.0%
! CTTTGGAAGGTGAGAAATAT+AGG + chr4.3:66874210-66874229 MS.gene93921:intron 35.0%
! GTGTTATTATAGTGACATGG+AGG + chr4.3:66872677-66872696 MS.gene93921:intron 35.0%
! TCATGTTTGGACTTTTTGGA+AGG + chr4.3:66874100-66874119 MS.gene93921:intron 35.0%
! TTTTCAACTACACAGAAACC+TGG - chr4.3:66873602-66873621 None:intergenic 35.0%
! TTTTGCAGTTAGTAACCGTT+TGG + chr4.3:66875168-66875187 MS.gene93921:intron 35.0%
! TTTTGCCCAAACATCATGTT+TGG + chr4.3:66874087-66874106 MS.gene93921:intron 35.0%
!! CTACAATCTTAGGCTTTGTT+TGG + chr4.3:66874160-66874179 MS.gene93921:intron 35.0%
!! GAGGTGTTATTATAGTGACA+TGG + chr4.3:66872674-66872693 MS.gene93921:intron 35.0%
!! TTAAAGGGAGTTGATGATAG+TGG + chr4.3:66872840-66872859 MS.gene93921:intron 35.0%
!!! TTTTTGAGTTCTCCCAAATG+AGG + chr4.3:66874407-66874426 MS.gene93921:intron 35.0%
AAACGGAGACATATCAGACA+AGG - chr4.3:66874069-66874088 None:intergenic 40.0%
AACTATCAGAACAGCAAAGG+AGG + chr4.3:66875523-66875542 MS.gene93921:CDS 40.0%
ACTAGTTGCACAAGTCCATT+AGG + chr4.3:66874813-66874832 MS.gene93921:intron 40.0%
ACTTGTGCCAAACATGGATA+AGG + chr4.3:66873126-66873145 MS.gene93921:CDS 40.0%
AGGAACTATCAGAACAGCAA+AGG + chr4.3:66875520-66875539 MS.gene93921:intron 40.0%
AGGGAATAATATGTCGTGGT+AGG + chr4.3:66875065-66875084 MS.gene93921:intron 40.0%
ATTCGACACACCAACAACAT+GGG - chr4.3:66872094-66872113 None:intergenic 40.0%
CAATATCAACTTGGCGGAAT+TGG - chr4.3:66873805-66873824 None:intergenic 40.0%
CACACACAATATCAACTTGG+CGG - chr4.3:66873811-66873830 None:intergenic 40.0%
CACGTTTGGACTACAATCTT+AGG + chr4.3:66874150-66874169 MS.gene93921:intron 40.0%
CTAGTTAGCCAATTTACCAC+TGG - chr4.3:66874798-66874817 None:intergenic 40.0%
CTGAACTGTCTGATTCTGAT+TGG + chr4.3:66873732-66873751 MS.gene93921:intron 40.0%
GAAATAGAGAACATTGGGAG+GGG - chr4.3:66874474-66874493 None:intergenic 40.0%
GAGGGTAGCTTAAGAATCAT+GGG - chr4.3:66872234-66872253 None:intergenic 40.0%
GGATAGGGAATAATATGTCG+TGG + chr4.3:66875061-66875080 MS.gene93921:intron 40.0%
GGGAATAATATGTCGTGGTA+GGG + chr4.3:66875066-66875085 MS.gene93921:intron 40.0%
GGGTCTCACAATACACAATA+CGG - chr4.3:66871942-66871961 None:intergenic 40.0%
GTAAGTTATGCTGTTCGATG+TGG + chr4.3:66874737-66874756 MS.gene93921:intron 40.0%
GTATGCGATACTTGTGTTGA+CGG + chr4.3:66875000-66875019 MS.gene93921:intron 40.0%
GTCCACACACAATATCAACT+TGG - chr4.3:66873814-66873833 None:intergenic 40.0%
TAACATCACTCTCCACCTAA+TGG - chr4.3:66874831-66874850 None:intergenic 40.0%
TCAAGAACTTGTGCCAAACA+TGG + chr4.3:66873120-66873139 MS.gene93921:CDS 40.0%
TCTGTTATAAGTGGGAGAAC+AGG + chr4.3:66875118-66875137 MS.gene93921:intron 40.0%
TGAGGGTAGCTTAAGAATCA+TGG - chr4.3:66872235-66872254 None:intergenic 40.0%
TTCTTCTTTGGCGGAATTCA+CGG + chr4.3:66874946-66874965 MS.gene93921:intron 40.0%
TTGACAGATGTAGGAGTAAG+TGG - chr4.3:66871688-66871707 None:intergenic 40.0%
! AGTTAGTAACCGTTTGGGTT+GGG + chr4.3:66875174-66875193 MS.gene93921:intron 40.0%
! ATTGTATTGGAGGAGGGTAT+TGG - chr4.3:66874388-66874407 None:intergenic 40.0%
! CGAGTCATGCTATTTGTTAC+AGG + chr4.3:66874857-66874876 MS.gene93921:intron 40.0%
! CTTTGTTTGTGAGTTTGGAG+GGG - chr4.3:66874540-66874559 None:intergenic 40.0%
! GCATTTGATCTGGGATTACA+TGG + chr4.3:66875226-66875245 MS.gene93921:intron 40.0%
! TTGATATTGTGTGTGGACTG+TGG + chr4.3:66873816-66873835 MS.gene93921:intron 40.0%
! TTGTTGTTATGTAGGTTCGG+AGG + chr4.3:66873068-66873087 MS.gene93921:intron 40.0%
!! ATCCAAGGAGTATTGCTGAA+AGG + chr4.3:66872946-66872965 MS.gene93921:CDS 40.0%
!! GCTTTGTTTGTGAGTTTGGA+GGG - chr4.3:66874541-66874560 None:intergenic 40.0%
!! TCCAAGGAGTATTGCTGAAA+GGG + chr4.3:66872947-66872966 MS.gene93921:CDS 40.0%
!! TGCTTTGTTTGTGAGTTTGG+AGG - chr4.3:66874542-66874561 None:intergenic 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG + chr4.3:66874168-66874187 MS.gene93921:intron 40.0%
!! TTGTATTGGAGGAGGGTATT+GGG - chr4.3:66874387-66874406 None:intergenic 40.0%
AAATGAGAATGTAGGCCCAG+TGG + chr4.3:66874779-66874798 MS.gene93921:intron 45.0%
ACCCTTTCAGCAATACTCCT+TGG - chr4.3:66872951-66872970 None:intergenic 45.0%
ACTGTCTGATTCTGATTGGG+CGG + chr4.3:66873736-66873755 MS.gene93921:intron 45.0%
AGGTTCAAATCTGGACCATG+TGG - chr4.3:66873671-66873690 None:intergenic 45.0%
AGTGTTTCATCTCTTCTGCG+AGG + chr4.3:66875202-66875221 MS.gene93921:intron 45.0%
AGTTGCACAAGTCCATTAGG+TGG + chr4.3:66874816-66874835 MS.gene93921:intron 45.0%
ATGTAGGCCCAGTGGTAAAT+TGG + chr4.3:66874787-66874806 MS.gene93921:intron 45.0%
CAACTTGGCGGAATTGGATT+AGG - chr4.3:66873799-66873818 None:intergenic 45.0%
CAGTTAGTAACCGTTTGGGT+TGG + chr4.3:66875173-66875192 MS.gene93921:intron 45.0%
CATTCGACACACCAACAACA+TGG - chr4.3:66872095-66872114 None:intergenic 45.0%
CGCTTTGCTCGAATCTTACA+CGG - chr4.3:66872912-66872931 None:intergenic 45.0%
GACACGGTTTAACTCAACTC+CGG + chr4.3:66871486-66871505 MS.gene93921:CDS 45.0%
TAAGCTACCCTCATGAGTCA+TGG + chr4.3:66872242-66872261 MS.gene93921:intron 45.0%
TACCGCAGAGATGTTAGATG+AGG + chr4.3:66875349-66875368 MS.gene93921:CDS 45.0%
TCTTCTTTGGCGGAATTCAC+GGG + chr4.3:66874947-66874966 MS.gene93921:intron 45.0%
TGATTGGATGCCCATGTTGT+TGG + chr4.3:66872081-66872100 MS.gene93921:intron 45.0%
TGTAAGATTCGAGCAAAGCG+TGG + chr4.3:66872912-66872931 MS.gene93921:CDS 45.0%
TTTGTGAGTTTGGAGGGGAA+GGG - chr4.3:66874535-66874554 None:intergenic 45.0%
! AAAACTAGCAAGTTGGGACC+AGG + chr4.3:66873581-66873600 MS.gene93921:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + chr4.3:66874173-66874192 MS.gene93921:intron 45.0%
!! AGGGGAGAGCTTTGGAATAA+AGG - chr4.3:66874512-66874531 None:intergenic 45.0%
!! CGCCAAGTTGATATTGTGTG+TGG + chr4.3:66873809-66873828 MS.gene93921:intron 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + chr4.3:66874172-66874191 MS.gene93921:intron 45.0%
!! GTGGATTTGCTACTCATCCA+AGG + chr4.3:66872931-66872950 MS.gene93921:CDS 45.0%
!! TGTATTGGAGGAGGGTATTG+GGG - chr4.3:66874386-66874405 None:intergenic 45.0%
AACGATTCGAACCAACTCGC+CGG - chr4.3:66871508-66871527 None:intergenic 50.0%
AAGTGGGAGAACAGGAGAGA+GGG + chr4.3:66875126-66875145 MS.gene93921:intron 50.0%
AATAACGTTGCTGCTGGCCA+TGG + chr4.3:66871607-66871626 MS.gene93921:CDS 50.0%
ACTCAGGAGTTGAAGGACCA+GGG - chr4.3:66871633-66871652 None:intergenic 50.0%
ATACTCGGCCATGACTCATG+AGG - chr4.3:66872253-66872272 None:intergenic 50.0%
ATAGAGAACATTGGGAGGGG+AGG - chr4.3:66874471-66874490 None:intergenic 50.0%
CGCAGAGATGTTAGATGAGG+CGG + chr4.3:66875352-66875371 MS.gene93921:CDS 50.0%
CGCCTCATCTAACATCTCTG+CGG - chr4.3:66875354-66875373 None:intergenic 50.0%
CGGATAGACATGCGTTGTGT+CGG + chr4.3:66871845-66871864 MS.gene93921:intron 50.0%
GGATGAGACTCAGGAGTTGA+AGG - chr4.3:66871640-66871659 None:intergenic 50.0%
GTTTGTGAGTTTGGAGGGGA+AGG - chr4.3:66874536-66874555 None:intergenic 50.0%
TAAGTGGGAGAACAGGAGAG+AGG + chr4.3:66875125-66875144 MS.gene93921:intron 50.0%
TACTCGGCCATGACTCATGA+GGG - chr4.3:66872252-66872271 None:intergenic 50.0%
TAGAGAACATTGGGAGGGGA+GGG - chr4.3:66874470-66874489 None:intergenic 50.0%
TCGATGTGGCAGTGTCTGTT+AGG + chr4.3:66874751-66874770 MS.gene93921:intron 50.0%
TTAACTCAACTCCGGCGAGT+TGG + chr4.3:66871494-66871513 MS.gene93921:CDS 50.0%
! ACCATGTGGTCTTGATCGGA+CGG - chr4.3:66873657-66873676 None:intergenic 50.0%
! CTGGACCATGTGGTCTTGAT+CGG - chr4.3:66873661-66873680 None:intergenic 50.0%
! GGCTTAGTGGGTGTAAAGAG+CGG + chr4.3:66874968-66874987 MS.gene93921:intron 50.0%
!! ATGCAACCTGTTTCTGGTGG+TGG + chr4.3:66871454-66871473 MS.gene93921:CDS 50.0%
!! CTGCGAGGAGCATTTGATCT+GGG + chr4.3:66875217-66875236 MS.gene93921:intron 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + chr4.3:66874171-66874190 MS.gene93921:intron 50.0%
!! GTATTGGAGGAGGGTATTGG+GGG - chr4.3:66874385-66874404 None:intergenic 50.0%
!! TATTGGAGGAGGGTATTGGG+GGG - chr4.3:66874384-66874403 None:intergenic 50.0%
!! TCTGCGAGGAGCATTTGATC+TGG + chr4.3:66875216-66875235 MS.gene93921:intron 50.0%
AACAGGAGAGAGGGAAGGGA+GGG + chr4.3:66875135-66875154 MS.gene93921:intron 55.0%
ATATGTCGTGGTAGGGAGCG+AGG + chr4.3:66875073-66875092 MS.gene93921:intron 55.0%
CACTCTCTGCCCAACCCAAA+CGG - chr4.3:66875186-66875205 None:intergenic 55.0%
CTGTGCAGTCAGCATGCTCA+AGG + chr4.3:66873631-66873650 MS.gene93921:intron 55.0%
GACTCAGGAGTTGAAGGACC+AGG - chr4.3:66871634-66871653 None:intergenic 55.0%
GCGGAATTCACGGGCTTAGT+GGG + chr4.3:66874956-66874975 MS.gene93921:intron 55.0%
GGAGAACAGGAGAGAGGGAA+GGG + chr4.3:66875131-66875150 MS.gene93921:intron 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG + chr4.3:66874177-66874196 MS.gene93921:intron 55.0%
TATGTCGTGGTAGGGAGCGA+GGG + chr4.3:66875074-66875093 MS.gene93921:intron 55.0%
TGAGTTTGGAGGGGAAGGGA+GGG - chr4.3:66874531-66874550 None:intergenic 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG + chr4.3:66874176-66874195 MS.gene93921:intron 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG + chr4.3:66874178-66874197 MS.gene93921:intron 55.0%
!! CAACCTGTTTCTGGTGGTGG+TGG + chr4.3:66871457-66871476 MS.gene93921:CDS 55.0%
!! GTGGTGGTGGTGGTTTGACA+CGG + chr4.3:66871470-66871489 MS.gene93921:CDS 55.0%
!!! AGGAGGGTATTGGGGGGTTT+TGG - chr4.3:66874378-66874397 None:intergenic 55.0%
!!! AGGGTATTGGGGGGTTTTGG+AGG - chr4.3:66874375-66874394 None:intergenic 55.0%
!!! GGGTATTGGGGGGTTTTGGA+GGG - chr4.3:66874374-66874393 None:intergenic 55.0%
ACATTGGGAGGGGAGGGCTT+TGG - chr4.3:66874464-66874483 None:intergenic 60.0%
AGGGAGCGAGGGTGAGCAAA+TGG + chr4.3:66875085-66875104 MS.gene93921:intron 60.0%
CATTGGGAGGGGAGGGCTTT+GGG - chr4.3:66874463-66874482 None:intergenic 60.0%
CCACCACCACCACCAGAAAC+AGG - chr4.3:66871463-66871482 None:intergenic 60.0%
GAACAGGAGAGAGGGAAGGG+AGG + chr4.3:66875134-66875153 MS.gene93921:intron 60.0%
GAGTTGAAGGACCAGGGCCA+TGG - chr4.3:66871627-66871646 None:intergenic 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG - chr4.3:66874530-66874549 None:intergenic 60.0%
GAGTTTGGAGGGGAGGGGAA+GGG + chr4.3:66874183-66874202 MS.gene93921:intron 60.0%
GCCGTCCGATCAAGACCACA+TGG + chr4.3:66873653-66873672 MS.gene93921:intron 60.0%
GGCGGAATTCACGGGCTTAG+TGG + chr4.3:66874955-66874974 MS.gene93921:intron 60.0%
GGGAGAACAGGAGAGAGGGA+AGG + chr4.3:66875130-66875149 MS.gene93921:intron 60.0%
GTGAGTTTGGAGGGGAAGGG+AGG - chr4.3:66874532-66874551 None:intergenic 60.0%
! AGAGAGGGAAGGGAGGGCAT+TGG + chr4.3:66875141-66875160 MS.gene93921:intron 60.0%
!! CCTGTTTCTGGTGGTGGTGG+TGG + chr4.3:66871460-66871479 MS.gene93921:CDS 60.0%
GGAGTTTGGAGGGGAGGGGA+AGG + chr4.3:66874182-66874201 MS.gene93921:intron 65.0%
GGGAAGGGAGGGGAGAGCTT+TGG - chr4.3:66874520-66874539 None:intergenic 65.0%
TTGGAGGGGAGGGGAAGGGA+GGG + chr4.3:66874187-66874206 MS.gene93921:intron 65.0%
TTTGGAGGGGAGGGGAAGGG+AGG + chr4.3:66874186-66874205 MS.gene93921:intron 65.0%
!! GGGGAAGGGAGGGCTTTGGA+AGG + chr4.3:66874197-66874216 MS.gene93921:intron 65.0%
GGGAGGGGAAGGGAGGGCTT+TGG + chr4.3:66874193-66874212 MS.gene93921:intron 70.0%
GTTGCTGCTGGCCATGGCCC+TGG + chr4.3:66871613-66871632 MS.gene93921:CDS 70.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 66871454 66875569 66871454 ID=MS.gene93921
chr4.3 mRNA 66871454 66875569 66871454 ID=MS.gene93921.t1;Parent=MS.gene93921
chr4.3 exon 66871454 66871732 66871454 ID=MS.gene93921.t1.exon1;Parent=MS.gene93921.t1
chr4.3 CDS 66871454 66871732 66871454 ID=cds.MS.gene93921.t1;Parent=MS.gene93921.t1
chr4.3 exon 66872846 66872968 66872846 ID=MS.gene93921.t1.exon2;Parent=MS.gene93921.t1
chr4.3 CDS 66872846 66872968 66872846 ID=cds.MS.gene93921.t1;Parent=MS.gene93921.t1
chr4.3 exon 66873082 66873147 66873082 ID=MS.gene93921.t1.exon3;Parent=MS.gene93921.t1
chr4.3 CDS 66873082 66873147 66873082 ID=cds.MS.gene93921.t1;Parent=MS.gene93921.t1
chr4.3 exon 66875341 66875409 66875341 ID=MS.gene93921.t1.exon4;Parent=MS.gene93921.t1
chr4.3 CDS 66875341 66875409 66875341 ID=cds.MS.gene93921.t1;Parent=MS.gene93921.t1
chr4.3 exon 66875522 66875569 66875522 ID=MS.gene93921.t1.exon5;Parent=MS.gene93921.t1
chr4.3 CDS 66875522 66875569 66875522 ID=cds.MS.gene93921.t1;Parent=MS.gene93921.t1
Gene Sequence

>MS.gene93921

ATGCAACCTGTTTCTGGTGGTGGTGGTGGTTTGACACGGTTTAACTCAACTCCGGCGAGTTGGTTCGAATCGTTTATTCTTAAAGAAGAAGATGAAGTTGATGAAAGACAACAACAAGATCACAACTTAAGTTTTACTCAACTGCTTTCTAATAATAACGTTGCTGCTGGCCATGGCCCTGGTCCTTCAACTCCTGAGTCTCATCCATATTTATCTGACTATTACTCTTCACCACTTACTCCTACATCTGTCAATGTTGCTAATAATCCTTTCACTCAGGTACTTTACTTACTTTATTATTGTTCAGTCTGGAATCCGTATTTACTTGATTTATCTATCTTTATTTACTCTTCATTTATGAGAGATAGACATACGAAACACGAACACTTATCGGATAGACATGCGTTGTGTCGGACATCGACACATATAATTACATTGAATTATTTGATTTTCTCAAATTATTAACGATGTCGGCGTGTCAGTGTCCGTATTGTGTATTGTGAGACCCTGTTTGCCATTTAATAAATGGGGTCTTGCTAATATTCTACTTGTGTATTGTGAGCATGTAGATATTTTTAGTAACGTTTTAGTAGGAATTAAATAACAAAATGATATTAACATGTGATTTGATTGGATGCCCATGTTGTTGGTGTGTCGAATGAGAGTTAGAAGCCCAATATTAGATGGAGAGAGAGAGGAAACGTATATCGAATACATTCAAGTCTTCGGTAAAGATGTGATGTCCAATTCACTTACTTGGTTGCTTCTGAGTTTTGACCCATGATTCTTAAGCTACCCTCATGAGTCATGGCCGAGTATGTATAACATAGTTTTACAACTGTTAGGTGCGTAATAATTAATTCTATGTATGAAAATTGAGTGAGCAATCATTTTGATTCTTTAAATTTTAAGTGTTGGTCACACAATTTAGCCTCTCAAATTTGCGAAGTATCAATTTAGTCCATTAACTTAATACAGTGCTAATCAATTTAGCTATTTTTCTAAATTTAAACCACTATCTTAAATGTTCTATTTAAATCTTCTGTGTTTGTCTTAATGCAGCAAAAAAGTATTCAAATATTCAAGACAATATGAGACTGTTCGAGCACGAAAAACACCTAAGAATTACTTATAAGGAGGATTGACTAAACCAAAAGATATTCATATTGTTACAGAAAGATGATAGGAATTAAGTTATCTATATATAATATACTAATATGGAGGTGTTATTATAGTGACATGGAGGACTATAACAGAACATAATGAGGTTGTTTGATACATGTAAAACACTACTTAGTGAGCAAATACTTTCGTTTTTGTTCTTATTCCTTATTGGGAAAACAATTCAACTATTATTGAATTAACATGTTCTGTATTTTTGTGTGTTTAAAGGGAGTTGATGATAGTGGTATAGCAATTGACCTTAAAATGGACAAAATTTTAGAGGGTTCAGTTCCGTGTAAGATTCGAGCAAAGCGTGGATTTGCTACTCATCCAAGGAGTATTGCTGAAAGGGTAACTCTCTTTACTTGTCATAATGCTAATACTAATTTGGGATTTGCTTAGTCATTTGCCTAATCCAAATTGGGTGAACTTTTTCTGTTTTTGAGTTTCTTGTTGTTATGTAGGTTCGGAGGACTCGTATTAGTGATCGCATAAGAAAACTTCAAGAACTTGTGCCAAACATGGATAAGGTTTAGCTTTTCATCTTAAACCACTATAACATGTTTGTTTAATGGTTTTTATTACCATGAAATGATTTTGTTCAAGTTGTTATTTACCATACATTATGCTTTGTATCTTTTAACAGCAAGCAAGATGATGAATTGTCATAAGCATAACCTTTCTTTTCTTTTATTACATGTGAGGTTTTGAGTGAAATTTACTTGGAAAGATATTGCAATGATTATTTAATTCATCTATGATCAACGTGTGTTGTGTTTTATGATCGGTAATTCTTTCACTTTTGAGTAGTGTCTTAACTGTGAAGAAAAGTTCTGCATCCACTTAACTACCCTTTCTCTTTGAATTTGAAGTTAATTATTGACATAATGACATTGGTTAAGGAAACAAATTTAGAAAGTACTAATTGGGGATATTAAATTTTCCTTAAAAGTTCCTTTACTCAAAACTAGCAAGTTGGGACCAGGTTTCTGTGTAGTTGAAAAGCAGTGCAGCTGTGCAGTCAGCATGCTCAAGGCCGTCCGATCAAGACCACATGGTCCAGATTTGAACCTCAGAATTTTATATTAAACAAACATAAAAACAGTCTTGATATCTGAACTGTCTGATTCTGATTGGGCGGTTCTAACGTGCTGACTGCATACAATCATATGACTGCACCTAATCCAATTCCGCCAAGTTGATATTGTGTGTGGACTGTGGAGTAGAAAAGAGATGTTCTTTACTATTTGAATAAATCAGCAATCCGAAAAATGCCAGAATGTATACGCTGAATTTAAGTCCAACTTAACTACAAATCCTTAGGTTTTAATCCCCTTTTATACTTTTTATTCAGGTTCTTTTTGCTATGTGTAAGTTTATTAGAAAATTTCCACTTTTGCAGTAACCTTAATGATTGAGAGATATCAAAAATCATAAATGTGAGGTAACCTTGTCTGATATGTCTCCGTTTTTGCCCAAACATCATGTTTGGACTTTTTGGAAGGTGAAGTCTTCGTCTATGTAAACACAGACACGTTTGGACTACAATCTTAGGCTTTGTTTGGGAGTTTGGAGGGGAGGGGAAGGGAGGGCTTTGGAAGGTGAGAAATATAGGGGAAAATAGATAAATCTTTCACATTTTTGGGAAGAGTATTTTTTTTTAGAGAATGATAAATTAATGCTTATGATTAATATATTTTTAATTTTAAAAATATTATAACAACATAAATTAAATTTGAAGGATTCATATAAACCCTCCAAAACCCCCCAATACCCTCCTCCAATACAATTTTTGAGTTCTCCCAAATGAGGATGATTTTGTATTATGAAGAAAAATGAACTCCCAAAGCCCTCCCCTCCCAATGTTCTCTATTTCTTTCACTTGCTCATTCCTTTATTCCAAAGCTCTCCCCTCCCTTCCCCTCCAAACTCACAAACAAAGCATTAAGGTAGTGGATACTATGTAACTAATATGGTCATAGAAGCAGCAAAAGTTTTGTCCCCTGACTTTATTTATCTTTTGTTATAGAAATTGTATATGCAGAAGCACTTATATAATATTTGATTTAGAAACAGCTATGAATGTCTCTAAAGCTTAGTTTGTCGTTTCTATTTTCTAGTAAGTTATGCTGTTCGATGTGGCAGTGTCTGTTAGGATCTCAAATGAGAATGTAGGCCCAGTGGTAAATTGGCTAACTAGTTGCACAAGTCCATTAGGTGGAGAGTGATGTTATCAAAACGAGTCATGCTATTTGTTACAGGTCCTTTTAGAAACGAAAGACATGAATTAGTAAGCGTGAATGTGTGAAAAATATTGACACTATTAATTTCTTCTTTGGCGGAATTCACGGGCTTAGTGGGTGTAAAGAGCGGTAGAGATTAGTATGCGATACTTGTGTTGACGGTTTCGTAAAAATAAGCATTTCTCTATCAAAATATAGGAGGATAGGGAATAATATGTCGTGGTAGGGAGCGAGGGTGAGCAAATGGTGTGACCAATTCTGTTATAAGTGGGAGAACAGGAGAGAGGGAAGGGAGGGCATTGGATATTTTTGCAGTTAGTAACCGTTTGGGTTGGGCAGAGAGTGTTTCATCTCTTCTGCGAGGAGCATTTGATCTGGGATTACATGGGTTTATCTTCTATAATATCTTCTTTTTTCATCAATAATACAATTTCATTTTCTCTCTTAATTGCGGTTCCTAAGTTTCTTTTGTTCTTGTAGCAAACAAATACCGCAGAGATGTTAGATGAGGCGGTAGCTTATGTCAAGTTTCTACAGAATCAAATTGAGGTAATCTTTTGTGTGTGACTAAATTTATGCTTGTCATTTGGTATTCGGTACTCTCTGCATTTTGTCACGCACTAAGTTGTTGACTAATCTTGCATGAATTGATACATTACAGGAACTATCAGAACAGCAAAGGAGGTGTAAATGCACGATTCCCGAGTAA
Protein sequence

>MS.gene93921.t1

MQPVSGGGGGLTRFNSTPASWFESFILKEEDEVDERQQQDHNLSFTQLLSNNNVAAGHGPGPSTPESHPYLSDYYSSPLTPTSVNVANNPFTQGVDDSGIAIDLKMDKILEGSVPCKIRAKRGFATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKFLQNQIEELSEQQRRCKCTIPE