Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93939.t1 | RHN72439.1 | 40.7 | 671 | 177 | 2 | 166 | 615 | 58 | 728 | 4.50E-135 | 491.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93939.t1 | Q9SZL8 | 35.0 | 183 | 115 | 4 | 187 | 367 | 77 | 257 | 6.6e-18 | 94.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93939.t1 | A0A396J342 | 40.7 | 671 | 177 | 2 | 166 | 615 | 58 | 728 | 3.2e-135 | 491.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene93939.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93939.t1 | MTR_7g028855 | 64.832 | 327 | 50 | 5 | 1 | 326 | 1 | 263 | 1.66e-128 | 387 |
| MS.gene93939.t1 | MTR_7g446520 | 61.709 | 316 | 48 | 5 | 55 | 370 | 15 | 257 | 7.93e-118 | 354 |
| MS.gene93939.t1 | MTR_7g446480 | 48.919 | 370 | 69 | 9 | 1 | 370 | 1 | 250 | 1.60e-91 | 286 |
| MS.gene93939.t1 | MTR_7g446510 | 83.784 | 111 | 18 | 0 | 260 | 370 | 155 | 265 | 7.02e-57 | 196 |
| MS.gene93939.t1 | MTR_7g446510 | 54.217 | 166 | 45 | 3 | 379 | 544 | 23 | 157 | 5.74e-42 | 155 |
| MS.gene93939.t1 | MTR_1g070355 | 33.500 | 200 | 130 | 2 | 185 | 383 | 76 | 273 | 8.12e-28 | 118 |
| MS.gene93939.t1 | MTR_5g076070 | 31.343 | 201 | 137 | 1 | 145 | 345 | 16 | 215 | 5.69e-27 | 111 |
| MS.gene93939.t1 | MTR_8g467420 | 48.193 | 83 | 42 | 1 | 166 | 247 | 61 | 143 | 7.61e-20 | 87.4 |
| MS.gene93939.t1 | MTR_6g022080 | 24.419 | 172 | 130 | 0 | 174 | 345 | 76 | 247 | 2.51e-17 | 82.4 |
| MS.gene93939.t1 | MTR_8g468460 | 45.918 | 98 | 51 | 2 | 382 | 478 | 9 | 105 | 2.70e-17 | 78.2 |
| MS.gene93939.t1 | MTR_0645s0010 | 48.750 | 80 | 41 | 0 | 355 | 434 | 15 | 94 | 9.75e-17 | 77.4 |
| MS.gene93939.t1 | MTR_6g051425 | 27.363 | 201 | 141 | 4 | 191 | 387 | 25 | 224 | 4.02e-15 | 77.4 |
| MS.gene93939.t1 | MTR_0402s0040 | 32.022 | 178 | 109 | 4 | 187 | 359 | 30 | 200 | 1.56e-14 | 77.0 |
| MS.gene93939.t1 | MTR_6g053140 | 29.630 | 162 | 95 | 2 | 115 | 276 | 47 | 189 | 9.95e-14 | 71.2 |
| MS.gene93939.t1 | MTR_3g448650 | 41.250 | 80 | 47 | 0 | 179 | 258 | 78 | 157 | 1.11e-12 | 67.4 |
| MS.gene93939.t1 | MTR_2g098880 | 40.777 | 103 | 59 | 2 | 177 | 278 | 55 | 156 | 1.27e-12 | 68.6 |
| MS.gene93939.t1 | MTR_2g098880 | 40.777 | 103 | 59 | 2 | 177 | 278 | 67 | 168 | 1.53e-12 | 68.6 |
| MS.gene93939.t1 | MTR_0060s0090 | 36.250 | 80 | 51 | 0 | 186 | 265 | 59 | 138 | 2.44e-12 | 65.5 |
| MS.gene93939.t1 | MTR_3g080590 | 48.276 | 58 | 30 | 0 | 176 | 233 | 98 | 155 | 8.74e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93939.t1 | AT4G38180 | 34.973 | 183 | 115 | 4 | 187 | 367 | 77 | 257 | 1.45e-16 | 84.3 |
| MS.gene93939.t1 | AT4G38180 | 28.856 | 201 | 135 | 5 | 366 | 563 | 483 | 678 | 2.52e-16 | 83.6 |
| MS.gene93939.t1 | AT4G38170 | 26.943 | 193 | 126 | 6 | 341 | 520 | 210 | 400 | 1.46e-13 | 74.3 |
| MS.gene93939.t1 | AT1G10240 | 28.261 | 230 | 153 | 5 | 165 | 383 | 24 | 252 | 1.19e-12 | 71.6 |
| MS.gene93939.t1 | AT1G10240 | 28.261 | 230 | 153 | 5 | 165 | 383 | 24 | 252 | 1.19e-12 | 71.6 |
| MS.gene93939.t1 | AT3G22170 | 24.859 | 177 | 128 | 2 | 369 | 545 | 469 | 640 | 2.22e-12 | 70.9 |
| MS.gene93939.t1 | AT3G22170 | 24.859 | 177 | 128 | 2 | 369 | 545 | 469 | 640 | 2.22e-12 | 70.9 |
| MS.gene93939.t1 | AT4G15090 | 25.806 | 186 | 134 | 2 | 369 | 554 | 460 | 641 | 3.05e-12 | 70.5 |
| MS.gene93939.t1 | AT4G15090 | 25.688 | 218 | 153 | 7 | 187 | 401 | 55 | 266 | 8.47e-11 | 65.9 |
| MS.gene93939.t1 | AT4G15090 | 25.806 | 186 | 134 | 2 | 369 | 554 | 460 | 641 | 3.05e-12 | 70.5 |
| MS.gene93939.t1 | AT4G15090 | 25.688 | 218 | 153 | 7 | 187 | 401 | 55 | 266 | 8.47e-11 | 65.9 |
| MS.gene93939.t1 | AT4G15090 | 25.806 | 186 | 134 | 2 | 369 | 554 | 460 | 641 | 3.05e-12 | 70.5 |
| MS.gene93939.t1 | AT4G15090 | 25.688 | 218 | 153 | 7 | 187 | 401 | 55 | 266 | 8.47e-11 | 65.9 |
| MS.gene93939.t1 | AT4G15090 | 25.806 | 186 | 134 | 2 | 369 | 554 | 460 | 641 | 3.05e-12 | 70.5 |
| MS.gene93939.t1 | AT4G15090 | 25.688 | 218 | 153 | 7 | 187 | 401 | 55 | 266 | 8.47e-11 | 65.9 |
| MS.gene93939.t1 | AT4G15090 | 25.806 | 186 | 134 | 2 | 369 | 554 | 460 | 641 | 3.05e-12 | 70.5 |
| MS.gene93939.t1 | AT4G15090 | 25.688 | 218 | 153 | 7 | 187 | 401 | 55 | 266 | 8.47e-11 | 65.9 |
| MS.gene93939.t1 | AT2G27110 | 27.222 | 180 | 124 | 4 | 369 | 545 | 429 | 604 | 8.93e-12 | 68.9 |
| MS.gene93939.t1 | AT2G27110 | 27.222 | 180 | 124 | 4 | 369 | 545 | 429 | 604 | 8.93e-12 | 68.9 |
| MS.gene93939.t1 | AT2G27110 | 27.222 | 180 | 124 | 4 | 369 | 545 | 284 | 459 | 1.21e-11 | 68.2 |
Find 113 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAATGACTTTACGGATTT+TGG | 0.057115 | 4.3:+66453853 | MS.gene93939:CDS |
| TGTTCATTACAAACCCAAAA+AGG | 0.236191 | 4.3:+66454629 | MS.gene93939:CDS |
| AATAAGAACTTGTCATATAA+TGG | 0.240494 | 4.3:+66454788 | MS.gene93939:CDS |
| ATCCTTCTCCCACGTCTCTT+TGG | 0.296957 | 4.3:-66456441 | None:intergenic |
| CTAGTAACAATTGGAACTTC+AGG | 0.299717 | 4.3:-66456235 | None:intergenic |
| TTTGTTGCGTTGGACGAAAA+AGG | 0.308114 | 4.3:+66456030 | MS.gene93939:CDS |
| TTGCAGGGAAGTGTCCAAAA+AGG | 0.313369 | 4.3:+66456153 | MS.gene93939:CDS |
| AGTGATGATGGTGGTTGTTC+TGG | 0.317361 | 4.3:+66454078 | MS.gene93939:CDS |
| CATTAACTGCTGAAGGAATA+AGG | 0.318241 | 4.3:+66454373 | MS.gene93939:CDS |
| TGCTGAAGGAATAAGGAAAA+TGG | 0.318497 | 4.3:+66454380 | MS.gene93939:CDS |
| AAACAACAACAATGACTTTA+CGG | 0.325210 | 4.3:+66453846 | MS.gene93939:CDS |
| CTGTTAGGAAGAGTGATATT+AGG | 0.340554 | 4.3:+66454466 | MS.gene93939:CDS |
| CGCAACAAAATCAAACATTC+TGG | 0.341835 | 4.3:-66456016 | None:intergenic |
| TTCTCTAAAGAAGAAGAAAA+AGG | 0.360309 | 4.3:+66456309 | MS.gene93939:CDS |
| AAGAGTTATGTTAGGAAGAA+AGG | 0.363884 | 4.3:+66455596 | MS.gene93939:intron |
| CATTAGTTGGAGTAGGTTCA+TGG | 0.371918 | 4.3:-66454689 | None:intergenic |
| CCCACGTCTCTTTGGCTATC+GGG | 0.373225 | 4.3:-66456433 | None:intergenic |
| ATAAGAACTTGTCATATAAT+GGG | 0.396367 | 4.3:+66454789 | MS.gene93939:CDS |
| TTGATAGAGATTGCTCGATA+TGG | 0.396982 | 4.3:+66456103 | MS.gene93939:CDS |
| GTTGAGTTTCTAGTAACAAT+TGG | 0.399158 | 4.3:-66456244 | None:intergenic |
| TCCCACGTCTCTTTGGCTAT+CGG | 0.401616 | 4.3:-66456434 | None:intergenic |
| AGCATTTATCAAGGTTAGAT+AGG | 0.409294 | 4.3:+66454556 | MS.gene93939:CDS |
| GCTCAGAAGGGTGGATATCC+TGG | 0.409450 | 4.3:+66454822 | MS.gene93939:CDS |
| GGATGACATACAAAAGCTTC+AGG | 0.411801 | 4.3:+66456198 | MS.gene93939:CDS |
| GAAATATATCCGATCATTGT+TGG | 0.417536 | 4.3:+66453922 | MS.gene93939:CDS |
| GAATATAGTGCTGGTGATAA+AGG | 0.418665 | 4.3:+66454102 | MS.gene93939:CDS |
| GGTACACCAGAACATGATTA+CGG | 0.421572 | 4.3:+66453874 | MS.gene93939:CDS |
| CGAGGCTGCTGAAATCTATA+CGG | 0.432332 | 4.3:+66455748 | MS.gene93939:CDS |
| GTAGAACCGTAATCATGTTC+TGG | 0.434784 | 4.3:-66453880 | None:intergenic |
| AGAGAACCTTTGCACTTCAC+TGG | 0.446156 | 4.3:-66456292 | None:intergenic |
| TAGTAACAATTGGAACTTCA+GGG | 0.456759 | 4.3:-66456234 | None:intergenic |
| AAGGGTGGATATCCTGGTGT+TGG | 0.458467 | 4.3:+66454828 | MS.gene93939:CDS |
| TATAAGTACGGTAAGTGTAA+AGG | 0.460291 | 4.3:+66454438 | MS.gene93939:CDS |
| GGGATACATGGTGGCTCAGA+AGG | 0.464555 | 4.3:+66454809 | MS.gene93939:CDS |
| TAATGAACACGGAGCCTAGC+TGG | 0.468270 | 4.3:-66454615 | None:intergenic |
| GATGAGCGATATGATGAAAC+TGG | 0.468588 | 4.3:+66454045 | MS.gene93939:CDS |
| TCTTGAATGTGGACTATTGT+GGG | 0.469444 | 4.3:+66456065 | MS.gene93939:CDS |
| AAATATATCCGATCATTGTT+GGG | 0.474603 | 4.3:+66453923 | MS.gene93939:CDS |
| AGGGTGGATATCCTGGTGTT+GGG | 0.476260 | 4.3:+66454829 | MS.gene93939:CDS |
| GTAGATAAAGCACAGATTGA+TGG | 0.478198 | 4.3:+66454750 | MS.gene93939:CDS |
| TGATTACGGTTCTACGGATG+TGG | 0.481654 | 4.3:+66453888 | MS.gene93939:CDS |
| CAGCACAGGGGATGAAAACC+TGG | 0.488423 | 4.3:-66455699 | None:intergenic |
| CCTTTGCACTTCACTGGCAA+TGG | 0.488914 | 4.3:-66456286 | None:intergenic |
| TTCTTGAATGTGGACTATTG+TGG | 0.490201 | 4.3:+66456064 | MS.gene93939:CDS |
| CGCAGATGAGTTGTCAGCAC+AGG | 0.491267 | 4.3:-66455713 | None:intergenic |
| AGACGTGGGAGAAGGATCAA+AGG | 0.494945 | 4.3:+66456447 | MS.gene93939:CDS |
| GAGCGAAGAAGCATTTATCA+AGG | 0.496128 | 4.3:+66454547 | MS.gene93939:CDS |
| GCAGTATGTATGCAACAAGC+AGG | 0.502107 | 4.3:+66454518 | MS.gene93939:CDS |
| TGTAGTTGTTGGTGAGGAAA+TGG | 0.504666 | 4.3:+66454338 | MS.gene93939:CDS |
| GAAGATGATGATGTAGTTGT+TGG | 0.505754 | 4.3:+66454327 | MS.gene93939:CDS |
| TGTAAATGCACAGCATTAGT+TGG | 0.506412 | 4.3:-66454702 | None:intergenic |
| GTGAAAGAAGAGATTATGAA+AGG | 0.507624 | 4.3:+66455788 | MS.gene93939:CDS |
| AAGAATACTCAAGGGAATAC+AGG | 0.512005 | 4.3:+66454021 | MS.gene93939:CDS |
| ATAAATTCATTAACTGCTGA+AGG | 0.519495 | 4.3:+66454366 | MS.gene93939:CDS |
| CCGATCATTGTTGGGAGTGG+TGG | 0.525336 | 4.3:+66453931 | MS.gene93939:CDS |
| GACGTGGGAGAAGGATCAAA+GGG | 0.526228 | 4.3:+66456448 | MS.gene93939:CDS |
| GATGAAAGTCAAGGTGTTGA+AGG | 0.526322 | 4.3:+66454147 | MS.gene93939:CDS |
| AGAACATGATTACGGTTCTA+CGG | 0.545109 | 4.3:+66453882 | MS.gene93939:CDS |
| CCACCACTCCCAACAATGAT+CGG | 0.545431 | 4.3:-66453931 | None:intergenic |
| TAGCTTGTATGCAGATGTGC+TGG | 0.548592 | 4.3:+66456177 | MS.gene93939:CDS |
| TTGTCATATAATGGGATACA+TGG | 0.555297 | 4.3:+66454797 | MS.gene93939:CDS |
| TATCCGATCATTGTTGGGAG+TGG | 0.560481 | 4.3:+66453928 | MS.gene93939:CDS |
| AGCCAAAGAGACGTGGGAGA+AGG | 0.560631 | 4.3:+66456439 | MS.gene93939:CDS |
| GAAGATTGGTTTCTTGAATG+TGG | 0.561039 | 4.3:+66456054 | MS.gene93939:CDS |
| TGCAAGAAATTTGAATCTCG+AGG | 0.563863 | 4.3:+66455938 | MS.gene93939:CDS |
| TTCTTAGTGAACCCAACACC+AGG | 0.567834 | 4.3:-66454840 | None:intergenic |
| TTGTTGGTGAGGAAATGGTA+AGG | 0.572827 | 4.3:+66454343 | MS.gene93939:CDS |
| TACATGGTGGCTCAGAAGGG+TGG | 0.573659 | 4.3:+66454813 | MS.gene93939:CDS |
| GCAAGAAATTTGAATCTCGA+GGG | 0.574935 | 4.3:+66455939 | MS.gene93939:CDS |
| GCAGATGAGTTGTCAGCACA+GGG | 0.575960 | 4.3:-66455712 | None:intergenic |
| TGTTCTGGTGAATATAGTGC+TGG | 0.581897 | 4.3:+66454093 | MS.gene93939:CDS |
| TTGACAAAATATCTTGAGGA+AGG | 0.583257 | 4.3:+66455866 | MS.gene93939:CDS |
| CAGTATGTATGCAACAAGCA+GGG | 0.584535 | 4.3:+66454519 | MS.gene93939:CDS |
| GCCCGATAGCCAAAGAGACG+TGG | 0.586320 | 4.3:+66456432 | MS.gene93939:intron |
| GGTGATAAAGGTGAAGATGA+TGG | 0.589452 | 4.3:+66454114 | MS.gene93939:CDS |
| GTTGAAGGTGAACGTGATGA+AGG | 0.592601 | 4.3:+66454162 | MS.gene93939:CDS |
| ATGCGTGCTGTTATTAAGGA+TGG | 0.593265 | 4.3:+66454891 | MS.gene93939:CDS |
| GGAGACAATGAAAGTGATGA+TGG | 0.609236 | 4.3:+66454066 | MS.gene93939:CDS |
| GGATACATGGTGGCTCAGAA+GGG | 0.612576 | 4.3:+66454810 | MS.gene93939:CDS |
| AATCTGTGCTTTATCTACCT+CGG | 0.613894 | 4.3:-66454745 | None:intergenic |
| GATAAACGTGAACGTGATGA+AGG | 0.614288 | 4.3:+66454207 | MS.gene93939:CDS |
| AGTGAAGGTCATGGTAGTGA+AGG | 0.614950 | 4.3:+66454288 | MS.gene93939:CDS |
| TCTGCGTTGTCTTGAACGCG+AGG | 0.617404 | 4.3:+66455730 | MS.gene93939:CDS |
| CCATTGCCAGTGAAGTGCAA+AGG | 0.632835 | 4.3:+66456286 | MS.gene93939:CDS |
| AGTATGTATGCAACAAGCAG+GGG | 0.634341 | 4.3:+66454520 | MS.gene93939:CDS |
| TGTTACTAGAAACTCAACAA+TGG | 0.638790 | 4.3:+66456249 | MS.gene93939:CDS |
| CCCGATAGCCAAAGAGACGT+GGG | 0.644492 | 4.3:+66456433 | MS.gene93939:CDS |
| CTCGTACAAAGTGTCCAGCT+AGG | 0.644688 | 4.3:+66454601 | MS.gene93939:CDS |
| CAAGAAATTTGAATCTCGAG+GGG | 0.648693 | 4.3:+66455940 | MS.gene93939:CDS |
| TGCACAGCATTAGTTGGAGT+AGG | 0.650299 | 4.3:-66454696 | None:intergenic |
| CTGGCAATGGATCATGTATG+TGG | 0.651316 | 4.3:-66456273 | None:intergenic |
| GAAGTTGACAAAATATCTTG+AGG | 0.651334 | 4.3:+66455862 | MS.gene93939:CDS |
| TGATGATGTAGTTGTTGGTG+AGG | 0.665725 | 4.3:+66454332 | MS.gene93939:CDS |
| TTAACAGTGAGATTGTAATG+AGG | 0.666140 | 4.3:+66454496 | MS.gene93939:CDS |
| GGTGATGAAAGTGAAGGTCA+TGG | 0.667300 | 4.3:+66454249 | MS.gene93939:CDS |
| GTTGATGAAAGTGAAGGTCA+TGG | 0.667300 | 4.3:+66454279 | MS.gene93939:CDS |
| TCATATAATGGGATACATGG+TGG | 0.669224 | 4.3:+66454800 | MS.gene93939:CDS |
| GGTGAAAATGATGAAAGTGA+AGG | 0.677460 | 4.3:+66454183 | MS.gene93939:CDS |
| CTTGAATGTGGACTATTGTG+GGG | 0.678410 | 4.3:+66456066 | MS.gene93939:CDS |
| CAAAGGGAGGAAAATCAAAG+AGG | 0.680357 | 4.3:+66456464 | MS.gene93939:CDS |
| GATGATGATGATGTGAGTCA+TGG | 0.683220 | 4.3:+66453988 | MS.gene93939:CDS |
| AAACGTGAACGTGATGAAGG+TGG | 0.684078 | 4.3:+66454210 | MS.gene93939:CDS |
| ACTTTGTACGAGTGAGACGT+CGG | 0.685988 | 4.3:-66454590 | None:intergenic |
| AGGTGTTGCACTGAGTGTGA+AGG | 0.686205 | 4.3:+66455808 | MS.gene93939:CDS |
| CGTGAACGTGATGAAGGTGG+AGG | 0.693067 | 4.3:+66454213 | MS.gene93939:CDS |
| AGTGAAGTTGATGAAAGTGA+AGG | 0.694719 | 4.3:+66454273 | MS.gene93939:CDS |
| GGTGGAGGTGATGAAAGTGA+AGG | 0.700815 | 4.3:+66454228 | MS.gene93939:CDS |
| GACAATGAAAGTGATGATGG+TGG | 0.706532 | 4.3:+66454069 | MS.gene93939:CDS |
| GTGGGAGAAGGATCAAAGGG+AGG | 0.709029 | 4.3:+66456451 | MS.gene93939:CDS |
| TGTTTATCAGAAAATATCCG+AGG | 0.710369 | 4.3:+66454728 | MS.gene93939:CDS |
| AGTGAAGGTGATGAAAGTGA+AGG | 0.717258 | 4.3:+66454243 | MS.gene93939:CDS |
| AGTGAATGTGATGAAAGTCA+AGG | 0.739796 | 4.3:+66454138 | MS.gene93939:CDS |
| CAGATGAGTTGTCAGCACAG+GGG | 0.773409 | 4.3:-66455711 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACGATTTTTATTATAAGTA+CGG | + | chr4.3:66454426-66454445 | MS.gene93939:CDS | 15.0% |
| !! | AAACAATAGAAACTTATATG+TGG | + | chr4.3:66455183-66455202 | MS.gene93939:intron | 20.0% |
| !! | AAATCATAAAGAGTTATGTT+AGG | + | chr4.3:66455588-66455607 | MS.gene93939:intron | 20.0% |
| !! | AACAATAGAAACTTATATGT+GGG | + | chr4.3:66455184-66455203 | MS.gene93939:intron | 20.0% |
| !! | AATAAGAACTTGTCATATAA+TGG | + | chr4.3:66454788-66454807 | MS.gene93939:CDS | 20.0% |
| !! | ATAAGAACTTGTCATATAAT+GGG | + | chr4.3:66454789-66454808 | MS.gene93939:CDS | 20.0% |
| !! | CTTCAACACAAAAAAAATAT+GGG | - | chr4.3:66455975-66455994 | None:intergenic | 20.0% |
| !!! | ACGTTTGAAATGTTTATTTT+GGG | + | chr4.3:66455001-66455020 | MS.gene93939:intron | 20.0% |
| ! | AAACAACAACAATGACTTTA+CGG | + | chr4.3:66453846-66453865 | MS.gene93939:CDS | 25.0% |
| ! | AAATATATCCGATCATTGTT+GGG | + | chr4.3:66453923-66453942 | MS.gene93939:CDS | 25.0% |
| ! | ATAAATTCATTAACTGCTGA+AGG | + | chr4.3:66454366-66454385 | MS.gene93939:CDS | 25.0% |
| ! | ATATGAGAACAAAGAATTGT+GGG | + | chr4.3:66455496-66455515 | MS.gene93939:intron | 25.0% |
| ! | CCTTCAACACAAAAAAAATA+TGG | - | chr4.3:66455976-66455995 | None:intergenic | 25.0% |
| !! | AATTTTACGAAGAATACTCA+AGG | + | chr4.3:66454012-66454031 | MS.gene93939:CDS | 25.0% |
| !! | AGCAATGTACTCTAATTTTA+CGG | + | chr4.3:66455397-66455416 | MS.gene93939:intron | 25.0% |
| !! | ATGTGTTTACAAATTTTTGC+AGG | + | chr4.3:66456137-66456156 | MS.gene93939:CDS | 25.0% |
| !! | ATTTTACGAAGAATACTCAA+GGG | + | chr4.3:66454013-66454032 | MS.gene93939:CDS | 25.0% |
| !! | GAACATTTTCTTACAAACTT+TGG | - | chr4.3:66456337-66456356 | None:intergenic | 25.0% |
| !! | TGTGTTTACAAATTTTTGCA+GGG | + | chr4.3:66456138-66456157 | MS.gene93939:CDS | 25.0% |
| !! | TTCTCTAAAGAAGAAGAAAA+AGG | + | chr4.3:66456309-66456328 | MS.gene93939:CDS | 25.0% |
| !! | TTCTTTGTTCTCATATGTTT+TGG | - | chr4.3:66455492-66455511 | None:intergenic | 25.0% |
| !!! | ATTTCTGCATAATTTTGATG+AGG | + | chr4.3:66455631-66455650 | MS.gene93939:CDS | 25.0% |
| !!! | CCATATTTTTTTTGTGTTGA+AGG | + | chr4.3:66455973-66455992 | MS.gene93939:CDS | 25.0% |
| !!! | GACGTTTGAAATGTTTATTT+TGG | + | chr4.3:66455000-66455019 | MS.gene93939:intron | 25.0% |
| AAGAGTTATGTTAGGAAGAA+AGG | + | chr4.3:66455596-66455615 | MS.gene93939:intron | 30.0% | |
| ACAAAAAAAATATGGGAGCA+TGG | - | chr4.3:66455968-66455987 | None:intergenic | 30.0% | |
| AGCATTTATCAAGGTTAGAT+AGG | + | chr4.3:66454556-66454575 | MS.gene93939:CDS | 30.0% | |
| CAAATATAACTGTTTGTGAG+TGG | - | chr4.3:66455142-66455161 | None:intergenic | 30.0% | |
| CACTCACAAACAGTTATATT+TGG | + | chr4.3:66455140-66455159 | MS.gene93939:intron | 30.0% | |
| CATATGAGAACAAAGAATTG+TGG | + | chr4.3:66455495-66455514 | MS.gene93939:intron | 30.0% | |
| GAAATATATCCGATCATTGT+TGG | + | chr4.3:66453922-66453941 | MS.gene93939:CDS | 30.0% | |
| GAAGTTGACAAAATATCTTG+AGG | + | chr4.3:66455862-66455881 | MS.gene93939:CDS | 30.0% | |
| GAATATTCACAAAAGGAATG+TGG | - | chr4.3:66454966-66454985 | None:intergenic | 30.0% | |
| GTAAGAAAATGTTCAAACTG+TGG | + | chr4.3:66456343-66456362 | MS.gene93939:intron | 30.0% | |
| GTGAAAGAAGAGATTATGAA+AGG | + | chr4.3:66455788-66455807 | MS.gene93939:CDS | 30.0% | |
| GTTCATTACAAACCCAAAAA+GGG | + | chr4.3:66454630-66454649 | MS.gene93939:CDS | 30.0% | |
| TAGTAACAATTGGAACTTCA+GGG | - | chr4.3:66456237-66456256 | None:intergenic | 30.0% | |
| TATAAGTACGGTAAGTGTAA+AGG | + | chr4.3:66454438-66454457 | MS.gene93939:CDS | 30.0% | |
| TGTTACTAGAAACTCAACAA+TGG | + | chr4.3:66456249-66456268 | MS.gene93939:CDS | 30.0% | |
| TGTTCATTACAAACCCAAAA+AGG | + | chr4.3:66454629-66454648 | MS.gene93939:CDS | 30.0% | |
| TGTTTATCAGAAAATATCCG+AGG | + | chr4.3:66454728-66454747 | MS.gene93939:CDS | 30.0% | |
| TTAACAGTGAGATTGTAATG+AGG | + | chr4.3:66454496-66454515 | MS.gene93939:CDS | 30.0% | |
| TTGACAAAATATCTTGAGGA+AGG | + | chr4.3:66455866-66455885 | MS.gene93939:CDS | 30.0% | |
| ! | AAAAATGCGTGCTGTTATTA+AGG | + | chr4.3:66454887-66454906 | MS.gene93939:CDS | 30.0% |
| ! | AACAATGACTTTACGGATTT+TGG | + | chr4.3:66453853-66453872 | MS.gene93939:CDS | 30.0% |
| ! | AATGTACTCTAATTTTACGG+AGG | + | chr4.3:66455400-66455419 | MS.gene93939:intron | 30.0% |
| ! | ACAACATATCTACCCTTTTT+GGG | - | chr4.3:66454645-66454664 | None:intergenic | 30.0% |
| ! | ACCAGTTTTCTAGATTGTAT+GGG | + | chr4.3:66455212-66455231 | MS.gene93939:intron | 30.0% |
| ! | AGGATGAATTTGAAGAGTTT+TGG | + | chr4.3:66455420-66455439 | MS.gene93939:intron | 30.0% |
| ! | CGGATATTTTCTGATAAACA+GGG | - | chr4.3:66454728-66454747 | None:intergenic | 30.0% |
| ! | GATGAATTTGAAGAGTTTTG+GGG | + | chr4.3:66455422-66455441 | MS.gene93939:intron | 30.0% |
| ! | GGATGAATTTGAAGAGTTTT+GGG | + | chr4.3:66455421-66455440 | MS.gene93939:intron | 30.0% |
| ! | TCGGATATTTTCTGATAAAC+AGG | - | chr4.3:66454729-66454748 | None:intergenic | 30.0% |
| ! | TTGTCATATAATGGGATACA+TGG | + | chr4.3:66454797-66454816 | MS.gene93939:CDS | 30.0% |
| !! | AATGTTTGATTTTGTTGCGT+TGG | + | chr4.3:66456020-66456039 | MS.gene93939:CDS | 30.0% |
| !! | AGATCAGATTATTTCTGCTT+TGG | + | chr4.3:66455038-66455057 | MS.gene93939:intron | 30.0% |
| !! | AGTTATATTTGGTGCTACAT+TGG | + | chr4.3:66455151-66455170 | MS.gene93939:intron | 30.0% |
| !! | ATGAATTTGAAGAGTTTTGG+GGG | + | chr4.3:66455423-66455442 | MS.gene93939:intron | 30.0% |
| !! | GTTGAGTTTCTAGTAACAAT+TGG | - | chr4.3:66456247-66456266 | None:intergenic | 30.0% |
| !! | TTGTAGCTGATTTTAAATCC+AGG | + | chr4.3:66455681-66455700 | MS.gene93939:CDS | 30.0% |
| !!! | AAATGTTTATTTTGGGCAGA+TGG | + | chr4.3:66455008-66455027 | MS.gene93939:intron | 30.0% |
| !!! | AAGAATTCAGCTTTTTTGGA+AGG | + | chr4.3:66455365-66455384 | MS.gene93939:intron | 30.0% |
| !!! | GTTGTGTCTATTTTTGAAGA+GGG | + | chr4.3:66454660-66454679 | MS.gene93939:CDS | 30.0% |
| !!! | TGTCAAGAATTCAGCTTTTT+TGG | + | chr4.3:66455361-66455380 | MS.gene93939:intron | 30.0% |
| !!! | TGTTGTGTCTATTTTTGAAG+AGG | + | chr4.3:66454659-66454678 | MS.gene93939:CDS | 30.0% |
| !!! | TTTTGGGTTTGTAATGAACA+CGG | - | chr4.3:66454629-66454648 | None:intergenic | 30.0% |
| AAGAATACTCAAGGGAATAC+AGG | + | chr4.3:66454021-66454040 | MS.gene93939:CDS | 35.0% | |
| AATCTGTGCTTTATCTACCT+CGG | - | chr4.3:66454748-66454767 | None:intergenic | 35.0% | |
| AGAACATGATTACGGTTCTA+CGG | + | chr4.3:66453882-66453901 | MS.gene93939:CDS | 35.0% | |
| AGTGAATGTGATGAAAGTCA+AGG | + | chr4.3:66454138-66454157 | MS.gene93939:CDS | 35.0% | |
| AGTGGCAGAATATTCACAAA+AGG | - | chr4.3:66454973-66454992 | None:intergenic | 35.0% | |
| CAAGAAATTTGAATCTCGAG+GGG | + | chr4.3:66455940-66455959 | MS.gene93939:CDS | 35.0% | |
| CATTAACTGCTGAAGGAATA+AGG | + | chr4.3:66454373-66454392 | MS.gene93939:CDS | 35.0% | |
| CGCAACAAAATCAAACATTC+TGG | - | chr4.3:66456019-66456038 | None:intergenic | 35.0% | |
| CTAGTAACAATTGGAACTTC+AGG | - | chr4.3:66456238-66456257 | None:intergenic | 35.0% | |
| CTGTTAGGAAGAGTGATATT+AGG | + | chr4.3:66454466-66454485 | MS.gene93939:CDS | 35.0% | |
| GCAAGAAATTTGAATCTCGA+GGG | + | chr4.3:66455939-66455958 | MS.gene93939:CDS | 35.0% | |
| GGTGAAAATGATGAAAGTGA+AGG | + | chr4.3:66454183-66454202 | MS.gene93939:CDS | 35.0% | |
| GTAGATAAAGCACAGATTGA+TGG | + | chr4.3:66454750-66454769 | MS.gene93939:CDS | 35.0% | |
| GTGAAGGAAAAAGAAGTGAA+TGG | + | chr4.3:66455824-66455843 | MS.gene93939:CDS | 35.0% | |
| TCCCATACAATCTAGAAAAC+TGG | - | chr4.3:66455216-66455235 | None:intergenic | 35.0% | |
| TGCAAGAAATTTGAATCTCG+AGG | + | chr4.3:66455938-66455957 | MS.gene93939:CDS | 35.0% | |
| TGCTGAAGGAATAAGGAAAA+TGG | + | chr4.3:66454380-66454399 | MS.gene93939:CDS | 35.0% | |
| TGTAAATGCACAGCATTAGT+TGG | - | chr4.3:66454705-66454724 | None:intergenic | 35.0% | |
| TTGATAGAGATTGCTCGATA+TGG | + | chr4.3:66456103-66456122 | MS.gene93939:CDS | 35.0% | |
| ! | CACAACATATCTACCCTTTT+TGG | - | chr4.3:66454646-66454665 | None:intergenic | 35.0% |
| ! | GAAGATGATGATGTAGTTGT+TGG | + | chr4.3:66454327-66454346 | MS.gene93939:CDS | 35.0% |
| ! | GACCAGTTTTCTAGATTGTA+TGG | + | chr4.3:66455211-66455230 | MS.gene93939:intron | 35.0% |
| ! | TCATATAATGGGATACATGG+TGG | + | chr4.3:66454800-66454819 | MS.gene93939:CDS | 35.0% |
| ! | TCTTGAATGTGGACTATTGT+GGG | + | chr4.3:66456065-66456084 | MS.gene93939:CDS | 35.0% |
| ! | TTCTTGAATGTGGACTATTG+TGG | + | chr4.3:66456064-66456083 | MS.gene93939:CDS | 35.0% |
| !! | AATTTTGATGAGGCAATGAG+AGG | + | chr4.3:66455641-66455660 | MS.gene93939:CDS | 35.0% |
| !! | AGTGAAGTTGATGAAAGTGA+AGG | + | chr4.3:66454273-66454292 | MS.gene93939:CDS | 35.0% |
| !! | GAAGATTGGTTTCTTGAATG+TGG | + | chr4.3:66456054-66456073 | MS.gene93939:CDS | 35.0% |
| !! | GAATATAGTGCTGGTGATAA+AGG | + | chr4.3:66454102-66454121 | MS.gene93939:CDS | 35.0% |
| !!! | AGTGTAAAGGTTTTGCTGTT+AGG | + | chr4.3:66454451-66454470 | MS.gene93939:CDS | 35.0% |
| !!! | TCATATGTTTTGGTAACCCA+TGG | - | chr4.3:66455482-66455501 | None:intergenic | 35.0% |
| !!! | TGAATTTGAAGAGTTTTGGG+GGG | + | chr4.3:66455424-66455443 | MS.gene93939:intron | 35.0% |
| ACAAAATCACCAACGGATAG+TGG | - | chr4.3:66455106-66455125 | None:intergenic | 40.0% | |
| AGTATGTATGCAACAAGCAG+GGG | + | chr4.3:66454520-66454539 | MS.gene93939:CDS | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | + | chr4.3:66454243-66454262 | MS.gene93939:CDS | 40.0% | |
| ATTGCCTTGAGAACAATCCA+TGG | + | chr4.3:66455462-66455481 | MS.gene93939:intron | 40.0% | |
| CAAAGGGAGGAAAATCAAAG+AGG | + | chr4.3:66456464-66456483 | MS.gene93939:CDS | 40.0% | |
| CAGTATGTATGCAACAAGCA+GGG | + | chr4.3:66454519-66454538 | MS.gene93939:CDS | 40.0% | |
| CATTAGTTGGAGTAGGTTCA+TGG | - | chr4.3:66454692-66454711 | None:intergenic | 40.0% | |
| CCAAAAGCAGTTGTAACAGA+TGG | + | chr4.3:66455245-66455264 | MS.gene93939:intron | 40.0% | |
| GAACAAATACCACTATCCGT+TGG | + | chr4.3:66455094-66455113 | MS.gene93939:intron | 40.0% | |
| GAATATTCTGCCACTGATGA+CGG | + | chr4.3:66454978-66454997 | MS.gene93939:intron | 40.0% | |
| GATAAACGTGAACGTGATGA+AGG | + | chr4.3:66454207-66454226 | MS.gene93939:CDS | 40.0% | |
| GATGAGCGATATGATGAAAC+TGG | + | chr4.3:66454045-66454064 | MS.gene93939:CDS | 40.0% | |
| GCATCTGAACAAGAATGCTA+TGG | + | chr4.3:66455334-66455353 | MS.gene93939:intron | 40.0% | |
| GGAGACAATGAAAGTGATGA+TGG | + | chr4.3:66454066-66454085 | MS.gene93939:CDS | 40.0% | |
| GGATGACATACAAAAGCTTC+AGG | + | chr4.3:66456198-66456217 | MS.gene93939:CDS | 40.0% | |
| GGTACACCAGAACATGATTA+CGG | + | chr4.3:66453874-66453893 | MS.gene93939:CDS | 40.0% | |
| GGTGATAAAGGTGAAGATGA+TGG | + | chr4.3:66454114-66454133 | MS.gene93939:CDS | 40.0% | |
| GTAGAACCGTAATCATGTTC+TGG | - | chr4.3:66453883-66453902 | None:intergenic | 40.0% | |
| TGTTCTGGTGAATATAGTGC+TGG | + | chr4.3:66454093-66454112 | MS.gene93939:CDS | 40.0% | |
| TTGCCTTGAGAACAATCCAT+GGG | + | chr4.3:66455463-66455482 | MS.gene93939:intron | 40.0% | |
| TTTGTTGCGTTGGACGAAAA+AGG | + | chr4.3:66456030-66456049 | MS.gene93939:CDS | 40.0% | |
| ! | AGTGTCTGCAGAACATTTTC+TGG | - | chr4.3:66456386-66456405 | None:intergenic | 40.0% |
| ! | ATGCGTGCTGTTATTAAGGA+TGG | + | chr4.3:66454891-66454910 | MS.gene93939:CDS | 40.0% |
| ! | CCATCTGTTACAACTGCTTT+TGG | - | chr4.3:66455248-66455267 | None:intergenic | 40.0% |
| ! | CTTGAATGTGGACTATTGTG+GGG | + | chr4.3:66456066-66456085 | MS.gene93939:CDS | 40.0% |
| ! | GATGATGATGATGTGAGTCA+TGG | + | chr4.3:66453988-66454007 | MS.gene93939:CDS | 40.0% |
| ! | GTTGATGAAAGTGAAGGTCA+TGG | + | chr4.3:66454279-66454298 | MS.gene93939:CDS | 40.0% |
| ! | TAACCCATGGATTGTTCTCA+AGG | - | chr4.3:66455469-66455488 | None:intergenic | 40.0% |
| ! | TGATGATGTAGTTGTTGGTG+AGG | + | chr4.3:66454332-66454351 | MS.gene93939:CDS | 40.0% |
| ! | TGCATACAAGCTACCCTTTT+TGG | - | chr4.3:66456170-66456189 | None:intergenic | 40.0% |
| ! | TGTAGTTGTTGGTGAGGAAA+TGG | + | chr4.3:66454338-66454357 | MS.gene93939:CDS | 40.0% |
| ! | TTGTTGGTGAGGAAATGGTA+AGG | + | chr4.3:66454343-66454362 | MS.gene93939:CDS | 40.0% |
| !! | AGATGGTGATGGTTCTATGA+GGG | + | chr4.3:66455262-66455281 | MS.gene93939:intron | 40.0% |
| !! | ATTTGGTGCTACATTGGTGA+TGG | + | chr4.3:66455157-66455176 | MS.gene93939:intron | 40.0% |
| !! | GACAATGAAAGTGATGATGG+TGG | + | chr4.3:66454069-66454088 | MS.gene93939:CDS | 40.0% |
| !! | GAGCGAAGAAGCATTTATCA+AGG | + | chr4.3:66454547-66454566 | MS.gene93939:CDS | 40.0% |
| !! | GATGAAAGTCAAGGTGTTGA+AGG | + | chr4.3:66454147-66454166 | MS.gene93939:CDS | 40.0% |
| !! | TTATTTCTGCTTTGGCGATG+TGG | + | chr4.3:66455046-66455065 | MS.gene93939:intron | 40.0% |
| !!! | TATCCGTTGGTGATTTTGTC+TGG | + | chr4.3:66455107-66455126 | MS.gene93939:intron | 40.0% |
| AAACGTGAACGTGATGAAGG+TGG | + | chr4.3:66454210-66454229 | MS.gene93939:CDS | 45.0% | |
| ACTTTGTACGAGTGAGACGT+CGG | - | chr4.3:66454593-66454612 | None:intergenic | 45.0% | |
| AGAGAACCTTTGCACTTCAC+TGG | - | chr4.3:66456295-66456314 | None:intergenic | 45.0% | |
| CAGCCAGACAAAATCACCAA+CGG | - | chr4.3:66455113-66455132 | None:intergenic | 45.0% | |
| CGAGGCTGCTGAAATCTATA+CGG | + | chr4.3:66455748-66455767 | MS.gene93939:CDS | 45.0% | |
| CTGGCAATGGATCATGTATG+TGG | - | chr4.3:66456276-66456295 | None:intergenic | 45.0% | |
| GCAGTATGTATGCAACAAGC+AGG | + | chr4.3:66454518-66454537 | MS.gene93939:CDS | 45.0% | |
| GCAGTTGTAACAGATGGTGA+TGG | + | chr4.3:66455251-66455270 | MS.gene93939:intron | 45.0% | |
| GGTGATGAAAGTGAAGGTCA+TGG | + | chr4.3:66454249-66454268 | MS.gene93939:CDS | 45.0% | |
| GTTGAAGGTGAACGTGATGA+AGG | + | chr4.3:66454162-66454181 | MS.gene93939:CDS | 45.0% | |
| TACCTGCGTGACGATTTCTT+TGG | + | chr4.3:66455527-66455546 | MS.gene93939:intron | 45.0% | |
| TATCCGATCATTGTTGGGAG+TGG | + | chr4.3:66453928-66453947 | MS.gene93939:CDS | 45.0% | |
| TATGAGGGAGGCGATAAATG+CGG | + | chr4.3:66455277-66455296 | MS.gene93939:intron | 45.0% | |
| TGATTACGGTTCTACGGATG+TGG | + | chr4.3:66453888-66453907 | MS.gene93939:CDS | 45.0% | |
| TGCACAGCATTAGTTGGAGT+AGG | - | chr4.3:66454699-66454718 | None:intergenic | 45.0% | |
| TGGACGAAAAAGGCGAAGAT+TGG | + | chr4.3:66456040-66456059 | MS.gene93939:CDS | 45.0% | |
| TTCTTAGTGAACCCAACACC+AGG | - | chr4.3:66454843-66454862 | None:intergenic | 45.0% | |
| TTTCAAACGTCCGTCATCAG+TGG | - | chr4.3:66454991-66455010 | None:intergenic | 45.0% | |
| ! | AGTGAAGGTCATGGTAGTGA+AGG | + | chr4.3:66454258-66454277 | MS.gene93939:CDS | 45.0% |
| ! | TAGCTTGTATGCAGATGTGC+TGG | + | chr4.3:66456177-66456196 | MS.gene93939:CDS | 45.0% |
| !! | AGTGATGATGGTGGTTGTTC+TGG | + | chr4.3:66454078-66454097 | MS.gene93939:CDS | 45.0% |
| !! | CAGATGGTGATGGTTCTATG+AGG | + | chr4.3:66455261-66455280 | MS.gene93939:intron | 45.0% |
| !! | TGCAGGGAAGTGTCCAAAAA+GGG | + | chr4.3:66456154-66456173 | MS.gene93939:CDS | 45.0% |
| !! | TTGCAGGGAAGTGTCCAAAA+AGG | + | chr4.3:66456153-66456172 | MS.gene93939:CDS | 45.0% |
| AAGGGTGGATATCCTGGTGT+TGG | + | chr4.3:66454828-66454847 | MS.gene93939:CDS | 50.0% | |
| AGACGTGGGAGAAGGATCAA+AGG | + | chr4.3:66456447-66456466 | MS.gene93939:CDS | 50.0% | |
| AGGGTGGATATCCTGGTGTT+GGG | + | chr4.3:66454829-66454848 | MS.gene93939:CDS | 50.0% | |
| ATCCTTCTCCCACGTCTCTT+TGG | - | chr4.3:66456444-66456463 | None:intergenic | 50.0% | |
| CACCAAAGAAATCGTCACGC+AGG | - | chr4.3:66455532-66455551 | None:intergenic | 50.0% | |
| CAGATGAGTTGTCAGCACAG+GGG | - | chr4.3:66455714-66455733 | None:intergenic | 50.0% | |
| CATAGACGATGACGCGTACT+TGG | - | chr4.3:66455308-66455327 | None:intergenic | 50.0% | |
| CCACCACTCCCAACAATGAT+CGG | - | chr4.3:66453934-66453953 | None:intergenic | 50.0% | |
| CCATTGCCAGTGAAGTGCAA+AGG | + | chr4.3:66456286-66456305 | MS.gene93939:CDS | 50.0% | |
| CCTTTGCACTTCACTGGCAA+TGG | - | chr4.3:66456289-66456308 | None:intergenic | 50.0% | |
| CTGCGTGACGATTTCTTTGG+TGG | + | chr4.3:66455530-66455549 | MS.gene93939:intron | 50.0% | |
| GACGTGGGAGAAGGATCAAA+GGG | + | chr4.3:66456448-66456467 | MS.gene93939:CDS | 50.0% | |
| GCAGATGAGTTGTCAGCACA+GGG | - | chr4.3:66455715-66455734 | None:intergenic | 50.0% | |
| GGATACATGGTGGCTCAGAA+GGG | + | chr4.3:66454810-66454829 | MS.gene93939:CDS | 50.0% | |
| GGTGGAGGTGATGAAAGTGA+AGG | + | chr4.3:66454228-66454247 | MS.gene93939:CDS | 50.0% | |
| TAATGAACACGGAGCCTAGC+TGG | - | chr4.3:66454618-66454637 | None:intergenic | 50.0% | |
| TCCCACGTCTCTTTGGCTAT+CGG | - | chr4.3:66456437-66456456 | None:intergenic | 50.0% | |
| TGAGACATGGGCACAGAAAG+AGG | - | chr4.3:66456412-66456431 | None:intergenic | 50.0% | |
| ! | AGGTGTTGCACTGAGTGTGA+AGG | + | chr4.3:66455808-66455827 | MS.gene93939:CDS | 50.0% |
| ! | CTCGTACAAAGTGTCCAGCT+AGG | + | chr4.3:66454601-66454620 | MS.gene93939:CDS | 50.0% |
| !! | TGGTGATGGTTCTATGAGGG+AGG | + | chr4.3:66455265-66455284 | MS.gene93939:intron | 50.0% |
| !!! | TGAAGAGTTTTGGGGGGACT+TGG | + | chr4.3:66455430-66455449 | MS.gene93939:intron | 50.0% |
| AGCCAAAGAGACGTGGGAGA+AGG | + | chr4.3:66456439-66456458 | MS.gene93939:CDS | 55.0% | |
| CAGCACAGGGGATGAAAACC+TGG | - | chr4.3:66455702-66455721 | None:intergenic | 55.0% | |
| CCCACGTCTCTTTGGCTATC+GGG | - | chr4.3:66456436-66456455 | None:intergenic | 55.0% | |
| CCCGATAGCCAAAGAGACGT+GGG | + | chr4.3:66456433-66456452 | MS.gene93939:CDS | 55.0% | |
| CCGATCATTGTTGGGAGTGG+TGG | + | chr4.3:66453931-66453950 | MS.gene93939:CDS | 55.0% | |
| CGCAGATGAGTTGTCAGCAC+AGG | - | chr4.3:66455716-66455735 | None:intergenic | 55.0% | |
| CGCGTCATCGTCTATGTGCT+TGG | + | chr4.3:66455312-66455331 | MS.gene93939:intron | 55.0% | |
| CGTGAACGTGATGAAGGTGG+AGG | + | chr4.3:66454213-66454232 | MS.gene93939:CDS | 55.0% | |
| GCTCAGAAGGGTGGATATCC+TGG | + | chr4.3:66454822-66454841 | MS.gene93939:CDS | 55.0% | |
| GGGATACATGGTGGCTCAGA+AGG | + | chr4.3:66454809-66454828 | MS.gene93939:CDS | 55.0% | |
| GTGGGAGAAGGATCAAAGGG+AGG | + | chr4.3:66456451-66456470 | MS.gene93939:CDS | 55.0% | |
| TACATGGTGGCTCAGAAGGG+TGG | + | chr4.3:66454813-66454832 | MS.gene93939:CDS | 55.0% | |
| TCTGCGTTGTCTTGAACGCG+AGG | + | chr4.3:66455730-66455749 | MS.gene93939:CDS | 55.0% | |
| TGGCTATCGGGCTGAGACAT+GGG | - | chr4.3:66456424-66456443 | None:intergenic | 55.0% | |
| TTGGCTATCGGGCTGAGACA+TGG | - | chr4.3:66456425-66456444 | None:intergenic | 55.0% | |
| !!! | AGTTTTGGGGGGACTTGGTG+AGG | + | chr4.3:66455435-66455454 | MS.gene93939:intron | 55.0% |
| !!! | GTTTTGGGGGGACTTGGTGA+GGG | + | chr4.3:66455436-66455455 | MS.gene93939:intron | 55.0% |
| GCCCGATAGCCAAAGAGACG+TGG | + | chr4.3:66456432-66456451 | MS.gene93939:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 66453841 | 66456502 | 66453841 | ID=MS.gene93939 |
| chr4.3 | mRNA | 66453841 | 66456502 | 66453841 | ID=MS.gene93939.t1;Parent=MS.gene93939 |
| chr4.3 | exon | 66453841 | 66454949 | 66453841 | ID=MS.gene93939.t1.exon1;Parent=MS.gene93939.t1 |
| chr4.3 | CDS | 66453841 | 66454949 | 66453841 | ID=cds.MS.gene93939.t1;Parent=MS.gene93939.t1 |
| chr4.3 | exon | 66455610 | 66456338 | 66455610 | ID=MS.gene93939.t1.exon2;Parent=MS.gene93939.t1 |
| chr4.3 | CDS | 66455610 | 66456338 | 66455610 | ID=cds.MS.gene93939.t1;Parent=MS.gene93939.t1 |
| chr4.3 | exon | 66456433 | 66456502 | 66456433 | ID=MS.gene93939.t1.exon3;Parent=MS.gene93939.t1 |
| chr4.3 | CDS | 66456433 | 66456502 | 66456433 | ID=cds.MS.gene93939.t1;Parent=MS.gene93939.t1 |
| Gene Sequence |
| Protein sequence |
