AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene94544

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94544.t1 MTR_8g106960 71.390 374 54 5 7 328 100 472 0.0 523
MS.gene94544.t1 MTR_8g106960 71.390 374 54 5 7 328 100 472 0.0 522
MS.gene94544.t1 MTR_6g079470 67.200 375 70 5 6 328 70 443 1.75e-169 483
MS.gene94544.t1 MTR_2g021330 61.497 374 91 5 7 328 7 379 4.64e-163 461
MS.gene94544.t1 MTR_2g021330 61.497 374 91 5 7 328 7 379 5.94e-161 461
MS.gene94544.t1 MTR_4g117490 61.497 374 91 5 7 328 7 379 5.84e-160 456
MS.gene94544.t1 MTR_4g117490 61.497 374 91 5 7 328 7 379 1.10e-159 458
MS.gene94544.t1 MTR_3g089510 60.160 374 96 5 7 328 7 379 1.61e-148 431
MS.gene94544.t1 MTR_2g072840 60.267 375 96 5 6 328 6 379 2.24e-148 427
MS.gene94544.t1 MTR_3g089510 60.763 367 91 5 14 328 2 367 4.68e-147 427
MS.gene94544.t1 MTR_2g072840 60.267 375 96 5 6 328 6 379 5.10e-147 427
MS.gene94544.t1 MTR_8g461040 59.030 371 99 5 10 328 11 380 8.59e-144 418
MS.gene94544.t1 MTR_5g091680 57.995 369 97 6 12 328 9 371 5.66e-141 407
MS.gene94544.t1 MTR_5g091680 57.067 375 103 6 6 328 1 369 9.79e-141 407
MS.gene94544.t1 MTR_5g091680 57.995 369 97 6 12 328 9 371 1.04e-140 407
MS.gene94544.t1 MTR_5g091680 57.995 369 97 6 12 328 9 371 1.15e-140 407
MS.gene94544.t1 MTR_8g106970 60.857 350 50 8 4 327 1 289 3.65e-127 367
MS.gene94544.t1 MTR_2g072840 58.131 289 69 4 92 328 1 289 7.89e-103 311
MS.gene94544.t1 MTR_8g098845 38.788 330 152 6 31 313 58 384 1.09e-74 235
MS.gene94544.t1 MTR_4g087620 38.838 327 151 6 31 311 61 384 1.68e-74 234
MS.gene94544.t1 MTR_4g061320 39.157 332 151 7 31 314 46 374 8.07e-74 232
MS.gene94544.t1 MTR_3g112210 38.166 338 155 7 23 311 30 362 2.44e-73 231
MS.gene94544.t1 MTR_5g010030 39.450 327 148 6 31 310 47 370 1.57e-72 229
MS.gene94544.t1 MTR_7g078690 37.195 328 154 7 31 310 44 367 2.60e-70 223
MS.gene94544.t1 MTR_8g028720 38.110 328 151 7 31 310 43 366 1.06e-69 222
MS.gene94544.t1 MTR_3g460950 37.725 334 158 8 23 309 30 360 7.34e-69 219
MS.gene94544.t1 MTR_3g060330 37.725 334 158 8 23 309 30 360 7.34e-69 219
MS.gene94544.t1 MTR_8g086000 35.135 333 162 7 29 312 36 363 1.80e-65 211
MS.gene94544.t1 MTR_8g086000 35.135 333 162 7 29 312 79 406 5.73e-65 211
MS.gene94544.t1 MTR_3g460980 37.462 331 157 7 13 311 20 332 6.03e-64 206
MS.gene94544.t1 MTR_4g061130 37.224 317 156 6 31 311 45 354 1.02e-63 206
MS.gene94544.t1 MTR_3g060390 34.743 331 162 6 13 311 20 328 1.92e-59 194
MS.gene94544.t1 MTR_4g087620 41.981 212 79 4 31 199 61 271 4.03e-48 163
MS.gene94544.t1 MTR_8g086010 33.670 297 151 10 29 311 152 416 3.12e-45 159
MS.gene94544.t1 MTR_3g060350 33.708 267 131 4 24 268 36 278 1.80e-41 145
MS.gene94544.t1 MTR_4g094430 32.313 294 144 7 24 268 3 290 1.53e-37 136
MS.gene94544.t1 MTR_2g032060 31.973 294 145 7 24 268 3 290 1.31e-36 133
MS.gene94544.t1 MTR_3g040520 29.799 349 178 12 27 311 25 370 3.90e-35 134
MS.gene94544.t1 MTR_3g040810 29.799 349 178 12 27 311 23 368 5.75e-35 133
MS.gene94544.t1 MTR_5g026960 30.584 291 147 8 24 267 3 285 7.56e-35 132
MS.gene94544.t1 MTR_3g054080 30.351 313 161 10 22 284 11 316 1.96e-34 130
MS.gene94544.t1 MTR_6g080470 32.534 292 141 9 22 265 11 294 1.59e-33 128
MS.gene94544.t1 MTR_8g071230 30.104 289 147 8 24 265 3 283 2.04e-33 128
MS.gene94544.t1 MTR_8g461270 30.847 295 148 7 26 268 48 338 1.39e-32 124
MS.gene94544.t1 MTR_8g012450 31.525 295 136 10 25 266 4 285 4.56e-32 124
MS.gene94544.t1 MTR_4g007750 31.803 305 145 10 26 268 3 306 5.49e-32 121
MS.gene94544.t1 MTR_4g103810 31.229 301 150 6 22 267 105 403 7.49e-32 123
MS.gene94544.t1 MTR_1g075610 29.333 300 158 7 22 268 13 311 9.09e-32 121
MS.gene94544.t1 MTR_8g012450 31.525 295 136 10 25 266 4 285 1.30e-31 123
MS.gene94544.t1 MTR_4g103810 31.333 300 149 6 23 267 216 513 1.96e-31 124
MS.gene94544.t1 MTR_3g085650 32.082 293 140 6 31 268 422 710 4.45e-31 124
MS.gene94544.t1 MTR_3g085650 32.082 293 140 6 31 268 422 710 4.46e-31 124
MS.gene94544.t1 MTR_3g085650 32.082 293 140 6 31 268 422 710 4.73e-31 124
MS.gene94544.t1 MTR_8g080190 32.082 293 140 6 31 268 391 679 3.03e-30 121
MS.gene94544.t1 MTR_8g432510 29.429 333 173 12 21 299 135 459 2.28e-29 117
MS.gene94544.t1 MTR_1g086370 30.233 301 152 9 21 270 38 331 6.83e-29 114
MS.gene94544.t1 MTR_1g086370 30.233 301 152 9 21 270 71 364 1.59e-28 114
MS.gene94544.t1 MTR_4g109090 28.659 328 165 13 27 293 105 424 1.65e-28 116
MS.gene94544.t1 MTR_7g110060 29.568 301 154 8 21 270 71 364 1.71e-28 114
MS.gene94544.t1 MTR_7g076030 28.274 336 176 12 20 298 26 353 2.11e-28 113
MS.gene94544.t1 MTR_3g085650 32.014 278 130 6 31 253 422 695 7.67e-28 114
MS.gene94544.t1 MTR_2g020210 30.793 328 155 13 27 292 102 419 8.78e-28 113
MS.gene94544.t1 MTR_2g083940 28.788 330 175 11 25 301 34 356 9.45e-28 111
MS.gene94544.t1 MTR_7g114300 30.375 293 142 11 27 265 107 391 9.99e-28 113
MS.gene94544.t1 MTR_7g114300 29.866 298 150 12 27 271 107 398 1.17e-27 112
MS.gene94544.t1 MTR_2g016490 28.743 334 178 10 21 301 36 362 1.46e-27 111
MS.gene94544.t1 MTR_7g076030 28.274 336 176 12 20 298 133 460 1.84e-27 112
MS.gene94544.t1 MTR_2g083940 28.788 330 175 11 25 301 88 410 2.21e-27 111
MS.gene94544.t1 MTR_7g114300 29.231 325 162 12 27 291 107 423 2.26e-27 112
MS.gene94544.t1 MTR_1g084760 28.904 301 156 8 21 270 71 364 2.39e-27 111
MS.gene94544.t1 MTR_6g013030 28.571 343 167 12 21 299 106 434 3.12e-27 112
MS.gene94544.t1 MTR_7g114300 30.070 286 142 11 27 260 107 386 3.51e-27 110
MS.gene94544.t1 MTR_3g098760 29.508 305 156 11 27 279 97 394 1.08e-26 110
MS.gene94544.t1 MTR_2g005620 28.308 325 173 10 21 293 86 402 1.53e-26 108
MS.gene94544.t1 MTR_4g118780 29.063 320 169 11 31 300 110 421 2.61e-26 109
MS.gene94544.t1 MTR_5g008860 28.328 293 148 10 27 265 140 424 1.12e-25 107
MS.gene94544.t1 MTR_7g110060 29.537 281 140 8 21 250 71 344 1.31e-25 105
MS.gene94544.t1 MTR_7g011800 29.508 305 132 13 27 266 120 406 1.33e-25 107
MS.gene94544.t1 MTR_1g081870 29.032 310 156 11 27 278 122 425 3.70e-25 106
MS.gene94544.t1 MTR_8g099770 29.110 292 147 10 27 265 90 374 4.25e-25 105
MS.gene94544.t1 MTR_8g080190 34.404 218 94 5 31 203 391 604 8.86e-24 102
MS.gene94544.t1 MTR_4g109090 27.660 282 141 9 69 293 1 276 9.19e-24 102
MS.gene94544.t1 MTR_4g078290 29.010 293 136 12 31 265 135 413 7.70e-23 99.8
MS.gene94544.t1 MTR_4g078290 29.010 293 136 12 31 265 135 413 7.71e-23 99.8
MS.gene94544.t1 MTR_2g090405 26.059 307 154 12 31 279 147 438 1.82e-22 98.6
MS.gene94544.t1 MTR_1g086370 36.257 171 91 5 118 270 75 245 1.82e-22 95.5
MS.gene94544.t1 MTR_1g098300 28.866 291 155 7 22 265 123 408 5.93e-22 97.1
MS.gene94544.t1 MTR_8g092290 29.167 240 108 9 31 222 147 372 3.18e-21 94.7
MS.gene94544.t1 MTR_4g061330 38.710 155 84 5 161 314 22 166 3.42e-21 89.0
MS.gene94544.t1 MTR_2g085200 27.044 318 169 12 27 290 134 442 3.48e-21 94.7
MS.gene94544.t1 MTR_3g460960 41.912 136 69 3 24 156 36 164 2.07e-20 89.7
MS.gene94544.t1 MTR_3g096960 27.726 321 144 13 24 265 17 328 2.11e-20 92.0
MS.gene94544.t1 MTR_4g095670 23.179 302 185 10 17 272 112 412 2.70e-18 85.5
MS.gene94544.t1 MTR_8g070930 29.268 246 114 8 21 214 135 372 1.53e-17 84.0
MS.gene94544.t1 MTR_5g015830 24.172 302 182 11 17 272 107 407 9.20e-17 80.9
MS.gene94544.t1 MTR_6g074905 27.817 284 151 9 22 265 895 1164 1.90e-16 80.9
MS.gene94544.t1 MTR_1g048630 27.016 248 131 9 20 224 2 242 2.04e-16 80.9
MS.gene94544.t1 MTR_3g466400 30.189 212 95 7 24 188 13 218 1.13e-15 77.8
MS.gene94544.t1 MTR_4g095400 24.252 301 169 12 17 265 81 374 4.43e-15 75.9
MS.gene94544.t1 MTR_1g080020 26.071 280 146 7 23 264 7 263 6.85e-15 73.9
MS.gene94544.t1 MTR_8g103240 31.206 141 86 3 160 296 304 437 7.53e-15 75.5
MS.gene94544.t1 MTR_8g079790 24.667 300 139 12 22 265 122 390 2.35e-14 74.3
MS.gene94544.t1 MTR_6g087920 33.945 109 68 1 161 265 292 400 7.88e-14 72.0
MS.gene94544.t1 MTR_4g094415 28.631 241 120 12 30 224 168 402 4.71e-13 70.1
MS.gene94544.t1 MTR_5g059880 27.160 243 130 11 25 224 192 430 9.67e-13 68.9
MS.gene94544.t1 MTR_5g059940 26.141 241 135 9 25 224 125 363 1.04e-12 68.6
MS.gene94544.t1 MTR_6g074870 28.910 211 122 8 22 214 126 326 2.20e-12 67.4
MS.gene94544.t1 MTR_2g016280 29.282 181 84 7 24 180 30 190 3.94e-12 67.4
MS.gene94544.t1 MTR_5g060350 26.141 241 135 9 25 224 321 559 7.23e-12 66.6
MS.gene94544.t1 MTR_5g059910 25.424 236 135 7 29 224 135 369 1.59e-11 65.1
MS.gene94544.t1 MTR_3g073250 29.897 194 93 9 71 224 318 508 2.87e-11 64.7
MS.gene94544.t1 MTR_4g075410 28.000 200 104 5 23 182 18 217 4.77e-11 64.3
MS.gene94544.t1 MTR_4g075410 28.000 200 104 5 23 182 18 217 4.92e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94544.t1 AT1G73670 64.171 374 81 5 7 328 72 444 6.68e-167 477
MS.gene94544.t1 AT3G18040 65.241 374 77 5 7 328 5 377 1.39e-163 466
MS.gene94544.t1 AT3G18040 65.854 369 73 5 12 328 5 372 1.83e-163 466
MS.gene94544.t1 AT3G18040 65.241 374 77 5 7 328 114 486 9.14e-163 468
MS.gene94544.t1 AT3G18040 65.241 374 77 5 7 328 114 486 4.60e-162 467
MS.gene94544.t1 AT1G18150 65.312 369 75 5 12 328 91 458 2.79e-158 455
MS.gene94544.t1 AT1G18150 65.312 369 75 5 12 328 91 458 2.79e-158 455
MS.gene94544.t1 AT1G18150 65.312 369 75 5 12 328 91 458 2.79e-158 455
MS.gene94544.t1 AT5G19010 59.893 374 97 5 7 328 7 379 1.21e-157 453
MS.gene94544.t1 AT2G01450 59.838 371 94 6 12 328 3 372 5.85e-154 441
MS.gene94544.t1 AT2G01450 59.838 371 94 6 12 328 3 372 5.85e-154 441
MS.gene94544.t1 AT2G01450 59.838 371 94 6 12 328 3 372 5.85e-154 441
MS.gene94544.t1 AT2G01450 59.838 371 94 6 12 328 3 372 5.85e-154 441
MS.gene94544.t1 AT2G42880 59.893 374 97 5 7 328 7 379 1.74e-150 431
MS.gene94544.t1 AT2G42880 59.893 374 97 5 7 328 7 379 3.43e-149 433
MS.gene94544.t1 AT3G14720 60.428 374 94 6 7 328 7 378 3.35e-148 424
MS.gene94544.t1 AT3G14720 60.428 374 94 6 7 328 7 378 3.35e-148 424
MS.gene94544.t1 AT1G53510 59.467 375 99 5 6 328 6 379 3.97e-146 425
MS.gene94544.t1 AT3G14720 60.428 374 94 6 7 328 7 378 5.45e-146 424
MS.gene94544.t1 AT3G18040 63.668 289 53 4 92 328 1 289 5.90e-116 342
MS.gene94544.t1 AT2G43790 41.159 328 142 7 31 311 69 392 4.37e-75 236
MS.gene94544.t1 AT1G07880 39.385 325 147 6 31 308 39 360 1.43e-73 231
MS.gene94544.t1 AT3G45640 38.532 327 151 6 31 310 44 367 1.66e-73 231
MS.gene94544.t1 AT4G36450 38.507 335 156 7 23 311 30 360 3.10e-73 230
MS.gene94544.t1 AT3G59790 39.755 327 148 6 31 311 66 389 9.69e-73 230
MS.gene94544.t1 AT2G18170 38.348 339 153 8 23 311 30 362 2.53e-72 228
MS.gene94544.t1 AT4G01370 37.500 328 155 6 31 311 49 373 7.99e-72 227
MS.gene94544.t1 AT1G10210 37.574 338 157 7 23 311 30 362 8.84e-72 227
MS.gene94544.t1 AT1G10210 37.574 338 157 7 23 311 30 362 8.84e-72 227
MS.gene94544.t1 AT1G10210 37.574 338 157 7 23 311 30 362 8.84e-72 227
MS.gene94544.t1 AT4G11330 38.226 327 152 6 31 310 49 372 2.11e-71 226
MS.gene94544.t1 AT1G59580 37.574 338 159 7 23 311 30 364 3.35e-69 221
MS.gene94544.t1 AT1G59580 37.574 338 159 7 23 311 30 364 3.35e-69 221
MS.gene94544.t1 AT1G01560 37.003 327 156 6 31 310 46 369 8.61e-68 217
MS.gene94544.t1 AT2G46070 35.159 347 170 7 16 310 27 370 4.84e-67 215
MS.gene94544.t1 AT2G46070 35.159 347 170 7 16 310 61 404 7.67e-67 215
MS.gene94544.t1 AT2G46070 36.332 289 131 6 16 252 27 314 7.92e-57 187
MS.gene94544.t1 AT1G01560 37.546 269 120 5 31 252 46 313 9.20e-55 182
MS.gene94544.t1 AT1G07880 40.553 217 85 4 31 204 39 254 7.62e-47 159
MS.gene94544.t1 AT1G01560 40.566 212 82 4 31 199 46 256 4.95e-45 155
MS.gene94544.t1 AT1G01560 40.566 212 82 4 31 199 46 256 4.95e-45 155
MS.gene94544.t1 AT3G48750 32.660 297 145 7 24 271 3 293 8.62e-40 142
MS.gene94544.t1 AT4G19110 32.343 303 148 9 24 279 3 295 5.74e-38 140
MS.gene94544.t1 AT4G19110 32.343 303 148 9 24 279 3 295 5.78e-38 140
MS.gene94544.t1 AT5G10270 30.704 355 166 12 27 310 26 371 5.56e-35 133
MS.gene94544.t1 AT1G20930 31.864 295 147 8 27 268 16 309 1.05e-34 129
MS.gene94544.t1 AT1G18040 32.534 292 141 10 22 265 9 292 4.85e-34 129
MS.gene94544.t1 AT4G13020 31.615 291 140 10 24 265 3 283 5.27e-34 128
MS.gene94544.t1 AT5G64960 29.573 328 165 10 27 291 26 350 6.38e-34 130
MS.gene94544.t1 AT4G13020 31.615 291 140 10 24 265 3 283 6.41e-34 129
MS.gene94544.t1 AT4G13020 31.615 291 140 10 24 265 3 283 7.75e-34 128
MS.gene94544.t1 AT4G13020 31.724 290 141 9 24 265 3 283 1.11e-33 129
MS.gene94544.t1 AT4G13020 31.615 291 140 10 24 265 11 291 1.14e-33 129
MS.gene94544.t1 AT4G13020 31.615 291 140 10 24 265 11 291 1.16e-33 129
MS.gene94544.t1 AT1G76540 29.831 295 153 7 27 268 14 307 1.55e-33 125
MS.gene94544.t1 AT1G66750 31.834 289 143 10 24 265 12 293 2.25e-33 126
MS.gene94544.t1 AT5G45430 30.592 304 152 11 24 279 3 295 4.38e-33 128
MS.gene94544.t1 AT5G45430 30.592 304 152 11 24 279 3 295 5.08e-33 128
MS.gene94544.t1 AT1G67580 31.741 293 141 6 31 268 412 700 3.34e-32 127
MS.gene94544.t1 AT1G67580 31.741 293 141 6 31 268 412 700 3.34e-32 127
MS.gene94544.t1 AT2G38620 30.293 307 147 10 26 268 3 306 5.35e-32 122
MS.gene94544.t1 AT5G63370 32.051 312 146 13 19 268 155 462 6.71e-32 124
MS.gene94544.t1 AT5G63370 32.051 312 146 13 19 268 155 462 6.71e-32 124
MS.gene94544.t1 AT3G54180 30.033 303 151 9 26 268 3 304 1.03e-31 121
MS.gene94544.t1 AT4G13020 30.769 299 141 11 24 265 3 292 1.16e-31 122
MS.gene94544.t1 AT1G73690 31.507 292 144 9 22 265 8 291 1.91e-31 122
MS.gene94544.t1 AT4G13020 30.769 299 141 11 24 265 3 292 1.96e-31 122
MS.gene94544.t1 AT5G63370 32.051 312 146 13 19 268 289 596 2.31e-31 124
MS.gene94544.t1 AT5G63370 32.051 312 146 13 19 268 289 596 2.31e-31 124
MS.gene94544.t1 AT5G63370 32.051 312 146 13 19 268 289 596 2.31e-31 124
MS.gene94544.t1 AT5G63370 32.051 312 146 13 19 268 289 596 2.31e-31 124
MS.gene94544.t1 AT5G63370 32.051 312 146 13 19 268 289 596 2.31e-31 124
MS.gene94544.t1 AT3G61160 30.060 336 174 12 25 308 109 435 2.01e-30 120
MS.gene94544.t1 AT3G61160 29.762 336 175 12 25 308 102 428 2.07e-30 119
MS.gene94544.t1 AT3G61160 30.847 295 146 9 25 268 102 389 5.18e-30 118
MS.gene94544.t1 AT3G01085 29.938 324 171 9 6 279 96 413 3.45e-29 118
MS.gene94544.t1 AT3G01085 29.938 324 171 9 6 279 96 413 3.81e-29 118
MS.gene94544.t1 AT3G01085 29.938 324 171 9 6 279 96 413 3.81e-29 118
MS.gene94544.t1 AT4G00720 29.538 325 169 11 21 293 134 450 4.77e-29 116
MS.gene94544.t1 AT5G14640 29.900 301 153 9 21 270 70 363 1.52e-28 114
MS.gene94544.t1 AT5G14640 29.900 301 153 9 21 270 70 363 1.52e-28 114
MS.gene94544.t1 AT2G30980 28.144 334 180 9 21 301 68 394 3.23e-28 113
MS.gene94544.t1 AT4G22940 28.289 304 147 8 20 265 98 388 9.52e-28 112
MS.gene94544.t1 AT1G06390 28.443 334 179 11 21 301 66 392 1.08e-27 112
MS.gene94544.t1 AT1G06390 28.443 334 179 11 21 301 66 392 1.08e-27 112
MS.gene94544.t1 AT4G22940 28.289 304 147 8 20 265 98 388 1.60e-27 113
MS.gene94544.t1 AT4G18710 28.743 334 178 10 21 301 36 362 1.66e-27 111
MS.gene94544.t1 AT1G57870 28.615 325 172 10 21 293 78 394 2.34e-27 111
MS.gene94544.t1 AT1G57870 28.615 325 172 10 21 293 78 394 2.34e-27 111
MS.gene94544.t1 AT1G57870 28.615 325 172 10 21 293 78 394 2.34e-27 111
MS.gene94544.t1 AT1G57870 28.615 325 172 10 21 293 78 394 2.65e-27 111
MS.gene94544.t1 AT5G64960 28.322 286 141 9 67 291 15 297 3.20e-27 111
MS.gene94544.t1 AT4G10010 28.720 289 152 7 27 265 156 440 3.48e-27 112
MS.gene94544.t1 AT3G05840 28.904 301 156 8 21 270 69 362 3.54e-27 110
MS.gene94544.t1 AT3G05840 28.904 301 156 8 21 270 69 362 3.54e-27 110
MS.gene94544.t1 AT3G61160 30.070 286 141 10 25 258 102 380 3.57e-27 110
MS.gene94544.t1 AT5G26751 28.904 301 156 8 21 270 65 358 4.74e-27 110
MS.gene94544.t1 AT5G63370 32.203 236 106 9 19 203 155 387 8.07e-27 109
MS.gene94544.t1 AT1G03740 28.431 306 157 8 14 265 200 497 1.25e-26 110
MS.gene94544.t1 AT1G03740 28.431 306 157 8 14 265 200 497 1.37e-26 110
MS.gene94544.t1 AT5G63370 32.203 236 106 9 19 203 289 521 2.00e-26 109
MS.gene94544.t1 AT5G63370 32.203 236 106 9 19 203 289 521 2.00e-26 109
MS.gene94544.t1 AT4G19110 30.894 246 115 8 81 279 2 239 3.64e-26 107
MS.gene94544.t1 AT1G09840 29.231 325 170 11 21 293 79 395 4.69e-26 107
MS.gene94544.t1 AT1G09840 29.231 325 170 11 21 293 79 395 4.69e-26 107
MS.gene94544.t1 AT1G09840 29.231 325 170 11 21 293 79 395 4.69e-26 107
MS.gene94544.t1 AT1G09840 29.231 325 170 11 21 293 79 395 4.69e-26 107
MS.gene94544.t1 AT1G09840 29.231 325 170 11 21 293 79 395 4.69e-26 107
MS.gene94544.t1 AT1G09840 29.231 325 170 11 21 293 79 395 4.69e-26 107
MS.gene94544.t1 AT1G09840 29.231 325 170 11 21 293 79 395 4.69e-26 107
MS.gene94544.t1 AT1G09840 29.231 325 170 11 21 293 79 395 4.69e-26 107
MS.gene94544.t1 AT1G09840 29.231 325 170 11 21 293 79 395 4.69e-26 107
MS.gene94544.t1 AT1G09840 29.231 325 170 11 21 293 79 395 4.69e-26 107
MS.gene94544.t1 AT5G50860 28.231 294 157 7 21 265 110 398 6.96e-26 107
MS.gene94544.t1 AT1G54610 29.321 324 163 12 27 291 118 434 8.91e-26 108
MS.gene94544.t1 AT1G54610 29.321 324 163 12 27 291 118 434 8.91e-26 108
MS.gene94544.t1 AT1G54610 29.321 324 163 12 27 291 118 434 8.91e-26 108
MS.gene94544.t1 AT5G50860 28.378 296 154 10 21 265 110 398 1.24e-25 107
MS.gene94544.t1 AT5G39420 29.010 293 146 11 27 265 105 389 3.49e-25 106
MS.gene94544.t1 AT3G61160 31.489 235 105 7 25 210 102 329 5.05e-25 103
MS.gene94544.t1 AT3G61160 31.489 235 105 7 25 210 109 336 6.71e-25 103
MS.gene94544.t1 AT2G38620 30.075 266 139 10 26 268 3 244 7.09e-25 101
MS.gene94544.t1 AT1G74330 27.515 338 172 14 27 300 121 449 2.17e-24 104
MS.gene94544.t1 AT1G74330 27.515 338 172 14 27 300 121 449 2.34e-24 103
MS.gene94544.t1 AT4G01595 59.140 93 34 1 161 249 20 112 2.73e-24 96.7
MS.gene94544.t1 AT1G74330 27.515 338 172 14 27 300 121 449 2.78e-24 103
MS.gene94544.t1 AT3G05050 31.140 228 105 6 27 206 138 361 4.11e-24 103
MS.gene94544.t1 AT3G05050 31.140 228 105 6 27 206 138 361 4.11e-24 103
MS.gene94544.t1 AT3G05050 31.140 228 105 6 27 206 138 361 4.11e-24 103
MS.gene94544.t1 AT1G71530 27.336 289 156 7 27 265 147 431 4.59e-24 102
MS.gene94544.t1 AT4G18710 29.958 237 110 6 21 208 30 259 5.46e-24 99.4
MS.gene94544.t1 AT1G71530 25.352 355 200 9 27 320 147 497 6.41e-24 102
MS.gene94544.t1 AT1G18670 28.231 294 150 10 27 265 131 418 1.34e-23 102
MS.gene94544.t1 AT1G18670 28.231 294 150 10 27 265 131 418 1.63e-23 101
MS.gene94544.t1 AT1G18670 28.231 294 150 10 27 265 131 418 1.85e-23 101
MS.gene94544.t1 AT1G71530 27.465 284 152 7 27 260 147 426 2.24e-23 100
MS.gene94544.t1 AT4G10010 27.757 263 138 6 51 265 2 260 3.04e-23 100
MS.gene94544.t1 AT5G44290 26.403 303 151 8 21 265 133 421 6.87e-23 99.4
MS.gene94544.t1 AT5G44290 26.403 303 151 8 21 265 133 421 1.04e-22 99.4
MS.gene94544.t1 AT5G44290 26.403 303 151 8 21 265 133 421 1.36e-22 99.0
MS.gene94544.t1 AT5G44290 26.403 303 151 8 21 265 133 421 1.36e-22 99.0
MS.gene94544.t1 AT5G44290 26.403 303 151 8 21 265 133 421 1.36e-22 99.0
MS.gene94544.t1 AT5G44290 26.403 303 151 8 21 265 133 421 1.36e-22 99.0
MS.gene94544.t1 AT5G44290 26.403 303 151 8 21 265 133 421 1.36e-22 99.0
MS.gene94544.t1 AT1G53050 27.744 328 174 12 27 300 134 452 2.23e-22 98.2
MS.gene94544.t1 AT1G53050 27.744 328 174 12 27 300 134 452 2.23e-22 98.2
MS.gene94544.t1 AT1G09840 35.602 191 103 7 122 293 79 268 4.75e-22 94.7
MS.gene94544.t1 AT2G38620 30.000 230 97 8 26 193 3 230 1.23e-21 92.8
MS.gene94544.t1 AT2G38620 30.000 230 97 8 26 193 3 230 1.23e-21 92.8
MS.gene94544.t1 AT1G09600 28.289 304 161 10 27 279 163 460 1.67e-21 95.9
MS.gene94544.t1 AT5G63610 28.660 321 139 15 24 265 24 333 1.97e-20 92.0
MS.gene94544.t1 AT1G33770 29.148 223 106 7 31 206 147 364 3.27e-20 91.7
MS.gene94544.t1 AT2G23070 25.321 312 184 11 17 282 124 432 1.66e-19 89.0
MS.gene94544.t1 AT1G57700 28.889 225 108 7 29 206 150 369 2.83e-18 86.3
MS.gene94544.t1 AT5G35980 30.579 242 109 7 24 214 121 354 7.70e-18 84.7
MS.gene94544.t1 AT5G35980 31.405 242 107 8 24 214 86 319 1.76e-17 84.0
MS.gene94544.t1 AT5G39440 27.869 244 125 6 25 224 19 255 2.26e-17 83.2
MS.gene94544.t1 AT5G35980 31.405 242 107 8 24 214 121 354 2.59e-17 83.6
MS.gene94544.t1 AT2G23080 26.000 300 165 10 17 265 26 319 1.55e-16 79.7
MS.gene94544.t1 AT3G50000 25.170 294 175 11 17 265 96 389 2.01e-16 79.7
MS.gene94544.t1 AT5G67380 26.104 249 132 9 68 265 115 362 6.48e-16 78.2
MS.gene94544.t1 AT3G29160 29.268 246 122 8 25 225 20 258 6.96e-16 77.8
MS.gene94544.t1 AT3G29160 29.268 246 122 8 25 225 20 258 1.67e-15 77.4
MS.gene94544.t1 AT3G29160 29.268 246 122 8 25 225 20 258 1.67e-15 77.4
MS.gene94544.t1 AT5G24430 27.119 295 135 13 24 267 142 407 3.11e-15 77.0
MS.gene94544.t1 AT5G67380 24.242 297 178 12 15 265 100 395 7.59e-15 75.1
MS.gene94544.t1 AT5G57630 29.851 201 99 8 24 184 11 209 1.05e-14 74.7
MS.gene94544.t1 AT5G57630 29.851 201 99 8 24 184 11 209 1.07e-14 74.7
MS.gene94544.t1 AT2G41140 27.119 295 135 12 22 265 120 385 2.93e-14 73.9
MS.gene94544.t1 AT1G50240 26.446 242 130 9 25 224 6 241 1.56e-13 72.0
MS.gene94544.t1 AT1G50240 26.446 242 130 9 25 224 6 241 1.56e-13 72.0
MS.gene94544.t1 AT2G25090 28.365 208 97 7 24 180 14 220 3.85e-13 70.5
MS.gene94544.t1 AT5G23580 24.567 289 144 9 25 267 22 282 4.50e-13 70.1
MS.gene94544.t1 AT1G53570 24.430 307 162 9 25 279 214 502 1.02e-12 69.3
MS.gene94544.t1 AT1G53570 24.194 310 159 10 25 279 214 502 1.20e-12 68.9
MS.gene94544.t1 AT1G53570 24.194 310 159 10 25 279 214 502 1.24e-12 68.9
MS.gene94544.t1 AT5G21326 26.728 217 103 8 21 188 9 218 1.71e-12 68.2
MS.gene94544.t1 AT3G17750 25.733 307 164 11 22 265 824 1129 2.18e-12 68.6
MS.gene94544.t1 AT1G51660 26.446 242 123 9 31 224 85 319 6.26e-12 66.2
MS.gene94544.t1 AT3G53640 25.392 319 160 14 24 265 322 639 6.58e-12 67.0
MS.gene94544.t1 AT2G23080 25.352 284 161 9 17 255 26 303 1.02e-11 65.1
MS.gene94544.t1 AT3G25840 27.461 193 95 7 117 265 479 670 2.10e-11 65.5
MS.gene94544.t1 AT3G21220 26.522 230 117 8 31 215 76 298 2.67e-11 64.3
MS.gene94544.t1 AT3G21220 26.522 230 117 8 31 215 76 298 2.67e-11 64.3
MS.gene94544.t1 AT3G13530 27.358 212 110 7 13 182 8 217 2.83e-11 65.1
MS.gene94544.t1 AT3G07980 27.143 210 113 5 13 182 8 217 3.17e-11 65.1
MS.gene94544.t1 AT3G07980 27.143 210 113 5 13 182 8 217 3.88e-11 64.7
MS.gene94544.t1 AT3G25840 27.461 193 95 7 117 265 741 932 6.47e-11 63.9

Find 67 sgRNAs with CRISPR-Local

Find 120 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGATGGACTCTGATTTAA+AGG 0.188477 4.1:+477382 MS.gene94544:CDS
ATACACCTGGAATTGATATT+TGG 0.234898 4.1:+477953 MS.gene94544:CDS
ACTGGGAGGCCATTGTTTCC+TGG 0.244611 4.1:+478006 MS.gene94544:CDS
ATCTATATTTGGAAATTTCT+TGG 0.253484 4.1:-478360 None:intergenic
TTATGTTGTCTTTGAGTTGA+TGG 0.283152 4.1:+477367 MS.gene94544:CDS
TTTGATAAATCATGGAAATA+AGG 0.290902 4.1:-478563 None:intergenic
AGAGCCAAAGGATCTATATT+TGG 0.291132 4.1:-478371 None:intergenic
TCCTTTGGCTCTTCGTATAC+TGG 0.299510 4.1:+478382 MS.gene94544:CDS
GCATTTGCAAGAATGTTTCT+TGG 0.324220 4.1:-477588 None:intergenic
GCAGGAGTTTGATTTCTCTT+AGG 0.329011 4.1:-477265 None:intergenic
GTACTATGTTTGTTTGAAAC+AGG 0.344900 4.1:+477061 MS.gene94544:CDS
AAGTTGAAGATATGCGATTT+TGG 0.362830 4.1:+477618 MS.gene94544:CDS
CTGGGAGGCCATTGTTTCCT+GGG 0.371766 4.1:+478007 MS.gene94544:CDS
ATTTCCAAATATAGATCCTT+TGG 0.372500 4.1:+478367 MS.gene94544:CDS
AAAGATATTCCTCAAGCATC+TGG 0.380047 4.1:-478795 None:intergenic
ATATTTGCAGAAATGCTTAC+TGG 0.383296 4.1:+477988 MS.gene94544:CDS
TGCGTAATTTGTACGATATC+AGG 0.396615 4.1:-477305 None:intergenic
ACACTGCATCTACTATATAC+TGG 0.415480 4.1:+477664 MS.gene94544:CDS
ATCATTGGAAAAGGAAGTTA+TGG 0.425020 4.1:+477146 MS.gene94544:CDS
GACAAATACGAAGAACCAAT+TGG 0.425231 4.1:+478029 MS.gene94544:CDS
GGAATTGATATTTGGAGCAT+TGG 0.429072 4.1:+477961 MS.gene94544:CDS
CACTCCTCCTCCTGAGTCCA+TGG 0.430836 4.1:+478074 MS.gene94544:CDS
AATTGTCTAAAGATGATGTC+AGG 0.435421 4.1:+478648 MS.gene94544:CDS
AATTTCTTGGAGAGTGGAAC+GGG 0.440880 4.1:-478347 None:intergenic
GGTCGATGTTTGATAAATCA+TGG 0.455265 4.1:-478571 None:intergenic
ATGCTCCAAATATCAATTCC+AGG 0.459885 4.1:-477958 None:intergenic
GTTATAGAGACCAACCTCTT+CGG 0.502404 4.1:-478444 None:intergenic
AATCAGTCATGATATCCAAT+TGG 0.505068 4.1:-478044 None:intergenic
AAGATATTCCTCAAGCATCT+GGG 0.506750 4.1:-478794 None:intergenic
TGGGCTGAGTGGATGGTTCA+AGG 0.507548 4.1:-478592 None:intergenic
TGGTTCTTCGTATTTGTCCC+AGG 0.507605 4.1:-478024 None:intergenic
TTTGGAAATTTCTTGGAGAG+TGG 0.520773 4.1:-478353 None:intergenic
GATATCATGACTGATTTGCT+TGG 0.522143 4.1:+478051 MS.gene94544:CDS
GTACGATATCAGGATGATGT+TGG 0.522920 4.1:-477295 None:intergenic
ATGCTTGAGGAATATCTTTG+TGG 0.529742 4.1:+478799 MS.gene94544:CDS
TCTTTGAACTCGCGAGGAGA+AGG 0.533778 4.1:-477341 None:intergenic
GTATACTAGCACATTTACCT+TGG 0.538841 4.1:-478847 None:intergenic
GATTTCTCTTAGGATCCGTA+TGG 0.545883 4.1:-477255 None:intergenic
TTGAGTTTGAATTCGAGAGT+AGG 0.547459 4.1:+478624 MS.gene94544:CDS
GATGATGTTGGAGCAAGCGC+AGG 0.558918 4.1:-477283 None:intergenic
GATGCAGTGTCGCTAAATGA+TGG 0.561668 4.1:-477651 None:intergenic
TGATAAACTTACATTGACCA+TGG 0.563500 4.1:-478091 None:intergenic
TTTGAAATGGGCTGAGTGGA+TGG 0.568819 4.1:-478599 None:intergenic
TATTTGCAGAAATGCTTACT+GGG 0.570081 4.1:+477989 MS.gene94544:CDS
AAATTTCTTGGAGAGTGGAA+CGG 0.571908 4.1:-478348 None:intergenic
TCGAGTTGCCTGTCCATACT+CGG 0.573006 4.1:-477108 None:intergenic
AAAATGTCCGTCAGCCGAAG+AGG 0.575499 4.1:+478430 MS.gene94544:CDS
TACCTTATGCAGTATACACC+TGG 0.579379 4.1:+477940 MS.gene94544:intron
AAACCAGGTTCATGTATCCA+AGG 0.583069 4.1:+478830 MS.gene94544:CDS
AGCATACAACAGATGCCATA+CGG 0.588003 4.1:+477240 MS.gene94544:CDS
AGACCAACCTCTTCGGCTGA+CGG 0.588096 4.1:-478437 None:intergenic
TTTGTGGTGGAGATCAAACC+AGG 0.591581 4.1:+478815 MS.gene94544:CDS
TTGAACTCGCGAGGAGAAGG+AGG 0.591889 4.1:-477338 None:intergenic
TTGACCATGGACTCAGGAGG+AGG 0.592445 4.1:-478078 None:intergenic
CTTACATTGACCATGGACTC+AGG 0.594175 4.1:-478084 None:intergenic
CAGGGAGTTGATTTATCGAG+AGG 0.594768 4.1:+478667 MS.gene94544:CDS
TTACCTTGGATACATGAACC+TGG 0.599528 4.1:-478833 None:intergenic
TTGTTTGAAACAGGCTACAC+CGG 0.602384 4.1:+477070 MS.gene94544:CDS
TCCAGTATACGAAGAGCCAA+AGG 0.607342 4.1:-478383 None:intergenic
CTTGAGGAATATCTTTGTGG+TGG 0.612074 4.1:+478802 MS.gene94544:CDS
GTATTTGTCCCAGGAAACAA+TGG 0.619809 4.1:-478015 None:intergenic
TAAATATCTTTGAACTCGCG+AGG 0.621379 4.1:-477347 None:intergenic
ATTGTCTAAAGATGATGTCA+GGG 0.621608 4.1:+478649 MS.gene94544:CDS
GTATCATCCCCAGATGCTTG+AGG 0.628011 4.1:+478786 MS.gene94544:CDS
AGATATTCCTCAAGCATCTG+GGG 0.631893 4.1:-478793 None:intergenic
TTGCAGAAATGCTTACTGGG+AGG 0.697678 4.1:+477992 MS.gene94544:CDS
ACATTGACCATGGACTCAGG+AGG 0.732102 4.1:-478081 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTACTATCTAAAATAATAA+AGG - chr4.1:477517-477536 None:intergenic 10.0%
!! GAAGTTATTATAATTAATGA+TGG - chr4.1:477490-477509 None:intergenic 15.0%
!!! TACCTTAATGTATATATTTT+AGG - chr4.1:477466-477485 None:intergenic 15.0%
!!! TTTTTACATCATATTTTCTT+GGG + chr4.1:477846-477865 MS.gene94544:intron 15.0%
!!! TTTTTTACATCATATTTTCT+TGG + chr4.1:477845-477864 MS.gene94544:intron 15.0%
!! ATCTATATTTGGAAATTTCT+TGG - chr4.1:478363-478382 None:intergenic 20.0%
!! ATTATTCTAACTATAGCATT+AGG - chr4.1:478154-478173 None:intergenic 20.0%
!! GTATCTTGAAAACATAATAT+TGG - chr4.1:478208-478227 None:intergenic 20.0%
!! TACAAGTTCAAAAAAATCAT+TGG + chr4.1:477131-477150 MS.gene94544:CDS 20.0%
!! TATTAACTATTACAACGTAA+AGG - chr4.1:478741-478760 None:intergenic 20.0%
!! TTCAAAAAAATCATTGGAAA+AGG + chr4.1:477137-477156 MS.gene94544:CDS 20.0%
!! TTCATTGATAAATAACAAAG+AGG + chr4.1:478497-478516 MS.gene94544:intron 20.0%
!! TTTGATAAATCATGGAAATA+AGG - chr4.1:478566-478585 None:intergenic 20.0%
!!! TAATTTACCTACTTTTACAA+AGG + chr4.1:477746-477765 MS.gene94544:intron 20.0%
!!! TACGTTTAAAATTCAGATTT+TGG + chr4.1:478762-478781 MS.gene94544:intron 20.0%
!!! TCAAACTCAAATTTTGAAAT+GGG - chr4.1:478614-478633 None:intergenic 20.0%
!!! TTCAAACTCAAATTTTGAAA+TGG - chr4.1:478615-478634 None:intergenic 20.0%
!!! TTTGGAATATGTAAAATCAA+GGG - chr4.1:478284-478303 None:intergenic 20.0%
! ATATAGTCCTTTGTAAAAGT+AGG - chr4.1:477756-477775 None:intergenic 25.0%
! ATTTCCAAATATAGATCCTT+TGG + chr4.1:478367-478386 MS.gene94544:CDS 25.0%
! GGCCTAAAATATATACATTA+AGG + chr4.1:477461-477480 MS.gene94544:intron 25.0%
! TAGTAAAATCAAGCTTCATT+TGG - chr4.1:478255-478274 None:intergenic 25.0%
! TGTATGTGATTAACTAGAAA+AGG + chr4.1:478468-478487 MS.gene94544:intron 25.0%
!! GTTTGGAATATGTAAAATCA+AGG - chr4.1:478285-478304 None:intergenic 25.0%
!!! CTATTGATTTCATAAAACTG+CGG - chr4.1:478126-478145 None:intergenic 25.0%
!!! TGTTTTCAAGATACAACTTA+CGG + chr4.1:478214-478233 MS.gene94544:intron 25.0%
!!! TTTTCTAGTTAATCACATAC+AGG - chr4.1:478469-478488 None:intergenic 25.0%
AAAAAAGAACCACATAGTTC+AGG - chr4.1:477801-477820 None:intergenic 30.0%
AAGAAAAACTTGTGATGATC+AGG - chr4.1:477425-477444 None:intergenic 30.0%
AATATGTAAAATCAAGGGAG+CGG - chr4.1:478279-478298 None:intergenic 30.0%
AATCAGTCATGATATCCAAT+TGG - chr4.1:478047-478066 None:intergenic 30.0%
AATTGTCTAAAGATGATGTC+AGG + chr4.1:478648-478667 MS.gene94544:CDS 30.0%
ATACACCTGGAATTGATATT+TGG + chr4.1:477953-477972 MS.gene94544:CDS 30.0%
ATATTTGCAGAAATGCTTAC+TGG + chr4.1:477988-478007 MS.gene94544:CDS 30.0%
ATCATTGGAAAAGGAAGTTA+TGG + chr4.1:477146-477165 MS.gene94544:CDS 30.0%
ATTGTCTAAAGATGATGTCA+GGG + chr4.1:478649-478668 MS.gene94544:CDS 30.0%
TATTTGCAGAAATGCTTACT+GGG + chr4.1:477989-478008 MS.gene94544:CDS 30.0%
TGATAAACTTACATTGACCA+TGG - chr4.1:478094-478113 None:intergenic 30.0%
! AAGATATGATTTGAAGTAGG+AGG - chr4.1:478716-478735 None:intergenic 30.0%
! AAGTTGAAGATATGCGATTT+TGG + chr4.1:477618-477637 MS.gene94544:CDS 30.0%
! GAGAAGATATGATTTGAAGT+AGG - chr4.1:478719-478738 None:intergenic 30.0%
! GTACTATGTTTGTTTGAAAC+AGG + chr4.1:477061-477080 MS.gene94544:CDS 30.0%
! TTTGTTATGCTTGTGATATC+AGG + chr4.1:478529-478548 MS.gene94544:intron 30.0%
! TTTTCTTGTACCAACTTCTT+CGG + chr4.1:477438-477457 MS.gene94544:intron 30.0%
!! AAATTTCTAGCTTTCTCGTT+TGG - chr4.1:478302-478321 None:intergenic 30.0%
!! CGCAGTTTTATGAAATCAAT+AGG + chr4.1:478124-478143 MS.gene94544:intron 30.0%
!! TTATGTTGTCTTTGAGTTGA+TGG + chr4.1:477367-477386 MS.gene94544:CDS 30.0%
AAAGATATTCCTCAAGCATC+TGG - chr4.1:478798-478817 None:intergenic 35.0%
AAATTTCTTGGAGAGTGGAA+CGG - chr4.1:478351-478370 None:intergenic 35.0%
AAGATATTCCTCAAGCATCT+GGG - chr4.1:478797-478816 None:intergenic 35.0%
ACACTGCATCTACTATATAC+TGG + chr4.1:477664-477683 MS.gene94544:CDS 35.0%
AGAGCCAAAGGATCTATATT+TGG - chr4.1:478374-478393 None:intergenic 35.0%
ATACGTTGAACAGATCAACA+TGG - chr4.1:477719-477738 None:intergenic 35.0%
ATATGTAAAATCAAGGGAGC+GGG - chr4.1:478278-478297 None:intergenic 35.0%
ATGCTCCAAATATCAATTCC+AGG - chr4.1:477961-477980 None:intergenic 35.0%
ATGCTTGAGGAATATCTTTG+TGG + chr4.1:478799-478818 MS.gene94544:CDS 35.0%
CAAAGGACTATATTGCAACT+AGG + chr4.1:477763-477782 MS.gene94544:intron 35.0%
GACAAATACGAAGAACCAAT+TGG + chr4.1:478029-478048 MS.gene94544:CDS 35.0%
GCATTTGCAAGAATGTTTCT+TGG - chr4.1:477591-477610 None:intergenic 35.0%
GGTCGATGTTTGATAAATCA+TGG - chr4.1:478574-478593 None:intergenic 35.0%
TAAATATCTTTGAACTCGCG+AGG - chr4.1:477350-477369 None:intergenic 35.0%
TCGGTAAAAAACTCTGTTTC+CGG - chr4.1:477092-477111 None:intergenic 35.0%
TTGAGTTTGAATTCGAGAGT+AGG + chr4.1:478624-478643 MS.gene94544:CDS 35.0%
TTTCTTGTACCAACTTCTTC+GGG + chr4.1:477439-477458 MS.gene94544:intron 35.0%
TTTGGAAATTTCTTGGAGAG+TGG - chr4.1:478356-478375 None:intergenic 35.0%
! AGTTGATTTATCGAGAGGTA+TGG + chr4.1:478672-478691 MS.gene94544:intron 35.0%
! GGAATTGATATTTGGAGCAT+TGG + chr4.1:477961-477980 MS.gene94544:CDS 35.0%
! TGCGTAATTTGTACGATATC+AGG - chr4.1:477308-477327 None:intergenic 35.0%
!! GATATCATGACTGATTTGCT+TGG + chr4.1:478051-478070 MS.gene94544:CDS 35.0%
!! GTTGATGGACTCTGATTTAA+AGG + chr4.1:477382-477401 MS.gene94544:CDS 35.0%
!!! AAATTTTGAAATGGGCTGAG+TGG - chr4.1:478606-478625 None:intergenic 35.0%
!!! ACAGAGTTTTTTACCGAGTA+TGG + chr4.1:477095-477114 MS.gene94544:CDS 35.0%
AAACCAGGTTCATGTATCCA+AGG + chr4.1:478830-478849 MS.gene94544:CDS 40.0%
AATTTCTTGGAGAGTGGAAC+GGG - chr4.1:478350-478369 None:intergenic 40.0%
ACTTGTGATGATCAGGAGTA+AGG - chr4.1:477418-477437 None:intergenic 40.0%
AGATATTCCTCAAGCATCTG+GGG - chr4.1:478796-478815 None:intergenic 40.0%
AGCATACAACAGATGCCATA+CGG + chr4.1:477240-477259 MS.gene94544:CDS 40.0%
AGGACTATATTGCAACTAGG+TGG + chr4.1:477766-477785 MS.gene94544:intron 40.0%
CTTGAGGAATATCTTTGTGG+TGG + chr4.1:478802-478821 MS.gene94544:CDS 40.0%
GATTTCTCTTAGGATCCGTA+TGG - chr4.1:477258-477277 None:intergenic 40.0%
GGTGTATACTGCATAAGGTA+AGG - chr4.1:477940-477959 None:intergenic 40.0%
GTACGATATCAGGATGATGT+TGG - chr4.1:477298-477317 None:intergenic 40.0%
GTATTTGTCCCAGGAAACAA+TGG - chr4.1:478018-478037 None:intergenic 40.0%
GTTATAGAGACCAACCTCTT+CGG - chr4.1:478447-478466 None:intergenic 40.0%
TACCTTATGCAGTATACACC+TGG + chr4.1:477940-477959 MS.gene94544:intron 40.0%
TTACCTTGGATACATGAACC+TGG - chr4.1:478836-478855 None:intergenic 40.0%
TTCCAGGTGTATACTGCATA+AGG - chr4.1:477945-477964 None:intergenic 40.0%
TTCTTGTACCAACTTCTTCG+GGG + chr4.1:477440-477459 MS.gene94544:intron 40.0%
! GAAGATATGCGATTTTGGAC+TGG + chr4.1:477623-477642 MS.gene94544:CDS 40.0%
! GCAGGAGTTTGATTTCTCTT+AGG - chr4.1:477268-477287 None:intergenic 40.0%
! TTGTTTGAAACAGGCTACAC+CGG + chr4.1:477070-477089 MS.gene94544:CDS 40.0%
!!! GTTTTTTACCGAGTATGGAC+AGG + chr4.1:477100-477119 MS.gene94544:CDS 40.0%
AACCACATAGTTCAGGTGCA+CGG - chr4.1:477794-477813 None:intergenic 45.0%
CTTACATTGACCATGGACTC+AGG - chr4.1:478087-478106 None:intergenic 45.0%
TCCAGTATACGAAGAGCCAA+AGG - chr4.1:478386-478405 None:intergenic 45.0%
TGGTTCTTCGTATTTGTCCC+AGG - chr4.1:478027-478046 None:intergenic 45.0%
TTGCAGAAATGCTTACTGGG+AGG + chr4.1:477992-478011 MS.gene94544:CDS 45.0%
! ATTTTAGGCCCCGAAGAAGT+TGG - chr4.1:477451-477470 None:intergenic 45.0%
! CAGGGAGTTGATTTATCGAG+AGG + chr4.1:478667-478686 MS.gene94544:CDS 45.0%
! GATGCAGTGTCGCTAAATGA+TGG - chr4.1:477654-477673 None:intergenic 45.0%
! TTTGTGGTGGAGATCAAACC+AGG + chr4.1:478815-478834 MS.gene94544:CDS 45.0%
!! TCCTTTGGCTCTTCGTATAC+TGG + chr4.1:478382-478401 MS.gene94544:CDS 45.0%
!! TTTGAAATGGGCTGAGTGGA+TGG - chr4.1:478602-478621 None:intergenic 45.0%
!!! TCGGCTGACGGACATTTTTT+AGG - chr4.1:478428-478447 None:intergenic 45.0%
AAAATGTCCGTCAGCCGAAG+AGG + chr4.1:478430-478449 MS.gene94544:CDS 50.0%
ACATTGACCATGGACTCAGG+AGG - chr4.1:478084-478103 None:intergenic 50.0%
GGAGGAATGAGCGAAATGCA+TGG - chr4.1:478698-478717 None:intergenic 50.0%
GTATCATCCCCAGATGCTTG+AGG + chr4.1:478786-478805 MS.gene94544:CDS 50.0%
TACCGTGCACCTGAACTATG+TGG + chr4.1:477789-477808 MS.gene94544:intron 50.0%
TCTTTGAACTCGCGAGGAGA+AGG - chr4.1:477344-477363 None:intergenic 50.0%
! TCGAGTTGCCTGTCCATACT+CGG - chr4.1:477111-477130 None:intergenic 50.0%
ACTGGGAGGCCATTGTTTCC+TGG + chr4.1:478006-478025 MS.gene94544:CDS 55.0%
AGACCAACCTCTTCGGCTGA+CGG - chr4.1:478440-478459 None:intergenic 55.0%
CTGGGAGGCCATTGTTTCCT+GGG + chr4.1:478007-478026 MS.gene94544:CDS 55.0%
GATGATGTTGGAGCAAGCGC+AGG - chr4.1:477286-477305 None:intergenic 55.0%
TGGGCTGAGTGGATGGTTCA+AGG - chr4.1:478595-478614 None:intergenic 55.0%
TTGAACTCGCGAGGAGAAGG+AGG - chr4.1:477341-477360 None:intergenic 55.0%
TTGACCATGGACTCAGGAGG+AGG - chr4.1:478081-478100 None:intergenic 55.0%
CACTCCTCCTCCTGAGTCCA+TGG + chr4.1:478074-478093 MS.gene94544:CDS 60.0%
TGTCCGTCAGCCGAAGAGGT+TGG + chr4.1:478434-478453 MS.gene94544:intron 60.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 477059 478855 477059 ID=MS.gene94544
chr4.1 mRNA 477059 478855 477059 ID=MS.gene94544.t1;Parent=MS.gene94544
chr4.1 exon 477059 477410 477059 ID=MS.gene94544.t1.exon1;Parent=MS.gene94544.t1
chr4.1 CDS 477059 477410 477059 ID=cds.MS.gene94544.t1;Parent=MS.gene94544.t1
chr4.1 exon 477562 477689 477562 ID=MS.gene94544.t1.exon2;Parent=MS.gene94544.t1
chr4.1 CDS 477562 477689 477562 ID=cds.MS.gene94544.t1;Parent=MS.gene94544.t1
chr4.1 exon 477952 478101 477952 ID=MS.gene94544.t1.exon3;Parent=MS.gene94544.t1
chr4.1 CDS 477952 478101 477952 ID=cds.MS.gene94544.t1;Parent=MS.gene94544.t1
chr4.1 exon 478308 478451 478308 ID=MS.gene94544.t1.exon4;Parent=MS.gene94544.t1
chr4.1 CDS 478308 478451 478308 ID=cds.MS.gene94544.t1;Parent=MS.gene94544.t1
chr4.1 exon 478551 478688 478551 ID=MS.gene94544.t1.exon5;Parent=MS.gene94544.t1
chr4.1 CDS 478551 478688 478551 ID=cds.MS.gene94544.t1;Parent=MS.gene94544.t1
chr4.1 exon 478778 478855 478778 ID=MS.gene94544.t1.exon6;Parent=MS.gene94544.t1
chr4.1 CDS 478778 478855 478778 ID=cds.MS.gene94544.t1;Parent=MS.gene94544.t1
Gene Sequence

>MS.gene94544

ATGTACTATGTTTGTTTGAAACAGGCTACACCGGAAACAGAGTTTTTTACCGAGTATGGACAGGCAACTCGATACAAGTTCAAAAAAATCATTGGAAAAGGAAGTTATGGTGTTGTCTGCTCTGCAATAGACACTCTTACTAATCAAAAAGTTGCTATCAAGAAAATTAACAATGTTTTTGAGCATACAACAGATGCCATACGGATCCTAAGAGAAATCAAACTCCTGCGCTTGCTCCAACATCATCCTGATATCGTACAAATTACGCATATTATGCTTCCTCCTTCTCCTCGCGAGTTCAAAGATATTTATGTTGTCTTTGAGTTGATGGACTCTGATTTAAAGGCAAATAGTGACCTTACTCCTGATCATCACAAGTTTTTCTTGTACCAACTTCTTCGGGGCCTAAAATATATACATTAAGGTATCCATCATTAATTATAATAACTTCACTTCCTTTATTATTTTAGATAGTAAACTCATGTATCTATTTCATTTTGCAGCTAACGTGTTTCATCGCGATTTGAAACCAAGAAACATTCTTGCAAATGCTGATTGCAAGTTGAAGATATGCGATTTTGGACTGGCTCGACCATCATTTAGCGACACTGCATCTACTATATACTGGACTGTAAGTACTCTAATAGTAATACACAACCATGTTGATCTGTTCAACGTATGCTGACTTAATTTACCTACTTTTACAAAGGACTATATTGCAACTAGGTGGTACCGTGCACCTGAACTATGTGGTTCTTTTTTCACAAAAGTAAGTTTTTTTTTTTTTTTTTTACATCATATTTTCTTGGGTTGTGTATGTGTGTGATACAAGAAAGTGACTACACTTGTTGTATTGAAATATGCATGTAATTTATAATCCTTACCTTATGCAGTATACACCTGGAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTTACTGGGAGGCCATTGTTTCCTGGGACAAATACGAAGAACCAATTGGATATCATGACTGATTTGCTTGGCACTCCTCCTCCTGAGTCCATGGTCAATGTAAGTTTATCAAAATCTATTCCGCAGTTTTATGAAATCAATAGGCATGCCTAATGCTATAGTTAGAATAATGCTGAATTTCTACTGCTTCTAAAAAAATATTCCAATATTATGTTTTCAAGATACAACTTACGGTTTATTGTAATAAATCCAAATGAAGCTTGATTTTACTACCCGCTCCCTTGATTTTACATATTCCAAACGAGAAAGCTAGAAATTTTCTTAGTAAAATGCGAAAAAAGCAACCCGTTCCACTCTCCAAGAAATTTCCAAATATAGATCCTTTGGCTCTTCGTATACTGGAGCGCTTACTTGCATTTGATCCTAAAAAATGTCCGTCAGCCGAAGAGGTTGGTCTCTATAACCTGTATGTGATTAACTAGAAAAGGAGAATTTTCATTGATAAATAACAAAGAGGATTTTTTTTTTTGTTATGCTTGTGATATCAGGCATTGTCTGATCCTTATTTCCATGATTTATCAAACATCGACCTTGAACCATCCACTCAGCCCATTTCAAAATTTGAGTTTGAATTCGAGAGTAGGAAATTGTCTAAAGATGATGTCAGGGAGTTGATTTATCGAGAGGTATGGCCATGCATTTCGCTCATTCCTCCTACTTCAAATCATATCTTCTCCTTTACGTTGTAATAGTTAATATTACGTTTAAAATTCAGATTTTGGAGTATCATCCCCAGATGCTTGAGGAATATCTTTGTGGTGGAGATCAAACCAGGTTCATGTATCCAAGGTAA
Protein sequence

>MS.gene94544.t1

MYYVCLKQATPETEFFTEYGQATRYKFKKIIGKGSYGVVCSAIDTLTNQKVAIKKINNVFEHTTDAIRILREIKLLRLLQHHPDIVQITHIMLPPSPREFKDIYVVFELMDSDLKANTNVFHRDLKPRNILANADCKLKICDFGLARPSFSDTASTIYWTYTPGIDIWSIGCIFAEMLTGRPLFPGTNTKNQLDIMTDLLGTPPPESMVNKARNFLSKMRKKQPVPLSKKFPNIDPLALRILERLLAFDPKKCPSAEEALSDPYFHDLSNIDLEPSTQPISKFEFEFESRKLSKDDVRELIYREILEYHPQMLEEYLCGGDQTRFMYPR