Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94037.t1 | AES76151.1 | 87.9 | 264 | 26 | 1 | 1 | 264 | 1 | 258 | 5.90E-122 | 447.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94037.t1 | Q568K5 | 33.9 | 233 | 128 | 4 | 21 | 251 | 8 | 216 | 8.6e-21 | 102.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94037.t1 | G7KHW9 | 87.9 | 264 | 26 | 1 | 1 | 264 | 1 | 258 | 4.3e-122 | 447.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene94037.t1 | TR | GNAT |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94037.t1 | MTR_6g072100 | 87.879 | 264 | 26 | 1 | 1 | 264 | 1 | 258 | 1.08e-171 | 479 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94037.t1 | AT1G18335 | 49.811 | 265 | 121 | 4 | 3 | 263 | 6 | 262 | 7.45e-75 | 234 |
| MS.gene94037.t1 | AT1G18335 | 50.000 | 264 | 120 | 4 | 3 | 262 | 6 | 261 | 3.99e-74 | 232 |
| MS.gene94037.t1 | AT1G18335 | 50.000 | 264 | 120 | 4 | 3 | 262 | 6 | 261 | 3.99e-74 | 232 |
Find 99 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTCATAGGACACGGCTTC+TGG | 0.284691 | 6.4:-49572892 | MS.gene94037:intron |
| CTCTGAATATATTGCGTAAC+AGG | 0.291924 | 6.4:+49576314 | None:intergenic |
| TTAGCTTAAGAGCTCTATTC+AGG | 0.293764 | 6.4:+49571988 | None:intergenic |
| CTCTCGTAGGACATGGCTTC+TGG | 0.304045 | 6.4:-49572531 | MS.gene94037:intron |
| CTCTCATAGGACACGGCTTC+TGG | 0.304675 | 6.4:-49572355 | MS.gene94037:intron |
| CAGCCTCATGCTCAGTTGAT+TGG | 0.328993 | 6.4:+49572842 | None:intergenic |
| CAAAGCAGCTTATAGCAAAA+AGG | 0.331878 | 6.4:-49577547 | MS.gene94037:CDS |
| TCATGCTCAGTTGATTGGTT+GGG | 0.334696 | 6.4:+49572847 | None:intergenic |
| CTCAGTTGGTTGGATGGGTT+CGG | 0.361326 | 6.4:+49572491 | None:intergenic |
| ACCATTGGATCAACTTTAGA+AGG | 0.362053 | 6.4:+49574094 | None:intergenic |
| CTCGCCCTCAGTTGGTTGGA+TGG | 0.379337 | 6.4:+49572485 | None:intergenic |
| TGTACATTACCGCTTTGTTT+TGG | 0.388601 | 6.4:-49575352 | MS.gene94037:CDS |
| TCGTCGTCAGTTGGTTCGTC+GGG | 0.389680 | 6.4:+49572310 | None:intergenic |
| CTCATGCTCAGTTGATTGGT+TGG | 0.408139 | 6.4:+49572846 | None:intergenic |
| CTCTCATAGGACATGACTTC+GGG | 0.417664 | 6.4:-49572711 | MS.gene94037:intron |
| CTCGTCCTCAGTTGGTTGGA+TGG | 0.420386 | 6.4:+49572665 | None:intergenic |
| TTAGCCAATAGGATGTATTT+CGG | 0.421672 | 6.4:-49572015 | MS.gene94037:CDS |
| TCGTCCTCAGTTGGTTGGAT+GGG | 0.424743 | 6.4:+49572666 | None:intergenic |
| CGTGTCCAGGGGAAAGGATT+GGG | 0.426522 | 6.4:-49575282 | MS.gene94037:CDS |
| ATATATTCAGAGACTTCTTA+AGG | 0.426624 | 6.4:-49576303 | MS.gene94037:intron |
| AAAGGTGAAGCATAGAGAAA+TGG | 0.437846 | 6.4:-49575505 | MS.gene94037:CDS |
| TATCGCCGCTTCGAAATTAA+CGG | 0.439774 | 6.4:-49577501 | MS.gene94037:intron |
| ACAGCTCGAGCCTCGTGTCC+AGG | 0.444598 | 6.4:-49575295 | MS.gene94037:CDS |
| GGCGTTGTCGTGAGTTGCAT+TGG | 0.447552 | 6.4:+49577719 | None:intergenic |
| ACAAATATATAGCGTGCTTC+AGG | 0.453405 | 6.4:+49575477 | None:intergenic |
| AATTCCGAAATACATCCTAT+TGG | 0.458467 | 6.4:+49572011 | None:intergenic |
| TCTTCTTGACGACTAGTTGA+AGG | 0.460099 | 6.4:+49575396 | None:intergenic |
| CTCAGTTGATTGGTTGGGGT+CGG | 0.462972 | 6.4:+49572852 | None:intergenic |
| GTTGATTGGTTGGGGTCGGC+AGG | 0.463023 | 6.4:+49572856 | None:intergenic |
| CAGCCTCGTCCTCAGTTGGT+TGG | 0.465098 | 6.4:+49572661 | None:intergenic |
| GTTGGTTGGATGGGGTCGGC+AGG | 0.465781 | 6.4:+49572675 | None:intergenic |
| CTTAACATGGAAGGGCCATA+TGG | 0.467460 | 6.4:-49575549 | MS.gene94037:CDS |
| GCTTTCCCAATCCTTTCCCC+TGG | 0.468580 | 6.4:+49575277 | None:intergenic |
| CAGCCTCGCCCTCAGTTGGT+TGG | 0.474613 | 6.4:+49572481 | None:intergenic |
| AGGATTGGGAAAGCTTCTAA+TGG | 0.474839 | 6.4:-49575268 | MS.gene94037:CDS |
| CTGTCGTGCTAACTGTTCAA+AGG | 0.475803 | 6.4:-49574958 | MS.gene94037:CDS |
| GTTGGTTCGTCGGGGTCACC+TGG | 0.481274 | 6.4:+49572319 | None:intergenic |
| CTCGTCGTCAGTTGGTTCGT+CGG | 0.482006 | 6.4:+49572309 | None:intergenic |
| TCGCCCTCAGTTGGTTGGAT+GGG | 0.482404 | 6.4:+49572486 | None:intergenic |
| CTCAGTTGGTTGGATGGGGT+CGG | 0.486235 | 6.4:+49572671 | None:intergenic |
| CAGCTCGAGCCTCGTGTCCA+GGG | 0.491833 | 6.4:-49575294 | MS.gene94037:CDS |
| GAAGATAGTGGTCCCTTGGT+TGG | 0.492453 | 6.4:-49575378 | MS.gene94037:CDS |
| CATGCTCAGTTGATTGGTTG+GGG | 0.499435 | 6.4:+49572848 | None:intergenic |
| TATTGAGCTTATCGCCCAAA+AGG | 0.500241 | 6.4:-49575241 | MS.gene94037:intron |
| CAATGCTAACCTTTCGGCAT+CGG | 0.501747 | 6.4:+49572156 | None:intergenic |
| ACATGAGGAAGTTAGCCAAT+AGG | 0.503838 | 6.4:-49572026 | MS.gene94037:CDS |
| CGTCCTCAGTTGGTTGGATG+GGG | 0.507573 | 6.4:+49572667 | None:intergenic |
| CGTGAGTTGCATTGGTTCCA+CGG | 0.508423 | 6.4:+49577727 | None:intergenic |
| TCTTGCCACTCAGATCCATA+TGG | 0.513626 | 6.4:+49575534 | None:intergenic |
| CTCTCCGTGTGTTTAAAGTC+AGG | 0.520731 | 6.4:-49576359 | MS.gene94037:CDS |
| ATTTCAGCCTCGCCCTCAGT+TGG | 0.524801 | 6.4:+49572477 | None:intergenic |
| TCGTGTCCAGGGGAAAGGAT+TGG | 0.525244 | 6.4:-49575283 | MS.gene94037:CDS |
| TGAGTGGCAAGAGGAAGAAA+AGG | 0.525897 | 6.4:-49575523 | MS.gene94037:CDS |
| ATCTACAGCTTAACATGGAA+GGG | 0.529467 | 6.4:-49575557 | MS.gene94037:intron |
| GTTGGTTGGATGGGTTCGGC+AGG | 0.532279 | 6.4:+49572495 | None:intergenic |
| GAGCCTCGTGTCCAGGGGAA+AGG | 0.535185 | 6.4:-49575288 | MS.gene94037:CDS |
| CATTGGTTCCACGGTGACGT+TGG | 0.535191 | 6.4:+49577736 | None:intergenic |
| CATCCAACCAACTGAGGGCG+AGG | 0.539135 | 6.4:-49572484 | MS.gene94037:CDS |
| AATCTACAGCTTAACATGGA+AGG | 0.544882 | 6.4:-49575558 | MS.gene94037:intron |
| ATTTCAGCCTCGTCGTCAGT+TGG | 0.553072 | 6.4:+49572301 | None:intergenic |
| ACCTTCTAAAGTTGATCCAA+TGG | 0.555355 | 6.4:-49574095 | MS.gene94037:intron |
| TCAAGAAGATAGTGGTCCCT+TGG | 0.557490 | 6.4:-49575382 | MS.gene94037:CDS |
| TAACCTTCTCTCTGTTGCAA+CGG | 0.557592 | 6.4:+49577698 | None:intergenic |
| ACGTTGATGCCGATGCCGAA+AGG | 0.559474 | 6.4:-49572165 | MS.gene94037:intron |
| ATTTCAGCCTCGTCCTCAGT+TGG | 0.560819 | 6.4:+49572657 | None:intergenic |
| CCTCTCATAGGACATGACTT+CGG | 0.565717 | 6.4:-49572712 | MS.gene94037:intron |
| ACGCTATATATTTGTGCATG+AGG | 0.569652 | 6.4:-49575469 | MS.gene94037:CDS |
| CATCCAACCAACTGAGGACG+AGG | 0.575763 | 6.4:-49572664 | MS.gene94037:CDS |
| ATTTCGAAGCGGCGATAATG+CGG | 0.576591 | 6.4:+49577507 | None:intergenic |
| AGTTCATACACATAAAGTAC+TGG | 0.583472 | 6.4:+49575318 | None:intergenic |
| TGTCGTGCTAACTGTTCAAA+GGG | 0.585683 | 6.4:-49574957 | MS.gene94037:CDS |
| ACTAGTCGTCAAGAAGATAG+TGG | 0.589965 | 6.4:-49575390 | MS.gene94037:CDS |
| CAACCAATCAACTGAGCATG+AGG | 0.596952 | 6.4:-49572845 | MS.gene94037:CDS |
| AATCCTTTCCCCTGGACACG+AGG | 0.597062 | 6.4:+49575285 | None:intergenic |
| CGAACCCATCCAACCAACTG+AGG | 0.610550 | 6.4:-49572490 | MS.gene94037:CDS |
| GAACCCATCCAACCAACTGA+GGG | 0.612877 | 6.4:-49572489 | MS.gene94037:CDS |
| ACGGTGACGTTGGAGCATCT+CGG | 0.615472 | 6.4:+49577746 | None:intergenic |
| CGACCCCATCCAACCAACTG+AGG | 0.623573 | 6.4:-49572670 | MS.gene94037:CDS |
| AGCTCGAGCCTCGTGTCCAG+GGG | 0.623716 | 6.4:-49575293 | MS.gene94037:CDS |
| AATATATTGCGTAACAGGAG+AGG | 0.626761 | 6.4:+49576319 | None:intergenic |
| GGATTGAAACAACGGACATG+AGG | 0.632408 | 6.4:-49572041 | MS.gene94037:CDS |
| ACGCCGTTGCAACAGAGAGA+AGG | 0.635915 | 6.4:-49577701 | MS.gene94037:CDS |
| ATATATCAGGATTGAAACAA+CGG | 0.638072 | 6.4:-49572049 | MS.gene94037:intron |
| ATTGCGTAACAGGAGAGGAA+AGG | 0.649302 | 6.4:+49576324 | None:intergenic |
| ATATGGATCTGAGTGGCAAG+AGG | 0.653218 | 6.4:-49575532 | MS.gene94037:CDS |
| TCTAAATCTACAGCTTAACA+TGG | 0.653637 | 6.4:-49575562 | MS.gene94037:intron |
| CGACGAACCAACTGACGACG+AGG | 0.657612 | 6.4:-49572308 | MS.gene94037:CDS |
| GTGTGTTTAAAGTCAGGACA+TGG | 0.661363 | 6.4:-49576353 | MS.gene94037:CDS |
| TGTTACCGTTAATTTCGAAG+CGG | 0.667914 | 6.4:+49577496 | None:intergenic |
| TAATGTACAAATCCAACCAA+GGG | 0.669573 | 6.4:+49575366 | None:intergenic |
| GTAATGTACAAATCCAACCA+AGG | 0.669580 | 6.4:+49575365 | None:intergenic |
| ATGTCCTGACTTTAAACACA+CGG | 0.673198 | 6.4:+49576355 | None:intergenic |
| CGTCGTCAGTTGGTTCGTCG+GGG | 0.674091 | 6.4:+49572311 | None:intergenic |
| ATCAACTTTAGAAGGTGACG+TGG | 0.674095 | 6.4:+49574102 | None:intergenic |
| GATGACAACAGTGTTGACTG+AGG | 0.683653 | 6.4:-49575424 | MS.gene94037:CDS |
| GATAATGCGGAAAAGAATCG+AGG | 0.710792 | 6.4:+49577520 | None:intergenic |
| CCTCTTCTTCCAAAACAAAG+CGG | 0.723548 | 6.4:+49575343 | None:intergenic |
| AAGGGCCATATGGATCTGAG+TGG | 0.737924 | 6.4:-49575539 | MS.gene94037:CDS |
| GAGATGCTCCAACGTCACCG+TGG | 0.742842 | 6.4:-49577744 | MS.gene94037:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAAAACAATAAAGAA+AGG | - | chr6.4:49576621-49576640 | MS.gene94037:intron | 10.0% |
| !! | ATTCTCAAAATAAAAATTTA+AGG | - | chr6.4:49575378-49575397 | MS.gene94037:CDS | 10.0% |
| !! | GAAATACAATTAAATTAATA+AGG | + | chr6.4:49574986-49575005 | None:intergenic | 10.0% |
| !!! | TAGTTTATTTTTATTTTAGT+CGG | - | chr6.4:49577561-49577580 | MS.gene94037:CDS | 10.0% |
| !!! | TCTTTTTTTTAAAATTTTGA+AGG | - | chr6.4:49576973-49576992 | MS.gene94037:intron | 10.0% |
| !!! | TTCTTTTTTTAAAATTTTGA+AGG | - | chr6.4:49577153-49577172 | MS.gene94037:intron | 10.0% |
| !!! | TTTCTTTTTTAAAATTTTGA+AGG | - | chr6.4:49577506-49577525 | MS.gene94037:CDS | 10.0% |
| !! | AAGGAAATTAAGATATTTAA+TGG | - | chr6.4:49576640-49576659 | MS.gene94037:intron | 15.0% |
| !! | ATTATAGATAATCAATCTAA+TGG | + | chr6.4:49575840-49575859 | None:intergenic | 15.0% |
| !! | TTCAATTTATAAATCTGTAA+TGG | - | chr6.4:49575273-49575292 | MS.gene94037:CDS | 15.0% |
| !! | TTCATAATTCTCATAATATT+TGG | - | chr6.4:49575488-49575507 | MS.gene94037:CDS | 15.0% |
| !!! | AAATTTGTTTATTGAATTAG+CGG | + | chr6.4:49573102-49573121 | None:intergenic | 15.0% |
| !!! | CAAATTTTTATTTAGATTCA+TGG | - | chr6.4:49576502-49576521 | MS.gene94037:intron | 15.0% |
| !!! | CAATTTATTGATTTTTTTAC+AGG | - | chr6.4:49574703-49574722 | MS.gene94037:intron | 15.0% |
| !!! | GTTTCTTTTTAAAATTTTGA+AGG | - | chr6.4:49577331-49577350 | MS.gene94037:intron | 15.0% |
| !! | AAAAAAGAAAAGAAAAGTCT+GGG | - | chr6.4:49576587-49576606 | MS.gene94037:intron | 20.0% |
| !! | AGAGATTAAAAATTCAATGA+TGG | + | chr6.4:49574886-49574905 | None:intergenic | 20.0% |
| !! | AGTTTATGAAAGTAGAAAAT+AGG | + | chr6.4:49575453-49575472 | None:intergenic | 20.0% |
| !! | ATAAAATCAAATATACTCAC+AGG | + | chr6.4:49576944-49576963 | None:intergenic | 20.0% |
| !! | ATAGTAACCTATAGTTTATA+AGG | - | chr6.4:49573259-49573278 | MS.gene94037:intron | 20.0% |
| !! | ATATCAAAGATCATATTAGA+TGG | + | chr6.4:49574744-49574763 | None:intergenic | 20.0% |
| !! | CTTACTACATTATTAATTAC+AGG | - | chr6.4:49573225-49573244 | MS.gene94037:intron | 20.0% |
| !! | GAAAAATCTAGAAAGTTATT+AGG | + | chr6.4:49575545-49575564 | None:intergenic | 20.0% |
| !! | GAATTATGAAAGTAGAAAAT+AGG | + | chr6.4:49575478-49575497 | None:intergenic | 20.0% |
| !! | GTAAACACTTGTAATTTAAT+GGG | - | chr6.4:49573717-49573736 | MS.gene94037:intron | 20.0% |
| !! | GTGTAATAGACTTATATATA+AGG | - | chr6.4:49575178-49575197 | MS.gene94037:intron | 20.0% |
| !! | TAAAAAAGAAAAGAAAAGTC+TGG | - | chr6.4:49576586-49576605 | MS.gene94037:intron | 20.0% |
| !! | TAATCGTTAATATTTCAACA+TGG | - | chr6.4:49573288-49573307 | MS.gene94037:intron | 20.0% |
| !! | TATCAAAGATCATATTAGAT+GGG | + | chr6.4:49574743-49574762 | None:intergenic | 20.0% |
| !! | TGATAGTATAAACAAGTAAA+AGG | + | chr6.4:49574079-49574098 | None:intergenic | 20.0% |
| !! | TTGAAGTAAGAACAATATTA+TGG | - | chr6.4:49575333-49575352 | MS.gene94037:CDS | 20.0% |
| !!! | AAATGCCTTTTTTATTAGTT+CGG | - | chr6.4:49576077-49576096 | MS.gene94037:intron | 20.0% |
| !!! | ATTATAGCCTTATAAACTAT+AGG | + | chr6.4:49573269-49573288 | None:intergenic | 20.0% |
| !!! | ATTTTTACACTAGTAAACTA+AGG | - | chr6.4:49574839-49574858 | MS.gene94037:intron | 20.0% |
| !!! | ATTTTTCTTCTACTTTTTTG+TGG | - | chr6.4:49576374-49576393 | MS.gene94037:intron | 20.0% |
| !!! | GAATTTTGTTTTTATCATGA+GGG | - | chr6.4:49574040-49574059 | MS.gene94037:intron | 20.0% |
| !!! | TGAATTTTGTTTTTATCATG+AGG | - | chr6.4:49574039-49574058 | MS.gene94037:intron | 20.0% |
| !!! | TTTTGTAGTACTTTTTATCA+GGG | - | chr6.4:49577624-49577643 | MS.gene94037:intron | 20.0% |
| !!! | TTTTTCAATTGAGATAATGA+AGG | - | chr6.4:49572863-49572882 | MS.gene94037:CDS | 20.0% |
| !!! | TTTTTCTTCTACTTTTTTGT+GGG | - | chr6.4:49576375-49576394 | MS.gene94037:intron | 20.0% |
| !!! | TTTTTGTAGTACTTTTTATC+AGG | - | chr6.4:49577623-49577642 | MS.gene94037:intron | 20.0% |
| ! | AAAAAGAAAAGAAAAGTCTG+GGG | - | chr6.4:49576588-49576607 | MS.gene94037:intron | 25.0% |
| ! | AAAAATCAATGCTAACCTTT+CGG | + | chr6.4:49577608-49577627 | None:intergenic | 25.0% |
| ! | AAAAATTTAAGGATCTTTGC+AGG | - | chr6.4:49575389-49575408 | MS.gene94037:CDS | 25.0% |
| ! | AACGAAGACTAAACATAAAA+AGG | + | chr6.4:49575589-49575608 | None:intergenic | 25.0% |
| ! | AACTTATAAGCTAACTGATA+GGG | - | chr6.4:49572670-49572689 | MS.gene94037:CDS | 25.0% |
| ! | AATCATGATCTATATCACAA+AGG | + | chr6.4:49577360-49577379 | None:intergenic | 25.0% |
| ! | ACGAAGACTAAACATAAAAA+GGG | + | chr6.4:49575588-49575607 | None:intergenic | 25.0% |
| ! | AGAGAATTATTATGTTGCAA+AGG | - | chr6.4:49574581-49574600 | MS.gene94037:intron | 25.0% |
| ! | ATAAAATCAACTATACTCAC+AGG | + | chr6.4:49577305-49577324 | None:intergenic | 25.0% |
| ! | ATAATGTAGTAAGTAGAAGT+TGG | + | chr6.4:49573218-49573237 | None:intergenic | 25.0% |
| ! | ATATATCAGGATTGAAACAA+CGG | - | chr6.4:49577706-49577725 | MS.gene94037:CDS | 25.0% |
| ! | ATATATTCAGAGACTTCTTA+AGG | - | chr6.4:49573452-49573471 | MS.gene94037:intron | 25.0% |
| ! | GGTAAACACTTGTAATTTAA+TGG | - | chr6.4:49573716-49573735 | MS.gene94037:intron | 25.0% |
| ! | TAACTTATAAGCTAACTGAT+AGG | - | chr6.4:49572669-49572688 | MS.gene94037:CDS | 25.0% |
| ! | TAATGTAGTAAGTAGAAGTT+GGG | + | chr6.4:49573217-49573236 | None:intergenic | 25.0% |
| ! | TAGTATAAACAAGTAAAAGG+TGG | + | chr6.4:49574076-49574095 | None:intergenic | 25.0% |
| ! | TGTAAGTTTGTATAACTCTT+TGG | + | chr6.4:49572985-49573004 | None:intergenic | 25.0% |
| ! | TTAATACATCCAAGATATCA+TGG | + | chr6.4:49576132-49576151 | None:intergenic | 25.0% |
| ! | TTAATATTTCAACATGGCTA+TGG | - | chr6.4:49573294-49573313 | MS.gene94037:intron | 25.0% |
| ! | TTATAAAGTATGAGCTCAAA+TGG | - | chr6.4:49572905-49572924 | MS.gene94037:intron | 25.0% |
| ! | TTCCTATCAAAATTTATACC+TGG | - | chr6.4:49576759-49576778 | MS.gene94037:intron | 25.0% |
| ! | TTTGTATAACTCTTTGGTAA+TGG | + | chr6.4:49572979-49572998 | None:intergenic | 25.0% |
| !! | AAAAACAATTAAGCACCTTT+TGG | + | chr6.4:49574532-49574551 | None:intergenic | 25.0% |
| !! | AAAACAATTAAGCACCTTTT+GGG | + | chr6.4:49574531-49574550 | None:intergenic | 25.0% |
| !! | AAAAGCAGAGAAATATTTTC+TGG | + | chr6.4:49575023-49575042 | None:intergenic | 25.0% |
| !! | ACAAAAAATATTAGCCTAGA+TGG | + | chr6.4:49575934-49575953 | None:intergenic | 25.0% |
| !! | ACAGTTATATTTGTTGAGTA+TGG | - | chr6.4:49573530-49573549 | MS.gene94037:intron | 25.0% |
| !! | ATAACACTTACAATTTTGCA+GGG | + | chr6.4:49575695-49575714 | None:intergenic | 25.0% |
| !! | CTCTACTATCTTTCTTTTAT+TGG | - | chr6.4:49576263-49576282 | MS.gene94037:intron | 25.0% |
| !! | CTTATTGAATTTGAAGTGTT+TGG | - | chr6.4:49572722-49572741 | MS.gene94037:intron | 25.0% |
| !! | GTTAGCTTATTCATTGAAAT+GGG | - | chr6.4:49574146-49574165 | MS.gene94037:intron | 25.0% |
| !! | TGTTAGCTTATTCATTGAAA+TGG | - | chr6.4:49574145-49574164 | MS.gene94037:intron | 25.0% |
| !!! | AATGCCTTTTTTATTAGTTC+GGG | - | chr6.4:49576078-49576097 | MS.gene94037:intron | 25.0% |
| !!! | ATACTATTTTGAAGAACTTG+TGG | + | chr6.4:49572561-49572580 | None:intergenic | 25.0% |
| !!! | ATATTTTCTGGAATGCATTA+AGG | + | chr6.4:49575011-49575030 | None:intergenic | 25.0% |
| !!! | CCTTAAGTATTGATAAAGAA+GGG | + | chr6.4:49576227-49576246 | None:intergenic | 25.0% |
| !!! | TATCTGTTGATTCATATATC+AGG | - | chr6.4:49577693-49577712 | MS.gene94037:CDS | 25.0% |
| !!! | TCCTTAAGTATTGATAAAGA+AGG | + | chr6.4:49576228-49576247 | None:intergenic | 25.0% |
| !!! | TGAAGCTAAAACTATTTTTG+AGG | - | chr6.4:49575798-49575817 | MS.gene94037:intron | 25.0% |
| AACACTTGTAATTTAATGGG+TGG | - | chr6.4:49573720-49573739 | MS.gene94037:intron | 30.0% | |
| AAGACTAAACATAAAAAGGG+AGG | + | chr6.4:49575585-49575604 | None:intergenic | 30.0% | |
| AATTCCGAAATACATCCTAT+TGG | + | chr6.4:49577747-49577766 | None:intergenic | 30.0% | |
| ACTTATAAGCTAACTGATAG+GGG | - | chr6.4:49572671-49572690 | MS.gene94037:CDS | 30.0% | |
| AGACTAAACATAAAAAGGGA+GGG | + | chr6.4:49575584-49575603 | None:intergenic | 30.0% | |
| AGTTCATACACATAAAGTAC+TGG | + | chr6.4:49574440-49574459 | None:intergenic | 30.0% | |
| ATAGGACAATCATGAACAAT+AGG | + | chr6.4:49573942-49573961 | None:intergenic | 30.0% | |
| ATCCAACAGTTATAGATCAA+TGG | + | chr6.4:49576186-49576205 | None:intergenic | 30.0% | |
| CAAGTTTGATATGAATGGAA+GGG | - | chr6.4:49574922-49574941 | MS.gene94037:CDS | 30.0% | |
| CATGTCAAGTTTGATATGAA+TGG | - | chr6.4:49574917-49574936 | MS.gene94037:CDS | 30.0% | |
| CCCTTCTTTATCAATACTTA+AGG | - | chr6.4:49576224-49576243 | MS.gene94037:intron | 30.0% | |
| CTATCAAAATTTATACCTGG+TGG | - | chr6.4:49576762-49576781 | MS.gene94037:intron | 30.0% | |
| CTCGACTTTCAACTTAAATT+TGG | - | chr6.4:49576793-49576812 | MS.gene94037:intron | 30.0% | |
| CTGGAAATAAGGTAAAACTT+AGG | + | chr6.4:49573374-49573393 | None:intergenic | 30.0% | |
| GATAAACAGTTTATTTCGCA+TGG | - | chr6.4:49572365-49572384 | MS.gene94037:intron | 30.0% | |
| GATATCTTGATAGATAACCT+GGG | + | chr6.4:49575520-49575539 | None:intergenic | 30.0% | |
| GCATGATCTATATCACAAAA+AGG | + | chr6.4:49577002-49577021 | None:intergenic | 30.0% | |
| GTAAAACTTAGGCATATTGA+AGG | + | chr6.4:49573363-49573382 | None:intergenic | 30.0% | |
| GTCTATCATATATACAGAGA+AGG | - | chr6.4:49576703-49576722 | MS.gene94037:intron | 30.0% | |
| TAAACTGTTTATCCAAACAG+AGG | + | chr6.4:49572358-49572377 | None:intergenic | 30.0% | |
| TAATGTACAAATCCAACCAA+GGG | + | chr6.4:49574392-49574411 | None:intergenic | 30.0% | |
| TAGGACAATCATGAACAATA+GGG | + | chr6.4:49573941-49573960 | None:intergenic | 30.0% | |
| TATAGCATAAACACTGATCA+TGG | - | chr6.4:49572390-49572409 | MS.gene94037:intron | 30.0% | |
| TCAAGTTTGATATGAATGGA+AGG | - | chr6.4:49574921-49574940 | MS.gene94037:CDS | 30.0% | |
| TCTAAATCTACAGCTTAACA+TGG | - | chr6.4:49574193-49574212 | MS.gene94037:intron | 30.0% | |
| TCTTCTTGTAGACATATATG+TGG | + | chr6.4:49575063-49575082 | None:intergenic | 30.0% | |
| TGATATCTTGATAGATAACC+TGG | + | chr6.4:49575521-49575540 | None:intergenic | 30.0% | |
| TTAGCCAATAGGATGTATTT+CGG | - | chr6.4:49577740-49577759 | MS.gene94037:CDS | 30.0% | |
| TTATCTGTTTGTGTAGAGTT+GGG | - | chr6.4:49573872-49573891 | MS.gene94037:intron | 30.0% | |
| TTCAATGAATAAGCTAACAC+AGG | + | chr6.4:49574144-49574163 | None:intergenic | 30.0% | |
| TTCCAATAATGTAATGCTAG+AGG | + | chr6.4:49573774-49573793 | None:intergenic | 30.0% | |
| TTGAGTATGGCTCAAATTAA+CGG | - | chr6.4:49573543-49573562 | MS.gene94037:intron | 30.0% | |
| TTGTTCATGATTGTCCTATT+TGG | - | chr6.4:49573943-49573962 | MS.gene94037:intron | 30.0% | |
| TTTATCTGTTTGTGTAGAGT+TGG | - | chr6.4:49573871-49573890 | MS.gene94037:intron | 30.0% | |
| ! | CATAACACTTACAATTTTGC+AGG | + | chr6.4:49575696-49575715 | None:intergenic | 30.0% |
| ! | TAACACTTACAATTTTGCAG+GGG | + | chr6.4:49575694-49575713 | None:intergenic | 30.0% |
| ! | TACGTTTTTCTTACTCTAGA+CGG | - | chr6.4:49575977-49575996 | MS.gene94037:intron | 30.0% |
| ! | TCAAAGGGGAATATGTTTTA+TGG | + | chr6.4:49575897-49575916 | None:intergenic | 30.0% |
| ! | TCTGTAATGGTAATGTTAGT+TGG | - | chr6.4:49575286-49575305 | MS.gene94037:CDS | 30.0% |
| ! | TGTTTTCATAAGCTATCATG+AGG | - | chr6.4:49572484-49572503 | MS.gene94037:CDS | 30.0% |
| ! | TTGGGTGTAGCTTAATTTTT+GGG | + | chr6.4:49573199-49573218 | None:intergenic | 30.0% |
| !! | AATTAGACACTCGTCATTTT+AGG | + | chr6.4:49573058-49573077 | None:intergenic | 30.0% |
| !! | AGTACTTTTTATCAGGGTAT+AGG | - | chr6.4:49577630-49577649 | MS.gene94037:intron | 30.0% |
| !! | CACCAGGTATAAATTTTGAT+AGG | + | chr6.4:49576764-49576783 | None:intergenic | 30.0% |
| !! | CTAAGTTTTACCTTATTTCC+AGG | - | chr6.4:49573372-49573391 | MS.gene94037:intron | 30.0% |
| !! | TTTAGTCTTCGTTTTGTTGA+CGG | - | chr6.4:49575596-49575615 | MS.gene94037:intron | 30.0% |
| !!! | ACTTTTCTTTTAGAACTGCA+TGG | - | chr6.4:49574771-49574790 | MS.gene94037:intron | 30.0% |
| !!! | ATAATATTTGGTTTTAGCCC+AGG | - | chr6.4:49575500-49575519 | MS.gene94037:CDS | 30.0% |
| !!! | CTTTTCTTTTAGAACTGCAT+GGG | - | chr6.4:49574772-49574791 | MS.gene94037:intron | 30.0% |
| AAAGGTGAAGCATAGAGAAA+TGG | - | chr6.4:49574250-49574269 | MS.gene94037:intron | 35.0% | |
| AACCATCATCATGTTCACAT+TGG | + | chr6.4:49576337-49576356 | None:intergenic | 35.0% | |
| AAGGACACAACTTATAGTCT+AGG | - | chr6.4:49574600-49574619 | MS.gene94037:intron | 35.0% | |
| AATATATTGCGTAACAGGAG+AGG | + | chr6.4:49573439-49573458 | None:intergenic | 35.0% | |
| AATCTACAGCTTAACATGGA+AGG | - | chr6.4:49574197-49574216 | MS.gene94037:intron | 35.0% | |
| ACAAATATATAGCGTGCTTC+AGG | + | chr6.4:49574281-49574300 | None:intergenic | 35.0% | |
| ACCATTGGATCAACTTTAGA+AGG | + | chr6.4:49575664-49575683 | None:intergenic | 35.0% | |
| ACGCTATATATTTGTGCATG+AGG | - | chr6.4:49574286-49574305 | MS.gene94037:intron | 35.0% | |
| AGCCTCTAGCATTACATTAT+TGG | - | chr6.4:49573769-49573788 | MS.gene94037:intron | 35.0% | |
| AGCTTATTCATTGAAATGGG+CGG | - | chr6.4:49574149-49574168 | MS.gene94037:intron | 35.0% | |
| AGGAGCTTATGAAAATAAGC+TGG | - | chr6.4:49572504-49572523 | MS.gene94037:CDS | 35.0% | |
| AGGCTTATACAAAAGCAGTT+AGG | + | chr6.4:49574966-49574985 | None:intergenic | 35.0% | |
| ATCTACAGCTTAACATGGAA+GGG | - | chr6.4:49574198-49574217 | MS.gene94037:intron | 35.0% | |
| ATGTCCTGACTTTAAACACA+CGG | + | chr6.4:49573403-49573422 | None:intergenic | 35.0% | |
| CAAAGCAGCTTATAGCAAAA+AGG | - | chr6.4:49572208-49572227 | MS.gene94037:intron | 35.0% | |
| CAACCAAAACCATGATATCT+TGG | - | chr6.4:49576120-49576139 | MS.gene94037:intron | 35.0% | |
| CACATTGGACAAGATATGAT+TGG | + | chr6.4:49576322-49576341 | None:intergenic | 35.0% | |
| CCAAACAATAACGAAGTCTT+CGG | + | chr6.4:49572635-49572654 | None:intergenic | 35.0% | |
| CGTGAATGAAGAAAGTTTAG+AGG | + | chr6.4:49572110-49572129 | None:intergenic | 35.0% | |
| CTCCATTGATCTATAACTGT+TGG | - | chr6.4:49576181-49576200 | MS.gene94037:intron | 35.0% | |
| CTCTGAATATATTGCGTAAC+AGG | + | chr6.4:49573444-49573463 | None:intergenic | 35.0% | |
| CTTCTCCAAAAATTCACCTT+CGG | - | chr6.4:49573974-49573993 | MS.gene94037:CDS | 35.0% | |
| GACTAAACATAAAAAGGGAG+GGG | + | chr6.4:49575583-49575602 | None:intergenic | 35.0% | |
| GGCTTATACAAAAGCAGTTA+GGG | + | chr6.4:49574965-49574984 | None:intergenic | 35.0% | |
| GTAATGTACAAATCCAACCA+AGG | + | chr6.4:49574393-49574412 | None:intergenic | 35.0% | |
| TAACAGTGATTGACATGTTG+AGG | + | chr6.4:49575243-49575262 | None:intergenic | 35.0% | |
| TCATAGGGTTATGACTATGA+CGG | - | chr6.4:49573653-49573672 | MS.gene94037:intron | 35.0% | |
| TGATAGACTTAAATTGCGCA+TGG | + | chr6.4:49576691-49576710 | None:intergenic | 35.0% | |
| TGTAGACATATATGTGGTTC+AGG | + | chr6.4:49575057-49575076 | None:intergenic | 35.0% | |
| TGTTACACACAACTGTTTGT+AGG | - | chr6.4:49576434-49576453 | MS.gene94037:intron | 35.0% | |
| TGTTACCGTTAATTTCGAAG+CGG | + | chr6.4:49572262-49572281 | None:intergenic | 35.0% | |
| TGTTTCTTGTGTAGATAGGA+TGG | - | chr6.4:49576726-49576745 | MS.gene94037:intron | 35.0% | |
| TTATCAGGGTATAGGATTGA+GGG | - | chr6.4:49577638-49577657 | MS.gene94037:intron | 35.0% | |
| TTGAGCATGGATCATTCATA+GGG | - | chr6.4:49573638-49573657 | MS.gene94037:intron | 35.0% | |
| TTTATCAGGGTATAGGATTG+AGG | - | chr6.4:49577637-49577656 | MS.gene94037:intron | 35.0% | |
| ! | AACACTTACAATTTTGCAGG+GGG | + | chr6.4:49575693-49575712 | None:intergenic | 35.0% |
| ! | AAGGTGTTTCTTGTGTAGAT+AGG | - | chr6.4:49576722-49576741 | MS.gene94037:intron | 35.0% |
| ! | ACCAAACTGCTATCTTTTGA+CGG | + | chr6.4:49573021-49573040 | None:intergenic | 35.0% |
| ! | CAATTTTCACAACCTCTCAT+AGG | - | chr6.4:49576850-49576869 | MS.gene94037:intron | 35.0% |
| ! | CATCCAAGATATCATGGTTT+TGG | + | chr6.4:49576126-49576145 | None:intergenic | 35.0% |
| ! | GATCCATGTTGTAGTACTTT+TGG | - | chr6.4:49576024-49576043 | MS.gene94037:intron | 35.0% |
| ! | GCTCAAATTAACGGATAAGT+GGG | - | chr6.4:49573552-49573571 | MS.gene94037:intron | 35.0% |
| ! | GTTGGGTGTAGCTTAATTTT+TGG | + | chr6.4:49573200-49573219 | None:intergenic | 35.0% |
| ! | TGGGTGTAGCTTAATTTTTG+GGG | + | chr6.4:49573198-49573217 | None:intergenic | 35.0% |
| ! | TTACACCGAAGGTGAATTTT+TGG | + | chr6.4:49573982-49574001 | None:intergenic | 35.0% |
| !! | ACCTTCTAAAGTTGATCCAA+TGG | - | chr6.4:49575660-49575679 | MS.gene94037:intron | 35.0% |
| !! | ATATTTCTCTGCTTTTGAGC+AGG | - | chr6.4:49575027-49575046 | MS.gene94037:intron | 35.0% |
| !! | TTAGTCTTCGTTTTGTTGAC+GGG | - | chr6.4:49575597-49575616 | MS.gene94037:intron | 35.0% |
| !! | TTGCCAAAAGTACTACAACA+TGG | + | chr6.4:49576030-49576049 | None:intergenic | 35.0% |
| !!! | CCTTTTTTATTAGTTCGGGT+CGG | - | chr6.4:49576082-49576101 | MS.gene94037:intron | 35.0% |
| !!! | TGTACATTACCGCTTTGTTT+TGG | - | chr6.4:49574403-49574422 | MS.gene94037:intron | 35.0% |
| !!! | TTCTACTTTTTTGTGGGATG+AGG | - | chr6.4:49576381-49576400 | MS.gene94037:intron | 35.0% |
| AAGAAGGGTCAACAAGAATG+CGG | + | chr6.4:49576212-49576231 | None:intergenic | 40.0% | |
| AATACCCCATGGTACAGTTT+AGG | - | chr6.4:49573693-49573712 | MS.gene94037:intron | 40.0% | |
| ACATGAGGAAGTTAGCCAAT+AGG | - | chr6.4:49577729-49577748 | MS.gene94037:CDS | 40.0% | |
| ACTAGTCGTCAAGAAGATAG+TGG | - | chr6.4:49574365-49574384 | MS.gene94037:intron | 40.0% | |
| AGGATTGGGAAAGCTTCTAA+TGG | - | chr6.4:49574487-49574506 | MS.gene94037:intron | 40.0% | |
| ATACCCCATGGTACAGTTTA+GGG | - | chr6.4:49573694-49573713 | MS.gene94037:intron | 40.0% | |
| ATAGATATCACACCAGATCG+TGG | - | chr6.4:49576527-49576546 | MS.gene94037:intron | 40.0% | |
| CAAATAACCACGTGATGCTA+GGG | + | chr6.4:49575213-49575232 | None:intergenic | 40.0% | |
| CAGTTGTGTGTAACAATCAG+AGG | + | chr6.4:49576429-49576448 | None:intergenic | 40.0% | |
| CCGAAGACTTCGTTATTGTT+TGG | - | chr6.4:49572632-49572651 | MS.gene94037:intron | 40.0% | |
| CCGACCCGAACTAATAAAAA+AGG | + | chr6.4:49576085-49576104 | None:intergenic | 40.0% | |
| CCTACCGCGAACATAAAAAA+GGG | + | chr6.4:49574121-49574140 | None:intergenic | 40.0% | |
| CCTCTTCTTCCAAAACAAAG+CGG | + | chr6.4:49574415-49574434 | None:intergenic | 40.0% | |
| CTACCGCGAACATAAAAAAG+GGG | + | chr6.4:49574120-49574139 | None:intergenic | 40.0% | |
| CTTTGCGAGTAACTGCAAAA+CGG | + | chr6.4:49572165-49572184 | None:intergenic | 40.0% | |
| GAAAGATAGTAGAGTTTGCG+AGG | + | chr6.4:49576257-49576276 | None:intergenic | 40.0% | |
| GATAATGCGGAAAAGAATCG+AGG | + | chr6.4:49572238-49572257 | None:intergenic | 40.0% | |
| GCTTATTCATTGAAATGGGC+GGG | - | chr6.4:49574150-49574169 | MS.gene94037:intron | 40.0% | |
| GTCAACACAGATAGCTCAAA+GGG | + | chr6.4:49575912-49575931 | None:intergenic | 40.0% | |
| GTCCAATGTGAACATGATGA+TGG | - | chr6.4:49576332-49576351 | MS.gene94037:CDS | 40.0% | |
| GTTGAGCATGGATCATTCAT+AGG | - | chr6.4:49573637-49573656 | MS.gene94037:intron | 40.0% | |
| TAACCTTCTCTCTGTTGCAA+CGG | + | chr6.4:49572060-49572079 | None:intergenic | 40.0% | |
| TACCGCGAACATAAAAAAGG+GGG | + | chr6.4:49574119-49574138 | None:intergenic | 40.0% | |
| TAGACTTAAATTGCGCATGG+AGG | + | chr6.4:49576688-49576707 | None:intergenic | 40.0% | |
| TATCGCCGCTTCGAAATTAA+CGG | - | chr6.4:49572254-49572273 | MS.gene94037:intron | 40.0% | |
| TATTGAGCTTATCGCCCAAA+AGG | - | chr6.4:49574514-49574533 | MS.gene94037:intron | 40.0% | |
| TCAACACAGATAGCTCAAAG+GGG | + | chr6.4:49575911-49575930 | None:intergenic | 40.0% | |
| TCCGTCAAAAGATAGCAGTT+TGG | - | chr6.4:49573017-49573036 | MS.gene94037:intron | 40.0% | |
| TCTCCATCTGCATATGAGAA+CGG | + | chr6.4:49575744-49575763 | None:intergenic | 40.0% | |
| TCTTCTTTCTCTTACACCGA+AGG | + | chr6.4:49573993-49574012 | None:intergenic | 40.0% | |
| TGTCGTGCTAACTGTTCAAA+GGG | - | chr6.4:49574798-49574817 | MS.gene94037:intron | 40.0% | |
| TTACCCCTAAACTGTACCAT+GGG | + | chr6.4:49573701-49573720 | None:intergenic | 40.0% | |
| TTACGCATTAAGCCTCTGTT+TGG | - | chr6.4:49572343-49572362 | MS.gene94037:CDS | 40.0% | |
| TTTACCCCTAAACTGTACCA+TGG | + | chr6.4:49573702-49573721 | None:intergenic | 40.0% | |
| TTTCCGTTCTCATATGCAGA+TGG | - | chr6.4:49575738-49575757 | MS.gene94037:intron | 40.0% | |
| ! | ACACTTACAATTTTGCAGGG+GGG | + | chr6.4:49575692-49575711 | None:intergenic | 40.0% |
| ! | ATCAACTTTAGAAGGTGACG+TGG | + | chr6.4:49575656-49575675 | None:intergenic | 40.0% |
| ! | CAATTTTCACAACCTCTCGT+AGG | - | chr6.4:49577211-49577230 | MS.gene94037:intron | 40.0% |
| ! | GAGAAGAGCACAAACCAAAT+AGG | + | chr6.4:49573960-49573979 | None:intergenic | 40.0% |
| ! | GGCTCAAATTAACGGATAAG+TGG | - | chr6.4:49573551-49573570 | MS.gene94037:intron | 40.0% |
| ! | GTGTGTTTAAAGTCAGGACA+TGG | - | chr6.4:49573402-49573421 | MS.gene94037:intron | 40.0% |
| ! | TCATGCTCAGTTGATTGGTT+GGG | + | chr6.4:49576911-49576930 | None:intergenic | 40.0% |
| ! | TCTTCTTGACGACTAGTTGA+AGG | + | chr6.4:49574362-49574381 | None:intergenic | 40.0% |
| !!! | TCTGGTGTTGATACTTTTCC+AGG | - | chr6.4:49577418-49577437 | MS.gene94037:intron | 40.0% |
| AAAACAGTTACGCCACGATC+TGG | + | chr6.4:49576542-49576561 | None:intergenic | 45.0% | |
| AAAGAAAAGTCTGGGGACTC+AGG | - | chr6.4:49576595-49576614 | MS.gene94037:intron | 45.0% | |
| ACGAAGTCTTCGGACATGTT+TGG | + | chr6.4:49572625-49572644 | None:intergenic | 45.0% | |
| ACGCAGACAAGAACAGACAA+TGG | + | chr6.4:49573848-49573867 | None:intergenic | 45.0% | |
| AGTCGAGATAGAATTCCACC+AGG | + | chr6.4:49576780-49576799 | None:intergenic | 45.0% | |
| ATATGGATCTGAGTGGCAAG+AGG | - | chr6.4:49574223-49574242 | MS.gene94037:intron | 45.0% | |
| ATGTTTACCCTAGCATCACG+TGG | - | chr6.4:49575203-49575222 | MS.gene94037:intron | 45.0% | |
| ATTGCGTAACAGGAGAGGAA+AGG | + | chr6.4:49573434-49573453 | None:intergenic | 45.0% | |
| ATTTCGAAGCGGCGATAATG+CGG | + | chr6.4:49572251-49572270 | None:intergenic | 45.0% | |
| CAACCAATCAACTGAGCATG+AGG | - | chr6.4:49576910-49576929 | MS.gene94037:intron | 45.0% | |
| CAATCTAATGGTGCAGTGAG+TGG | + | chr6.4:49575828-49575847 | None:intergenic | 45.0% | |
| CAATGCTAACCTTTCGGCAT+CGG | + | chr6.4:49577602-49577621 | None:intergenic | 45.0% | |
| CCTCTCATAGGACATGACTT+CGG | - | chr6.4:49577043-49577062 | MS.gene94037:intron | 45.0% | |
| CGAGTAACTGCAAAACGGAA+CGG | + | chr6.4:49572160-49572179 | None:intergenic | 45.0% | |
| CTCATGCTCAGTTGATTGGT+TGG | + | chr6.4:49576912-49576931 | None:intergenic | 45.0% | |
| CTCGTGACTCATGACTATAC+AGG | + | chr6.4:49573901-49573920 | None:intergenic | 45.0% | |
| CTCTCATAGGACATGACTTC+GGG | - | chr6.4:49577044-49577063 | MS.gene94037:intron | 45.0% | |
| CTGTCGTGCTAACTGTTCAA+AGG | - | chr6.4:49574797-49574816 | MS.gene94037:intron | 45.0% | |
| CTTAACATGGAAGGGCCATA+TGG | - | chr6.4:49574206-49574225 | MS.gene94037:intron | 45.0% | |
| GCAAATAACCACGTGATGCT+AGG | + | chr6.4:49575214-49575233 | None:intergenic | 45.0% | |
| GCCTACCGCGAACATAAAAA+AGG | + | chr6.4:49574122-49574141 | None:intergenic | 45.0% | |
| GGATTGAAACAACGGACATG+AGG | - | chr6.4:49577714-49577733 | MS.gene94037:CDS | 45.0% | |
| GGTCAACACAGATAGCTCAA+AGG | + | chr6.4:49575913-49575932 | None:intergenic | 45.0% | |
| TACCCCATGGTACAGTTTAG+GGG | - | chr6.4:49573695-49573714 | MS.gene94037:intron | 45.0% | |
| TACCCCTAAACTGTACCATG+GGG | + | chr6.4:49573700-49573719 | None:intergenic | 45.0% | |
| TCACAACCTCTCATAGGACA+CGG | - | chr6.4:49576856-49576875 | MS.gene94037:intron | 45.0% | |
| TCTTGCCACTCAGATCCATA+TGG | + | chr6.4:49574224-49574243 | None:intergenic | 45.0% | |
| TGAGTGGCAAGAGGAAGAAA+AGG | - | chr6.4:49574232-49574251 | MS.gene94037:intron | 45.0% | |
| TTTAAACACACGGAGAGACC+TGG | + | chr6.4:49573393-49573412 | None:intergenic | 45.0% | |
| TTTATCATGAGGGCGAGCAT+TGG | - | chr6.4:49574050-49574069 | MS.gene94037:intron | 45.0% | |
| ! | CATGCTCAGTTGATTGGTTG+GGG | + | chr6.4:49576910-49576929 | None:intergenic | 45.0% |
| ! | CGTTCTGTTGTCTGAGATGT+AGG | - | chr6.4:49573806-49573825 | MS.gene94037:intron | 45.0% |
| ! | CTCTCCGTGTGTTTAAAGTC+AGG | - | chr6.4:49573396-49573415 | MS.gene94037:intron | 45.0% |
| ! | GCTATCTGTGTTGACCATCT+AGG | - | chr6.4:49575917-49575936 | MS.gene94037:intron | 45.0% |
| ! | GTCTGAGATGTAGGCACAAT+TGG | - | chr6.4:49573815-49573834 | MS.gene94037:intron | 45.0% |
| ! | TCAAGAAGATAGTGGTCCCT+TGG | - | chr6.4:49574373-49574392 | MS.gene94037:intron | 45.0% |
| !! | ACACTCGTCATTTTAGGCTC+TGG | + | chr6.4:49573052-49573071 | None:intergenic | 45.0% |
| !! | GATGACAACAGTGTTGACTG+AGG | - | chr6.4:49574331-49574350 | MS.gene94037:intron | 45.0% |
| !! | TCGTCATTTTAGGCTCTGGT+TGG | + | chr6.4:49573048-49573067 | None:intergenic | 45.0% |
| !!! | CCCTTTTTTATGTTCGCGGT+AGG | - | chr6.4:49574118-49574137 | MS.gene94037:CDS | 45.0% |
| !!! | CCGCTTTGTTTTGGAAGAAG+AGG | - | chr6.4:49574412-49574431 | MS.gene94037:intron | 45.0% |
| !!! | GTCCCCCTTTTTTATGTTCG+CGG | - | chr6.4:49574114-49574133 | MS.gene94037:CDS | 45.0% |
| !! | TATATATATATATATATATG+CGG | + | chr6.4:49575112-49575131 | None:intergenic | 5.0% |
| AAGGGCCATATGGATCTGAG+TGG | - | chr6.4:49574216-49574235 | MS.gene94037:intron | 50.0% | |
| AGACGCTTGAGCATAGTGAG+TGG | - | chr6.4:49573576-49573595 | MS.gene94037:intron | 50.0% | |
| AGAGGTCATGACGTTGAGCA+TGG | - | chr6.4:49573625-49573644 | MS.gene94037:intron | 50.0% | |
| ATTTCAGCCTCGTCCTCAGT+TGG | + | chr6.4:49577101-49577120 | None:intergenic | 50.0% | |
| ATTTCAGCCTCGTCGTCAGT+TGG | + | chr6.4:49577457-49577476 | None:intergenic | 50.0% | |
| CACGGAGAGACCTGGAAATA+AGG | + | chr6.4:49573385-49573404 | None:intergenic | 50.0% | |
| CAGCCTCATGCTCAGTTGAT+TGG | + | chr6.4:49576916-49576935 | None:intergenic | 50.0% | |
| CCGAAGTCATGTCCTATGAG+AGG | + | chr6.4:49577046-49577065 | None:intergenic | 50.0% | |
| GAACCCATCCAACCAACTGA+GGG | - | chr6.4:49577266-49577285 | MS.gene94037:intron | 50.0% | |
| GACTATGACGGTTGCAAGTG+TGG | - | chr6.4:49573665-49573684 | MS.gene94037:intron | 50.0% | |
| TATGACGGTTGCAAGTGTGG+CGG | - | chr6.4:49573668-49573687 | MS.gene94037:intron | 50.0% | |
| TCACAACCTCTCGTAGGACA+TGG | - | chr6.4:49577217-49577236 | MS.gene94037:intron | 50.0% | |
| TCGTCCTCAGTTGGTTGGAT+GGG | + | chr6.4:49577092-49577111 | None:intergenic | 50.0% | |
| ! | CTCAGTTGATTGGTTGGGGT+CGG | + | chr6.4:49576906-49576925 | None:intergenic | 50.0% |
| ! | CTCAGTTGGTTGGATGGGTT+CGG | + | chr6.4:49577267-49577286 | None:intergenic | 50.0% |
| ! | GAAGATAGTGGTCCCTTGGT+TGG | - | chr6.4:49574377-49574396 | MS.gene94037:intron | 50.0% |
| ! | GATCTGAAAGTGCAACGTCG+CGG | - | chr6.4:49573598-49573617 | MS.gene94037:intron | 50.0% |
| !! | CGTGAGTTGCATTGGTTCCA+CGG | + | chr6.4:49572031-49572050 | None:intergenic | 50.0% |
| AATCCTTTCCCCTGGACACG+AGG | + | chr6.4:49574473-49574492 | None:intergenic | 55.0% | |
| ACGCCGTTGCAACAGAGAGA+AGG | - | chr6.4:49572054-49572073 | MS.gene94037:intron | 55.0% | |
| ACGTTGATGCCGATGCCGAA+AGG | - | chr6.4:49577590-49577609 | MS.gene94037:intron | 55.0% | |
| ATTTCAGCCTCGCCCTCAGT+TGG | + | chr6.4:49577281-49577300 | None:intergenic | 55.0% | |
| CAGAAGCCATGTCCTACGAG+AGG | + | chr6.4:49577226-49577245 | None:intergenic | 55.0% | |
| CAGAAGCCGTGTCCTATGAG+AGG | + | chr6.4:49576865-49576884 | None:intergenic | 55.0% | |
| CATCCAACCAACTGAGGACG+AGG | - | chr6.4:49577091-49577110 | MS.gene94037:intron | 55.0% | |
| CGAACCCATCCAACCAACTG+AGG | - | chr6.4:49577265-49577284 | MS.gene94037:intron | 55.0% | |
| CGTCCTCAGTTGGTTGGATG+GGG | + | chr6.4:49577091-49577110 | None:intergenic | 55.0% | |
| CGTGTCCAGGGGAAAGGATT+GGG | - | chr6.4:49574473-49574492 | MS.gene94037:intron | 55.0% | |
| CTCAGTTGGTTGGATGGGGT+CGG | + | chr6.4:49577087-49577106 | None:intergenic | 55.0% | |
| CTCGTCCTCAGTTGGTTGGA+TGG | + | chr6.4:49577093-49577112 | None:intergenic | 55.0% | |
| CTCTCATAGGACACGGCTTC+TGG | - | chr6.4:49576863-49576882 | MS.gene94037:intron | 55.0% | |
| CTCTCGTAGGACATGGCTTC+TGG | - | chr6.4:49577224-49577243 | MS.gene94037:intron | 55.0% | |
| GCTTTCCCAATCCTTTCCCC+TGG | + | chr6.4:49574481-49574500 | None:intergenic | 55.0% | |
| GGCGTTGTCGTGAGTTGCAT+TGG | + | chr6.4:49572039-49572058 | None:intergenic | 55.0% | |
| TCGCCCTCAGTTGGTTGGAT+GGG | + | chr6.4:49577272-49577291 | None:intergenic | 55.0% | |
| TCGTGTCCAGGGGAAAGGAT+TGG | - | chr6.4:49574472-49574491 | MS.gene94037:intron | 55.0% | |
| ! | ACGGTGACGTTGGAGCATCT+CGG | + | chr6.4:49572012-49572031 | None:intergenic | 55.0% |
| ! | TGCAGGGGGGTACATACCAT+TGG | + | chr6.4:49575679-49575698 | None:intergenic | 55.0% |
| !! | CATTGGTTCCACGGTGACGT+TGG | + | chr6.4:49572022-49572041 | None:intergenic | 55.0% |
| !! | CTCGTCGTCAGTTGGTTCGT+CGG | + | chr6.4:49577449-49577468 | None:intergenic | 55.0% |
| !! | TCGTCGTCAGTTGGTTCGTC+GGG | + | chr6.4:49577448-49577467 | None:intergenic | 55.0% |
| CAGCCTCGTCCTCAGTTGGT+TGG | + | chr6.4:49577097-49577116 | None:intergenic | 60.0% | |
| CATCCAACCAACTGAGGGCG+AGG | - | chr6.4:49577271-49577290 | MS.gene94037:intron | 60.0% | |
| CGACCCCATCCAACCAACTG+AGG | - | chr6.4:49577085-49577104 | MS.gene94037:intron | 60.0% | |
| CGACGAACCAACTGACGACG+AGG | - | chr6.4:49577447-49577466 | MS.gene94037:intron | 60.0% | |
| CTCGCCCTCAGTTGGTTGGA+TGG | + | chr6.4:49577273-49577292 | None:intergenic | 60.0% | |
| GAGATGCTCCAACGTCACCG+TGG | - | chr6.4:49572011-49572030 | MS.gene94037:CDS | 60.0% | |
| GTGTGGCGGCAAATACCCCA+TGG | - | chr6.4:49573682-49573701 | MS.gene94037:intron | 60.0% | |
| ! | GTGCAACGTCGCGGATTGAG+AGG | - | chr6.4:49573607-49573626 | MS.gene94037:intron | 60.0% |
| ! | GTTGATTGGTTGGGGTCGGC+AGG | + | chr6.4:49576902-49576921 | None:intergenic | 60.0% |
| ! | GTTGGTTGGATGGGTTCGGC+AGG | + | chr6.4:49577263-49577282 | None:intergenic | 60.0% |
| !! | CGTCGTCAGTTGGTTCGTCG+GGG | + | chr6.4:49577447-49577466 | None:intergenic | 60.0% |
| ACAGCTCGAGCCTCGTGTCC+AGG | - | chr6.4:49574460-49574479 | MS.gene94037:intron | 65.0% | |
| AGCTCGAGCCTCGTGTCCAG+GGG | - | chr6.4:49574462-49574481 | MS.gene94037:intron | 65.0% | |
| CAGCCTCGCCCTCAGTTGGT+TGG | + | chr6.4:49577277-49577296 | None:intergenic | 65.0% | |
| CAGCTCGAGCCTCGTGTCCA+GGG | - | chr6.4:49574461-49574480 | MS.gene94037:intron | 65.0% | |
| GAGCCTCGTGTCCAGGGGAA+AGG | - | chr6.4:49574467-49574486 | MS.gene94037:intron | 65.0% | |
| GTTGGTTGGATGGGGTCGGC+AGG | + | chr6.4:49577083-49577102 | None:intergenic | 65.0% | |
| !! | GTTGGTTCGTCGGGGTCACC+TGG | + | chr6.4:49577439-49577458 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 49572002 | 49577775 | 49572002 | ID=MS.gene94037 |
| chr6.4 | mRNA | 49572002 | 49577775 | 49572002 | ID=MS.gene94037.t1;Parent=MS.gene94037 |
| chr6.4 | exon | 49577686 | 49577775 | 49577686 | ID=MS.gene94037.t1.exon1;Parent=MS.gene94037.t1 |
| chr6.4 | CDS | 49577686 | 49577775 | 49577686 | ID=cds.MS.gene94037.t1;Parent=MS.gene94037.t1 |
| chr6.4 | exon | 49577502 | 49577604 | 49577502 | ID=MS.gene94037.t1.exon2;Parent=MS.gene94037.t1 |
| chr6.4 | CDS | 49577502 | 49577604 | 49577502 | ID=cds.MS.gene94037.t1;Parent=MS.gene94037.t1 |
| chr6.4 | exon | 49576304 | 49576383 | 49576304 | ID=MS.gene94037.t1.exon3;Parent=MS.gene94037.t1 |
| chr6.4 | CDS | 49576304 | 49576383 | 49576304 | ID=cds.MS.gene94037.t1;Parent=MS.gene94037.t1 |
| chr6.4 | exon | 49575242 | 49575571 | 49575242 | ID=MS.gene94037.t1.exon4;Parent=MS.gene94037.t1 |
| chr6.4 | CDS | 49575242 | 49575571 | 49575242 | ID=cds.MS.gene94037.t1;Parent=MS.gene94037.t1 |
| chr6.4 | exon | 49574917 | 49574993 | 49574917 | ID=MS.gene94037.t1.exon5;Parent=MS.gene94037.t1 |
| chr6.4 | CDS | 49574917 | 49574993 | 49574917 | ID=cds.MS.gene94037.t1;Parent=MS.gene94037.t1 |
| chr6.4 | exon | 49574096 | 49574138 | 49574096 | ID=MS.gene94037.t1.exon6;Parent=MS.gene94037.t1 |
| chr6.4 | CDS | 49574096 | 49574138 | 49574096 | ID=cds.MS.gene94037.t1;Parent=MS.gene94037.t1 |
| chr6.4 | exon | 49573958 | 49574020 | 49573958 | ID=MS.gene94037.t1.exon7;Parent=MS.gene94037.t1 |
| chr6.4 | CDS | 49573958 | 49574020 | 49573958 | ID=cds.MS.gene94037.t1;Parent=MS.gene94037.t1 |
| chr6.4 | exon | 49572834 | 49572905 | 49572834 | ID=MS.gene94037.t1.exon8;Parent=MS.gene94037.t1 |
| chr6.4 | CDS | 49572834 | 49572905 | 49572834 | ID=cds.MS.gene94037.t1;Parent=MS.gene94037.t1 |
| chr6.4 | exon | 49572653 | 49572724 | 49572653 | ID=MS.gene94037.t1.exon9;Parent=MS.gene94037.t1 |
| chr6.4 | CDS | 49572653 | 49572724 | 49572653 | ID=cds.MS.gene94037.t1;Parent=MS.gene94037.t1 |
| chr6.4 | exon | 49572473 | 49572544 | 49572473 | ID=MS.gene94037.t1.exon10;Parent=MS.gene94037.t1 |
| chr6.4 | CDS | 49572473 | 49572544 | 49572473 | ID=cds.MS.gene94037.t1;Parent=MS.gene94037.t1 |
| chr6.4 | exon | 49572297 | 49572368 | 49572297 | ID=MS.gene94037.t1.exon11;Parent=MS.gene94037.t1 |
| chr6.4 | CDS | 49572297 | 49572368 | 49572297 | ID=cds.MS.gene94037.t1;Parent=MS.gene94037.t1 |
| chr6.4 | exon | 49572166 | 49572197 | 49572166 | ID=MS.gene94037.t1.exon12;Parent=MS.gene94037.t1 |
| chr6.4 | CDS | 49572166 | 49572197 | 49572166 | ID=cds.MS.gene94037.t1;Parent=MS.gene94037.t1 |
| chr6.4 | exon | 49572002 | 49572062 | 49572002 | ID=MS.gene94037.t1.exon13;Parent=MS.gene94037.t1 |
| chr6.4 | CDS | 49572002 | 49572062 | 49572002 | ID=cds.MS.gene94037.t1;Parent=MS.gene94037.t1 |
| Gene Sequence |
| Protein sequence |
