AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene94241

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94241.t1 MTR_5g082700 93.820 712 20 2 1 688 1 712 0.0 1371
MS.gene94241.t1 MTR_5g082700 93.712 652 17 2 1 628 1 652 0.0 1247
MS.gene94241.t1 MTR_5g082700 93.223 605 17 2 1 581 1 605 0.0 1148
MS.gene94241.t1 MTR_6g074905 55.729 384 134 4 322 688 807 1171 4.71e-140 439
MS.gene94241.t1 MTR_0349s0030 67.932 237 76 0 452 688 55 291 8.17e-117 352
MS.gene94241.t1 MTR_6g074870 53.628 317 106 5 322 633 67 347 4.70e-105 324
MS.gene94241.t1 MTR_6g074640 38.050 318 96 9 381 688 11 237 7.64e-52 179
MS.gene94241.t1 MTR_6g074750 79.000 100 21 0 486 585 18 117 3.26e-51 173
MS.gene94241.t1 MTR_8g069620 54.430 158 50 1 371 506 14 171 1.86e-45 161
MS.gene94241.t1 MTR_8g070930 32.578 353 160 9 400 682 138 482 3.48e-42 165
MS.gene94241.t1 MTR_1g111180 32.219 329 174 8 396 682 670 991 9.23e-41 160
MS.gene94241.t1 MTR_1g111180 32.219 329 174 8 396 682 671 992 9.49e-41 160
MS.gene94241.t1 MTR_3g109390 29.080 337 187 4 393 681 44 376 3.54e-39 149
MS.gene94241.t1 MTR_3g109390 29.080 337 187 4 393 681 66 398 4.05e-39 149
MS.gene94241.t1 MTR_3g109390 29.377 337 184 5 393 681 66 396 2.51e-38 147
MS.gene94241.t1 MTR_4g104620 28.701 331 183 6 397 678 94 420 1.36e-36 142
MS.gene94241.t1 MTR_3g109390 29.664 327 176 5 403 679 61 383 3.70e-36 140
MS.gene94241.t1 MTR_3g109390 29.664 327 176 5 403 679 83 405 5.45e-36 140
MS.gene94241.t1 MTR_4g104620 28.972 321 175 6 407 678 1 317 8.71e-35 135
MS.gene94241.t1 MTR_4g104620 28.972 321 175 6 407 678 10 326 1.03e-34 135
MS.gene94241.t1 MTR_3g076540 28.571 336 187 7 393 679 86 417 2.14e-33 133
MS.gene94241.t1 MTR_3g076540 28.614 332 184 7 397 679 8 335 3.59e-33 131
MS.gene94241.t1 MTR_3g076540 28.571 322 177 7 407 679 1 318 1.13e-31 126
MS.gene94241.t1 MTR_3g086530 26.901 342 195 6 392 682 84 421 2.21e-31 127
MS.gene94241.t1 MTR_3g086530 28.727 275 146 4 392 620 84 354 5.49e-31 125
MS.gene94241.t1 MTR_3g076540 27.746 346 189 8 393 681 86 427 7.03e-31 126
MS.gene94241.t1 MTR_3g109390 30.153 262 136 3 393 611 66 323 6.99e-30 121
MS.gene94241.t1 MTR_4g117490 28.485 330 165 11 398 686 22 321 1.55e-28 121
MS.gene94241.t1 MTR_3g086530 27.687 307 167 6 427 682 2 304 4.01e-28 115
MS.gene94241.t1 MTR_4g117490 28.485 330 165 11 398 686 22 321 5.27e-28 119
MS.gene94241.t1 MTR_5g091680 29.091 330 163 10 398 686 19 318 8.40e-28 118
MS.gene94241.t1 MTR_5g091680 29.091 330 163 10 398 686 17 316 8.48e-28 118
MS.gene94241.t1 MTR_5g091680 29.091 330 163 10 398 686 19 318 9.26e-28 117
MS.gene94241.t1 MTR_5g091680 29.091 330 163 10 398 686 19 318 9.73e-28 118
MS.gene94241.t1 MTR_2g021330 28.399 331 164 12 398 686 22 321 2.00e-27 117
MS.gene94241.t1 MTR_2g021330 28.399 331 164 12 398 686 22 321 2.28e-27 115
MS.gene94241.t1 MTR_3g089510 29.129 333 159 11 398 686 22 321 3.70e-27 117
MS.gene94241.t1 MTR_3g089510 29.129 333 159 11 398 686 10 309 4.36e-27 117
MS.gene94241.t1 MTR_7g110060 28.750 320 152 10 401 680 75 358 1.48e-26 113
MS.gene94241.t1 MTR_6g079470 30.488 328 151 12 398 681 86 380 1.60e-26 115
MS.gene94241.t1 MTR_1g086370 28.660 321 153 10 401 681 42 326 2.63e-26 112
MS.gene94241.t1 MTR_1g086370 28.750 320 152 10 401 680 75 358 2.75e-26 112
MS.gene94241.t1 MTR_8g106960 27.640 322 168 10 398 681 115 409 3.69e-26 114
MS.gene94241.t1 MTR_2g072840 27.859 341 175 11 387 686 11 321 3.69e-26 114
MS.gene94241.t1 MTR_8g106960 27.640 322 168 10 398 681 115 409 5.50e-26 113
MS.gene94241.t1 MTR_4g087620 28.571 308 167 9 407 685 61 344 5.68e-26 110
MS.gene94241.t1 MTR_8g432510 25.700 393 196 12 335 682 83 424 7.08e-26 112
MS.gene94241.t1 MTR_3g086530 29.185 233 115 4 392 578 84 312 7.75e-26 108
MS.gene94241.t1 MTR_2g072840 27.859 341 175 11 387 686 11 321 1.11e-25 111
MS.gene94241.t1 MTR_3g086530 29.644 253 144 5 460 682 1 249 1.66e-25 106
MS.gene94241.t1 MTR_8g461040 28.182 330 166 10 398 686 23 322 2.25e-25 111
MS.gene94241.t1 MTR_7g076030 27.346 373 211 14 336 681 86 425 2.28e-25 110
MS.gene94241.t1 MTR_1g084760 27.726 321 156 10 401 681 75 359 4.73e-25 108
MS.gene94241.t1 MTR_4g061320 29.752 242 142 7 450 686 113 331 3.44e-24 105
MS.gene94241.t1 MTR_3g112210 27.760 317 174 10 400 685 31 323 4.59e-24 105
MS.gene94241.t1 MTR_7g076030 28.618 304 169 11 401 678 34 315 8.89e-24 103
MS.gene94241.t1 MTR_2g016490 27.445 317 162 10 401 681 40 324 9.99e-24 104
MS.gene94241.t1 MTR_8g098845 27.742 310 172 11 407 687 58 344 1.06e-23 104
MS.gene94241.t1 MTR_7g110060 28.205 312 148 10 401 672 75 350 1.44e-23 103
MS.gene94241.t1 MTR_8g071230 28.013 307 178 10 400 685 3 287 2.26e-23 104
MS.gene94241.t1 MTR_8g086000 28.631 241 137 7 454 685 109 323 2.75e-23 102
MS.gene94241.t1 MTR_2g083940 28.037 321 155 11 401 681 88 372 2.88e-23 103
MS.gene94241.t1 MTR_8g086000 28.631 241 137 7 454 685 152 366 3.07e-23 103
MS.gene94241.t1 MTR_2g083940 28.037 321 155 11 401 681 34 318 3.60e-23 102
MS.gene94241.t1 MTR_2g005620 28.660 321 152 12 402 681 90 374 4.20e-23 103
MS.gene94241.t1 MTR_5g026960 28.339 307 177 10 400 685 3 287 6.66e-23 102
MS.gene94241.t1 MTR_6g074670 48.454 97 50 0 572 668 26 122 6.80e-23 95.1
MS.gene94241.t1 MTR_8g028720 26.710 307 175 9 407 685 43 327 1.02e-22 100
MS.gene94241.t1 MTR_8g012450 29.221 308 169 12 401 684 4 286 1.39e-22 101
MS.gene94241.t1 MTR_5g010030 27.922 308 170 10 407 685 47 331 1.59e-22 100
MS.gene94241.t1 MTR_7g078690 27.036 307 174 9 407 685 44 328 1.74e-22 100
MS.gene94241.t1 MTR_8g012450 29.221 308 169 12 401 684 4 286 1.80e-22 101
MS.gene94241.t1 MTR_2g072840 29.150 247 134 8 454 686 12 231 1.95e-22 102
MS.gene94241.t1 MTR_1g086370 30.579 242 114 8 457 680 34 239 2.50e-21 95.5
MS.gene94241.t1 MTR_3g460950 25.000 316 177 10 400 682 31 319 2.98e-21 96.7
MS.gene94241.t1 MTR_3g060330 25.000 316 177 10 400 682 31 319 2.98e-21 96.7
MS.gene94241.t1 MTR_4g087620 32.039 206 105 7 407 585 61 258 1.84e-20 92.4
MS.gene94241.t1 MTR_4g007750 26.769 325 183 11 400 687 3 309 2.78e-20 92.8
MS.gene94241.t1 MTR_4g103810 27.742 310 179 10 401 681 218 511 5.01e-20 94.7
MS.gene94241.t1 MTR_3g085650 30.833 240 144 9 451 684 487 710 1.02e-19 94.4
MS.gene94241.t1 MTR_3g085650 30.833 240 144 9 451 684 487 710 1.19e-19 94.4
MS.gene94241.t1 MTR_3g085650 30.833 240 144 9 451 684 487 710 1.25e-19 94.4
MS.gene94241.t1 MTR_4g103810 27.742 310 179 10 401 681 108 401 1.40e-19 92.4
MS.gene94241.t1 MTR_4g056390 31.953 169 101 5 522 682 317 479 2.13e-19 92.8
MS.gene94241.t1 MTR_5g024270 31.325 166 101 5 526 682 254 415 3.03e-19 91.7
MS.gene94241.t1 MTR_3g098760 27.119 295 173 7 407 678 103 378 5.28e-19 91.7
MS.gene94241.t1 MTR_1g075610 26.059 307 175 9 405 680 22 307 9.04e-19 88.2
MS.gene94241.t1 MTR_2g084555 32.544 169 100 6 522 682 316 478 2.43e-18 89.4
MS.gene94241.t1 MTR_4g094430 25.828 302 181 9 400 678 3 284 4.13e-18 85.9
MS.gene94241.t1 MTR_8g073250 31.098 164 101 4 526 681 251 410 4.53e-18 87.8
MS.gene94241.t1 MTR_2g085200 27.986 293 169 9 407 676 140 413 5.23e-18 89.0
MS.gene94241.t1 MTR_4g118780 26.059 307 185 8 393 676 96 383 1.40e-17 87.0
MS.gene94241.t1 MTR_1g061690 29.775 178 111 5 513 682 308 479 1.85e-17 86.7
MS.gene94241.t1 MTR_5g008860 26.756 299 165 11 407 676 146 419 2.43e-17 86.7
MS.gene94241.t1 MTR_7g011800 26.280 293 175 9 407 676 126 400 2.48e-17 86.7
MS.gene94241.t1 MTR_2g032060 25.000 304 181 10 400 678 3 284 4.11e-17 82.8
MS.gene94241.t1 MTR_4g061130 27.273 308 157 12 407 685 45 314 4.17e-17 84.0
MS.gene94241.t1 MTR_3g460980 26.000 300 164 12 400 682 31 289 4.37e-17 83.6
MS.gene94241.t1 MTR_8g099770 29.032 217 127 6 407 600 96 308 4.42e-17 85.5
MS.gene94241.t1 MTR_1g090917 27.727 220 125 6 408 597 58 273 5.55e-17 84.7
MS.gene94241.t1 MTR_4g109090 25.510 294 175 9 407 676 111 384 7.39e-17 85.1
MS.gene94241.t1 MTR_1g090917 27.727 220 125 6 408 597 58 273 8.68e-17 84.3
MS.gene94241.t1 MTR_3g060390 25.676 296 166 11 400 682 31 285 1.00e-16 82.4
MS.gene94241.t1 MTR_5g075100 27.044 318 155 14 397 688 19 285 1.02e-16 83.6
MS.gene94241.t1 MTR_3g096960 28.926 242 144 9 454 678 95 325 1.72e-16 83.2
MS.gene94241.t1 MTR_7g072575 31.250 224 131 9 394 597 5 225 2.06e-16 82.8
MS.gene94241.t1 MTR_6g080470 26.490 302 182 11 397 678 10 291 2.56e-16 82.0
MS.gene94241.t1 MTR_1g048630 26.493 268 156 8 400 634 6 265 3.85e-16 83.6
MS.gene94241.t1 MTR_1g105290 27.244 312 158 11 400 685 54 322 6.26e-16 81.6
MS.gene94241.t1 MTR_1g105290 27.244 312 158 11 400 685 54 322 6.78e-16 82.0
MS.gene94241.t1 MTR_1g105290 27.244 312 158 11 400 685 54 322 8.19e-16 81.6
MS.gene94241.t1 MTR_8g086380 30.734 218 127 9 395 590 20 235 8.90e-16 81.3
MS.gene94241.t1 MTR_8g092290 29.545 220 122 7 407 600 147 359 1.21e-15 81.3
MS.gene94241.t1 MTR_6g013030 26.557 305 176 11 398 676 107 389 1.82e-15 80.5
MS.gene94241.t1 MTR_4g131060 27.234 235 137 8 387 595 4 230 7.23e-15 77.8
MS.gene94241.t1 MTR_1g081870 29.493 217 126 7 407 600 128 340 9.22e-15 78.2
MS.gene94241.t1 MTR_3g085650 35.766 137 77 4 451 583 487 616 1.11e-14 78.2
MS.gene94241.t1 MTR_4g029020 28.571 224 137 7 394 597 5 225 1.48e-14 77.0
MS.gene94241.t1 MTR_1g040875 28.054 221 136 7 396 595 19 237 1.60e-14 76.6
MS.gene94241.t1 MTR_4g107280 26.908 249 132 12 401 610 89 326 1.75e-14 76.6
MS.gene94241.t1 MTR_7g073520 27.404 208 116 8 401 583 148 345 4.79e-14 75.5
MS.gene94241.t1 MTR_1g090917 30.070 143 77 3 476 597 8 148 5.92e-14 74.3
MS.gene94241.t1 MTR_1g090917 30.070 143 77 3 476 597 8 148 7.72e-14 73.9
MS.gene94241.t1 MTR_3g072320 27.228 202 127 5 395 578 6 205 8.68e-14 74.3
MS.gene94241.t1 MTR_6g074835 50.000 62 31 0 581 642 63 124 8.81e-14 68.9
MS.gene94241.t1 MTR_4g128820 28.708 209 129 6 399 589 8 214 1.16e-13 74.3
MS.gene94241.t1 MTR_4g019410 28.251 223 137 9 394 596 12 231 1.19e-13 74.7
MS.gene94241.t1 MTR_3g054080 25.402 311 188 12 397 684 10 299 1.45e-13 73.6
MS.gene94241.t1 MTR_4g019410 28.251 223 137 9 394 596 12 231 1.72e-13 74.3
MS.gene94241.t1 MTR_2g045470 29.665 209 124 6 396 583 15 221 2.51e-13 73.2
MS.gene94241.t1 MTR_1g080020 28.319 226 125 7 397 596 5 219 3.27e-13 70.9
MS.gene94241.t1 MTR_2g105010 23.779 307 168 11 395 681 8 268 3.72e-13 72.4
MS.gene94241.t1 MTR_5g017140 29.798 198 93 5 490 684 111 265 3.95e-13 71.2
MS.gene94241.t1 MTR_8g093730 25.157 318 170 11 386 681 284 555 5.33e-13 72.8
MS.gene94241.t1 MTR_4g107280 29.870 154 84 6 476 610 139 287 5.84e-13 71.6
MS.gene94241.t1 MTR_1g101630 25.407 307 157 11 400 681 40 299 6.81e-13 72.0
MS.gene94241.t1 MTR_1g103760 30.049 203 120 8 396 578 7 207 6.97e-13 71.6
MS.gene94241.t1 MTR_6g074480 58.696 46 19 0 643 688 30 75 7.18e-13 64.7
MS.gene94241.t1 MTR_4g049730 26.549 226 119 6 464 687 75 255 8.91e-13 71.2
MS.gene94241.t1 MTR_8g024100 25.792 221 141 6 397 597 11 228 1.32e-12 71.6
MS.gene94241.t1 MTR_3g099767 28.000 200 128 5 401 588 112 307 2.76e-12 70.1
MS.gene94241.t1 MTR_3g099920 26.421 299 156 13 401 681 19 271 3.92e-12 69.7
MS.gene94241.t1 MTR_5g023150 28.718 195 106 9 426 594 221 408 4.52e-12 69.3
MS.gene94241.t1 MTR_5g023150 28.718 195 106 9 426 594 318 505 7.04e-12 68.9
MS.gene94241.t1 MTR_5g067150 28.972 214 125 10 391 583 1 208 9.87e-12 68.2
MS.gene94241.t1 MTR_5g067150 28.972 214 125 10 391 583 1 208 1.02e-11 67.8
MS.gene94241.t1 MTR_1g099110 27.136 199 114 7 419 595 282 471 1.14e-11 68.2
MS.gene94241.t1 MTR_3g026250 29.130 230 123 11 400 592 26 252 1.30e-11 68.2
MS.gene94241.t1 MTR_5g067150 28.972 214 125 10 391 583 1 208 1.35e-11 67.4
MS.gene94241.t1 MTR_3g095620 32.710 214 123 10 401 595 25 236 1.42e-11 66.2
MS.gene94241.t1 MTR_2g088020 40.860 93 45 4 490 579 110 195 1.43e-11 67.4
MS.gene94241.t1 MTR_1g099110 27.136 199 114 7 419 595 299 488 1.98e-11 67.8
MS.gene94241.t1 MTR_6g012980 26.587 252 126 9 441 680 120 324 2.03e-11 67.0
MS.gene94241.t1 MTR_1g050690 33.171 205 97 11 403 578 419 612 2.27e-11 67.4
MS.gene94241.t1 MTR_5g088350 28.638 213 123 9 398 585 10 218 2.91e-11 66.6
MS.gene94241.t1 MTR_5g088350 28.638 213 123 9 398 585 10 218 3.55e-11 65.5
MS.gene94241.t1 MTR_3g056010 28.448 232 127 11 399 601 26 247 5.40e-11 64.7
MS.gene94241.t1 MTR_3g056025 28.448 232 127 11 399 601 26 247 6.09e-11 64.3
MS.gene94241.t1 MTR_4g074875 28.293 205 112 6 400 578 19 214 6.28e-11 66.6
MS.gene94241.t1 MTR_4g074875 28.293 205 112 6 400 578 19 214 6.92e-11 66.2
MS.gene94241.t1 MTR_5g088350 28.638 213 123 9 398 585 10 218 7.65e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94241.t1 AT2G40120 72.781 338 70 1 367 682 227 564 3.05e-179 522
MS.gene94241.t1 AT2G40120 47.283 184 74 7 3 184 1 163 4.04e-22 101
MS.gene94241.t1 AT1G73460 61.780 382 121 3 332 688 786 1167 6.30e-162 497
MS.gene94241.t1 AT1G73460 61.780 382 121 3 332 688 786 1167 6.30e-162 497
MS.gene94241.t1 AT1G73450 64.943 348 100 1 363 688 803 1150 1.80e-160 493
MS.gene94241.t1 AT3G17750 62.432 370 115 2 343 688 767 1136 1.87e-156 482
MS.gene94241.t1 AT5G35980 33.143 350 162 8 400 682 121 465 5.94e-43 167
MS.gene94241.t1 AT5G35980 33.143 350 162 8 400 682 86 430 6.59e-43 167
MS.gene94241.t1 AT5G35980 33.143 350 162 8 400 682 121 465 7.74e-43 166
MS.gene94241.t1 AT3G25840 32.537 335 165 9 396 682 350 671 4.44e-40 157
MS.gene94241.t1 AT3G25840 32.537 335 165 9 396 682 612 933 5.15e-40 158
MS.gene94241.t1 AT4G03175 65.591 93 32 0 590 682 1 93 5.49e-39 139
MS.gene94241.t1 AT4G24740 29.217 332 182 7 400 682 59 386 1.79e-37 144
MS.gene94241.t1 AT4G24740 29.217 332 182 7 400 682 97 424 2.95e-37 145
MS.gene94241.t1 AT1G13350 29.909 331 186 9 393 682 434 759 2.18e-36 146
MS.gene94241.t1 AT1G13350 29.909 331 186 9 393 682 461 786 3.15e-36 146
MS.gene94241.t1 AT1G13350 29.909 331 186 9 393 682 507 832 4.89e-36 145
MS.gene94241.t1 AT4G24740 29.231 325 177 7 407 682 1 321 6.20e-36 138
MS.gene94241.t1 AT4G24740 29.231 325 177 7 407 682 1 321 6.20e-36 138
MS.gene94241.t1 AT4G24740 29.231 325 177 7 407 682 1 321 6.20e-36 138
MS.gene94241.t1 AT3G53570 28.863 343 188 7 392 682 106 444 7.52e-36 141
MS.gene94241.t1 AT3G53570 28.863 343 188 7 392 682 106 444 7.52e-36 141
MS.gene94241.t1 AT3G53570 28.863 343 188 7 392 682 106 444 7.52e-36 141
MS.gene94241.t1 AT3G53570 28.863 343 188 7 392 682 92 430 7.84e-36 141
MS.gene94241.t1 AT3G53570 28.863 343 188 7 392 682 92 430 7.84e-36 141
MS.gene94241.t1 AT4G32660 30.178 338 183 5 393 681 63 396 8.01e-35 137
MS.gene94241.t1 AT4G32660 30.178 338 183 5 393 681 55 388 8.63e-35 137
MS.gene94241.t1 AT3G53640 29.394 330 189 7 393 682 315 640 9.05e-35 140
MS.gene94241.t1 AT4G24740 31.102 254 127 4 400 609 97 346 2.57e-31 125
MS.gene94241.t1 AT4G32660 31.973 294 150 6 425 681 4 284 5.29e-31 123
MS.gene94241.t1 AT4G24740 31.174 247 122 4 407 609 1 243 3.94e-30 119
MS.gene94241.t1 AT4G32660 32.103 271 136 4 393 619 63 329 5.27e-30 122
MS.gene94241.t1 AT5G19010 30.000 320 153 11 398 676 22 311 1.18e-29 124
MS.gene94241.t1 AT4G24740 33.175 211 113 5 500 682 8 218 7.13e-29 115
MS.gene94241.t1 AT4G24740 33.175 211 113 5 500 682 8 218 7.13e-29 115
MS.gene94241.t1 AT3G14720 29.091 330 163 12 398 686 22 321 9.92e-27 115
MS.gene94241.t1 AT2G42880 29.429 333 158 11 398 686 22 321 3.22e-26 113
MS.gene94241.t1 AT5G14640 29.412 306 170 10 401 681 74 358 3.67e-26 112
MS.gene94241.t1 AT5G14640 29.412 306 170 10 401 681 74 358 3.67e-26 112
MS.gene94241.t1 AT4G18710 29.022 317 157 10 401 681 40 324 4.42e-26 111
MS.gene94241.t1 AT2G42880 29.730 333 157 12 398 686 22 321 4.53e-26 114
MS.gene94241.t1 AT3G14720 29.091 330 163 12 398 686 22 321 4.56e-26 112
MS.gene94241.t1 AT3G14720 29.091 330 163 12 398 686 22 321 4.56e-26 112
MS.gene94241.t1 AT3G18040 28.923 325 160 11 398 681 20 314 6.42e-26 112
MS.gene94241.t1 AT3G18040 28.923 325 160 11 398 681 129 423 6.98e-26 113
MS.gene94241.t1 AT3G18040 28.923 325 160 11 398 681 15 309 7.46e-26 112
MS.gene94241.t1 AT3G59790 28.975 283 169 6 410 682 86 346 7.73e-26 110
MS.gene94241.t1 AT1G53510 27.576 330 168 10 398 686 22 321 1.01e-25 112
MS.gene94241.t1 AT3G18040 28.923 325 160 11 398 681 129 423 1.53e-25 112
MS.gene94241.t1 AT4G00720 26.515 396 193 15 341 681 70 422 2.57e-25 110
MS.gene94241.t1 AT3G61160 29.221 308 168 11 401 681 102 386 3.59e-25 109
MS.gene94241.t1 AT3G61160 29.221 308 168 11 401 681 102 386 4.09e-25 108
MS.gene94241.t1 AT3G61160 29.221 308 168 11 401 681 109 393 4.21e-25 109
MS.gene94241.t1 AT2G01450 26.935 323 169 11 398 681 13 307 4.64e-25 109
MS.gene94241.t1 AT2G01450 26.935 323 169 11 398 681 13 307 4.64e-25 109
MS.gene94241.t1 AT2G01450 26.935 323 169 11 398 681 13 307 4.64e-25 109
MS.gene94241.t1 AT2G01450 26.935 323 169 11 398 681 13 307 4.64e-25 109
MS.gene94241.t1 AT5G26751 27.726 321 156 10 401 681 69 353 6.84e-25 108
MS.gene94241.t1 AT1G73670 27.926 376 192 15 352 682 41 382 6.91e-25 110
MS.gene94241.t1 AT4G24740 29.596 223 109 4 400 578 97 315 8.74e-25 106
MS.gene94241.t1 AT2G43790 28.431 306 170 8 407 685 69 352 8.94e-25 107
MS.gene94241.t1 AT4G01370 28.013 307 171 9 407 685 49 333 1.27e-24 107
MS.gene94241.t1 AT3G45640 28.339 307 170 9 407 685 44 328 1.53e-24 106
MS.gene94241.t1 AT3G05840 27.414 321 157 10 401 681 73 357 2.16e-24 106
MS.gene94241.t1 AT3G05840 27.414 321 157 10 401 681 73 357 2.16e-24 106
MS.gene94241.t1 AT1G18150 28.399 331 166 11 398 687 101 401 8.64e-24 106
MS.gene94241.t1 AT1G18150 28.399 331 166 11 398 687 101 401 8.64e-24 106
MS.gene94241.t1 AT1G18150 28.399 331 166 11 398 687 101 401 8.64e-24 106
MS.gene94241.t1 AT1G06390 27.500 320 164 10 401 684 70 357 9.90e-24 104
MS.gene94241.t1 AT1G06390 27.500 320 164 10 401 684 70 357 9.90e-24 104
MS.gene94241.t1 AT4G11330 28.571 308 168 11 407 685 49 333 1.15e-23 103
MS.gene94241.t1 AT2G30980 27.812 320 163 10 401 684 72 359 1.16e-23 104
MS.gene94241.t1 AT1G07880 27.653 311 173 10 405 686 37 324 1.28e-23 103
MS.gene94241.t1 AT2G46070 28.477 302 170 8 407 682 81 362 2.90e-23 103
MS.gene94241.t1 AT2G46070 28.713 303 168 8 407 682 47 328 2.94e-23 102
MS.gene94241.t1 AT1G01560 28.247 308 171 10 407 686 46 331 2.95e-23 102
MS.gene94241.t1 AT3G61160 29.845 258 134 9 401 618 102 352 3.06e-23 102
MS.gene94241.t1 AT3G61160 28.727 275 149 9 401 635 102 369 3.08e-23 102
MS.gene94241.t1 AT3G61160 29.845 258 134 9 401 618 109 359 3.86e-23 102
MS.gene94241.t1 AT4G18710 31.982 222 126 7 401 600 34 252 5.32e-23 99.8
MS.gene94241.t1 AT1G67580 27.877 391 220 14 329 684 337 700 1.41e-22 103
MS.gene94241.t1 AT1G67580 27.877 391 220 14 329 684 337 700 1.41e-22 103
MS.gene94241.t1 AT4G19110 28.013 307 178 9 400 685 3 287 2.04e-22 101
MS.gene94241.t1 AT4G19110 28.013 307 178 9 400 685 3 287 2.26e-22 101
MS.gene94241.t1 AT1G57870 30.738 244 127 9 392 600 64 300 2.45e-22 100
MS.gene94241.t1 AT1G57870 30.738 244 127 9 392 600 64 300 2.45e-22 100
MS.gene94241.t1 AT1G57870 30.738 244 127 9 392 600 64 300 2.45e-22 100
MS.gene94241.t1 AT1G09840 30.328 244 128 9 392 600 65 301 4.45e-22 100
MS.gene94241.t1 AT1G09840 30.328 244 128 9 392 600 65 301 4.45e-22 100
MS.gene94241.t1 AT1G09840 30.328 244 128 9 392 600 65 301 4.45e-22 100
MS.gene94241.t1 AT1G09840 30.328 244 128 9 392 600 65 301 4.45e-22 100
MS.gene94241.t1 AT1G09840 30.328 244 128 9 392 600 65 301 4.45e-22 100
MS.gene94241.t1 AT1G09840 30.328 244 128 9 392 600 65 301 4.45e-22 100
MS.gene94241.t1 AT1G09840 30.328 244 128 9 392 600 65 301 4.45e-22 100
MS.gene94241.t1 AT1G09840 30.328 244 128 9 392 600 65 301 4.45e-22 100
MS.gene94241.t1 AT1G09840 30.328 244 128 9 392 600 65 301 4.45e-22 100
MS.gene94241.t1 AT1G09840 30.328 244 128 9 392 600 65 301 4.45e-22 100
MS.gene94241.t1 AT3G18040 30.165 242 128 8 454 681 12 226 4.92e-22 99.8
MS.gene94241.t1 AT1G57870 30.738 244 127 9 392 600 64 300 6.06e-22 99.8
MS.gene94241.t1 AT4G13020 28.289 304 175 8 400 682 3 284 8.10e-22 99.0
MS.gene94241.t1 AT4G13020 28.289 304 175 8 400 682 3 284 9.72e-22 99.0
MS.gene94241.t1 AT4G13020 27.961 304 176 8 400 682 3 284 1.03e-21 98.6
MS.gene94241.t1 AT4G13020 27.961 304 176 8 400 682 3 284 1.03e-21 98.2
MS.gene94241.t1 AT4G13020 27.961 304 176 8 400 682 11 292 2.08e-21 98.2
MS.gene94241.t1 AT4G13020 27.961 304 176 8 400 682 11 292 2.10e-21 98.2
MS.gene94241.t1 AT5G45430 28.115 313 170 11 400 685 3 287 4.35e-21 97.8
MS.gene94241.t1 AT5G45430 28.115 313 170 11 400 685 3 287 5.32e-21 97.4
MS.gene94241.t1 AT2G46070 31.982 222 120 5 407 603 47 262 5.61e-21 95.1
MS.gene94241.t1 AT2G38620 26.543 324 185 8 400 687 3 309 6.90e-21 94.4
MS.gene94241.t1 AT1G59580 25.857 321 175 11 400 685 31 323 7.14e-21 95.5
MS.gene94241.t1 AT1G59580 25.857 321 175 11 400 685 31 323 7.14e-21 95.5
MS.gene94241.t1 AT1G01560 34.146 205 100 8 407 584 46 242 2.18e-20 92.4
MS.gene94241.t1 AT1G01560 34.146 205 100 8 407 584 46 242 2.18e-20 92.4
MS.gene94241.t1 AT4G13020 27.157 313 176 8 400 682 3 293 2.23e-20 94.4
MS.gene94241.t1 AT4G13020 27.476 313 175 8 400 682 3 293 2.37e-20 95.1
MS.gene94241.t1 AT1G01560 33.036 224 115 8 407 603 46 261 2.44e-20 93.6
MS.gene94241.t1 AT2G18170 26.019 319 177 10 400 685 31 323 2.58e-20 94.0
MS.gene94241.t1 AT4G35500 31.765 170 94 5 526 682 257 417 3.34e-20 94.4
MS.gene94241.t1 AT1G54610 28.231 294 169 8 407 677 124 398 3.56e-20 95.5
MS.gene94241.t1 AT1G54610 28.231 294 169 8 407 677 124 398 3.56e-20 95.5
MS.gene94241.t1 AT1G54610 28.231 294 169 8 407 677 124 398 3.56e-20 95.5
MS.gene94241.t1 AT4G36450 28.632 234 135 7 454 681 109 316 3.80e-20 93.2
MS.gene94241.t1 AT4G35500 31.765 170 94 5 526 682 258 418 4.79e-20 94.0
MS.gene94241.t1 AT5G22840 30.682 176 108 6 521 688 308 477 7.10e-20 94.4
MS.gene94241.t1 AT1G03740 27.371 369 189 15 360 676 151 492 8.45e-20 94.7
MS.gene94241.t1 AT1G03740 27.371 369 189 15 360 676 151 492 9.05e-20 94.7
MS.gene94241.t1 AT5G63370 26.586 331 182 13 395 684 286 596 9.05e-20 94.4
MS.gene94241.t1 AT5G63370 26.586 331 182 13 395 684 286 596 9.05e-20 94.4
MS.gene94241.t1 AT5G63370 26.586 331 182 13 395 684 286 596 9.05e-20 94.4
MS.gene94241.t1 AT5G63370 26.586 331 182 13 395 684 286 596 9.05e-20 94.4
MS.gene94241.t1 AT5G63370 26.586 331 182 13 395 684 286 596 9.05e-20 94.4
MS.gene94241.t1 AT1G76540 25.574 305 179 8 405 680 18 303 9.23e-20 91.3
MS.gene94241.t1 AT2G17530 31.176 170 95 5 526 682 256 416 9.67e-20 93.2
MS.gene94241.t1 AT2G17530 31.176 170 95 5 526 682 256 416 9.67e-20 93.2
MS.gene94241.t1 AT1G73690 28.758 306 178 12 397 682 7 292 1.09e-19 92.4
MS.gene94241.t1 AT1G10210 27.935 247 147 7 446 685 101 323 1.34e-19 91.7
MS.gene94241.t1 AT1G10210 27.935 247 147 7 446 685 101 323 1.34e-19 91.7
MS.gene94241.t1 AT1G10210 27.935 247 147 7 446 685 101 323 1.34e-19 91.7
MS.gene94241.t1 AT1G20930 24.918 305 181 7 405 680 20 305 1.67e-19 90.5
MS.gene94241.t1 AT5G63370 26.586 331 182 13 395 684 152 462 1.71e-19 92.8
MS.gene94241.t1 AT5G63370 26.586 331 182 13 395 684 152 462 1.71e-19 92.8
MS.gene94241.t1 AT4G19110 29.362 235 141 6 454 685 19 231 2.64e-19 91.3
MS.gene94241.t1 AT2G38620 31.500 200 116 6 492 687 65 247 4.61e-19 87.8
MS.gene94241.t1 AT1G09840 41.176 119 65 4 486 600 57 174 5.95e-19 88.6
MS.gene94241.t1 AT1G07880 31.401 207 107 6 405 584 37 235 7.91e-19 87.0
MS.gene94241.t1 AT3G54180 26.087 322 187 9 400 687 3 307 1.13e-18 87.8
MS.gene94241.t1 AT3G48750 27.213 305 173 11 400 678 3 284 1.49e-18 87.4
MS.gene94241.t1 AT2G38490 30.667 225 127 8 395 596 22 240 1.72e-18 89.0
MS.gene94241.t1 AT3G44850 30.769 169 105 5 522 682 318 482 2.46e-18 89.4
MS.gene94241.t1 AT1G53050 29.392 296 163 11 407 677 140 414 2.66e-18 89.7
MS.gene94241.t1 AT1G53050 29.392 296 163 11 407 677 140 414 2.66e-18 89.7
MS.gene94241.t1 AT3G05050 29.787 235 136 8 407 616 144 374 2.72e-18 89.4
MS.gene94241.t1 AT3G05050 29.787 235 136 8 407 616 144 374 2.72e-18 89.4
MS.gene94241.t1 AT3G05050 29.787 235 136 8 407 616 144 374 2.72e-18 89.4
MS.gene94241.t1 AT5G04510 28.829 222 120 7 408 597 51 266 1.30e-17 86.3
MS.gene94241.t1 AT3G53030 30.682 176 106 6 522 688 305 473 1.62e-17 86.7
MS.gene94241.t1 AT2G38620 29.018 224 122 5 400 587 3 225 2.70e-17 82.8
MS.gene94241.t1 AT2G38620 29.018 224 122 5 400 587 3 225 2.70e-17 82.8
MS.gene94241.t1 AT5G04510 28.829 222 120 7 408 597 51 266 3.13e-17 85.5
MS.gene94241.t1 AT5G44290 26.780 295 174 9 405 676 141 416 3.50e-17 86.3
MS.gene94241.t1 AT5G44290 26.780 295 174 9 405 676 141 416 3.50e-17 86.3
MS.gene94241.t1 AT5G44290 26.780 295 174 9 405 676 141 416 3.50e-17 86.3
MS.gene94241.t1 AT5G44290 26.780 295 174 9 405 676 141 416 3.50e-17 86.3
MS.gene94241.t1 AT5G44290 26.780 295 174 9 405 676 141 416 3.50e-17 86.3
MS.gene94241.t1 AT5G44290 26.780 295 174 9 405 676 141 416 4.03e-17 85.9
MS.gene94241.t1 AT5G63370 29.339 242 127 9 395 600 286 519 4.84e-17 85.5
MS.gene94241.t1 AT5G63370 29.339 242 127 9 395 600 286 519 4.84e-17 85.5
MS.gene94241.t1 AT5G44290 26.490 302 180 9 398 676 134 416 6.81e-17 84.7
MS.gene94241.t1 AT1G66750 28.146 302 179 14 400 682 12 294 7.40e-17 83.2
MS.gene94241.t1 AT5G04510 28.829 222 120 7 408 597 51 266 7.44e-17 82.4
MS.gene94241.t1 AT5G63370 29.339 242 127 9 395 600 152 385 1.05e-16 83.6
MS.gene94241.t1 AT4G22940 26.102 295 179 7 405 677 107 384 1.32e-16 84.0
MS.gene94241.t1 AT1G50240 32.243 214 123 9 401 596 6 215 1.73e-16 84.7
MS.gene94241.t1 AT1G50240 32.243 214 123 9 401 596 6 215 1.73e-16 84.7
MS.gene94241.t1 AT2G30360 27.419 310 157 12 394 681 14 277 2.01e-16 82.8
MS.gene94241.t1 AT1G74330 25.503 298 176 9 405 676 125 402 2.44e-16 83.6
MS.gene94241.t1 AT3G10540 29.091 220 122 6 408 597 52 267 2.45e-16 82.8
MS.gene94241.t1 AT1G74330 25.503 298 176 9 405 676 125 402 2.50e-16 83.6
MS.gene94241.t1 AT1G74330 25.503 298 176 9 405 676 125 402 3.52e-16 83.2
MS.gene94241.t1 AT1G18040 25.574 305 189 11 397 682 8 293 3.56e-16 81.6
MS.gene94241.t1 AT4G22940 26.102 295 179 7 405 677 107 384 3.56e-16 82.0
MS.gene94241.t1 AT3G15220 24.841 314 170 9 393 687 7 273 4.43e-16 82.8
MS.gene94241.t1 AT2G34180 24.522 314 169 10 394 686 50 316 4.48e-16 82.0
MS.gene94241.t1 AT1G53165 24.841 314 170 9 393 687 7 273 6.46e-16 82.0
MS.gene94241.t1 AT1G53165 24.841 314 170 9 393 687 7 273 6.90e-16 82.0
MS.gene94241.t1 AT1G53165 24.841 314 170 9 393 687 7 273 8.54e-16 81.6
MS.gene94241.t1 AT1G08650 27.835 194 97 5 490 681 121 273 1.16e-15 78.6
MS.gene94241.t1 AT1G12580 25.000 324 169 11 392 687 31 308 1.64e-15 80.5
MS.gene94241.t1 AT4G30960 29.167 216 131 7 394 589 17 230 1.87e-15 79.7
MS.gene94241.t1 AT5G55090 31.122 196 84 7 490 681 108 256 2.96e-15 79.3
MS.gene94241.t1 AT5G45820 28.505 214 131 7 396 589 7 218 4.87e-15 78.6
MS.gene94241.t1 AT5G55090 32.161 199 78 9 490 681 170 318 9.99e-15 77.8
MS.gene94241.t1 AT1G53570 27.541 305 151 13 405 686 218 475 1.31e-14 77.8
MS.gene94241.t1 AT1G53570 27.541 305 151 13 405 686 218 475 1.44e-14 77.4
MS.gene94241.t1 AT1G53570 27.541 305 151 13 405 686 218 475 1.46e-14 77.8
MS.gene94241.t1 AT1G53570 27.541 305 151 13 405 686 218 475 1.46e-14 77.8
MS.gene94241.t1 AT1G53570 27.541 305 151 13 405 686 218 475 1.46e-14 77.4
MS.gene94241.t1 AT1G53570 27.541 305 151 13 405 686 218 475 1.57e-14 77.4
MS.gene94241.t1 AT4G26890 34.783 138 81 4 463 600 85 213 1.84e-14 76.6
MS.gene94241.t1 AT5G39440 26.899 316 158 13 386 682 10 271 2.09e-14 76.6
MS.gene94241.t1 AT2G25090 24.675 231 143 5 394 595 8 236 2.30e-14 76.6
MS.gene94241.t1 AT2G37840 27.650 217 140 7 397 596 8 224 7.02e-14 75.9
MS.gene94241.t1 AT5G57630 29.798 198 120 6 399 579 10 205 1.32e-13 73.9
MS.gene94241.t1 AT5G57630 29.798 198 120 6 399 579 10 205 1.76e-13 73.6
MS.gene94241.t1 AT2G26980 28.636 220 133 7 398 596 11 227 2.05e-13 73.2
MS.gene94241.t1 AT1G08650 38.043 92 54 2 490 579 121 211 3.15e-13 71.2
MS.gene94241.t1 AT2G26980 28.636 220 133 7 398 596 11 227 3.62e-13 72.8
MS.gene94241.t1 AT2G26980 28.636 220 133 7 398 596 21 237 4.42e-13 72.4
MS.gene94241.t1 AT2G26980 28.636 220 133 7 398 596 11 227 8.63e-13 71.2
MS.gene94241.t1 AT2G26980 29.091 220 132 8 398 596 11 227 9.04e-13 69.7
MS.gene94241.t1 AT3G53930 29.358 218 131 9 399 596 18 232 9.07e-13 72.0
MS.gene94241.t1 AT3G53930 29.358 218 131 9 399 596 18 232 9.64e-13 72.0
MS.gene94241.t1 AT5G01820 31.193 218 127 11 399 596 20 234 1.02e-12 71.2
MS.gene94241.t1 AT1G69220 23.762 303 163 9 400 681 248 503 2.08e-12 71.2
MS.gene94241.t1 AT4G04710 36.691 139 83 4 454 589 96 232 2.41e-12 70.1
MS.gene94241.t1 AT3G04530 37.895 95 57 2 490 583 118 211 2.55e-12 68.6
MS.gene94241.t1 AT4G04710 36.691 139 83 4 454 589 110 246 2.72e-12 70.1
MS.gene94241.t1 AT1G12680 33.929 112 73 1 481 592 196 306 4.48e-12 69.3
MS.gene94241.t1 AT2G42550 37.624 101 52 3 490 581 119 217 6.40e-12 68.2
MS.gene94241.t1 AT4G04710 28.571 231 127 8 454 681 110 305 6.51e-12 68.9
MS.gene94241.t1 AT4G04710 28.571 231 127 8 454 681 110 305 6.95e-12 68.9
MS.gene94241.t1 AT4G38470 30.769 156 94 6 450 598 356 504 9.45e-12 68.6
MS.gene94241.t1 AT2G32510 27.363 201 101 6 485 682 102 260 1.43e-11 67.4
MS.gene94241.t1 AT1G48490 23.588 301 163 10 325 579 769 1048 1.97e-11 68.2
MS.gene94241.t1 AT1G14000 29.469 207 112 9 407 585 168 368 2.01e-11 67.0
MS.gene94241.t1 AT1G48490 23.588 301 163 10 325 579 768 1047 2.05e-11 68.2
MS.gene94241.t1 AT1G48490 23.588 301 163 10 325 579 768 1047 2.05e-11 68.2
MS.gene94241.t1 AT1G48490 23.588 301 163 10 325 579 768 1047 2.05e-11 68.2
MS.gene94241.t1 AT5G35410 26.829 205 129 6 398 583 8 210 2.53e-11 66.6
MS.gene94241.t1 AT3G23000 27.477 222 137 9 396 596 20 238 2.73e-11 66.6
MS.gene94241.t1 AT1G48260 27.753 227 140 7 391 596 1 224 2.81e-11 66.6
MS.gene94241.t1 AT3G61960 29.126 206 125 8 397 583 6 209 3.53e-11 67.0
MS.gene94241.t1 AT3G61960 29.126 206 125 8 397 583 6 209 3.54e-11 67.0
MS.gene94241.t1 AT2G34290 36.275 102 58 2 486 580 107 208 3.97e-11 64.7
MS.gene94241.t1 AT2G05060 35.000 100 58 2 486 580 122 219 4.62e-11 65.1
MS.gene94241.t1 AT2G41930 37.383 107 49 5 490 580 115 219 6.31e-11 65.1
MS.gene94241.t1 AT1G18350 29.730 222 119 10 389 584 33 243 9.18e-11 63.9

Find 119 sgRNAs with CRISPR-Local

Find 198 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTAATTTCCTTCAAATTA+AGG 0.240015 5.4:+65389264 None:intergenic
TTTGAAGAAATTCAGTTAGA+TGG 0.268348 5.4:-65389488 MS.gene94241:CDS
ATGCTTCACCACCAGATTCT+TGG 0.279095 5.4:+65388323 None:intergenic
TGCTCCAATGATGTCTCTTC+TGG 0.286338 5.4:+65387210 None:intergenic
TTTGATGGACCTGATTTCTT+TGG 0.291801 5.4:-65389590 MS.gene94241:CDS
CAGAAATTCAACCAAGAATC+TGG 0.301956 5.4:-65388334 MS.gene94241:CDS
AGAAGAAACAGAGTTTGATT+TGG 0.306764 5.4:+65390427 None:intergenic
TCTTGCAGTAGGCCTTCTTT+TGG 0.316790 5.4:+65387125 None:intergenic
AAATCAAACTCTGTTTCTTC+TGG 0.317003 5.4:-65390425 MS.gene94241:CDS
ATGGTCGCTCGGCTGTATTT+TGG 0.344765 5.4:-65387901 MS.gene94241:CDS
CCTTCTCGTGTTTCTTCTAC+AGG 0.345339 5.4:-65390368 MS.gene94241:intron
GCTCATTACTCGACAGTGTT+TGG 0.357897 5.4:-65388138 MS.gene94241:CDS
AATCGCGTGCTGTGCCGAAT+TGG 0.358187 5.4:+65389690 None:intergenic
TGCAAAAGCAGTCCAGGTTC+AGG 0.360410 5.4:-65389323 MS.gene94241:CDS
ATCATCACGACTGCATCATT+TGG 0.362539 5.4:+65387712 None:intergenic
TGCCTTTGTAATCATTCATC+TGG 0.378440 5.4:-65389431 MS.gene94241:CDS
GAAATAAAGATTATTGATCT+TGG 0.381733 5.4:-65388029 MS.gene94241:CDS
AACTTCGATGGTTAAGTCAT+AGG 0.383815 5.4:+65389148 None:intergenic
CTTTAGCTACCTTAATTTGA+AGG 0.398512 5.4:-65389273 MS.gene94241:CDS
GCAATCTGAACTATGCTTCA+TGG 0.399375 5.4:+65389181 None:intergenic
GCACGCATGATTGGAATGTT+TGG 0.399540 5.4:-65387685 MS.gene94241:CDS
CTTTGACATCCAAAGAAATC+AGG 0.400789 5.4:+65389581 None:intergenic
CGATTCCCATCTGAAGATCA+TGG 0.404276 5.4:+65388551 None:intergenic
TAAGAAGCTTAATTTCATCT+AGG 0.405483 5.4:+65388479 None:intergenic
ATGATTCTTGCACGCATGAT+TGG 0.406286 5.4:-65387694 MS.gene94241:CDS
ATTGCAATATTTACATAACT+TGG 0.409904 5.4:-65388111 MS.gene94241:CDS
GATGAGGAATTAATTCCATA+TGG 0.411809 5.4:+65389755 None:intergenic
CCATAGCTTTCGATCCCATT+TGG 0.420647 5.4:+65389110 None:intergenic
GAGTGAAGAACTCCATGTTC+CGG 0.421411 5.4:-65389066 MS.gene94241:CDS
GCAGAATTTATCAATCCATA+TGG 0.423297 5.4:-65389770 MS.gene94241:intron
TGAAGGCCTAACATCACTTC+AGG 0.423350 5.4:+65387945 None:intergenic
ATCGCGTGCTGTGCCGAATT+GGG 0.427121 5.4:+65389691 None:intergenic
ATGATGAAAAGATTGATATA+TGG 0.430762 5.4:-65387920 MS.gene94241:CDS
TTAAGGTAGCTAAAGTTCAT+AGG 0.436586 5.4:+65389281 None:intergenic
CGGAGTTTGACCGGAGGAGG+TGG 0.439905 5.4:+65390497 None:intergenic
TCTGATAGATTGTCCCAATT+CGG 0.444063 5.4:-65389704 MS.gene94241:CDS
AAATCAGGTCCATCAAAATC+AGG 0.444409 5.4:+65389596 None:intergenic
GTTGAAACAGATCTACCAAA+TGG 0.447645 5.4:-65389125 MS.gene94241:CDS
ATGACCGAGTTGAGCACAAT+TGG 0.453092 5.4:+65388637 None:intergenic
TCGGTTCAGCTGCATTCAGT+AGG 0.474081 5.4:-65388585 MS.gene94241:CDS
CGGCCGTCGGAGTTGACTTC+CGG 0.476999 5.4:-65390464 MS.gene94241:CDS
GTGCTCAACTCGGTCATGGC+TGG 0.478108 5.4:-65388631 MS.gene94241:CDS
AATGGTTCCTCCACCTCCTC+CGG 0.480931 5.4:-65390507 MS.gene94241:CDS
CTACAAGAACCTCCTGAACC+TGG 0.483158 5.4:+65389311 None:intergenic
TAAGTTTGCACGCAGAAGTT+CGG 0.485105 5.4:+65388366 None:intergenic
AAGAAGGCCTACTGCAAGAC+AGG 0.488234 5.4:-65387121 MS.gene94241:CDS
ACCAACATCTCCATATCAAA+AGG 0.493340 5.4:+65387661 None:intergenic
TTTGGAGAATTGACCGTCGC+CGG 0.495527 5.4:+65390445 None:intergenic
CTGCGGTAACCTCCGGAACA+TGG 0.499317 5.4:+65389054 None:intergenic
ATATGCAACATGAACCGTAT+TGG 0.500380 5.4:-65389655 MS.gene94241:CDS
GTAAATGAGCGGAGTTTGAC+CGG 0.504559 5.4:+65390488 None:intergenic
TTTAGTGCCTGTCTTGCAGT+AGG 0.505137 5.4:+65387114 None:intergenic
TTGCAATATTTACATAACTT+GGG 0.506178 5.4:-65388110 MS.gene94241:CDS
ACTTCGATGGTTAAGTCATA+GGG 0.506736 5.4:+65389149 None:intergenic
TGACATTTACTTCATAAATG+AGG 0.507620 5.4:-65387599 MS.gene94241:intron
CTTCAGGAGCTCTATAAGAC+CGG 0.509504 5.4:+65387961 None:intergenic
AATTCAGTTAGATGGAAATG+AGG 0.512494 5.4:-65389480 MS.gene94241:CDS
ATTCGAAAGATTATTGTCAC+GGG 0.513570 5.4:-65389388 MS.gene94241:CDS
TCTTCATCTGCGGTAACCTC+CGG 0.514876 5.4:+65389047 None:intergenic
AATTCCAGAAGAGACATCAT+TGG 0.515774 5.4:-65387214 MS.gene94241:CDS
GAGCGGAGTTTGACCGGAGG+AGG 0.517713 5.4:+65390494 None:intergenic
ATCATTGGAGCACCACCTAC+AGG 0.520076 5.4:-65387199 MS.gene94241:CDS
GGAGATGTTGGTGAAAGGGC+AGG 0.522737 5.4:-65387650 MS.gene94241:CDS
GGAGAACAGTTTGTTAGCAT+CGG 0.522830 5.4:-65390404 MS.gene94241:CDS
AGTTTGACCGGAGGAGGTGG+AGG 0.526122 5.4:+65390500 None:intergenic
GGAGGAGGTGGAGGAACCAT+TGG 0.526709 5.4:+65390509 None:intergenic
ATCTGTTTCAACAACTTCGA+TGG 0.530198 5.4:+65389136 None:intergenic
CGGTTCAGCTGCATTCAGTA+GGG 0.531413 5.4:-65388584 MS.gene94241:CDS
TATTCGAAAGATTATTGTCA+CGG 0.532174 5.4:-65389389 MS.gene94241:CDS
CATTACTCGACAGTGTTTGG+AGG 0.533015 5.4:-65388135 MS.gene94241:CDS
ATTCAGTTAGATGGAAATGA+GGG 0.535418 5.4:-65389479 MS.gene94241:CDS
TTGAAACAGATCTACCAAAT+GGG 0.536829 5.4:-65389124 MS.gene94241:CDS
AGAGCTCCTGAAGTGATGTT+AGG 0.539217 5.4:-65387951 MS.gene94241:CDS
AATTGTGCTCAACTCGGTCA+TGG 0.539716 5.4:-65388635 MS.gene94241:CDS
ATATGGAGATGTTGGTGAAA+GGG 0.549392 5.4:-65387654 MS.gene94241:CDS
CTTCACACGAGAATGTTACA+TGG 0.556068 5.4:+65387062 None:intergenic
GTTACATGGACTTGTATACA+TGG 0.557027 5.4:+65387076 None:intergenic
TCAAGCCCATGATCTTCAGA+TGG 0.559687 5.4:-65388557 MS.gene94241:CDS
AAAGAATTTCTCGTAGTCAA+AGG 0.560157 5.4:+65390535 None:intergenic
TTAACGTCAACCCCAAAAGA+AGG 0.560479 5.4:-65387137 MS.gene94241:CDS
GAATTGTACATAGAAAGAAC+AGG 0.562317 5.4:-65388956 MS.gene94241:intron
TGTGTCTATATGTACAATCC+CGG 0.562438 5.4:-65387980 MS.gene94241:CDS
CTTTGTAATCATTCATCTGG+AGG 0.567267 5.4:-65389428 MS.gene94241:CDS
CCAAATGGGATCGAAAGCTA+TGG 0.568109 5.4:-65389110 MS.gene94241:CDS
AAGATTGATATATGGTCGCT+CGG 0.568240 5.4:-65387912 MS.gene94241:CDS
GGAGTTCTTCACTCAAATCT+CGG 0.573138 5.4:+65389075 None:intergenic
TCGGAGTTGACTTCCGGCGA+CGG 0.574134 5.4:-65390458 MS.gene94241:CDS
ACATAGTATCAGTGACCTGT+AGG 0.577899 5.4:+65387184 None:intergenic
CAAATTAGGACGTACTTCAC+CGG 0.578259 5.4:+65387866 None:intergenic
GGAGGTTACCGCAGATGAAG+AGG 0.583306 5.4:-65389045 MS.gene94241:CDS
TCAAACTCCGCTCATTTACA+CGG 0.591605 5.4:-65390484 MS.gene94241:CDS
CTATGCTTCATGGTAAGCAC+AGG 0.592149 5.4:+65389191 None:intergenic
TTCAGGAGGTTCTTGTAGCG+AGG 0.596058 5.4:-65389306 MS.gene94241:CDS
GATTCCCATCTGAAGATCAT+GGG 0.599777 5.4:+65388552 None:intergenic
GATATGGAGATGTTGGTGAA+AGG 0.602767 5.4:-65387655 MS.gene94241:CDS
CAAGCCCATGATCTTCAGAT+GGG 0.602925 5.4:-65388556 MS.gene94241:CDS
GGGTTACATAGATAAGTCAA+TGG 0.603025 5.4:-65389459 MS.gene94241:CDS
TTCAGGAGCTCTATAAGACC+GGG 0.603488 5.4:+65387962 None:intergenic
TTGTATACATGGGAAAGCCA+TGG 0.610680 5.4:+65387087 None:intergenic
GCATAGTTCAGATTGCTACA+AGG 0.615746 5.4:-65389174 MS.gene94241:CDS
TACTATGTGACAGAATATCT+CGG 0.618368 5.4:-65388604 MS.gene94241:CDS
TCAACTCGGTCATGGCTGGA+AGG 0.619414 5.4:-65388627 MS.gene94241:CDS
GACTGGATTTGAAGAAAACA+AGG 0.619878 5.4:-65388665 MS.gene94241:CDS
GACAGGCACTAAAACATCCA+TGG 0.620201 5.4:-65387104 MS.gene94241:CDS
ATCATTCTGAGTCTGAGATG+AGG 0.620260 5.4:+65389739 None:intergenic
ATTATTATCCTCTTCATCTG+CGG 0.620969 5.4:+65389037 None:intergenic
AAAAGCAGTCCAGGTTCAGG+AGG 0.632418 5.4:-65389320 MS.gene94241:CDS
AGTGCCAATTGTGCTCAACT+CGG 0.634453 5.4:-65388641 MS.gene94241:CDS
CCTGTAGAAGAAACACGAGA+AGG 0.643032 5.4:+65390368 None:intergenic
TCGCCGGAAGTCAACTCCGA+CGG 0.644520 5.4:+65390461 None:intergenic
CTCCAGATGAATGATTACAA+AGG 0.655100 5.4:+65389429 None:intergenic
CCGCTCATTTACACGGCCGT+CGG 0.662462 5.4:-65390477 MS.gene94241:CDS
TGAAGAACTCCATGTTCCGG+AGG 0.665401 5.4:-65389063 MS.gene94241:CDS
TTACATGGACTTGTATACAT+GGG 0.672153 5.4:+65387077 None:intergenic
TAGTATCAGTGACCTGTAGG+TGG 0.677524 5.4:+65387187 None:intergenic
AAATTCAACCAAGAATCTGG+TGG 0.683493 5.4:-65388331 MS.gene94241:CDS
TTCGAAAGATTATTGTCACG+GGG 0.698337 5.4:-65389387 MS.gene94241:CDS
CCGACGGCCGTGTAAATGAG+CGG 0.707377 5.4:+65390477 None:intergenic
AATGAGCGGAGTTTGACCGG+AGG 0.740584 5.4:+65390491 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAAAAAATAAATAAATCT+AGG + chr5.4:65387938-65387957 None:intergenic 10.0%
!!! ATAGATTTTTTTTTTTTTGT+CGG - chr5.4:65389514-65389533 MS.gene94241:CDS 10.0%
!! AAAATACACAAATTCAAATT+TGG + chr5.4:65387662-65387681 None:intergenic 15.0%
!! AATTTGTAATGCATAAAAAT+AGG - chr5.4:65387901-65387920 MS.gene94241:CDS 15.0%
!! ATTTGTAATGCATAAAAATA+GGG - chr5.4:65387902-65387921 MS.gene94241:CDS 15.0%
!!! AGATCATATATAAGATATTT+TGG + chr5.4:65387776-65387795 None:intergenic 15.0%
!!! TAACATATACTTTTCTTTTT+TGG + chr5.4:65390362-65390381 None:intergenic 15.0%
!!! TAATGAAATACATTTTTCTA+TGG - chr5.4:65389902-65389921 MS.gene94241:intron 15.0%
!! AAAAATGTAATTTGAATGGA+TGG + chr5.4:65390443-65390462 None:intergenic 20.0%
!! AGCTTAATATAATCCAAATT+TGG + chr5.4:65387833-65387852 None:intergenic 20.0%
!! ATGATGAAAAGATTGATATA+TGG - chr5.4:65389810-65389829 MS.gene94241:intron 20.0%
!! ATTGCAATATTTACATAACT+TGG - chr5.4:65389619-65389638 MS.gene94241:CDS 20.0%
!! CAAACGAAATATGTTAAAAA+AGG + chr5.4:65390177-65390196 None:intergenic 20.0%
!! GAAATAAAGATTATTGATCT+TGG - chr5.4:65389701-65389720 MS.gene94241:CDS 20.0%
!! GAAGATTATTAAAAATGACA+AGG - chr5.4:65389212-65389231 MS.gene94241:CDS 20.0%
!! TATCATAAGAAATGCAAATT+AGG + chr5.4:65389881-65389900 None:intergenic 20.0%
!! TGAATTTATGTTTCCAAATT+TGG - chr5.4:65387817-65387836 MS.gene94241:intron 20.0%
!! TTGCAATATTTACATAACTT+GGG - chr5.4:65389620-65389639 MS.gene94241:CDS 20.0%
!!! TAAATTGATTTTGAATGTGT+AGG - chr5.4:65388865-65388884 MS.gene94241:intron 20.0%
!!! TACATTATTAAAGATTGGTT+GGG + chr5.4:65390468-65390487 None:intergenic 20.0%
!!! TGATTTTTCTGATAAATCTA+AGG + chr5.4:65390418-65390437 None:intergenic 20.0%
!!! TTCGAATTTCTAAGAAAAAA+TGG - chr5.4:65387107-65387126 MS.gene94241:CDS 20.0%
! ATAATGTTAGGTCAAAATCA+TGG + chr5.4:65388984-65389003 None:intergenic 25.0%
! CAATCTTTAATAATGTACAC+AGG - chr5.4:65390471-65390490 MS.gene94241:CDS 25.0%
! CTGTGTACATTATTAAAGAT+TGG + chr5.4:65390473-65390492 None:intergenic 25.0%
! GAGAAAAAGTGAATAATGTT+AGG + chr5.4:65388996-65389015 None:intergenic 25.0%
! GCTTAATTTCCTTCAAATTA+AGG + chr5.4:65388469-65388488 None:intergenic 25.0%
! GGGAAAAAATGTAATTTGAA+TGG + chr5.4:65390447-65390466 None:intergenic 25.0%
! GTACATTATTAAAGATTGGT+TGG + chr5.4:65390469-65390488 None:intergenic 25.0%
! TAAGAAGCTTAATTTCATCT+AGG + chr5.4:65389254-65389273 None:intergenic 25.0%
! TATTCGAAAGATTATTGTCA+CGG - chr5.4:65388341-65388360 MS.gene94241:CDS 25.0%
! TGACATTTACTTCATAAATG+AGG - chr5.4:65390131-65390150 MS.gene94241:intron 25.0%
! TTAAAAAAGGAACAGCTAAA+AGG + chr5.4:65390164-65390183 None:intergenic 25.0%
! TTTGAAGAAATTCAGTTAGA+TGG - chr5.4:65388242-65388261 MS.gene94241:intron 25.0%
!! ACATTATTAAAGATTGGTTG+GGG + chr5.4:65390467-65390486 None:intergenic 25.0%
!! AGAAAAGTATATGTTAGTGT+TGG - chr5.4:65390366-65390385 MS.gene94241:intron 25.0%
!! CAATCTTTTCATCATATTGA+AGG + chr5.4:65389805-65389824 None:intergenic 25.0%
!! TCGTTTTCATTATACCAATA+CGG + chr5.4:65388092-65388111 None:intergenic 25.0%
!! TCTGAATGATTTTCATATGA+AGG - chr5.4:65388493-65388512 MS.gene94241:CDS 25.0%
!! TTTTACATTAAAGAGATTGC+AGG - chr5.4:65389431-65389450 MS.gene94241:CDS 25.0%
!!! AACGAGTAAAAAGTTTTTTC+AGG + chr5.4:65390270-65390289 None:intergenic 25.0%
!!! AGAATCATCTTGTTGATTTT+CGG + chr5.4:65388204-65388223 None:intergenic 25.0%
!!! CATCTTGAATGTATTTTAAG+AGG + chr5.4:65388730-65388749 None:intergenic 25.0%
!!! GTTGATTCTAAGTTCTTTTT+TGG - chr5.4:65389980-65389999 MS.gene94241:intron 25.0%
!!! TGAAAAAAGTATTTCAACCT+AGG + chr5.4:65390215-65390234 None:intergenic 25.0%
!!! TGTTTTTATTCATCAATCCT+AGG - chr5.4:65390195-65390214 MS.gene94241:intron 25.0%
AAAGAATTTCTCGTAGTCAA+AGG + chr5.4:65387198-65387217 None:intergenic 30.0%
AATTCAGTTAGATGGAAATG+AGG - chr5.4:65388250-65388269 MS.gene94241:intron 30.0%
AGAAGAAACAGAGTTTGATT+TGG + chr5.4:65387306-65387325 None:intergenic 30.0%
ATTATTATCCTCTTCATCTG+CGG + chr5.4:65388696-65388715 None:intergenic 30.0%
ATTCAGTTAGATGGAAATGA+GGG - chr5.4:65388251-65388270 MS.gene94241:intron 30.0%
ATTCGAAAGATTATTGTCAC+GGG - chr5.4:65388342-65388361 MS.gene94241:CDS 30.0%
CAATGAATAAATGTTCCTGA+TGG + chr5.4:65389341-65389360 None:intergenic 30.0%
CTTAATATTCTCGATAATGC+TGG - chr5.4:65388838-65388857 MS.gene94241:intron 30.0%
GAATTGTACATAGAAAGAAC+AGG - chr5.4:65388774-65388793 MS.gene94241:intron 30.0%
GATGAGGAATTAATTCCATA+TGG + chr5.4:65387978-65387997 None:intergenic 30.0%
GCAGAATTTATCAATCCATA+TGG - chr5.4:65387960-65387979 MS.gene94241:CDS 30.0%
GTCTCGTGAATGAAAAAAAT+AGG - chr5.4:65390310-65390329 MS.gene94241:intron 30.0%
GTTTCTGCAATTTCTACATT+TGG - chr5.4:65387619-65387638 MS.gene94241:CDS 30.0%
TACTATGTGACAGAATATCT+CGG - chr5.4:65389126-65389145 MS.gene94241:CDS 30.0%
TTAAGGTAGCTAAAGTTCAT+AGG + chr5.4:65388452-65388471 None:intergenic 30.0%
TTACATGGACTTGTATACAT+GGG + chr5.4:65390656-65390675 None:intergenic 30.0%
TTGAAACAGATCTACCAAAT+GGG - chr5.4:65388606-65388625 MS.gene94241:CDS 30.0%
! AAATCAAACTCTGTTTCTTC+TGG - chr5.4:65387305-65387324 MS.gene94241:intron 30.0%
! AATGTTTGGTCCTTTTGATA+TGG - chr5.4:65390059-65390078 MS.gene94241:intron 30.0%
! CTTTAGCTACCTTAATTTGA+AGG - chr5.4:65388457-65388476 MS.gene94241:intron 30.0%
! TCAATTGCATGTTGTGTTTT+AGG - chr5.4:65387695-65387714 MS.gene94241:CDS 30.0%
!! GTATTTTAAGAGGTCATCAT+CGG + chr5.4:65388720-65388739 None:intergenic 30.0%
!! TTATGACTATTTCTACCATC+AGG - chr5.4:65389323-65389342 MS.gene94241:CDS 30.0%
!!! CGAGAAATTCTTTTTTCCAA+TGG - chr5.4:65387205-65387224 MS.gene94241:CDS 30.0%
AAATCAGGTCCATCAAAATC+AGG + chr5.4:65388137-65388156 None:intergenic 35.0%
AAATTCAACCAAGAATCTGG+TGG - chr5.4:65389399-65389418 MS.gene94241:CDS 35.0%
AACTTCGATGGTTAAGTCAT+AGG + chr5.4:65388585-65388604 None:intergenic 35.0%
AAGATTGATATATGGTCGCT+CGG - chr5.4:65389818-65389837 MS.gene94241:intron 35.0%
AATATTCTCGATAATGCTGG+TGG - chr5.4:65388841-65388860 MS.gene94241:intron 35.0%
AATTCCAGAAGAGACATCAT+TGG - chr5.4:65390516-65390535 MS.gene94241:CDS 35.0%
ACCAACATCTCCATATCAAA+AGG + chr5.4:65390072-65390091 None:intergenic 35.0%
ACTTCGATGGTTAAGTCATA+GGG + chr5.4:65388584-65388603 None:intergenic 35.0%
ATATGCAACATGAACCGTAT+TGG - chr5.4:65388075-65388094 MS.gene94241:CDS 35.0%
ATCTGTTTCAACAACTTCGA+TGG + chr5.4:65388597-65388616 None:intergenic 35.0%
CAAATTGATAAGCAATGACG+TGG + chr5.4:65389493-65389512 None:intergenic 35.0%
CAGAAATTCAACCAAGAATC+TGG - chr5.4:65389396-65389415 MS.gene94241:CDS 35.0%
CCATCTATTGTTGAATCTAC+AGG - chr5.4:65389043-65389062 MS.gene94241:CDS 35.0%
CCTGTAGATTCAACAATAGA+TGG + chr5.4:65389046-65389065 None:intergenic 35.0%
CGGAAATAGAGAAATTGTGA+AGG - chr5.4:65389534-65389553 MS.gene94241:CDS 35.0%
CTATGGCTCTTACAAAAACA+TGG - chr5.4:65389919-65389938 MS.gene94241:intron 35.0%
CTCCAGATGAATGATTACAA+AGG + chr5.4:65388304-65388323 None:intergenic 35.0%
CTTTGACATCCAAAGAAATC+AGG + chr5.4:65388152-65388171 None:intergenic 35.0%
CTTTGTAATCATTCATCTGG+AGG - chr5.4:65388302-65388321 MS.gene94241:CDS 35.0%
GACTGGATTTGAAGAAAACA+AGG - chr5.4:65389065-65389084 MS.gene94241:CDS 35.0%
GGGTTACATAGATAAGTCAA+TGG - chr5.4:65388271-65388290 MS.gene94241:intron 35.0%
GTTGAAACAGATCTACCAAA+TGG - chr5.4:65388605-65388624 MS.gene94241:CDS 35.0%
TATTGTTGAATCTACAGGAC+TGG - chr5.4:65389048-65389067 MS.gene94241:CDS 35.0%
TCTGATAGATTGTCCCAATT+CGG - chr5.4:65388026-65388045 MS.gene94241:CDS 35.0%
TGCCTTTGTAATCATTCATC+TGG - chr5.4:65388299-65388318 MS.gene94241:intron 35.0%
TGTGTCTATATGTACAATCC+CGG - chr5.4:65389750-65389769 MS.gene94241:CDS 35.0%
TTCGAAAGATTATTGTCACG+GGG - chr5.4:65388343-65388362 MS.gene94241:CDS 35.0%
! ATATGGAGATGTTGGTGAAA+GGG - chr5.4:65390076-65390095 MS.gene94241:intron 35.0%
! CTTTTGATCAGAACGTTTTC+AGG + chr5.4:65389668-65389687 None:intergenic 35.0%
! TCCTTTTGATATGGAGATGT+TGG - chr5.4:65390068-65390087 MS.gene94241:intron 35.0%
! TTCATGACTCCTGATTTTGA+TGG - chr5.4:65388125-65388144 MS.gene94241:CDS 35.0%
! TTTGATGGACCTGATTTCTT+TGG - chr5.4:65388140-65388159 MS.gene94241:CDS 35.0%
ACATAGTATCAGTGACCTGT+AGG + chr5.4:65390549-65390568 None:intergenic 40.0%
ACTTGTCAATAAGCATGACC+CGG - chr5.4:65389275-65389294 MS.gene94241:CDS 40.0%
AGTATGTGGTGTTTATCTCC+CGG + chr5.4:65389297-65389316 None:intergenic 40.0%
AGTCATAAAGACGCAGTATG+TGG + chr5.4:65389311-65389330 None:intergenic 40.0%
ATCATCACGACTGCATCATT+TGG + chr5.4:65390021-65390040 None:intergenic 40.0%
ATGATTCTTGCACGCATGAT+TGG - chr5.4:65390036-65390055 MS.gene94241:intron 40.0%
CAAATTAGGACGTACTTCAC+CGG + chr5.4:65389867-65389886 None:intergenic 40.0%
GATAAGCAATGACGTGGAAT+AGG + chr5.4:65389487-65389506 None:intergenic 40.0%
GATTCCCATCTGAAGATCAT+GGG + chr5.4:65389181-65389200 None:intergenic 40.0%
GCAATCTGAACTATGCTTCA+TGG + chr5.4:65388552-65388571 None:intergenic 40.0%
GCATAGTTCAGATTGCTACA+AGG - chr5.4:65388556-65388575 MS.gene94241:CDS 40.0%
GGAGTTCTTCACTCAAATCT+CGG + chr5.4:65388658-65388677 None:intergenic 40.0%
TAAGTTTGCACGCAGAAGTT+CGG + chr5.4:65389367-65389386 None:intergenic 40.0%
TCAAACTCCGCTCATTTACA+CGG - chr5.4:65387246-65387265 MS.gene94241:intron 40.0%
TTAACGTCAACCCCAAAAGA+AGG - chr5.4:65390593-65390612 MS.gene94241:CDS 40.0%
TTGTATACATGGGAAAGCCA+TGG + chr5.4:65390646-65390665 None:intergenic 40.0%
! ATCATTCTGAGTCTGAGATG+AGG + chr5.4:65387994-65388013 None:intergenic 40.0%
! ATGTGTAGGAGACTAGTTGT+TGG - chr5.4:65388879-65388898 MS.gene94241:intron 40.0%
! GATATGGAGATGTTGGTGAA+AGG - chr5.4:65390075-65390094 MS.gene94241:intron 40.0%
!! GGAGAACAGTTTGTTAGCAT+CGG - chr5.4:65387326-65387345 MS.gene94241:intron 40.0%
!!! CTAAGTTCTTTTTTGGCTCC+AGG - chr5.4:65389987-65390006 MS.gene94241:intron 40.0%
AATTGTGCTCAACTCGGTCA+TGG - chr5.4:65389095-65389114 MS.gene94241:CDS 45.0%
AGAGCTCCTGAAGTGATGTT+AGG - chr5.4:65389779-65389798 MS.gene94241:intron 45.0%
AGGCATAATCCAACTCAACC+CGG + chr5.4:65390250-65390269 None:intergenic 45.0%
AGTGCCAATTGTGCTCAACT+CGG - chr5.4:65389089-65389108 MS.gene94241:CDS 45.0%
ATGCTTCACCACCAGATTCT+TGG + chr5.4:65389410-65389429 None:intergenic 45.0%
CAAGCCCATGATCTTCAGAT+GGG - chr5.4:65389174-65389193 MS.gene94241:CDS 45.0%
CATTACTCGACAGTGTTTGG+AGG - chr5.4:65389595-65389614 MS.gene94241:CDS 45.0%
CCAAATGGGATCGAAAGCTA+TGG - chr5.4:65388620-65388639 MS.gene94241:CDS 45.0%
CCATAGCTTTCGATCCCATT+TGG + chr5.4:65388623-65388642 None:intergenic 45.0%
CCTGTAGAAGAAACACGAGA+AGG + chr5.4:65387365-65387384 None:intergenic 45.0%
CCTTCTCGTGTTTCTTCTAC+AGG - chr5.4:65387362-65387381 MS.gene94241:intron 45.0%
CGAGTAATGAGCTGCAAAGA+AGG + chr5.4:65389584-65389603 None:intergenic 45.0%
CGATTCCCATCTGAAGATCA+TGG + chr5.4:65389182-65389201 None:intergenic 45.0%
CTATGCTTCATGGTAAGCAC+AGG + chr5.4:65388542-65388561 None:intergenic 45.0%
CTTCAGGAGCTCTATAAGAC+CGG + chr5.4:65389772-65389791 None:intergenic 45.0%
CTTGTCAATAAGCATGACCC+GGG - chr5.4:65389276-65389295 MS.gene94241:CDS 45.0%
GACAGGCACTAAAACATCCA+TGG - chr5.4:65390626-65390645 MS.gene94241:CDS 45.0%
GAGTGAAGAACTCCATGTTC+CGG - chr5.4:65388664-65388683 MS.gene94241:CDS 45.0%
GCACGCATGATTGGAATGTT+TGG - chr5.4:65390045-65390064 MS.gene94241:intron 45.0%
GCTCATTACTCGACAGTGTT+TGG - chr5.4:65389592-65389611 MS.gene94241:CDS 45.0%
GTAAATGAGCGGAGTTTGAC+CGG + chr5.4:65387245-65387264 None:intergenic 45.0%
GTATGTGGTGTTTATCTCCC+GGG + chr5.4:65389296-65389315 None:intergenic 45.0%
TAGTATCAGTGACCTGTAGG+TGG + chr5.4:65390546-65390565 None:intergenic 45.0%
TCAAGCCCATGATCTTCAGA+TGG - chr5.4:65389173-65389192 MS.gene94241:CDS 45.0%
TGAAGGCCTAACATCACTTC+AGG + chr5.4:65389788-65389807 None:intergenic 45.0%
TGCTCCAATGATGTCTCTTC+TGG + chr5.4:65390523-65390542 None:intergenic 45.0%
TTCAGGAGCTCTATAAGACC+GGG + chr5.4:65389771-65389790 None:intergenic 45.0%
TTTAGTGCCTGTCTTGCAGT+AGG + chr5.4:65390619-65390638 None:intergenic 45.0%
! ATGACCGAGTTGAGCACAAT+TGG + chr5.4:65389096-65389115 None:intergenic 45.0%
! CCATTTTGCAAAAGCAGTCC+AGG - chr5.4:65388401-65388420 MS.gene94241:intron 45.0%
! CTTGCAGTAGGCCTTCTTTT+GGG + chr5.4:65390607-65390626 None:intergenic 45.0%
! TCTTGCAGTAGGCCTTCTTT+TGG + chr5.4:65390608-65390627 None:intergenic 45.0%
! TTGCAGTAGGCCTTCTTTTG+GGG + chr5.4:65390606-65390625 None:intergenic 45.0%
! TTTTTCATGTTGCTGCCACC+CGG - chr5.4:65390228-65390247 MS.gene94241:intron 45.0%
!! CATCATTTGGAAAGAGCACC+TGG + chr5.4:65390008-65390027 None:intergenic 45.0%
!! CCTGGACTGCTTTTGCAAAA+TGG + chr5.4:65388404-65388423 None:intergenic 45.0%
!! TCAGAACGTTTTCAGGCTTC+AGG + chr5.4:65389661-65389680 None:intergenic 45.0%
!!! ATTTTGGCTGAGCTATGCTC+CGG - chr5.4:65389845-65389864 MS.gene94241:intron 45.0%
AAAAGCAGTCCAGGTTCAGG+AGG - chr5.4:65388410-65388429 MS.gene94241:intron 50.0%
AAGAAGGCCTACTGCAAGAC+AGG - chr5.4:65390609-65390628 MS.gene94241:CDS 50.0%
ATAATCCAACTCAACCCGGG+TGG + chr5.4:65390246-65390265 None:intergenic 50.0%
ATAGGCCACTCCACTCAACT+CGG - chr5.4:65390328-65390347 MS.gene94241:intron 50.0%
CGGTTCAGCTGCATTCAGTA+GGG - chr5.4:65389146-65389165 MS.gene94241:CDS 50.0%
CTACAAGAACCTCCTGAACC+TGG + chr5.4:65388422-65388441 None:intergenic 50.0%
GGCATAATCCAACTCAACCC+GGG + chr5.4:65390249-65390268 None:intergenic 50.0%
TCGGTTCAGCTGCATTCAGT+AGG - chr5.4:65389145-65389164 MS.gene94241:CDS 50.0%
TCTTCATCTGCGGTAACCTC+CGG + chr5.4:65388686-65388705 None:intergenic 50.0%
TGAAGAACTCCATGTTCCGG+AGG - chr5.4:65388667-65388686 MS.gene94241:CDS 50.0%
TGCAAAAGCAGTCCAGGTTC+AGG - chr5.4:65388407-65388426 MS.gene94241:intron 50.0%
TTCAGGAGGTTCTTGTAGCG+AGG - chr5.4:65388424-65388443 MS.gene94241:intron 50.0%
TTTGGAGAATTGACCGTCGC+CGG + chr5.4:65387288-65387307 None:intergenic 50.0%
! AGAATCCGAGTTGAGTGGAG+TGG + chr5.4:65390336-65390355 None:intergenic 50.0%
! ATCATTGGAGCACCACCTAC+AGG - chr5.4:65390531-65390550 MS.gene94241:CDS 50.0%
! ATGGTCGCTCGGCTGTATTT+TGG - chr5.4:65389829-65389848 MS.gene94241:intron 50.0%
! GGTCTAGAATCCGAGTTGAG+TGG + chr5.4:65390341-65390360 None:intergenic 50.0%
! TTTTCATGTTGCTGCCACCC+GGG - chr5.4:65390229-65390248 MS.gene94241:intron 50.0%
AATCGCGTGCTGTGCCGAAT+TGG + chr5.4:65388043-65388062 None:intergenic 55.0%
AATGAGCGGAGTTTGACCGG+AGG + chr5.4:65387242-65387261 None:intergenic 55.0%
AATGGTTCCTCCACCTCCTC+CGG - chr5.4:65387223-65387242 MS.gene94241:CDS 55.0%
ATCGCGTGCTGTGCCGAATT+GGG + chr5.4:65388042-65388061 None:intergenic 55.0%
GGAGGTTACCGCAGATGAAG+AGG - chr5.4:65388685-65388704 MS.gene94241:intron 55.0%
TCAACTCGGTCATGGCTGGA+AGG - chr5.4:65389103-65389122 MS.gene94241:CDS 55.0%
! GGAGATGTTGGTGAAAGGGC+AGG - chr5.4:65390080-65390099 MS.gene94241:intron 55.0%
AGTTTGACCGGAGGAGGTGG+AGG + chr5.4:65387233-65387252 None:intergenic 60.0%
CCGACGGCCGTGTAAATGAG+CGG + chr5.4:65387256-65387275 None:intergenic 60.0%
CCGCTCATTTACACGGCCGT+CGG - chr5.4:65387253-65387272 MS.gene94241:intron 60.0%
CTGCGGTAACCTCCGGAACA+TGG + chr5.4:65388679-65388698 None:intergenic 60.0%
GGAGGAGGTGGAGGAACCAT+TGG + chr5.4:65387224-65387243 None:intergenic 60.0%
GTGCTCAACTCGGTCATGGC+TGG - chr5.4:65389099-65389118 MS.gene94241:CDS 60.0%
TCGCCGGAAGTCAACTCCGA+CGG + chr5.4:65387272-65387291 None:intergenic 60.0%
! TCGGAGTTGACTTCCGGCGA+CGG - chr5.4:65387272-65387291 MS.gene94241:intron 60.0%
CGGAGTTTGACCGGAGGAGG+TGG + chr5.4:65387236-65387255 None:intergenic 65.0%
GAGCGGAGTTTGACCGGAGG+AGG + chr5.4:65387239-65387258 None:intergenic 65.0%
! CGGCCGTCGGAGTTGACTTC+CGG - chr5.4:65387266-65387285 MS.gene94241:intron 65.0%
! TGCTGCCACCCGGGTTGAGT+TGG - chr5.4:65390238-65390257 MS.gene94241:intron 65.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 65387077 65390675 65387077 ID=MS.gene94241
chr5.4 mRNA 65387077 65390675 65387077 ID=MS.gene94241.t1;Parent=MS.gene94241
chr5.4 exon 65390369 65390675 65390369 ID=MS.gene94241.t1.exon1;Parent=MS.gene94241.t1
chr5.4 CDS 65390369 65390675 65390369 ID=cds.MS.gene94241.t1;Parent=MS.gene94241.t1
chr5.4 exon 65388957 65389788 65388957 ID=MS.gene94241.t1.exon2;Parent=MS.gene94241.t1
chr5.4 CDS 65388957 65389788 65388957 ID=cds.MS.gene94241.t1;Parent=MS.gene94241.t1
chr5.4 exon 65388474 65388687 65388474 ID=MS.gene94241.t1.exon3;Parent=MS.gene94241.t1
chr5.4 CDS 65388474 65388687 65388474 ID=cds.MS.gene94241.t1;Parent=MS.gene94241.t1
chr5.4 exon 65388300 65388407 65388300 ID=MS.gene94241.t1.exon4;Parent=MS.gene94241.t1
chr5.4 CDS 65388300 65388407 65388300 ID=cds.MS.gene94241.t1;Parent=MS.gene94241.t1
chr5.4 exon 65387881 65388159 65387881 ID=MS.gene94241.t1.exon5;Parent=MS.gene94241.t1
chr5.4 CDS 65387881 65388159 65387881 ID=cds.MS.gene94241.t1;Parent=MS.gene94241.t1
chr5.4 exon 65387600 65387743 65387600 ID=MS.gene94241.t1.exon6;Parent=MS.gene94241.t1
chr5.4 CDS 65387600 65387743 65387600 ID=cds.MS.gene94241.t1;Parent=MS.gene94241.t1
chr5.4 exon 65387077 65387259 65387077 ID=MS.gene94241.t1.exon7;Parent=MS.gene94241.t1
chr5.4 CDS 65387077 65387259 65387077 ID=cds.MS.gene94241.t1;Parent=MS.gene94241.t1
Gene Sequence

>MS.gene94241

ATGGCTATGTCGAACAGTGTCGAAGCTGTGTTCGAATTTCTAAGAAAAAATGGATTATCAGAAGCAGAATCAGCTCTAAGACAAGACATCATTGATAAGAACAACAATGATCTTGCTTCCTTTGACTACGAGAAATTCTTTTTTCCAATGGTTCCTCCACCTCCTCCGGTCAAACTCCGCTCATTTACACGGCCGTCGGAGTTGACTTCCGGCGACGGTCAATTCTCCAAATCAAACTCTGTTTCTTCTGGAGAACAGTTTGTTAGCATCGGTTCTTCTACTTCTCCTTCTCGTGTTTCTTCTACAGGTACTCTTTTCATTTCAATAATCGATTATTTATTGATTATGCTTAGTTACTTCTTAATGATCAATTATCACTTTGTGTTTCTAGTATTAGTGATTATGCTCTGTTTTTTTTTTTTTTACTTTGTTTTCTTTGTTGTTAGAATGATGAAAGAATGAGAATTATTAATTAAGATCGTTAATTATTATTTTCTTGATTAACTAATGTTTAGTTAGATTTTTTAAGTGTTCTAATTTTAGTTTCTGCAATTTCTACATTTGGATCGCATAATAGATTGACCAAATTTGAATTTGTGTATTTTATTTAAGTTAATTTCAATTGCATGTTGTGTTTTAGGATTTTAAGTTATTCATAGTTGATGTTTATATCTTATATATATGATGATCTTGTAACCAAAATATCTTATATATGATCTGCATTTTTATTTTTCTTTAATTGAATTTATGTTTCCAAATTTGGATTATATTAAGCTTAGTTATTAGTATTTTATATTTTTTTAATAAATTCAATTAATGTTGAAAATTTGTAATGCATAAAAATAGGGAAATATATAACCTAGATTTATTTATTTTTTTTGTTGCAGAATTTATCAATCCATATGGAATTAATTCCTCATCTCAGACTCAGAATGATTCTGAATCTTCATCTGATAGATTGTCCCAATTCGGCACAGCACGCGATTATCACGAATTCGATATGCAACATGAACCGTATTGGTATAATGAAAACGATGATGATGATGATTTCATGACTCCTGATTTTGATGGACCTGATTTCTTTGGATGTCAAAGTGAAGATAAGTTTATCTTGAATTCAGAAACCGAAAATCAACAAGATGATTCTCGTGATCTTCGTTACAACTTTGAAGAAATTCAGTTAGATGGAAATGAGGGTTACATAGATAAGTCAATGGAGCAATGCCTTTGTAATCATTCATCTGGAGGTGATGAAAATGCGACTTATTCGAAAGATTATTGTCACGGGGTCGAGAAAGACACTATTGCACATAATTGTGAAGTTCCATTTTGCAAAAGCAGTCCAGGTTCAGGAGGTTCTTGTAGCGAGGATCCTATGAACTTTAGCTACCTTAATTTGAAGGAAATTAAGCTGAATCTGAATGATTTTCATATGAAGGATATTAATTCGTTTGAGTCTGTTCCTGTGCTTACCATGAAGCATAGTTCAGATTGCTACAAGGATCCCTATGACTTAACCATCGAAGTTGTTGAAACAGATCTACCAAATGGGATCGAAAGCTATGGAGTAAGAGATGACCGAGATTTGAGTGAAGAACTCCATGTTCCGGAGGTTACCGCAGATGAAGAGGATAATAATACCGATGATGACCTCTTAAAATACATTCAAGATGATGAATATGAAGTATTTGAGCTAAGAATTGTACATAGAAAGAACAGGTTTGCTTGTTAATGATCTTGTGTCGTGAACTTTCATTTCTACTTAATATTCTCGATAATGCTGGTGGATAAATTGATTTTGAATGTGTAGGAGACTAGTTGTTGGTAAAATTTGAAATCAAATGCTTTTACTTTTCTTATTTTTAGCACTTCAACTTTTTCGTTTTTGTCATTAATTTAGTTCACCATGATTTTGACCTAACATTATTCACTTTTTCTCTTTAAGTATTCTGACAATAATTTTCTACCATCTATTGTTGAATCTACAGGACTGGATTTGAAGAAAACAAGGAAGTGCCAATTGTGCTCAACTCGGTCATGGCTGGAAGGTACTATGTGACAGAATATCTCGGTTCAGCTGCATTCAGTAGGGTTGTTCAAGCCCATGATCTTCAGATGGGAATCGATGTTTGTTTGAAGATTATTAAAAATGACAAGGATTTCTTTGATCAAAGCCTAGATGAAATTAAGCTTCTTAAACTTGTCAATAAGCATGACCCGGGAGATAAACACCACATACTGCGTCTTTATGACTATTTCTACCATCAGGAACATTTATTCATTGTGACCGAACTTCTGCGTGCAAACTTATATGAATTTCAGAAATTCAACCAAGAATCTGGTGGTGAAGCATATTTTACATTAAAGAGATTGCAGGTTTGTTCAACTAGACTAATTAACTTTTGCACCTATTCCACGTCATTGCTTATCAATTTGAATAGATTTTTTTTTTTTTGTCGGAAATAGAGAAATTGTGAAGGCATGATGATCAGAGTTGTTGTTATCCTTCTTTGCAGCTCATTACTCGACAGTGTTTGGAGGCATTGCAATATTTACATAACTTGGGAATTGTTCACTGCGACCTGAAGCCTGAAAACGTTCTGATCAAAAGTTACAAAAAATGTGAAATAAAGATTATTGATCTTGGAAGCAGTTGCTTTAAAACAGACAATCTGTGTCTATATGTACAATCCCGGTCTTATAGAGCTCCTGAAGTGATGTTAGGCCTTCAATATGATGAAAAGATTGATATATGGTCGCTCGGCTGTATTTTGGCTGAGCTATGCTCCGGTGAAGTACGTCCTAATTTGCATTTCTTATGATATTAATGAAATACATTTTTCTATGGCTCTTACAAAAACATGGAATTTTGATTTTCTTTCAAAGATTTCTTTTGTATACTTGTTGATTCTAAGTTCTTTTTTGGCTCCAGGTGCTCTTTCCAAATGATGCAGTCGTGATGATTCTTGCACGCATGATTGGAATGTTTGGTCCTTTTGATATGGAGATGTTGGTGAAAGGGCAGGAAACACATAAGTACTTCACTAAAGAATATGACATTTACTTCATAAATGAGGTTTGTTTCCTTTTAGCTGTTCCTTTTTTAACATATTTCGTTTGTTTTTATTCATCAATCCTAGGTTGAAATACTTTTTTCATGTTGCTGCCACCCGGGTTGAGTTGGATTATGCCTGAAAAAACTTTTTACTCGTTAAACAATGTCTCAAATTCGAGTCTCGTGAATGAAAAAAATAGGCCACTCCACTCAACTCGGATTCTAGACCAAAAAAGAAAAGTATATGTTAGTGTTGGTTATTCGCAATAAAGAAAATAAATGACCTTAGATTTATCAGAAAAATCAAGCCATCCATTCAAATTACATTTTTTCCCCAACCAATCTTTAATAATGTACACAGGAGACAGATCAACTAGAGTACATAATTCCAGAAGAGACATCATTGGAGCACCACCTACAGGTCACTGATACTATGTTTATCGACTTTGTCAGTTACTTGCTTAACGTCAACCCCAAAAGAAGGCCTACTGCAAGACAGGCACTAAAACATCCATGGCTTTCCCATGTATACAAGTCCATGTAA
Protein sequence

>MS.gene94241.t1

MAMSNSVEAVFEFLRKNGLSEAESALRQDIIDKNNNDLASFDYEKFFFPMVPPPPPVKLRSFTRPSELTSGDGQFSKSNSVSSGEQFVSIGSSTSPSRVSSTEFINPYGINSSSQTQNDSESSSDRLSQFGTARDYHEFDMQHEPYWYNENDDDDDFMTPDFDGPDFFGCQSEDKFILNSETENQQDDSRDLRYNFEEIQLDGNEGYIDKSMEQCLCNHSSGGDENATYSKDYCHGVEKDTIAHNCEVPFCKSSPGSGGSCSEDPMNFSYLNLKEIKLNLNDFHMKDINSFESVPVLTMKHSSDCYKDPYDLTIEVVETDLPNGIESYGVRDDRDLSEELHVPEVTADEEDNNTDDDLLKYIQDDEYEVFELRIVHRKNRTGFEENKEVPIVLNSVMAGRYYVTEYLGSAAFSRVVQAHDLQMGIDVCLKIIKNDKDFFDQSLDEIKLLKLEHLFIVTELLRANLYEFQKFNQESGGEAYFTLKRLQLITRQCLEALQYLHNLGIVHCDLKPENVLIKSYKKCEIKIIDLGSSCFKTDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILARMIGMFGPFDMEMLVKGQETHKYFTKEYDIYFINEETDQLEYIIPEETSLEHHLQVTDTMFIDFVSYLLNVNPKRRPTARQALKHPWLSHVYKSM