Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94669.t1 | XP_013449146.1 | 88.7 | 238 | 27 | 0 | 19 | 256 | 1 | 238 | 6.90E-111 | 410.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94669.t1 | Q9SJW0 | 49.5 | 105 | 49 | 2 | 25 | 128 | 9 | 110 | 6.7e-22 | 105.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94669.t1 | A0A072U1W8 | 88.7 | 238 | 27 | 0 | 19 | 256 | 1 | 238 | 5.0e-111 | 410.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene94669.t1 | TF | GARP-G2-like |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94669.t1 | MTR_7g068600 | 93.697 | 238 | 15 | 0 | 19 | 256 | 1 | 238 | 1.33e-166 | 460 |
MS.gene94669.t1 | MTR_7g088070 | 54.545 | 132 | 54 | 2 | 31 | 159 | 50 | 178 | 4.32e-42 | 145 |
MS.gene94669.t1 | MTR_7g088070 | 55.039 | 129 | 54 | 2 | 31 | 159 | 50 | 174 | 1.50e-41 | 144 |
MS.gene94669.t1 | MTR_2g027860 | 51.471 | 136 | 61 | 3 | 31 | 164 | 49 | 181 | 1.36e-40 | 142 |
MS.gene94669.t1 | MTR_1g053835 | 44.720 | 161 | 78 | 6 | 16 | 174 | 242 | 393 | 2.19e-34 | 128 |
MS.gene94669.t1 | MTR_7g098250 | 46.667 | 135 | 69 | 1 | 22 | 156 | 253 | 384 | 2.75e-33 | 126 |
MS.gene94669.t1 | MTR_7g093030 | 44.755 | 143 | 69 | 3 | 31 | 173 | 212 | 344 | 3.02e-33 | 124 |
MS.gene94669.t1 | MTR_1g080330 | 41.143 | 175 | 89 | 6 | 11 | 184 | 161 | 322 | 4.88e-31 | 118 |
MS.gene94669.t1 | MTR_2g086450 | 38.764 | 178 | 84 | 5 | 31 | 188 | 45 | 217 | 1.10e-27 | 109 |
MS.gene94669.t1 | MTR_6g444980 | 41.722 | 151 | 81 | 3 | 11 | 158 | 16 | 162 | 1.81e-27 | 108 |
MS.gene94669.t1 | MTR_5g027440 | 41.259 | 143 | 65 | 3 | 31 | 159 | 25 | 162 | 2.59e-27 | 106 |
MS.gene94669.t1 | MTR_6g444980 | 41.447 | 152 | 82 | 3 | 11 | 159 | 16 | 163 | 3.53e-27 | 108 |
MS.gene94669.t1 | MTR_6g032990 | 41.611 | 149 | 68 | 3 | 27 | 159 | 38 | 183 | 3.68e-27 | 108 |
MS.gene94669.t1 | MTR_7g115530 | 41.860 | 129 | 72 | 1 | 31 | 159 | 218 | 343 | 1.55e-26 | 107 |
MS.gene94669.t1 | MTR_1g080330 | 45.455 | 132 | 61 | 4 | 11 | 141 | 161 | 282 | 1.14e-25 | 102 |
MS.gene94669.t1 | MTR_4g081710 | 38.621 | 145 | 73 | 4 | 27 | 159 | 13 | 153 | 6.40e-25 | 101 |
MS.gene94669.t1 | MTR_5g041350 | 36.735 | 147 | 74 | 4 | 27 | 159 | 11 | 152 | 4.28e-23 | 96.7 |
MS.gene94669.t1 | MTR_2g027800 | 40.299 | 134 | 67 | 3 | 27 | 156 | 35 | 159 | 2.83e-22 | 93.6 |
MS.gene94669.t1 | MTR_1g053800 | 41.060 | 151 | 78 | 4 | 13 | 156 | 152 | 298 | 4.50e-22 | 93.2 |
MS.gene94669.t1 | MTR_7g093030 | 57.500 | 80 | 29 | 3 | 31 | 109 | 212 | 287 | 4.70e-22 | 92.8 |
MS.gene94669.t1 | MTR_7g115530 | 42.857 | 112 | 61 | 1 | 31 | 142 | 218 | 326 | 5.88e-22 | 93.2 |
MS.gene94669.t1 | MTR_2g027800 | 37.324 | 142 | 74 | 2 | 27 | 156 | 35 | 173 | 8.07e-22 | 92.4 |
MS.gene94669.t1 | MTR_1g090670 | 37.778 | 135 | 72 | 2 | 31 | 156 | 44 | 175 | 2.42e-19 | 85.5 |
MS.gene94669.t1 | MTR_7g115530 | 56.923 | 65 | 25 | 1 | 31 | 95 | 218 | 279 | 6.81e-18 | 81.6 |
MS.gene94669.t1 | MTR_7g115530 | 56.923 | 65 | 25 | 1 | 31 | 95 | 218 | 279 | 1.91e-17 | 80.9 |
MS.gene94669.t1 | MTR_1g053830 | 48.101 | 79 | 37 | 2 | 27 | 105 | 14 | 88 | 2.35e-16 | 72.8 |
MS.gene94669.t1 | MTR_7g093010 | 33.735 | 166 | 94 | 5 | 14 | 171 | 196 | 353 | 3.46e-16 | 77.4 |
MS.gene94669.t1 | MTR_7g115530 | 58.182 | 55 | 20 | 1 | 31 | 85 | 218 | 269 | 6.29e-14 | 70.1 |
MS.gene94669.t1 | MTR_3g450310 | 32.164 | 171 | 105 | 5 | 20 | 184 | 5 | 170 | 1.19e-13 | 68.2 |
MS.gene94669.t1 | MTR_7g115530 | 55.357 | 56 | 22 | 1 | 31 | 86 | 218 | 270 | 2.64e-13 | 68.6 |
MS.gene94669.t1 | MTR_2g023580 | 61.818 | 55 | 18 | 1 | 33 | 87 | 57 | 108 | 6.42e-13 | 66.6 |
MS.gene94669.t1 | MTR_2g084230 | 59.322 | 59 | 21 | 1 | 33 | 91 | 99 | 154 | 6.72e-13 | 68.2 |
MS.gene94669.t1 | MTR_2g084230 | 59.322 | 59 | 21 | 1 | 33 | 91 | 99 | 154 | 7.31e-13 | 67.4 |
MS.gene94669.t1 | MTR_8g086410 | 57.627 | 59 | 22 | 1 | 33 | 91 | 111 | 166 | 1.19e-12 | 67.4 |
MS.gene94669.t1 | MTR_8g086410 | 57.627 | 59 | 22 | 1 | 33 | 91 | 113 | 168 | 1.21e-12 | 67.4 |
MS.gene94669.t1 | MTR_7g069660 | 55.000 | 60 | 24 | 1 | 33 | 92 | 73 | 129 | 1.61e-12 | 66.6 |
MS.gene94669.t1 | MTR_2g016220 | 57.627 | 59 | 22 | 1 | 33 | 91 | 91 | 146 | 2.71e-12 | 66.2 |
MS.gene94669.t1 | MTR_2g016220 | 57.627 | 59 | 22 | 1 | 33 | 91 | 91 | 146 | 2.76e-12 | 66.2 |
MS.gene94669.t1 | MTR_6g071625 | 53.448 | 58 | 24 | 1 | 33 | 90 | 204 | 258 | 4.02e-12 | 65.5 |
MS.gene94669.t1 | MTR_8g066310 | 52.542 | 59 | 25 | 1 | 33 | 91 | 175 | 230 | 8.82e-12 | 64.7 |
MS.gene94669.t1 | MTR_3g064840 | 39.773 | 88 | 50 | 1 | 33 | 120 | 276 | 360 | 1.25e-11 | 64.3 |
MS.gene94669.t1 | MTR_1g021520 | 43.038 | 79 | 42 | 1 | 33 | 111 | 128 | 203 | 1.46e-11 | 63.5 |
MS.gene94669.t1 | MTR_5g029470 | 53.448 | 58 | 24 | 1 | 33 | 90 | 221 | 275 | 3.51e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94669.t1 | AT2G01060 | 46.341 | 164 | 80 | 4 | 27 | 185 | 11 | 171 | 2.51e-43 | 148 |
MS.gene94669.t1 | AT5G06800 | 45.695 | 151 | 77 | 3 | 14 | 164 | 176 | 321 | 9.95e-37 | 133 |
MS.gene94669.t1 | AT5G06800 | 44.516 | 155 | 78 | 3 | 14 | 164 | 176 | 326 | 2.10e-36 | 132 |
MS.gene94669.t1 | AT4G28610 | 44.828 | 145 | 66 | 3 | 18 | 156 | 212 | 348 | 2.18e-31 | 120 |
MS.gene94669.t1 | AT5G29000 | 42.857 | 140 | 74 | 3 | 20 | 156 | 177 | 313 | 2.07e-30 | 116 |
MS.gene94669.t1 | AT5G29000 | 42.857 | 140 | 74 | 3 | 20 | 156 | 177 | 313 | 2.07e-30 | 116 |
MS.gene94669.t1 | AT5G29000 | 42.857 | 140 | 74 | 3 | 20 | 156 | 220 | 356 | 2.85e-30 | 117 |
MS.gene94669.t1 | AT1G79430 | 40.909 | 154 | 72 | 4 | 31 | 179 | 34 | 173 | 1.66e-29 | 114 |
MS.gene94669.t1 | AT3G24120 | 36.571 | 175 | 87 | 3 | 31 | 193 | 41 | 203 | 1.69e-29 | 112 |
MS.gene94669.t1 | AT1G69580 | 42.384 | 151 | 65 | 4 | 27 | 159 | 30 | 176 | 4.59e-29 | 112 |
MS.gene94669.t1 | AT3G04450 | 34.536 | 194 | 114 | 5 | 4 | 188 | 171 | 360 | 5.97e-29 | 113 |
MS.gene94669.t1 | AT3G04450 | 34.536 | 194 | 114 | 5 | 4 | 188 | 171 | 360 | 5.97e-29 | 113 |
MS.gene94669.t1 | AT3G04450 | 34.536 | 194 | 114 | 5 | 4 | 188 | 211 | 400 | 6.97e-29 | 113 |
MS.gene94669.t1 | AT1G69580 | 42.105 | 152 | 65 | 4 | 27 | 159 | 30 | 177 | 7.14e-29 | 112 |
MS.gene94669.t1 | AT3G13040 | 42.568 | 148 | 76 | 3 | 18 | 159 | 227 | 371 | 1.14e-27 | 110 |
MS.gene94669.t1 | AT3G13040 | 42.568 | 148 | 76 | 3 | 18 | 159 | 227 | 371 | 1.14e-27 | 110 |
MS.gene94669.t1 | AT3G13040 | 42.568 | 148 | 76 | 3 | 18 | 159 | 227 | 371 | 1.14e-27 | 110 |
MS.gene94669.t1 | AT4G13640 | 35.897 | 195 | 90 | 5 | 31 | 211 | 37 | 210 | 1.68e-27 | 107 |
MS.gene94669.t1 | AT3G24120 | 35.955 | 178 | 87 | 4 | 31 | 193 | 41 | 206 | 1.84e-27 | 107 |
MS.gene94669.t1 | AT3G04030 | 41.611 | 149 | 67 | 4 | 27 | 159 | 41 | 185 | 1.29e-26 | 107 |
MS.gene94669.t1 | AT5G18240 | 42.953 | 149 | 65 | 5 | 27 | 159 | 41 | 185 | 1.62e-26 | 106 |
MS.gene94669.t1 | AT5G18240 | 42.953 | 149 | 65 | 5 | 27 | 159 | 41 | 185 | 1.62e-26 | 106 |
MS.gene94669.t1 | AT4G13640 | 35.354 | 198 | 90 | 6 | 31 | 211 | 37 | 213 | 1.87e-25 | 102 |
MS.gene94669.t1 | AT2G20400 | 42.520 | 127 | 69 | 2 | 31 | 156 | 231 | 354 | 2.63e-25 | 103 |
MS.gene94669.t1 | AT5G45580 | 38.889 | 144 | 67 | 3 | 31 | 156 | 7 | 147 | 9.13e-25 | 99.8 |
MS.gene94669.t1 | AT5G45580 | 38.889 | 144 | 67 | 3 | 31 | 156 | 23 | 163 | 1.18e-24 | 99.8 |
MS.gene94669.t1 | AT2G01060 | 42.623 | 122 | 65 | 3 | 69 | 185 | 1 | 122 | 1.37e-24 | 98.6 |
MS.gene94669.t1 | AT2G20400 | 40.476 | 126 | 72 | 1 | 31 | 156 | 231 | 353 | 3.40e-24 | 100 |
MS.gene94669.t1 | AT3G04030 | 40.940 | 149 | 67 | 5 | 27 | 159 | 41 | 184 | 4.37e-24 | 100 |
MS.gene94669.t1 | AT5G18240 | 41.611 | 149 | 65 | 6 | 27 | 159 | 41 | 183 | 2.53e-23 | 97.8 |
MS.gene94669.t1 | AT5G06800 | 56.098 | 82 | 32 | 2 | 14 | 95 | 176 | 253 | 8.35e-23 | 94.7 |
MS.gene94669.t1 | AT3G12730 | 37.037 | 135 | 74 | 3 | 31 | 157 | 23 | 154 | 9.90e-23 | 93.6 |
MS.gene94669.t1 | AT3G04030 | 39.597 | 149 | 64 | 5 | 27 | 159 | 41 | 179 | 1.13e-22 | 95.9 |
MS.gene94669.t1 | AT5G18240 | 40.940 | 149 | 62 | 6 | 27 | 159 | 41 | 179 | 1.39e-22 | 95.9 |
MS.gene94669.t1 | AT5G18240 | 40.940 | 149 | 62 | 6 | 27 | 159 | 41 | 179 | 1.39e-22 | 95.9 |
MS.gene94669.t1 | AT5G29000 | 47.872 | 94 | 46 | 1 | 20 | 113 | 220 | 310 | 8.01e-20 | 87.0 |
MS.gene94669.t1 | AT3G04450 | 42.857 | 91 | 49 | 1 | 4 | 94 | 211 | 298 | 1.06e-18 | 84.0 |
MS.gene94669.t1 | AT2G42660 | 61.905 | 63 | 21 | 1 | 33 | 95 | 52 | 111 | 1.48e-15 | 74.3 |
MS.gene94669.t1 | AT2G06020 | 50.820 | 61 | 27 | 1 | 31 | 91 | 86 | 143 | 2.08e-15 | 74.7 |
MS.gene94669.t1 | AT1G79430 | 35.294 | 119 | 61 | 3 | 66 | 179 | 1 | 108 | 2.25e-15 | 74.3 |
MS.gene94669.t1 | AT2G40260 | 51.190 | 84 | 36 | 3 | 7 | 90 | 60 | 138 | 5.47e-15 | 74.3 |
MS.gene94669.t1 | AT4G04605 | 51.351 | 74 | 32 | 2 | 33 | 106 | 16 | 85 | 1.99e-13 | 67.8 |
MS.gene94669.t1 | AT5G42630 | 46.154 | 91 | 41 | 3 | 16 | 105 | 94 | 177 | 2.77e-13 | 67.8 |
MS.gene94669.t1 | AT5G42630 | 48.148 | 81 | 38 | 2 | 33 | 112 | 107 | 184 | 4.03e-13 | 67.8 |
MS.gene94669.t1 | AT3G04030 | 37.273 | 110 | 52 | 3 | 66 | 159 | 1 | 109 | 1.42e-12 | 66.6 |
MS.gene94669.t1 | AT4G17695 | 38.835 | 103 | 47 | 2 | 33 | 122 | 166 | 265 | 9.32e-12 | 64.3 |
MS.gene94669.t1 | AT5G16560 | 46.575 | 73 | 34 | 2 | 33 | 103 | 221 | 290 | 1.78e-11 | 63.9 |
MS.gene94669.t1 | AT2G38300 | 55.932 | 59 | 23 | 1 | 33 | 91 | 56 | 111 | 2.42e-11 | 63.2 |
MS.gene94669.t1 | AT2G02060 | 60.000 | 55 | 19 | 1 | 33 | 87 | 31 | 82 | 2.91e-11 | 62.4 |
MS.gene94669.t1 | AT2G02060 | 60.000 | 55 | 19 | 1 | 33 | 87 | 31 | 82 | 2.91e-11 | 62.4 |
MS.gene94669.t1 | AT1G32240 | 53.448 | 58 | 24 | 1 | 33 | 90 | 215 | 269 | 2.96e-11 | 63.2 |
MS.gene94669.t1 | AT1G14600 | 55.932 | 59 | 23 | 1 | 33 | 91 | 25 | 80 | 3.14e-11 | 62.4 |
MS.gene94669.t1 | AT1G32240 | 53.448 | 58 | 24 | 1 | 33 | 90 | 215 | 269 | 3.40e-11 | 63.2 |
Find 67 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGTGCCTAGTTTCTTATTAT+AGG | 0.220382 | 7.3:-36680044 | None:intergenic |
ACCAAACCTGGAACCTTTCT+TGG | 0.254138 | 7.3:-36680102 | MS.gene94669:CDS |
TACGATATAGAACAGAAATT+TGG | 0.266828 | 7.3:+36680981 | None:intergenic |
AGTGGATTCCGGAATCAATT+TGG | 0.281870 | 7.3:+36681144 | None:intergenic |
CGATGTTCACCAAGGTAAAT+TGG | 0.300095 | 7.3:+36683369 | None:intergenic |
TGGAGGCTGTAAATAGGCTT+GGG | 0.332347 | 7.3:-36683144 | MS.gene94669:CDS |
TCTTTGTGGAGGCTGTAAAT+AGG | 0.333114 | 7.3:-36683150 | MS.gene94669:CDS |
AACTTACTTGTAGTGGATTC+CGG | 0.334653 | 7.3:+36681133 | None:intergenic |
TCCAAGAAAGGTTCCAGGTT+TGG | 0.364366 | 7.3:+36680101 | None:intergenic |
CAGGATCTCCAAATTGATTC+CGG | 0.386371 | 7.3:-36681152 | MS.gene94669:CDS |
GACCCCAAGAGTTCAGTTAT+GGG | 0.387702 | 7.3:-36683241 | MS.gene94669:CDS |
ACACGTCAAAAGCCACTTGC+AGG | 0.391889 | 7.3:-36682043 | MS.gene94669:intron |
AGACCCCAAGAGTTCAGTTA+TGG | 0.391899 | 7.3:-36683242 | MS.gene94669:CDS |
GTGGAGGCTGTAAATAGGCT+TGG | 0.397815 | 7.3:-36683145 | MS.gene94669:CDS |
CTGACTCCAAGAAAGGTTCC+AGG | 0.408019 | 7.3:+36680096 | None:intergenic |
GGAAAGTACCTAGACAGAAT+TGG | 0.410201 | 7.3:-36680337 | MS.gene94669:CDS |
TTGGATATGTTCAGAAATAC+AGG | 0.429982 | 7.3:-36681171 | MS.gene94669:intron |
GGAACCCATAACTGAACTCT+TGG | 0.435757 | 7.3:+36683237 | None:intergenic |
GAACCTTTCTTGGAGTCAGC+TGG | 0.440714 | 7.3:-36680092 | MS.gene94669:CDS |
ATTCCTTTCAGTATACCTCT+TGG | 0.449845 | 7.3:+36682099 | None:intergenic |
CAGAATTCAGCAACCAAACC+TGG | 0.457761 | 7.3:-36680114 | MS.gene94669:CDS |
GTTGCTGAATTCTGAGGTAG+TGG | 0.463218 | 7.3:+36680123 | None:intergenic |
AACTAGGCACCAAAGGTGAT+TGG | 0.478600 | 7.3:+36680056 | None:intergenic |
CAGCCTCCACAAAGAGATCA+TGG | 0.480797 | 7.3:+36683158 | None:intergenic |
GGTGTTGCTTTACCAACAAA+AGG | 0.483141 | 7.3:+36680271 | None:intergenic |
CAGCCAGCTGACTCCAAGAA+AGG | 0.496169 | 7.3:+36680089 | None:intergenic |
AGCAACCTACCAATCACCTT+TGG | 0.500347 | 7.3:-36680065 | MS.gene94669:CDS |
GAACCCATAACTGAACTCTT+GGG | 0.503172 | 7.3:+36683238 | None:intergenic |
ACAACTCCATGATCTCTTTG+TGG | 0.503279 | 7.3:-36683164 | MS.gene94669:CDS |
ACTGAAAGGAATGAAGGCTA+TGG | 0.503485 | 7.3:-36682088 | MS.gene94669:CDS |
AAAAGAAGTTCTTCAAATGC+AGG | 0.504915 | 7.3:-36680868 | MS.gene94669:CDS |
TACTTTGTCCAATTCTGTCT+AGG | 0.510514 | 7.3:+36680329 | None:intergenic |
CTGAAAGGAATGAAGGCTAT+GGG | 0.510802 | 7.3:-36682087 | MS.gene94669:CDS |
CACACAAAGAACGCTTAAGA+TGG | 0.520735 | 7.3:-36683192 | MS.gene94669:CDS |
TCCAACAGCGAGAAAGCAAA+AGG | 0.522954 | 7.3:-36680191 | MS.gene94669:CDS |
ATGGGTTCCACTCGCTCAGA+TGG | 0.537642 | 7.3:-36683223 | MS.gene94669:CDS |
AGGTATACTGAAAGGAATGA+AGG | 0.543020 | 7.3:-36682094 | MS.gene94669:CDS |
CTAATGAAGCCAATTTACCT+TGG | 0.546782 | 7.3:-36683378 | MS.gene94669:CDS |
TTCAGATTCCTCAGAAAGAG+AGG | 0.548354 | 7.3:+36680243 | None:intergenic |
ACCTCTTCCCTCTCTTTCTG+AGG | 0.553887 | 7.3:-36680251 | MS.gene94669:CDS |
GAGGCTGTAAATAGGCTTGG+GGG | 0.562654 | 7.3:-36683142 | MS.gene94669:CDS |
AATAAGAAACTAGGCACCAA+AGG | 0.567599 | 7.3:+36680049 | None:intergenic |
TCCTCAGAAAGAGAGGGAAG+AGG | 0.572927 | 7.3:+36680250 | None:intergenic |
GGAGGCTGTAAATAGGCTTG+GGG | 0.579180 | 7.3:-36683143 | MS.gene94669:CDS |
AAAACCTATAATAAGAAACT+AGG | 0.579659 | 7.3:+36680040 | None:intergenic |
TCTTAAGCGTTCTTTGTGTG+TGG | 0.591577 | 7.3:+36683195 | None:intergenic |
GGTTTGGTTGCTGAATTCTG+AGG | 0.596881 | 7.3:+36680117 | None:intergenic |
AGTTCTTCAAATGCAGGCAG+AGG | 0.605187 | 7.3:-36680862 | MS.gene94669:CDS |
ATCCTTTAAAACACAATCCG+AGG | 0.606368 | 7.3:-36680221 | MS.gene94669:CDS |
GATCCTAGTTCAAAACCTGT+AGG | 0.608319 | 7.3:+36680148 | None:intergenic |
GATCATCTATGAAGGAGGAA+AGG | 0.610342 | 7.3:-36681033 | MS.gene94669:intron |
GGCAGAGCCATCTGAGCGAG+TGG | 0.612768 | 7.3:+36683216 | None:intergenic |
AGGCACCAAAGGTGATTGGT+AGG | 0.616341 | 7.3:+36680060 | None:intergenic |
ACGCATGAGTGATAAAGTTG+AGG | 0.616870 | 7.3:-36680832 | MS.gene94669:intron |
ACACCAAGAGGTATACTGAA+AGG | 0.630195 | 7.3:-36682102 | MS.gene94669:CDS |
TGAAAGGAATGAAGGCTATG+GGG | 0.636336 | 7.3:-36682086 | MS.gene94669:CDS |
GAAAGGAATGAAGGCTATGG+GGG | 0.636670 | 7.3:-36682085 | MS.gene94669:CDS |
TCAGATTCCTCAGAAAGAGA+GGG | 0.643590 | 7.3:+36680244 | None:intergenic |
AAGCGGAAAATGGAAGCACA+AGG | 0.651592 | 7.3:-36680358 | MS.gene94669:CDS |
AACCCATAACTGAACTCTTG+GGG | 0.651760 | 7.3:+36683239 | None:intergenic |
ACTCCATGATCTCTTTGTGG+AGG | 0.654213 | 7.3:-36683161 | MS.gene94669:CDS |
CTTGGTGAACATCGCCACGA+TGG | 0.654876 | 7.3:-36683360 | MS.gene94669:intron |
TTGTCAGGGGCAACACCAAG+AGG | 0.658933 | 7.3:-36682114 | MS.gene94669:intron |
GGTGGAGAAGAACCTGCAAG+TGG | 0.679561 | 7.3:+36682031 | None:intergenic |
AGGCTGTAAATAGGCTTGGG+GGG | 0.689265 | 7.3:-36683141 | MS.gene94669:CDS |
CATCGTGGCGATGTTCACCA+AGG | 0.700205 | 7.3:+36683361 | None:intergenic |
AGACATAGAATTAACCATCG+TGG | 0.739062 | 7.3:+36683346 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAAAAAAAAAAAAAAGTGA+AGG | + | chr7.3:36681143-36681162 | None:intergenic | 10.0% |
!!! | ATATAGTCTTTATAATTTTT+AGG | - | chr7.3:36682857-36682876 | MS.gene94669:intron | 10.0% |
!!! | TTTAAATACAGTTTTTTTTT+TGG | + | chr7.3:36681973-36681992 | None:intergenic | 10.0% |
!!! | TTTTTAAATTATTAGTTCAA+TGG | - | chr7.3:36680573-36680592 | MS.gene94669:intron | 10.0% |
!! | AATATGCTAATTAGTAAAAA+TGG | - | chr7.3:36681899-36681918 | MS.gene94669:intron | 15.0% |
!! | ATTTCTTAAACAAAAAGAAA+AGG | + | chr7.3:36680719-36680738 | None:intergenic | 15.0% |
!! | GTTATAATTTCAATTGAATT+TGG | + | chr7.3:36682358-36682377 | None:intergenic | 15.0% |
!! | TTAATCAAATACTATTACTT+TGG | + | chr7.3:36682323-36682342 | None:intergenic | 15.0% |
!! | TTACTTTATATAAGTCAATT+TGG | + | chr7.3:36682163-36682182 | None:intergenic | 15.0% |
!!! | AATTTTATGACCAATATAAA+TGG | + | chr7.3:36681414-36681433 | None:intergenic | 15.0% |
!!! | AGTAAAAATTTTGTATCATT+TGG | - | chr7.3:36683018-36683037 | MS.gene94669:intron | 15.0% |
!!! | ATTTTAGTAACCAATTTTTT+GGG | - | chr7.3:36680147-36680166 | MS.gene94669:CDS | 15.0% |
!!! | ATTTTATGACCAATATAAAT+GGG | + | chr7.3:36681413-36681432 | None:intergenic | 15.0% |
!!! | TATGATATTTTAATTTGTCA+AGG | - | chr7.3:36682769-36682788 | MS.gene94669:intron | 15.0% |
!! | AAAAAAAAAAAAAGTGAAGG+AGG | + | chr7.3:36681140-36681159 | None:intergenic | 20.0% |
!! | AAAATTGGTTACTAAAATGA+AGG | + | chr7.3:36680145-36680164 | None:intergenic | 20.0% |
!! | AATTTGAATATTGTTTGTCA+GGG | - | chr7.3:36681292-36681311 | MS.gene94669:intron | 20.0% |
!! | GTTTAAGAAATGTTCATATT+TGG | - | chr7.3:36680728-36680747 | MS.gene94669:intron | 20.0% |
!! | TACAAAAAATGACACTAATA+GGG | + | chr7.3:36680812-36680831 | None:intergenic | 20.0% |
!! | TCTCAAAAAAACTATAATCT+CGG | - | chr7.3:36681999-36682018 | MS.gene94669:intron | 20.0% |
!! | TTCGTAATTCATATAAATGT+GGG | + | chr7.3:36681880-36681899 | None:intergenic | 20.0% |
!! | TTTATATAAGTCAATTTGGA+TGG | + | chr7.3:36682159-36682178 | None:intergenic | 20.0% |
!! | TTTCGTAATTCATATAAATG+TGG | + | chr7.3:36681881-36681900 | None:intergenic | 20.0% |
!!! | AAAGTATTATTAGAACTTAG+TGG | + | chr7.3:36680323-36680342 | None:intergenic | 20.0% |
!!! | ACTTGTATTTCAATTTTCAA+GGG | + | chr7.3:36682198-36682217 | None:intergenic | 20.0% |
!!! | ATCTACTTTAAAATGAAACT+TGG | - | chr7.3:36680912-36680931 | MS.gene94669:intron | 20.0% |
!!! | CATTTTAGTAACCAATTTTT+TGG | - | chr7.3:36680146-36680165 | MS.gene94669:CDS | 20.0% |
!!! | TACTTGTATTTCAATTTTCA+AGG | + | chr7.3:36682199-36682218 | None:intergenic | 20.0% |
!!! | TGATGGATAAAATGTTATTT+TGG | - | chr7.3:36681671-36681690 | MS.gene94669:intron | 20.0% |
!!! | TGATTTGTAAAACTGTTTTA+GGG | + | chr7.3:36681799-36681818 | None:intergenic | 20.0% |
!!! | TTAAAAACTTGTTTGATCAA+AGG | + | chr7.3:36682053-36682072 | None:intergenic | 20.0% |
!!! | TTGATTTGTAAAACTGTTTT+AGG | + | chr7.3:36681800-36681819 | None:intergenic | 20.0% |
! | AAGAAATGTTCATATTTGGA+AGG | - | chr7.3:36680732-36680751 | MS.gene94669:intron | 25.0% |
! | ACAAAAAATGACACTAATAG+GGG | + | chr7.3:36680811-36680830 | None:intergenic | 25.0% |
! | ATCTACAAATTGCAATAAAC+AGG | + | chr7.3:36680355-36680374 | None:intergenic | 25.0% |
! | ATTTGAATATTGTTTGTCAG+GGG | - | chr7.3:36681293-36681312 | MS.gene94669:intron | 25.0% |
! | CAATTTGAATATTGTTTGTC+AGG | - | chr7.3:36681291-36681310 | MS.gene94669:intron | 25.0% |
! | CTCAAAAAAACTATAATCTC+GGG | - | chr7.3:36682000-36682019 | MS.gene94669:intron | 25.0% |
! | CTTTAATGACTATATCCTAT+AGG | + | chr7.3:36682632-36682651 | None:intergenic | 25.0% |
! | GATTGTTGAATAAGATTTGA+TGG | - | chr7.3:36680868-36680887 | MS.gene94669:CDS | 25.0% |
! | GTACAAAAAATGACACTAAT+AGG | + | chr7.3:36680813-36680832 | None:intergenic | 25.0% |
! | TACGATATAGAACAGAAATT+TGG | + | chr7.3:36682442-36682461 | None:intergenic | 25.0% |
! | TTCAATGGAAATATGTCAAA+TGG | - | chr7.3:36680588-36680607 | MS.gene94669:intron | 25.0% |
! | TTTGCTAAAAAATAAGGACA+GGG | + | chr7.3:36681848-36681867 | None:intergenic | 25.0% |
!! | AGAATTGTAGCAAGTTTTTA+AGG | - | chr7.3:36682883-36682902 | MS.gene94669:intron | 25.0% |
!! | ATTTTGTATCATTTGGTTGA+AGG | - | chr7.3:36683025-36683044 | MS.gene94669:intron | 25.0% |
!! | GAATTGTAGCAAGTTTTTAA+GGG | - | chr7.3:36682884-36682903 | MS.gene94669:intron | 25.0% |
!! | TAAGTTGTATGATTTTCATC+CGG | - | chr7.3:36680940-36680959 | MS.gene94669:intron | 25.0% |
!! | TGATCTTATACGATTTTTGA+TGG | - | chr7.3:36681654-36681673 | MS.gene94669:intron | 25.0% |
!! | TTTTTCTTAAGTCAAGTCAA+AGG | + | chr7.3:36681049-36681068 | None:intergenic | 25.0% |
!!! | CAATTTTCAAGGGAATTATT+TGG | + | chr7.3:36682188-36682207 | None:intergenic | 25.0% |
!!! | GTTTGGTTTGCTAAAAAATA+AGG | + | chr7.3:36681854-36681873 | None:intergenic | 25.0% |
AAAAGAAGTTCTTCAAATGC+AGG | - | chr7.3:36682552-36682571 | MS.gene94669:intron | 30.0% | |
AAACTAAGCTCTTTGATACT+TGG | - | chr7.3:36681073-36681092 | MS.gene94669:intron | 30.0% | |
AAAGTCAACGAAAAAGTCAA+CGG | + | chr7.3:36681253-36681272 | None:intergenic | 30.0% | |
ACAACACATGACAAATTTGT+TGG | - | chr7.3:36681617-36681636 | MS.gene94669:intron | 30.0% | |
AGACAAAACAAAACAACACA+AGG | - | chr7.3:36681590-36681609 | MS.gene94669:intron | 30.0% | |
AGTCAAAAACTTACTTGTAG+TGG | + | chr7.3:36682297-36682316 | None:intergenic | 30.0% | |
CAGATTCAAACTGTTTAAAG+CGG | - | chr7.3:36680505-36680524 | MS.gene94669:intron | 30.0% | |
CCATGATTTAAAAACCGAAT+TGG | - | chr7.3:36680408-36680427 | MS.gene94669:intron | 30.0% | |
CTTAATTGAATCGAGATAGA+TGG | - | chr7.3:36680765-36680784 | MS.gene94669:intron | 30.0% | |
GAACATGTGTAATTTCATAG+AGG | - | chr7.3:36682968-36682987 | MS.gene94669:intron | 30.0% | |
GATTTAAAAACCGAATTGGA+CGG | - | chr7.3:36680412-36680431 | MS.gene94669:intron | 30.0% | |
GTAAATGTAGCAGACAAATT+TGG | + | chr7.3:36682830-36682849 | None:intergenic | 30.0% | |
GTACTCTAACCAATGAAAAA+TGG | - | chr7.3:36682944-36682963 | MS.gene94669:intron | 30.0% | |
TTATGACCAATATAAATGGG+TGG | + | chr7.3:36681410-36681429 | None:intergenic | 30.0% | |
TTATTTGAACAGTTTCATCG+TGG | - | chr7.3:36680475-36680494 | MS.gene94669:intron | 30.0% | |
TTGGATATGTTCAGAAATAC+AGG | - | chr7.3:36682249-36682268 | MS.gene94669:intron | 30.0% | |
TTTATAGTGTTTGAGCCTAT+AGG | - | chr7.3:36682614-36682633 | MS.gene94669:intron | 30.0% | |
! | AATGAGAATGTTTTTCCTAC+AGG | - | chr7.3:36683257-36683276 | MS.gene94669:intron | 30.0% |
! | ATTTTAGACAACTTGTACGT+GGG | - | chr7.3:36681695-36681714 | MS.gene94669:intron | 30.0% |
! | CCAATTCGGTTTTTAAATCA+TGG | + | chr7.3:36680411-36680430 | None:intergenic | 30.0% |
! | GTTTGCTAAAAAATAAGGAC+AGG | + | chr7.3:36681849-36681868 | None:intergenic | 30.0% |
!! | ACATGTTCTCCATTTTTCAT+TGG | + | chr7.3:36682956-36682975 | None:intergenic | 30.0% |
!! | TACTGAAGGGTACTAAAATA+GGG | - | chr7.3:36680618-36680637 | MS.gene94669:intron | 30.0% |
!! | TATTTTAGACAACTTGTACG+TGG | - | chr7.3:36681694-36681713 | MS.gene94669:intron | 30.0% |
!!! | ATTTTAAAGTAGATTTGCCG+AGG | + | chr7.3:36680906-36680925 | None:intergenic | 30.0% |
!!! | GTTTTAGGGATATGAAAAAC+TGG | + | chr7.3:36681785-36681804 | None:intergenic | 30.0% |
!!! | TTGTCATCAATTTTGATTGC+CGG | + | chr7.3:36680962-36680981 | None:intergenic | 30.0% |
AAAAAACTATAATCTCGGGC+TGG | - | chr7.3:36682004-36682023 | MS.gene94669:intron | 35.0% | |
AAAAAGCTTGAAGCGGAAAA+TGG | - | chr7.3:36683052-36683071 | MS.gene94669:intron | 35.0% | |
AAATGGTCAATCCTACTGAA+GGG | - | chr7.3:36680605-36680624 | MS.gene94669:intron | 35.0% | |
AATAAGAAACTAGGCACCAA+AGG | + | chr7.3:36683374-36683393 | None:intergenic | 35.0% | |
AGACATAGAATTAACCATCG+TGG | + | chr7.3:36680077-36680096 | None:intergenic | 35.0% | |
AGGTATACTGAAAGGAATGA+AGG | - | chr7.3:36681326-36681345 | MS.gene94669:intron | 35.0% | |
AGGTTCAAAAAAGCTTGAAG+CGG | - | chr7.3:36683045-36683064 | MS.gene94669:intron | 35.0% | |
ATTCCTTTCAGTATACCTCT+TGG | + | chr7.3:36681324-36681343 | None:intergenic | 35.0% | |
CATTGAACATATGAGACATC+CGG | + | chr7.3:36680543-36680562 | None:intergenic | 35.0% | |
GATGACTAATATGCTCATCT+TGG | - | chr7.3:36682230-36682249 | MS.gene94669:intron | 35.0% | |
GCAAAAAAACTCCAGTTGTA+CGG | + | chr7.3:36681826-36681845 | None:intergenic | 35.0% | |
TAATTCATTCACGACTCAAC+TGG | + | chr7.3:36680443-36680462 | None:intergenic | 35.0% | |
TACTTTGTCCAATTCTGTCT+AGG | + | chr7.3:36683094-36683113 | None:intergenic | 35.0% | |
TCTTCTCCACCCATTTATAT+TGG | - | chr7.3:36681401-36681420 | MS.gene94669:intron | 35.0% | |
TGTTCCTTGATCATCTATGA+AGG | - | chr7.3:36682379-36682398 | MS.gene94669:intron | 35.0% | |
TTAGGGATATGAAAAACTGG+TGG | + | chr7.3:36681782-36681801 | None:intergenic | 35.0% | |
! | AAAACTTGCAAGCCTTTTGT+TGG | - | chr7.3:36683137-36683156 | MS.gene94669:CDS | 35.0% |
! | CGCTTTAAACAGTTTGAATC+TGG | + | chr7.3:36680507-36680526 | None:intergenic | 35.0% |
!! | AACTTACTTGTAGTGGATTC+CGG | + | chr7.3:36682290-36682309 | None:intergenic | 35.0% |
!! | ATCCTTTAAAACACAATCCG+AGG | - | chr7.3:36683199-36683218 | MS.gene94669:CDS | 35.0% |
!! | CTACTGAAGGGTACTAAAAT+AGG | - | chr7.3:36680617-36680636 | MS.gene94669:intron | 35.0% |
!! | TTCCTCGGATTGTGTTTTAA+AGG | + | chr7.3:36683204-36683223 | None:intergenic | 35.0% |
!!! | CTATTTTAGTACCCTTCAGT+AGG | + | chr7.3:36680619-36680638 | None:intergenic | 35.0% |
!!! | TTTCCTACAGGTTTTGAACT+AGG | - | chr7.3:36683269-36683288 | MS.gene94669:intron | 35.0% |
AAAGCGGTTGAACTATGATC+CGG | - | chr7.3:36680521-36680540 | MS.gene94669:intron | 40.0% | |
AACCCATAACTGAACTCTTG+GGG | + | chr7.3:36680184-36680203 | None:intergenic | 40.0% | |
ACAACTCCATGATCTCTTTG+TGG | - | chr7.3:36680256-36680275 | MS.gene94669:CDS | 40.0% | |
ACGCATGAGTGATAAAGTTG+AGG | - | chr7.3:36682588-36682607 | MS.gene94669:intron | 40.0% | |
ACTGAAAGGAATGAAGGCTA+TGG | - | chr7.3:36681332-36681351 | MS.gene94669:intron | 40.0% | |
AGTGGCAAAAACTCACTATC+TGG | + | chr7.3:36680305-36680324 | None:intergenic | 40.0% | |
ATCCGAAAAACAGTCAGTAC+TGG | - | chr7.3:36681554-36681573 | MS.gene94669:intron | 40.0% | |
CAAATCAAACACCGTACAAC+TGG | - | chr7.3:36681812-36681831 | MS.gene94669:intron | 40.0% | |
CAAATGGTCAATCCTACTGA+AGG | - | chr7.3:36680604-36680623 | MS.gene94669:intron | 40.0% | |
CACACAAAGAACGCTTAAGA+TGG | - | chr7.3:36680228-36680247 | MS.gene94669:CDS | 40.0% | |
CATATAAATGTGGGTGCGTT+TGG | + | chr7.3:36681871-36681890 | None:intergenic | 40.0% | |
CGATGTTCACCAAGGTAAAT+TGG | + | chr7.3:36680054-36680073 | None:intergenic | 40.0% | |
CTGAAAGAGGCCCAAAAAAT+TGG | + | chr7.3:36680160-36680179 | None:intergenic | 40.0% | |
CTGAAAGGAATGAAGGCTAT+GGG | - | chr7.3:36681333-36681352 | MS.gene94669:intron | 40.0% | |
GAACCCATAACTGAACTCTT+GGG | + | chr7.3:36680185-36680204 | None:intergenic | 40.0% | |
GACACTAATAGGGGTTTATG+TGG | + | chr7.3:36680802-36680821 | None:intergenic | 40.0% | |
GATCATCTATGAAGGAGGAA+AGG | - | chr7.3:36682387-36682406 | MS.gene94669:intron | 40.0% | |
GATCCTAGTTCAAAACCTGT+AGG | + | chr7.3:36683275-36683294 | None:intergenic | 40.0% | |
TCAGATTCCTCAGAAAGAGA+GGG | + | chr7.3:36683179-36683198 | None:intergenic | 40.0% | |
TCCTCCTTCATAGATGATCA+AGG | + | chr7.3:36682386-36682405 | None:intergenic | 40.0% | |
TCCTTGATCATCTATGAAGG+AGG | - | chr7.3:36682382-36682401 | MS.gene94669:intron | 40.0% | |
TCTTAAGCGTTCTTTGTGTG+TGG | + | chr7.3:36680228-36680247 | None:intergenic | 40.0% | |
TCTTTGTGGAGGCTGTAAAT+AGG | - | chr7.3:36680270-36680289 | MS.gene94669:CDS | 40.0% | |
TGAAAGGAATGAAGGCTATG+GGG | - | chr7.3:36681334-36681353 | MS.gene94669:intron | 40.0% | |
TGACAACGTAAATGCATGAC+TGG | - | chr7.3:36680976-36680995 | MS.gene94669:intron | 40.0% | |
TTCAGATTCCTCAGAAAGAG+AGG | + | chr7.3:36683180-36683199 | None:intergenic | 40.0% | |
! | ACACCAAGAGGTATACTGAA+AGG | - | chr7.3:36681318-36681337 | MS.gene94669:intron | 40.0% |
! | AGTGGATTCCGGAATCAATT+TGG | + | chr7.3:36682279-36682298 | None:intergenic | 40.0% |
! | CAGGATCTCCAAATTGATTC+CGG | - | chr7.3:36682268-36682287 | MS.gene94669:intron | 40.0% |
!! | GGAAAGTACCTAGACAGAAT+TGG | - | chr7.3:36683083-36683102 | MS.gene94669:intron | 40.0% |
!! | GGTGTTGCTTTACCAACAAA+AGG | + | chr7.3:36683152-36683171 | None:intergenic | 40.0% |
!!! | GTCCAGTACTGACTGTTTTT+CGG | + | chr7.3:36681559-36681578 | None:intergenic | 40.0% |
AACTAGGCACCAAAGGTGAT+TGG | + | chr7.3:36683367-36683386 | None:intergenic | 45.0% | |
ACCAAACCTGGAACCTTTCT+TGG | - | chr7.3:36683318-36683337 | MS.gene94669:intron | 45.0% | |
ACGTGGGACAAAAAGTTGTG+CGG | - | chr7.3:36681711-36681730 | MS.gene94669:intron | 45.0% | |
ACTCCATGATCTCTTTGTGG+AGG | - | chr7.3:36680259-36680278 | MS.gene94669:CDS | 45.0% | |
ACTGGTTGAACCGTCCAATT+CGG | + | chr7.3:36680425-36680444 | None:intergenic | 45.0% | |
AGACCCCAAGAGTTCAGTTA+TGG | - | chr7.3:36680178-36680197 | MS.gene94669:CDS | 45.0% | |
AGCAACCTACCAATCACCTT+TGG | - | chr7.3:36683355-36683374 | MS.gene94669:intron | 45.0% | |
AGTTCTTCAAATGCAGGCAG+AGG | - | chr7.3:36682558-36682577 | MS.gene94669:intron | 45.0% | |
CAAAAAGTTGTGCGGTGGTT+TGG | - | chr7.3:36681719-36681738 | MS.gene94669:intron | 45.0% | |
CAGAATTCAGCAACCAAACC+TGG | - | chr7.3:36683306-36683325 | MS.gene94669:intron | 45.0% | |
GAAAGGAATGAAGGCTATGG+GGG | - | chr7.3:36681335-36681354 | MS.gene94669:intron | 45.0% | |
GACCCCAAGAGTTCAGTTAT+GGG | - | chr7.3:36680179-36680198 | MS.gene94669:CDS | 45.0% | |
GGAACCCATAACTGAACTCT+TGG | + | chr7.3:36680186-36680205 | None:intergenic | 45.0% | |
TCCAACAGCGAGAAAGCAAA+AGG | - | chr7.3:36683229-36683248 | MS.gene94669:CDS | 45.0% | |
TCCAAGAAAGGTTCCAGGTT+TGG | + | chr7.3:36683322-36683341 | None:intergenic | 45.0% | |
TGGAGGCTGTAAATAGGCTT+GGG | - | chr7.3:36680276-36680295 | MS.gene94669:CDS | 45.0% | |
! | AAGCGGAAAATGGAAGCACA+AGG | - | chr7.3:36683062-36683081 | MS.gene94669:intron | 45.0% |
! | ACCTTTTGCTTTCTCGCTGT+TGG | + | chr7.3:36683233-36683252 | None:intergenic | 45.0% |
! | CGCTGTTGGATGTTTTTCCT+CGG | + | chr7.3:36683219-36683238 | None:intergenic | 45.0% |
! | GGTTTGGTTGCTGAATTCTG+AGG | + | chr7.3:36683306-36683325 | None:intergenic | 45.0% |
!! | GTTGCTGAATTCTGAGGTAG+TGG | + | chr7.3:36683300-36683319 | None:intergenic | 45.0% |
!! | ATATATTTATTACTTATATA+AGG | - | chr7.3:36682922-36682941 | MS.gene94669:intron | 5.0% |
ACACGTCAAAAGCCACTTGC+AGG | - | chr7.3:36681377-36681396 | MS.gene94669:intron | 50.0% | |
ACCTCTTCCCTCTCTTTCTG+AGG | - | chr7.3:36683169-36683188 | MS.gene94669:CDS | 50.0% | |
AGGCACCAAAGGTGATTGGT+AGG | + | chr7.3:36683363-36683382 | None:intergenic | 50.0% | |
AGGCTGTAAATAGGCTTGGG+GGG | - | chr7.3:36680279-36680298 | MS.gene94669:CDS | 50.0% | |
CAGCCTCCACAAAGAGATCA+TGG | + | chr7.3:36680265-36680284 | None:intergenic | 50.0% | |
CTGACTCCAAGAAAGGTTCC+AGG | + | chr7.3:36683327-36683346 | None:intergenic | 50.0% | |
GAACCTTTCTTGGAGTCAGC+TGG | - | chr7.3:36683328-36683347 | MS.gene94669:intron | 50.0% | |
GAACTCTTGGGGTCTGAAAG+AGG | + | chr7.3:36680173-36680192 | None:intergenic | 50.0% | |
GAGGCTGTAAATAGGCTTGG+GGG | - | chr7.3:36680278-36680297 | MS.gene94669:CDS | 50.0% | |
GGAGGCTGTAAATAGGCTTG+GGG | - | chr7.3:36680277-36680296 | MS.gene94669:CDS | 50.0% | |
GTGGAGGCTGTAAATAGGCT+TGG | - | chr7.3:36680275-36680294 | MS.gene94669:CDS | 50.0% | |
TCCTCAGAAAGAGAGGGAAG+AGG | + | chr7.3:36683173-36683192 | None:intergenic | 50.0% | |
TGGGACAAAAAGTTGTGCGG+TGG | - | chr7.3:36681714-36681733 | MS.gene94669:intron | 50.0% | |
ATGGGTTCCACTCGCTCAGA+TGG | - | chr7.3:36680197-36680216 | MS.gene94669:CDS | 55.0% | |
CATCGTGGCGATGTTCACCA+AGG | + | chr7.3:36680062-36680081 | None:intergenic | 55.0% | |
CTTGGTGAACATCGCCACGA+TGG | - | chr7.3:36680060-36680079 | MS.gene94669:CDS | 55.0% | |
GATGGCTCGTGTTCTGACCT+CGG | - | chr7.3:36680886-36680905 | MS.gene94669:intron | 55.0% | |
GGTGGAGAAGAACCTGCAAG+TGG | + | chr7.3:36681392-36681411 | None:intergenic | 55.0% | |
TTGTCAGGGGCAACACCAAG+AGG | - | chr7.3:36681306-36681325 | MS.gene94669:intron | 55.0% | |
! | CAGCCAGCTGACTCCAAGAA+AGG | + | chr7.3:36683334-36683353 | None:intergenic | 55.0% |
!! | AGTTGTGCGGTGGTTTGGTG+AGG | - | chr7.3:36681724-36681743 | MS.gene94669:intron | 55.0% |
!! | GTTGTGCGGTGGTTTGGTGA+GGG | - | chr7.3:36681725-36681744 | MS.gene94669:intron | 55.0% |
GGCAGAGCCATCTGAGCGAG+TGG | + | chr7.3:36680207-36680226 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 36680045 | 36683397 | 36680045 | ID=MS.gene94669 |
chr7.3 | mRNA | 36680045 | 36683397 | 36680045 | ID=MS.gene94669.t1;Parent=MS.gene94669 |
chr7.3 | exon | 36683361 | 36683397 | 36683361 | ID=MS.gene94669.t1.exon1;Parent=MS.gene94669.t1 |
chr7.3 | CDS | 36683361 | 36683397 | 36683361 | ID=cds.MS.gene94669.t1;Parent=MS.gene94669.t1 |
chr7.3 | exon | 36683134 | 36683262 | 36683134 | ID=MS.gene94669.t1.exon2;Parent=MS.gene94669.t1 |
chr7.3 | CDS | 36683134 | 36683262 | 36683134 | ID=cds.MS.gene94669.t1;Parent=MS.gene94669.t1 |
chr7.3 | exon | 36682044 | 36682129 | 36682044 | ID=MS.gene94669.t1.exon3;Parent=MS.gene94669.t1 |
chr7.3 | CDS | 36682044 | 36682129 | 36682044 | ID=cds.MS.gene94669.t1;Parent=MS.gene94669.t1 |
chr7.3 | exon | 36681140 | 36681179 | 36681140 | ID=MS.gene94669.t1.exon4;Parent=MS.gene94669.t1 |
chr7.3 | CDS | 36681140 | 36681179 | 36681140 | ID=cds.MS.gene94669.t1;Parent=MS.gene94669.t1 |
chr7.3 | exon | 36680984 | 36681041 | 36680984 | ID=MS.gene94669.t1.exon5;Parent=MS.gene94669.t1 |
chr7.3 | CDS | 36680984 | 36681041 | 36680984 | ID=cds.MS.gene94669.t1;Parent=MS.gene94669.t1 |
chr7.3 | exon | 36680833 | 36680902 | 36680833 | ID=MS.gene94669.t1.exon6;Parent=MS.gene94669.t1 |
chr7.3 | CDS | 36680833 | 36680902 | 36680833 | ID=cds.MS.gene94669.t1;Parent=MS.gene94669.t1 |
chr7.3 | exon | 36680045 | 36680395 | 36680045 | ID=MS.gene94669.t1.exon7;Parent=MS.gene94669.t1 |
chr7.3 | CDS | 36680045 | 36680395 | 36680045 | ID=cds.MS.gene94669.t1;Parent=MS.gene94669.t1 |
Gene Sequence |
Protein sequence |