Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94496.t1 | XP_003615317.1 | 97.2 | 287 | 7 | 1 | 1 | 287 | 1 | 286 | 8.80E-155 | 556.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94496.t1 | Q9LRH6 | 59.2 | 196 | 78 | 1 | 72 | 265 | 81 | 276 | 7.5e-54 | 212.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94496.t1 | G7JYF5 | 97.2 | 287 | 7 | 1 | 1 | 287 | 1 | 286 | 6.3e-155 | 556.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene94496.t1 | TF | C2C2-GATA |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94496.t1 | MTR_5g066510 | 97.213 | 287 | 7 | 1 | 1 | 287 | 1 | 286 | 0.0 | 581 |
| MS.gene94496.t1 | MTR_5g066510 | 97.525 | 202 | 5 | 0 | 1 | 202 | 1 | 202 | 3.02e-147 | 411 |
| MS.gene94496.t1 | MTR_3g100050 | 60.465 | 258 | 71 | 8 | 46 | 275 | 42 | 296 | 4.77e-93 | 278 |
| MS.gene94496.t1 | MTR_3g100040 | 54.595 | 185 | 76 | 5 | 74 | 252 | 69 | 251 | 2.91e-57 | 187 |
| MS.gene94496.t1 | MTR_4g093730 | 51.208 | 207 | 80 | 8 | 53 | 245 | 20 | 219 | 4.16e-56 | 184 |
| MS.gene94496.t1 | MTR_3g100040 | 59.504 | 121 | 46 | 1 | 135 | 252 | 27 | 147 | 2.22e-45 | 154 |
| MS.gene94496.t1 | MTR_1g061610 | 67.647 | 68 | 21 | 1 | 39 | 106 | 42 | 108 | 5.53e-24 | 94.4 |
| MS.gene94496.t1 | MTR_4g008070 | 53.659 | 82 | 24 | 4 | 167 | 237 | 1 | 79 | 4.26e-18 | 77.8 |
| MS.gene94496.t1 | MTR_3g060200 | 38.462 | 104 | 57 | 3 | 159 | 259 | 4 | 103 | 8.46e-15 | 74.3 |
| MS.gene94496.t1 | MTR_3g060200 | 38.462 | 104 | 57 | 3 | 159 | 259 | 4 | 103 | 9.59e-15 | 73.6 |
| MS.gene94496.t1 | MTR_3g060200 | 38.462 | 104 | 57 | 3 | 159 | 259 | 4 | 103 | 1.08e-14 | 74.3 |
| MS.gene94496.t1 | MTR_3g060200 | 38.462 | 104 | 57 | 3 | 159 | 259 | 4 | 103 | 1.12e-14 | 73.9 |
| MS.gene94496.t1 | MTR_4g008090 | 50.000 | 80 | 30 | 3 | 93 | 166 | 12 | 87 | 3.36e-12 | 62.8 |
| MS.gene94496.t1 | MTR_4g108880 | 52.459 | 61 | 27 | 1 | 135 | 195 | 505 | 563 | 3.29e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94496.t1 | AT4G24470 | 58.586 | 198 | 80 | 1 | 72 | 267 | 81 | 278 | 5.71e-74 | 229 |
| MS.gene94496.t1 | AT4G24470 | 58.586 | 198 | 80 | 1 | 72 | 267 | 81 | 278 | 5.71e-74 | 229 |
| MS.gene94496.t1 | AT4G24470 | 62.778 | 180 | 65 | 1 | 72 | 249 | 81 | 260 | 1.57e-73 | 228 |
| MS.gene94496.t1 | AT1G51600 | 59.893 | 187 | 64 | 4 | 70 | 245 | 79 | 265 | 1.03e-68 | 215 |
| MS.gene94496.t1 | AT1G51600 | 59.893 | 187 | 64 | 4 | 70 | 245 | 79 | 265 | 1.03e-68 | 215 |
| MS.gene94496.t1 | AT3G21175 | 51.452 | 241 | 84 | 7 | 38 | 245 | 21 | 261 | 3.27e-68 | 214 |
| MS.gene94496.t1 | AT3G21175 | 51.667 | 240 | 83 | 7 | 38 | 245 | 21 | 259 | 2.49e-67 | 211 |
| MS.gene94496.t1 | AT3G21175 | 47.802 | 182 | 69 | 6 | 38 | 194 | 21 | 201 | 7.52e-38 | 133 |
| MS.gene94496.t1 | AT2G46670 | 50.909 | 55 | 27 | 0 | 129 | 183 | 126 | 180 | 3.47e-11 | 61.6 |
| MS.gene94496.t1 | AT2G46790 | 50.909 | 55 | 27 | 0 | 129 | 183 | 254 | 308 | 6.42e-11 | 62.4 |
| MS.gene94496.t1 | AT2G46790 | 50.909 | 55 | 27 | 0 | 129 | 183 | 254 | 308 | 6.42e-11 | 62.4 |
| MS.gene94496.t1 | AT2G46790 | 50.909 | 55 | 27 | 0 | 129 | 183 | 411 | 465 | 6.73e-11 | 62.8 |
| MS.gene94496.t1 | AT2G46790 | 50.909 | 55 | 27 | 0 | 129 | 183 | 294 | 348 | 8.15e-11 | 62.4 |
Find 79 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTTTGAAGTGCAAATTC+AGG | 0.278085 | 5.1:+14284511 | None:intergenic |
| ATGGCCCTCGCCGCATCATT+GGG | 0.283489 | 5.1:+14281460 | None:intergenic |
| TCCAACTCCGATGCTGTTTA+CGG | 0.309806 | 5.1:-14284550 | MS.gene94496:CDS |
| GATGGCCCTCGCCGCATCAT+TGG | 0.329482 | 5.1:+14281459 | None:intergenic |
| GTTGTAGATGGTTGCTCAAT+AGG | 0.337983 | 5.1:+14280260 | None:intergenic |
| TCGCTTTCGCCGGCGGTGAT+TGG | 0.358806 | 5.1:+14284646 | None:intergenic |
| CTGGTCTGTACCACAACTAT+TGG | 0.364949 | 5.1:+14281732 | None:intergenic |
| GAAAGAAATACCTGCTCAAC+AGG | 0.391041 | 5.1:+14280585 | None:intergenic |
| GGTCACTTTGCAATGCTTGT+GGG | 0.405446 | 5.1:-14281428 | MS.gene94496:CDS |
| ATGATGCGGCGAGGGCCATC+TGG | 0.424046 | 5.1:-14281456 | MS.gene94496:CDS |
| AAGCCTCATTACTTAGGTTC+CGG | 0.424048 | 5.1:-14283247 | MS.gene94496:CDS |
| GTCGATGCCGGCGTCGGGAC+CGG | 0.425728 | 5.1:+14284615 | None:intergenic |
| GGCGAAAGCGATGACGGTTC+CGG | 0.429809 | 5.1:-14284634 | MS.gene94496:CDS |
| CAGCTTACGCTGTCGTTTCG+TGG | 0.436824 | 5.1:-14284475 | MS.gene94496:CDS |
| AGGTCACTTTGCAATGCTTG+TGG | 0.439332 | 5.1:-14281429 | MS.gene94496:CDS |
| TTTCTGATGGACTGGCATCC+TGG | 0.442732 | 5.1:+14281701 | None:intergenic |
| TCAATCGGTGTTGTTACTGT+TGG | 0.455881 | 5.1:-14284197 | MS.gene94496:CDS |
| CAATCGGTGTTGTTACTGTT+GGG | 0.455920 | 5.1:-14284196 | MS.gene94496:CDS |
| AGATAATTCCTGATGTCTCT+TGG | 0.456240 | 5.1:+14280614 | None:intergenic |
| ATCTTTCTTTCCTCTTCTGC+CGG | 0.458420 | 5.1:+14283228 | None:intergenic |
| ATGTAGGATGCAGCGAAAGA+AGG | 0.464044 | 5.1:-14281788 | MS.gene94496:intron |
| TGAGCGTCGATGCCGGCGTC+GGG | 0.466145 | 5.1:+14284610 | None:intergenic |
| TACTAGCAAATAGTTGTAGA+TGG | 0.470683 | 5.1:+14280248 | None:intergenic |
| ATCTACTGTACCTGTTGAGC+AGG | 0.474916 | 5.1:-14280595 | MS.gene94496:intron |
| CGGTGCCTCAACAAAGTTTG+AGG | 0.475750 | 5.1:-14284141 | MS.gene94496:CDS |
| ATTGAGAATCGAACCTTAGC+AGG | 0.477071 | 5.1:+14284424 | None:intergenic |
| CAAGCATTGCAAAGTGACCT+TGG | 0.478461 | 5.1:+14281432 | None:intergenic |
| GCCGTAAACAGCATCGGAGT+TGG | 0.479472 | 5.1:+14284549 | None:intergenic |
| TGTAGGATGCAGCGAAAGAA+GGG | 0.482115 | 5.1:-14281787 | MS.gene94496:intron |
| GACGGTTCCGGTCCCGACGC+CGG | 0.488975 | 5.1:-14284622 | MS.gene94496:CDS |
| TGGCATCCTGGCTAGAATCC+TGG | 0.494476 | 5.1:+14281713 | None:intergenic |
| TCAGTACGAAACGCACGGTA+TGG | 0.494591 | 5.1:-14284578 | MS.gene94496:CDS |
| TGACTCTGTTACGCCTGCTA+AGG | 0.495608 | 5.1:-14284437 | MS.gene94496:intron |
| ACCGCATTCACACCAGCATC+AGG | 0.496179 | 5.1:+14284160 | None:intergenic |
| ATCGAGAAGCCTCATTACTT+AGG | 0.501589 | 5.1:-14283253 | MS.gene94496:CDS |
| TTTCATGTTACAGGTTCAAT+CGG | 0.502821 | 5.1:-14284212 | MS.gene94496:intron |
| TACTTAGGTTCCGGCAGAAG+AGG | 0.507196 | 5.1:-14283238 | MS.gene94496:CDS |
| ACTACATCTAAGAAACAAGA+TGG | 0.513677 | 5.1:-14281757 | MS.gene94496:CDS |
| TCCGATGCTGTTTACGGCAA+CGG | 0.517634 | 5.1:-14284544 | MS.gene94496:CDS |
| TTGAGCGTCGATGCCGGCGT+CGG | 0.518484 | 5.1:+14284609 | None:intergenic |
| ATTGGTACTGTGGTGTTCAA+AGG | 0.519474 | 5.1:+14284664 | None:intergenic |
| CGACCCCAATGATGCGGCGA+GGG | 0.521861 | 5.1:-14281464 | MS.gene94496:CDS |
| AGACCTTTCCAAGAGACATC+AGG | 0.523306 | 5.1:-14280622 | MS.gene94496:CDS |
| ACCGTCATCGCTTTCGCCGG+CGG | 0.524563 | 5.1:+14284639 | None:intergenic |
| TCACGAGATTTCTGATGGAC+TGG | 0.530433 | 5.1:+14281693 | None:intergenic |
| GGTTGAGAGTGTTCGTACAT+TGG | 0.539771 | 5.1:+14284685 | None:intergenic |
| TGCAATGACTAGGTTGATCA+AGG | 0.540649 | 5.1:-14280332 | MS.gene94496:intron |
| CAAAGTGACCTTGGACCAGA+TGG | 0.549647 | 5.1:+14281441 | None:intergenic |
| TGAGAGTGTTCGTACATTGG+TGG | 0.550890 | 5.1:+14284688 | None:intergenic |
| TTGATGTTGAGCGTCGATGC+CGG | 0.559465 | 5.1:+14284603 | None:intergenic |
| GGAACCGTCATCGCTTTCGC+CGG | 0.559788 | 5.1:+14284636 | None:intergenic |
| TACAGACCAGGATTCTAGCC+AGG | 0.560530 | 5.1:-14281719 | MS.gene94496:CDS |
| CAAGCTCACGAGATTTCTGA+TGG | 0.565628 | 5.1:+14281688 | None:intergenic |
| CAATAGTTGTGGTACAGACC+AGG | 0.567890 | 5.1:-14281731 | MS.gene94496:CDS |
| GGATGTGAACAACCTGATGC+TGG | 0.568670 | 5.1:-14284172 | MS.gene94496:CDS |
| CTGCCGGAACCTAAGTAATG+AGG | 0.570375 | 5.1:+14283244 | None:intergenic |
| ATTCCTGATGTCTCTTGGAA+AGG | 0.575092 | 5.1:+14280619 | None:intergenic |
| ACCGCCGGCGAAAGCGATGA+CGG | 0.576304 | 5.1:-14284640 | MS.gene94496:CDS |
| GGTGCCTCAACAAAGTTTGA+GGG | 0.580121 | 5.1:-14284140 | MS.gene94496:CDS |
| ATAGGAGTGATGTTGTGTGC+AGG | 0.580688 | 5.1:+14280278 | None:intergenic |
| GCCGTTGCCGTAAACAGCAT+CGG | 0.590158 | 5.1:+14284543 | None:intergenic |
| GGCGAGGGCCATCTGGTCCA+AGG | 0.590488 | 5.1:-14281449 | MS.gene94496:CDS |
| CAAGATGGGTCCAATAGTTG+TGG | 0.595326 | 5.1:-14281742 | MS.gene94496:CDS |
| TTAAATAGTTGCACACATTG+TGG | 0.601041 | 5.1:-14281501 | MS.gene94496:intron |
| CAAGGTAACAACTCAGACTG+TGG | 0.601587 | 5.1:-14280314 | MS.gene94496:CDS |
| TCGGTGTTGTTACTGTTGGG+TGG | 0.618046 | 5.1:-14284193 | MS.gene94496:CDS |
| TACGTCAAGAAGTTGCACTC+AGG | 0.620095 | 5.1:-14283178 | MS.gene94496:intron |
| ACCACCCTCAAACTTTGTTG+AGG | 0.626395 | 5.1:+14284136 | None:intergenic |
| TAGGAGTGATGTTGTGTGCA+GGG | 0.638031 | 5.1:+14280279 | None:intergenic |
| CTACATCTAAGAAACAAGAT+GGG | 0.649224 | 5.1:-14281756 | MS.gene94496:CDS |
| CAAAATCGACCCCAATGATG+CGG | 0.651595 | 5.1:-14281470 | MS.gene94496:CDS |
| ACCACAGTACCAATCACCGC+CGG | 0.655305 | 5.1:-14284655 | MS.gene94496:CDS |
| GCCTCAACAAAGTTTGAGGG+TGG | 0.655336 | 5.1:-14284137 | MS.gene94496:intron |
| TCGACCCCAATGATGCGGCG+AGG | 0.660240 | 5.1:-14281465 | MS.gene94496:CDS |
| GATGCTGTTTACGGCAACGG+CGG | 0.661829 | 5.1:-14284541 | MS.gene94496:CDS |
| ACCTGATGCTGGTGTGAATG+CGG | 0.662406 | 5.1:-14284161 | MS.gene94496:CDS |
| GCCGGCGGTGATTGGTACTG+TGG | 0.669157 | 5.1:+14284654 | None:intergenic |
| TGGCCCTCGCCGCATCATTG+GGG | 0.672900 | 5.1:+14281461 | None:intergenic |
| CAAATTCAGTACGAAACGCA+CGG | 0.681403 | 5.1:-14284583 | MS.gene94496:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTATGTTTAAATGT+AGG | - | chr5.1:14283140-14283159 | MS.gene94496:intron | 10.0% |
| !!! | TTTGATTAAAATTTGTTTAA+GGG | + | chr5.1:14284475-14284494 | None:intergenic | 10.0% |
| !!! | TTTTGATTAAAATTTGTTTA+AGG | + | chr5.1:14284476-14284495 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAAAGCCTT+TGG | + | chr5.1:14283573-14283592 | None:intergenic | 15.0% |
| !! | AATGGAAATTATTAATTCTT+TGG | - | chr5.1:14281619-14281638 | MS.gene94496:intron | 15.0% |
| !! | ATGGAAATTATTAATTCTTT+GGG | - | chr5.1:14281620-14281639 | MS.gene94496:intron | 15.0% |
| !!! | AGTTGAATTTTTTAGTTATT+TGG | - | chr5.1:14280689-14280708 | MS.gene94496:intron | 15.0% |
| !!! | CTTAATCTTGTATTTTTTAA+TGG | - | chr5.1:14283029-14283048 | MS.gene94496:intron | 15.0% |
| !!! | GTTGAATTTTTTAGTTATTT+GGG | - | chr5.1:14280690-14280709 | MS.gene94496:intron | 15.0% |
| !!! | TCAGAACAAAAAATATATTT+TGG | + | chr5.1:14283300-14283319 | None:intergenic | 15.0% |
| !!! | TGTTTATTATTGATTTTTCT+TGG | - | chr5.1:14280573-14280592 | MS.gene94496:intron | 15.0% |
| !! | AAATTATATCTGATACGTAT+CGG | + | chr5.1:14281293-14281312 | None:intergenic | 20.0% |
| !! | AAGAGAATAATATAACTGAA+TGG | - | chr5.1:14281958-14281977 | MS.gene94496:intron | 20.0% |
| !! | ATACAACAACAGATATTTAT+GGG | - | chr5.1:14282286-14282305 | MS.gene94496:intron | 20.0% |
| !! | ATCTATACTATAAAGGAAAT+AGG | - | chr5.1:14284415-14284434 | MS.gene94496:intron | 20.0% |
| !! | ATTTGAATATGCATTAGATT+TGG | - | chr5.1:14280912-14280931 | MS.gene94496:intron | 20.0% |
| !! | CATAAAATAAAGAGTGAAAT+TGG | + | chr5.1:14283131-14283150 | None:intergenic | 20.0% |
| !! | CATCATAATCTATACTATAA+AGG | - | chr5.1:14284408-14284427 | MS.gene94496:intron | 20.0% |
| !! | CATCATTCATAAATCATAAT+AGG | - | chr5.1:14281148-14281167 | MS.gene94496:intron | 20.0% |
| !! | CTATGAGATATAAATTATTG+AGG | + | chr5.1:14282855-14282874 | None:intergenic | 20.0% |
| !! | TATACAACAACAGATATTTA+TGG | - | chr5.1:14282285-14282304 | MS.gene94496:intron | 20.0% |
| !! | TATATTACATAGAATCATGT+TGG | - | chr5.1:14282095-14282114 | MS.gene94496:intron | 20.0% |
| !! | TGAAAATAATTGTATGTAAG+AGG | + | chr5.1:14282064-14282083 | None:intergenic | 20.0% |
| !! | TTTATCAACAAATTTAACAG+AGG | + | chr5.1:14282429-14282448 | None:intergenic | 20.0% |
| !! | TTTGAATATGCATTAGATTT+GGG | - | chr5.1:14280913-14280932 | MS.gene94496:intron | 20.0% |
| !!! | ACGTATCAGATATAATTTTA+TGG | - | chr5.1:14281295-14281314 | MS.gene94496:intron | 20.0% |
| !!! | ATTATTAATTCTTTGGGTTT+TGG | - | chr5.1:14281626-14281645 | MS.gene94496:intron | 20.0% |
| !!! | TTGTTTCTAAACTAAACAAT+AGG | + | chr5.1:14282722-14282741 | None:intergenic | 20.0% |
| !!! | TTTGGGAATATCAAAATTTT+GGG | - | chr5.1:14284044-14284063 | MS.gene94496:intron | 20.0% |
| !!! | TTTGTTGTGAAACAAATTTA+TGG | + | chr5.1:14283973-14283992 | None:intergenic | 20.0% |
| !!! | TTTTTTGAAAATTTGTCTGT+GGG | - | chr5.1:14283592-14283611 | MS.gene94496:intron | 20.0% |
| !!! | TTTTTTTGAAAATTTGTCTG+TGG | - | chr5.1:14283591-14283610 | MS.gene94496:intron | 20.0% |
| ! | AAGATAAAGCAAAACAAACA+CGG | + | chr5.1:14283822-14283841 | None:intergenic | 25.0% |
| ! | ACAAGCAATTTAAAGAATAG+TGG | + | chr5.1:14283423-14283442 | None:intergenic | 25.0% |
| ! | ATAAGTACTACTACTATCAT+GGG | + | chr5.1:14281338-14281357 | None:intergenic | 25.0% |
| ! | CAAGCAAAAAAATGGTAAAA+TGG | + | chr5.1:14284594-14284613 | None:intergenic | 25.0% |
| ! | TCTCATCAATACATTTGTAT+AGG | - | chr5.1:14283005-14283024 | MS.gene94496:intron | 25.0% |
| ! | TGAGAATCAAAATCATTTGA+AGG | + | chr5.1:14282543-14282562 | None:intergenic | 25.0% |
| ! | TTAATTGTTTGATACTTTCC+AGG | + | chr5.1:14281242-14281261 | None:intergenic | 25.0% |
| ! | TTTATATCTCATAGAGTGAA+AGG | - | chr5.1:14282861-14282880 | MS.gene94496:intron | 25.0% |
| !! | AGTACTTATGATTTCCTTTT+TGG | - | chr5.1:14281349-14281368 | MS.gene94496:intron | 25.0% |
| !! | ATAAAGGAAATAGGTTGTTT+TGG | - | chr5.1:14284424-14284443 | MS.gene94496:intron | 25.0% |
| !! | GTTTGGGAATATCAAAATTT+TGG | - | chr5.1:14284043-14284062 | MS.gene94496:intron | 25.0% |
| !! | TATACAAATGTATTGATGAG+AGG | + | chr5.1:14283006-14283025 | None:intergenic | 25.0% |
| !! | TGTAGTTGACTATATTTTGT+AGG | + | chr5.1:14281672-14281691 | None:intergenic | 25.0% |
| !! | TGTTTAAGGGTATAATTGAA+AGG | + | chr5.1:14284462-14284481 | None:intergenic | 25.0% |
| !!! | AGATATTTTGAAATGTCTTG+TGG | - | chr5.1:14283895-14283914 | MS.gene94496:intron | 25.0% |
| !!! | ATATTGCTTTTTGAACTTTG+TGG | - | chr5.1:14284078-14284097 | MS.gene94496:intron | 25.0% |
| !!! | GATGCATTGTTATTTCATAT+TGG | + | chr5.1:14283360-14283379 | None:intergenic | 25.0% |
| !!! | TAAAGGAAATAGGTTGTTTT+GGG | - | chr5.1:14284425-14284444 | MS.gene94496:intron | 25.0% |
| !!! | TTCTTTTAAAACTTGTCAGA+GGG | - | chr5.1:14284107-14284126 | MS.gene94496:intron | 25.0% |
| !!! | TTTAATGGACTAAAAACTGA+CGG | - | chr5.1:14283044-14283063 | MS.gene94496:intron | 25.0% |
| !!! | TTTCTTTTAAAACTTGTCAG+AGG | - | chr5.1:14284106-14284125 | MS.gene94496:intron | 25.0% |
| AAAATCGAATTATCGTCTCT+TGG | - | chr5.1:14284158-14284177 | MS.gene94496:CDS | 30.0% | |
| AAAGAAAACACGATCATACT+GGG | + | chr5.1:14282029-14282048 | None:intergenic | 30.0% | |
| AAATCGAATTATCGTCTCTT+GGG | - | chr5.1:14284159-14284178 | MS.gene94496:CDS | 30.0% | |
| ACTACATCTAAGAAACAAGA+TGG | - | chr5.1:14283187-14283206 | MS.gene94496:CDS | 30.0% | |
| AGGAGTGGATATATTGATAA+TGG | - | chr5.1:14281063-14281082 | MS.gene94496:intron | 30.0% | |
| AGTCATTGCAAGCAAAAAAA+TGG | + | chr5.1:14284602-14284621 | None:intergenic | 30.0% | |
| ATACGTGCTTCATAGATAAT+AGG | - | chr5.1:14281574-14281593 | MS.gene94496:intron | 30.0% | |
| ATAGAATCATGTTGGCATTT+AGG | - | chr5.1:14282103-14282122 | MS.gene94496:intron | 30.0% | |
| ATCTAGTGGTATATAATGTC+TGG | - | chr5.1:14284000-14284019 | MS.gene94496:intron | 30.0% | |
| ATGTTCCACTTTCTCTTATT+TGG | - | chr5.1:14283082-14283101 | MS.gene94496:intron | 30.0% | |
| ATTTACCAATTCCTATGTTG+AGG | + | chr5.1:14281090-14281109 | None:intergenic | 30.0% | |
| ATTTATGAGCTCTGTCTATT+TGG | - | chr5.1:14283865-14283884 | MS.gene94496:intron | 30.0% | |
| CAACAAAATGAAGAATCTAG+TGG | - | chr5.1:14283986-14284005 | MS.gene94496:intron | 30.0% | |
| CATAAGTACTACTACTATCA+TGG | + | chr5.1:14281339-14281358 | None:intergenic | 30.0% | |
| CTAAGTTATCCTCAAATTCT+CGG | + | chr5.1:14282590-14282609 | None:intergenic | 30.0% | |
| CTACATCTAAGAAACAAGAT+GGG | - | chr5.1:14283188-14283207 | MS.gene94496:CDS | 30.0% | |
| CTCAAAAAATGCCAAAGTAT+CGG | - | chr5.1:14281187-14281206 | MS.gene94496:intron | 30.0% | |
| CTGTTGTTGTATAGTCAATT+TGG | + | chr5.1:14282278-14282297 | None:intergenic | 30.0% | |
| GAAAATAACACACAAAACCA+AGG | + | chr5.1:14282480-14282499 | None:intergenic | 30.0% | |
| GATTAATGTTCAAGTGCAAA+TGG | - | chr5.1:14281601-14281620 | MS.gene94496:intron | 30.0% | |
| GGGAACTGTTAATAATAAAC+TGG | + | chr5.1:14284259-14284278 | None:intergenic | 30.0% | |
| TGGGATTGAAAATTCGTATT+TGG | - | chr5.1:14280709-14280728 | MS.gene94496:intron | 30.0% | |
| TGGTGTATGCTATATGTAAT+TGG | - | chr5.1:14282915-14282934 | MS.gene94496:intron | 30.0% | |
| TTAAATAGTTGCACACATTG+TGG | - | chr5.1:14283443-14283462 | MS.gene94496:intron | 30.0% | |
| TTTCATGTTACAGGTTCAAT+CGG | - | chr5.1:14280732-14280751 | MS.gene94496:intron | 30.0% | |
| ! | AGACGATAATTCGATTTTTG+AGG | + | chr5.1:14284156-14284175 | None:intergenic | 30.0% |
| ! | ATTTTCAACATGTTACAAGC+TGG | + | chr5.1:14280887-14280906 | None:intergenic | 30.0% |
| ! | CAATTTCAACTTCGTTGATT+TGG | - | chr5.1:14282309-14282328 | MS.gene94496:intron | 30.0% |
| ! | CTTATGATTTCCTTTTTGGA+CGG | - | chr5.1:14281353-14281372 | MS.gene94496:intron | 30.0% |
| ! | GATATAATTTTATGGTGCTC+CGG | - | chr5.1:14281303-14281322 | MS.gene94496:intron | 30.0% |
| ! | TGTATAGTCAATTTGGTAAC+AGG | + | chr5.1:14282271-14282290 | None:intergenic | 30.0% |
| ! | TGTTAGTTTCTTGTCTACTA+TGG | + | chr5.1:14282759-14282778 | None:intergenic | 30.0% |
| ! | TTCATTTATGCCCTTTTGAT+TGG | - | chr5.1:14282451-14282470 | MS.gene94496:intron | 30.0% |
| !! | AAACTTTGAAGTGCAAATTC+AGG | + | chr5.1:14280436-14280455 | None:intergenic | 30.0% |
| !! | AGGGTCTGACAATTTAATTT+TGG | - | chr5.1:14282244-14282263 | MS.gene94496:intron | 30.0% |
| !! | CTTTTTAATTGTGGAGGAAT+TGG | - | chr5.1:14282366-14282385 | MS.gene94496:intron | 30.0% |
| !!! | CTTTGGCATTTTTTGAGTAA+CGG | + | chr5.1:14281184-14281203 | None:intergenic | 30.0% |
| !!! | GCTTGTTTTTACTGTTGTTA+TGG | - | chr5.1:14283274-14283293 | MS.gene94496:CDS | 30.0% |
| !!! | TTTGGCATTTTTTGAGTAAC+GGG | + | chr5.1:14281183-14281202 | None:intergenic | 30.0% |
| !!! | TTTTTTTGCTTGCAATGACT+AGG | - | chr5.1:14284602-14284621 | MS.gene94496:CDS | 30.0% |
| AACCTATACTATTGAGAACC+TGG | - | chr5.1:14282342-14282361 | MS.gene94496:intron | 35.0% | |
| AAGAGCCAAATAAGAGAAAG+TGG | + | chr5.1:14283090-14283109 | None:intergenic | 35.0% | |
| AAGGTTCGATTCTCAATTGT+TGG | - | chr5.1:14280526-14280545 | MS.gene94496:intron | 35.0% | |
| AATCGAATTATCGTCTCTTG+GGG | - | chr5.1:14284160-14284179 | MS.gene94496:CDS | 35.0% | |
| AGATAATTCCTGATGTCTCT+TGG | + | chr5.1:14284333-14284352 | None:intergenic | 35.0% | |
| ATACTTTCCAGGTACATATC+AGG | + | chr5.1:14281231-14281250 | None:intergenic | 35.0% | |
| ATATCTCATAGAGTGAAAGG+TGG | - | chr5.1:14282864-14282883 | MS.gene94496:intron | 35.0% | |
| ATCATGCATCCAAGATACAT+GGG | + | chr5.1:14282831-14282850 | None:intergenic | 35.0% | |
| CAAAGAAAACACGATCATAC+TGG | + | chr5.1:14282030-14282049 | None:intergenic | 35.0% | |
| CACGTATACTTGACATGATA+AGG | + | chr5.1:14281561-14281580 | None:intergenic | 35.0% | |
| CGAGAATTTGAGGATAACTT+AGG | - | chr5.1:14282588-14282607 | MS.gene94496:intron | 35.0% | |
| GAATGTTGTTCTTTGACTAG+AGG | + | chr5.1:14282808-14282827 | None:intergenic | 35.0% | |
| GATTCACAGTTGAACGAATT+AGG | + | chr5.1:14284216-14284235 | None:intergenic | 35.0% | |
| TAGGTTAGGGGATATAAAGA+TGG | - | chr5.1:14281022-14281041 | MS.gene94496:intron | 35.0% | |
| TATCATGCATCCAAGATACA+TGG | + | chr5.1:14282832-14282851 | None:intergenic | 35.0% | |
| TCAACAATACCTGTAGGTTA+GGG | - | chr5.1:14281009-14281028 | MS.gene94496:intron | 35.0% | |
| TCATCATGCGAATGATGATT+GGG | - | chr5.1:14281855-14281874 | MS.gene94496:intron | 35.0% | |
| TGCAAATTCCAATGCAATGA+AGG | + | chr5.1:14283690-14283709 | None:intergenic | 35.0% | |
| TTCATCATGCGAATGATGAT+TGG | - | chr5.1:14281854-14281873 | MS.gene94496:intron | 35.0% | |
| ! | ATCTTAAGTACCGTCCAAAA+AGG | + | chr5.1:14281366-14281385 | None:intergenic | 35.0% |
| ! | CGTATTTGGTTTCATGTTAC+AGG | - | chr5.1:14280723-14280742 | MS.gene94496:intron | 35.0% |
| ! | GCATAGGATGGTAGATTTTA+CGG | - | chr5.1:14282217-14282236 | MS.gene94496:intron | 35.0% |
| ! | TATGCCACTTCAAAATGAGA+AGG | + | chr5.1:14282202-14282221 | None:intergenic | 35.0% |
| !! | ATTCGATTTTTGAGGATGAG+TGG | + | chr5.1:14284148-14284167 | None:intergenic | 35.0% |
| !! | ATTGCCTTCTCATTTTGAAG+TGG | - | chr5.1:14282195-14282214 | MS.gene94496:intron | 35.0% |
| !! | GAACCTGGTCTTTTTAATTG+TGG | - | chr5.1:14282357-14282376 | MS.gene94496:intron | 35.0% |
| !! | TTGATAATGGTCCTCAACAT+AGG | - | chr5.1:14281076-14281095 | MS.gene94496:intron | 35.0% |
| !!! | GGTCTATTTTTGCACTGTTT+GGG | - | chr5.1:14284027-14284046 | MS.gene94496:intron | 35.0% |
| !!! | TGGTCTATTTTTGCACTGTT+TGG | - | chr5.1:14284026-14284045 | MS.gene94496:intron | 35.0% |
| !!! | TTCTCATTTTGAAGTGGCAT+AGG | - | chr5.1:14282201-14282220 | MS.gene94496:intron | 35.0% |
| !!! | TTGGCATTTTTTGAGTAACG+GGG | + | chr5.1:14281182-14281201 | None:intergenic | 35.0% |
| AACCAAGGACACCAATCAAA+AGG | + | chr5.1:14282465-14282484 | None:intergenic | 40.0% | |
| AAGCCTCATTACTTAGGTTC+CGG | - | chr5.1:14281697-14281716 | MS.gene94496:CDS | 40.0% | |
| ACAACATTCCCCATGTATCT+TGG | - | chr5.1:14282819-14282838 | MS.gene94496:intron | 40.0% | |
| ACCAAGACCATTGTCAAAAG+GGG | + | chr5.1:14284280-14284299 | None:intergenic | 40.0% | |
| ACCAAGGACACCAATCAAAA+GGG | + | chr5.1:14282464-14282483 | None:intergenic | 40.0% | |
| ACTAGTTGACCGAGAATTTG+AGG | - | chr5.1:14282578-14282597 | MS.gene94496:intron | 40.0% | |
| AGACCAAGACCATTGTCAAA+AGG | + | chr5.1:14284282-14284301 | None:intergenic | 40.0% | |
| ATAAGGATACGACACGGATA+CGG | + | chr5.1:14281544-14281563 | None:intergenic | 40.0% | |
| ATAATGCCTTGTGACATGCT+TGG | - | chr5.1:14282895-14282914 | MS.gene94496:intron | 40.0% | |
| ATATCAGGATGTATCCGTGT+CGG | + | chr5.1:14281216-14281235 | None:intergenic | 40.0% | |
| ATCGAGAAGCCTCATTACTT+AGG | - | chr5.1:14281691-14281710 | MS.gene94496:intron | 40.0% | |
| ATCTTTCTTTCCTCTTCTGC+CGG | + | chr5.1:14281719-14281738 | None:intergenic | 40.0% | |
| ATGGTCCTCAACATAGGAAT+TGG | - | chr5.1:14281082-14281101 | MS.gene94496:intron | 40.0% | |
| ATTCCTGATGTCTCTTGGAA+AGG | + | chr5.1:14284328-14284347 | None:intergenic | 40.0% | |
| ATTGAGAATCGAACCTTAGC+AGG | + | chr5.1:14280523-14280542 | None:intergenic | 40.0% | |
| ATTGGTACTGTGGTGTTCAA+AGG | + | chr5.1:14280283-14280302 | None:intergenic | 40.0% | |
| ATTGTATGTAAGAGGAAGCC+TGG | + | chr5.1:14282056-14282075 | None:intergenic | 40.0% | |
| CAAATTCAGTACGAAACGCA+CGG | - | chr5.1:14280361-14280380 | MS.gene94496:intron | 40.0% | |
| CAACAATACCTGTAGGTTAG+GGG | - | chr5.1:14281010-14281029 | MS.gene94496:intron | 40.0% | |
| CCTCCACAATTAAAAAGACC+AGG | + | chr5.1:14282363-14282382 | None:intergenic | 40.0% | |
| CTTAGGTCAACAATACCTGT+AGG | - | chr5.1:14281003-14281022 | MS.gene94496:intron | 40.0% | |
| CTTTATATCCCCTAACCTAC+AGG | + | chr5.1:14281021-14281040 | None:intergenic | 40.0% | |
| GAAAGAAATACCTGCTCAAC+AGG | + | chr5.1:14284362-14284381 | None:intergenic | 40.0% | |
| GACATGATAAGGATACGACA+CGG | + | chr5.1:14281550-14281569 | None:intergenic | 40.0% | |
| GACCAAGACCATTGTCAAAA+GGG | + | chr5.1:14284281-14284300 | None:intergenic | 40.0% | |
| GACCAGGTTCTCAATAGTAT+AGG | + | chr5.1:14282347-14282366 | None:intergenic | 40.0% | |
| GATACATCCTGATATGTACC+TGG | - | chr5.1:14281221-14281240 | MS.gene94496:intron | 40.0% | |
| GGGAAGTAAATACTAGTGAG+TGG | - | chr5.1:14280933-14280952 | MS.gene94496:intron | 40.0% | |
| GTCAACAATACCTGTAGGTT+AGG | - | chr5.1:14281008-14281027 | MS.gene94496:intron | 40.0% | |
| GTTCTTTGACTAGAGGAAGA+AGG | + | chr5.1:14282801-14282820 | None:intergenic | 40.0% | |
| GTTGTAGATGGTTGCTCAAT+AGG | + | chr5.1:14284687-14284706 | None:intergenic | 40.0% | |
| TAGGGGATATAAAGATGGCT+TGG | - | chr5.1:14281027-14281046 | MS.gene94496:intron | 40.0% | |
| TATGAGATCTGTTAGCAAGC+TGG | - | chr5.1:14281986-14282005 | MS.gene94496:intron | 40.0% | |
| TCATGCATCCAAGATACATG+GGG | + | chr5.1:14282830-14282849 | None:intergenic | 40.0% | |
| TGAATGACACTCTGTGTGAA+TGG | - | chr5.1:14281125-14281144 | MS.gene94496:intron | 40.0% | |
| TGGTATATAATGTCTGGCAC+TGG | - | chr5.1:14284006-14284025 | MS.gene94496:intron | 40.0% | |
| TTCCAATGCAATGAAGGAAC+CGG | + | chr5.1:14283684-14283703 | None:intergenic | 40.0% | |
| ! | AGGATGGTAGATTTTACGGT+GGG | - | chr5.1:14282221-14282240 | MS.gene94496:intron | 40.0% |
| ! | ATCGTGTTTTCTTTGCATCC+AGG | - | chr5.1:14282035-14282054 | MS.gene94496:intron | 40.0% |
| ! | ATGGTCTTGGTCTATTCTAC+AGG | - | chr5.1:14284289-14284308 | MS.gene94496:intron | 40.0% |
| ! | ATTTTATGGTGCTCCGGATA+CGG | - | chr5.1:14281309-14281328 | MS.gene94496:intron | 40.0% |
| ! | CAAGTTTTCTCTTCAGTGGA+AGG | - | chr5.1:14283379-14283398 | MS.gene94496:intron | 40.0% |
| ! | CATACCAGAACTCTTTTGAC+AGG | + | chr5.1:14282626-14282645 | None:intergenic | 40.0% |
| ! | GCATCAAGTTTTCTCTTCAG+TGG | - | chr5.1:14283375-14283394 | MS.gene94496:intron | 40.0% |
| ! | TAGGATGGTAGATTTTACGG+TGG | - | chr5.1:14282220-14282239 | MS.gene94496:intron | 40.0% |
| ! | TGGTCTTGGTCTATTCTACA+GGG | - | chr5.1:14284290-14284309 | MS.gene94496:intron | 40.0% |
| !! | AATTCTTTGGGTTTTGGTGC+AGG | - | chr5.1:14281632-14281651 | MS.gene94496:intron | 40.0% |
| !! | CAATCGGTGTTGTTACTGTT+GGG | - | chr5.1:14280748-14280767 | MS.gene94496:intron | 40.0% |
| !! | CCTGGTCTTTTTAATTGTGG+AGG | - | chr5.1:14282360-14282379 | MS.gene94496:intron | 40.0% |
| !! | GTGATTAATTTGCCGATCTG+TGG | - | chr5.1:14280965-14280984 | MS.gene94496:intron | 40.0% |
| !! | TCAATCGGTGTTGTTACTGT+TGG | - | chr5.1:14280747-14280766 | MS.gene94496:intron | 40.0% |
| !! | TGCAATGACTAGGTTGATCA+AGG | - | chr5.1:14284612-14284631 | MS.gene94496:CDS | 40.0% |
| !!! | CATTTTGAAGTGGCATAGGA+TGG | - | chr5.1:14282205-14282224 | MS.gene94496:intron | 40.0% |
| ACCACCCTCAAACTTTGTTG+AGG | + | chr5.1:14280811-14280830 | None:intergenic | 45.0% | |
| AGACCTTTCCAAGAGACATC+AGG | - | chr5.1:14284322-14284341 | MS.gene94496:intron | 45.0% | |
| AGCCCCAGTAGGATAGTTAT+CGG | + | chr5.1:14281793-14281812 | None:intergenic | 45.0% | |
| AGGTCCGATAACTATCCTAC+TGG | - | chr5.1:14281786-14281805 | MS.gene94496:intron | 45.0% | |
| ATAGGAGTGATGTTGTGTGC+AGG | + | chr5.1:14284669-14284688 | None:intergenic | 45.0% | |
| ATCTACTGTACCTGTTGAGC+AGG | - | chr5.1:14284349-14284368 | MS.gene94496:intron | 45.0% | |
| ATGTAGGATGCAGCGAAAGA+AGG | - | chr5.1:14283156-14283175 | MS.gene94496:intron | 45.0% | |
| CAAAATCGACCCCAATGATG+CGG | - | chr5.1:14283474-14283493 | MS.gene94496:intron | 45.0% | |
| CAAGATGGGTCCAATAGTTG+TGG | - | chr5.1:14283202-14283221 | MS.gene94496:CDS | 45.0% | |
| CAAGCTCACGAGATTTCTGA+TGG | + | chr5.1:14283259-14283278 | None:intergenic | 45.0% | |
| CAAGGTAACAACTCAGACTG+TGG | - | chr5.1:14284630-14284649 | MS.gene94496:CDS | 45.0% | |
| CAATAGTTGTGGTACAGACC+AGG | - | chr5.1:14283213-14283232 | MS.gene94496:CDS | 45.0% | |
| CAGCACATATGGTCTGTCTT+GGG | + | chr5.1:14282149-14282168 | None:intergenic | 45.0% | |
| CATACACCAAGCATGTCACA+AGG | + | chr5.1:14282904-14282923 | None:intergenic | 45.0% | |
| CCAAGACCATTGTCAAAAGG+GGG | + | chr5.1:14284279-14284298 | None:intergenic | 45.0% | |
| CTGGTCTGTACCACAACTAT+TGG | + | chr5.1:14283215-14283234 | None:intergenic | 45.0% | |
| CTGTGATAGACCAGCACATA+TGG | + | chr5.1:14282160-14282179 | None:intergenic | 45.0% | |
| CTTAAAATGCAAGCCCCAGT+AGG | + | chr5.1:14281804-14281823 | None:intergenic | 45.0% | |
| GCATTTAGCAAGCCACAGAT+CGG | + | chr5.1:14280980-14280999 | None:intergenic | 45.0% | |
| GGTCCGATAACTATCCTACT+GGG | - | chr5.1:14281787-14281806 | MS.gene94496:intron | 45.0% | |
| GGTGCCTCAACAAAGTTTGA+GGG | - | chr5.1:14280804-14280823 | MS.gene94496:intron | 45.0% | |
| GTCCGATAACTATCCTACTG+GGG | - | chr5.1:14281788-14281807 | MS.gene94496:intron | 45.0% | |
| GTTGCCTGTCAAAAGAGTTC+TGG | - | chr5.1:14282619-14282638 | MS.gene94496:intron | 45.0% | |
| GTTGGCATTTAGGCTTGACT+TGG | - | chr5.1:14282113-14282132 | MS.gene94496:intron | 45.0% | |
| TACGTCAAGAAGTTGCACTC+AGG | - | chr5.1:14281766-14281785 | MS.gene94496:CDS | 45.0% | |
| TAGGAGTGATGTTGTGTGCA+GGG | + | chr5.1:14284668-14284687 | None:intergenic | 45.0% | |
| TCCAATGCAATGAAGGAACC+GGG | + | chr5.1:14283683-14283702 | None:intergenic | 45.0% | |
| TGTAGGATGCAGCGAAAGAA+GGG | - | chr5.1:14283157-14283176 | MS.gene94496:intron | 45.0% | |
| ! | ACAGTTCCCCCTTTTGACAA+TGG | - | chr5.1:14284270-14284289 | MS.gene94496:intron | 45.0% |
| ! | AGGTCACTTTGCAATGCTTG+TGG | - | chr5.1:14283515-14283534 | MS.gene94496:intron | 45.0% |
| ! | ATGGTAGATTTTACGGTGGG+AGG | - | chr5.1:14282224-14282243 | MS.gene94496:intron | 45.0% |
| ! | CAAGCATTGCAAAGTGACCT+TGG | + | chr5.1:14283515-14283534 | None:intergenic | 45.0% |
| ! | CAATGCTTGTGGGCTTTTCT+GGG | - | chr5.1:14283526-14283545 | MS.gene94496:intron | 45.0% |
| ! | CTTTTCTGGGCAAATAGGGT+AGG | - | chr5.1:14283539-14283558 | MS.gene94496:intron | 45.0% |
| ! | GGTCACTTTGCAATGCTTGT+GGG | - | chr5.1:14283516-14283535 | MS.gene94496:intron | 45.0% |
| ! | TCACGAGATTTCTGATGGAC+TGG | + | chr5.1:14283254-14283273 | None:intergenic | 45.0% |
| ! | TCCAACTCCGATGCTGTTTA+CGG | - | chr5.1:14280394-14280413 | MS.gene94496:intron | 45.0% |
| ! | TCTGTTAGCAAGCTGGTCTA+CGG | - | chr5.1:14281993-14282012 | MS.gene94496:intron | 45.0% |
| ! | TGGGCTTTTCTGGGCAAATA+GGG | - | chr5.1:14283535-14283554 | MS.gene94496:intron | 45.0% |
| ! | TGGTAGATTTTACGGTGGGA+GGG | - | chr5.1:14282225-14282244 | MS.gene94496:intron | 45.0% |
| !! | CAAAGTATCGGTTTCCGACA+CGG | - | chr5.1:14281199-14281218 | MS.gene94496:intron | 45.0% |
| !! | GGCTTGCTAAATGCTAGCTT+AGG | - | chr5.1:14280986-14281005 | MS.gene94496:intron | 45.0% |
| !! | GGTTGAGAGTGTTCGTACAT+TGG | + | chr5.1:14280262-14280281 | None:intergenic | 45.0% |
| !! | GGTTTTGGTGCAGGAATCAA+TGG | - | chr5.1:14281641-14281660 | MS.gene94496:intron | 45.0% |
| !! | TGAGAGTGTTCGTACATTGG+TGG | + | chr5.1:14280259-14280278 | None:intergenic | 45.0% |
| !!! | GGAAATAGGTTGTTTTGGGC+TGG | - | chr5.1:14284429-14284448 | MS.gene94496:intron | 45.0% |
| !!! | AATTTTTTATTAAAGTATTT+TGG | - | chr5.1:14281485-14281504 | MS.gene94496:CDS | 5.0% |
| !!! | TTTATTTTTTTTAAATAGAT+TGG | - | chr5.1:14281267-14281286 | MS.gene94496:intron | 5.0% |
| ACCTGATGCTGGTGTGAATG+CGG | - | chr5.1:14280783-14280802 | MS.gene94496:intron | 50.0% | |
| AGGGTAGGTGTTCTCTCCAA+AGG | - | chr5.1:14283554-14283573 | MS.gene94496:intron | 50.0% | |
| ATGCAATGAAGGAACCGGGA+AGG | + | chr5.1:14283679-14283698 | None:intergenic | 50.0% | |
| CAAAGTGACCTTGGACCAGA+TGG | + | chr5.1:14283506-14283525 | None:intergenic | 50.0% | |
| CCAAGACAGACCATATGTGC+TGG | - | chr5.1:14282147-14282166 | MS.gene94496:intron | 50.0% | |
| CCAGCACATATGGTCTGTCT+TGG | + | chr5.1:14282150-14282169 | None:intergenic | 50.0% | |
| CCTGCTGATAAGTCCTCGTA+GGG | - | chr5.1:14282649-14282668 | MS.gene94496:intron | 50.0% | |
| CGGTGCCTCAACAAAGTTTG+AGG | - | chr5.1:14280803-14280822 | MS.gene94496:intron | 50.0% | |
| CGTGTCGGAAACCGATACTT+TGG | + | chr5.1:14281201-14281220 | None:intergenic | 50.0% | |
| CTGCCGGAACCTAAGTAATG+AGG | + | chr5.1:14281703-14281722 | None:intergenic | 50.0% | |
| GCCTCAACAAAGTTTGAGGG+TGG | - | chr5.1:14280807-14280826 | MS.gene94496:intron | 50.0% | |
| GGATGTGAACAACCTGATGC+TGG | - | chr5.1:14280772-14280791 | MS.gene94496:intron | 50.0% | |
| TACAGACCAGGATTCTAGCC+AGG | - | chr5.1:14283225-14283244 | MS.gene94496:CDS | 50.0% | |
| TACTTAGGTTCCGGCAGAAG+AGG | - | chr5.1:14281706-14281725 | MS.gene94496:CDS | 50.0% | |
| TCAGTACGAAACGCACGGTA+TGG | - | chr5.1:14280366-14280385 | MS.gene94496:intron | 50.0% | |
| TCCCGGTTCCTTCATTGCAT+TGG | - | chr5.1:14283679-14283698 | MS.gene94496:intron | 50.0% | |
| TCCTGCTGATAAGTCCTCGT+AGG | - | chr5.1:14282648-14282667 | MS.gene94496:intron | 50.0% | |
| TGACTCTGTTACGCCTGCTA+AGG | - | chr5.1:14280507-14280526 | MS.gene94496:intron | 50.0% | |
| TGATAAGTCCTCGTAGGGCA+CGG | - | chr5.1:14282654-14282673 | MS.gene94496:intron | 50.0% | |
| TGCAATGAAGGAACCGGGAA+GGG | + | chr5.1:14283678-14283697 | None:intergenic | 50.0% | |
| ! | CCCCCTTTTGACAATGGTCT+TGG | - | chr5.1:14284276-14284295 | MS.gene94496:intron | 50.0% |
| ! | CTGTTAGCAAGCTGGTCTAC+GGG | - | chr5.1:14281994-14282013 | MS.gene94496:intron | 50.0% |
| ! | GCAATGCTTGTGGGCTTTTC+TGG | - | chr5.1:14283525-14283544 | MS.gene94496:intron | 50.0% |
| ! | GTGGGCTTTTCTGGGCAAAT+AGG | - | chr5.1:14283534-14283553 | MS.gene94496:intron | 50.0% |
| ! | TCCGATGCTGTTTACGGCAA+CGG | - | chr5.1:14280400-14280419 | MS.gene94496:intron | 50.0% |
| !! | GCCCTTTTGATTGGTGTCCT+TGG | - | chr5.1:14282460-14282479 | MS.gene94496:intron | 50.0% |
| !! | TCGGTGTTGTTACTGTTGGG+TGG | - | chr5.1:14280751-14280770 | MS.gene94496:intron | 50.0% |
| !! | TTGATGTTGAGCGTCGATGC+CGG | + | chr5.1:14280344-14280363 | None:intergenic | 50.0% |
| !! | TTTCTGATGGACTGGCATCC+TGG | + | chr5.1:14283246-14283265 | None:intergenic | 50.0% |
| !! | TTTTTAGTCCGTGCCCTACG+AGG | + | chr5.1:14282665-14282684 | None:intergenic | 50.0% |
| ACACTCATGCATGCCCTTCC+CGG | - | chr5.1:14283662-14283681 | MS.gene94496:intron | 55.0% | |
| ACCACAGTACCAATCACCGC+CGG | - | chr5.1:14280289-14280308 | MS.gene94496:CDS | 55.0% | |
| ACCGCATTCACACCAGCATC+AGG | + | chr5.1:14280787-14280806 | None:intergenic | 55.0% | |
| ACGACACGGATACGGCGATA+TGG | + | chr5.1:14281536-14281555 | None:intergenic | 55.0% | |
| CCCTACGAGGACTTATCAGC+AGG | + | chr5.1:14282652-14282671 | None:intergenic | 55.0% | |
| CTATCATGGGCAGCCGTATC+CGG | + | chr5.1:14281325-14281344 | None:intergenic | 55.0% | |
| GCCGTTGCCGTAAACAGCAT+CGG | + | chr5.1:14280404-14280423 | None:intergenic | 55.0% | |
| GGAGTGAGAGAGTTCAGGAG+TGG | - | chr5.1:14281048-14281067 | MS.gene94496:intron | 55.0% | |
| GGCTTGGAGTGAGAGAGTTC+AGG | - | chr5.1:14281043-14281062 | MS.gene94496:intron | 55.0% | |
| TGGCATCCTGGCTAGAATCC+TGG | + | chr5.1:14283234-14283253 | None:intergenic | 55.0% | |
| ! | CAGCTTACGCTGTCGTTTCG+TGG | - | chr5.1:14280469-14280488 | MS.gene94496:intron | 55.0% |
| ! | GATGCTGTTTACGGCAACGG+CGG | - | chr5.1:14280403-14280422 | MS.gene94496:intron | 55.0% |
| ! | GCCGTAAACAGCATCGGAGT+TGG | + | chr5.1:14280398-14280417 | None:intergenic | 55.0% |
| ATGGCCCTCGCCGCATCATT+GGG | + | chr5.1:14283487-14283506 | None:intergenic | 60.0% | |
| GGAACCGTCATCGCTTTCGC+CGG | + | chr5.1:14280311-14280330 | None:intergenic | 60.0% | |
| ! | GGCGAAAGCGATGACGGTTC+CGG | - | chr5.1:14280310-14280329 | MS.gene94496:CDS | 60.0% |
| ACCGCCGGCGAAAGCGATGA+CGG | - | chr5.1:14280304-14280323 | MS.gene94496:CDS | 65.0% | |
| ACCGTCATCGCTTTCGCCGG+CGG | + | chr5.1:14280308-14280327 | None:intergenic | 65.0% | |
| ATGATGCGGCGAGGGCCATC+TGG | - | chr5.1:14283488-14283507 | MS.gene94496:intron | 65.0% | |
| CGACCCCAATGATGCGGCGA+GGG | - | chr5.1:14283480-14283499 | MS.gene94496:intron | 65.0% | |
| GATGGCCCTCGCCGCATCAT+TGG | + | chr5.1:14283488-14283507 | None:intergenic | 65.0% | |
| GCCGGCGGTGATTGGTACTG+TGG | + | chr5.1:14280293-14280312 | None:intergenic | 65.0% | |
| TCGACCCCAATGATGCGGCG+AGG | - | chr5.1:14283479-14283498 | MS.gene94496:intron | 65.0% | |
| TCGCTTTCGCCGGCGGTGAT+TGG | + | chr5.1:14280301-14280320 | None:intergenic | 65.0% | |
| TGGCCCTCGCCGCATCATTG+GGG | + | chr5.1:14283486-14283505 | None:intergenic | 65.0% | |
| !! | TTGAGCGTCGATGCCGGCGT+CGG | + | chr5.1:14280338-14280357 | None:intergenic | 65.0% |
| GGCGAGGGCCATCTGGTCCA+AGG | - | chr5.1:14283495-14283514 | MS.gene94496:intron | 70.0% | |
| !! | TGAGCGTCGATGCCGGCGTC+GGG | + | chr5.1:14280337-14280356 | None:intergenic | 70.0% |
| GACGGTTCCGGTCCCGACGC+CGG | - | chr5.1:14280322-14280341 | MS.gene94496:CDS | 75.0% | |
| ! | GTCGATGCCGGCGTCGGGAC+CGG | + | chr5.1:14280332-14280351 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 14280250 | 14284716 | 14280250 | ID=MS.gene94496 |
| chr5.1 | mRNA | 14280250 | 14284716 | 14280250 | ID=MS.gene94496.t1;Parent=MS.gene94496 |
| chr5.1 | exon | 14284438 | 14284716 | 14284438 | ID=MS.gene94496.t1.exon1;Parent=MS.gene94496.t1 |
| chr5.1 | CDS | 14284438 | 14284716 | 14284438 | ID=cds.MS.gene94496.t1;Parent=MS.gene94496.t1 |
| chr5.1 | exon | 14284138 | 14284221 | 14284138 | ID=MS.gene94496.t1.exon2;Parent=MS.gene94496.t1 |
| chr5.1 | CDS | 14284138 | 14284221 | 14284138 | ID=cds.MS.gene94496.t1;Parent=MS.gene94496.t1 |
| chr5.1 | exon | 14283179 | 14283312 | 14283179 | ID=MS.gene94496.t1.exon3;Parent=MS.gene94496.t1 |
| chr5.1 | CDS | 14283179 | 14283312 | 14283179 | ID=cds.MS.gene94496.t1;Parent=MS.gene94496.t1 |
| chr5.1 | exon | 14281697 | 14281804 | 14281697 | ID=MS.gene94496.t1.exon4;Parent=MS.gene94496.t1 |
| chr5.1 | CDS | 14281697 | 14281804 | 14281697 | ID=cds.MS.gene94496.t1;Parent=MS.gene94496.t1 |
| chr5.1 | exon | 14281410 | 14281515 | 14281410 | ID=MS.gene94496.t1.exon5;Parent=MS.gene94496.t1 |
| chr5.1 | CDS | 14281410 | 14281515 | 14281410 | ID=cds.MS.gene94496.t1;Parent=MS.gene94496.t1 |
| chr5.1 | exon | 14280596 | 14280655 | 14280596 | ID=MS.gene94496.t1.exon6;Parent=MS.gene94496.t1 |
| chr5.1 | CDS | 14280596 | 14280655 | 14280596 | ID=cds.MS.gene94496.t1;Parent=MS.gene94496.t1 |
| chr5.1 | exon | 14280250 | 14280342 | 14280250 | ID=MS.gene94496.t1.exon7;Parent=MS.gene94496.t1 |
| chr5.1 | CDS | 14280250 | 14280342 | 14280250 | ID=cds.MS.gene94496.t1;Parent=MS.gene94496.t1 |
| Gene Sequence |
| Protein sequence |
