AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene94836

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94836.t1 MTR_2g064090 95.965 347 13 1 1 347 1 346 0.0 698
MS.gene94836.t1 MTR_3g064580 74.405 168 43 0 1 168 1 168 6.95e-88 278
MS.gene94836.t1 MTR_5g076850 67.368 190 60 2 1 189 1 189 1.38e-86 274
MS.gene94836.t1 MTR_6g477900 72.152 158 43 1 1 158 1 157 2.55e-83 253
MS.gene94836.t1 MTR_5g014300 50.711 211 85 3 1 204 1 199 1.42e-67 216
MS.gene94836.t1 MTR_4g098630 60.000 160 60 2 1 157 1 159 1.79e-63 204
MS.gene94836.t1 MTR_4g101680 54.217 166 72 2 6 170 7 169 7.37e-62 202
MS.gene94836.t1 MTR_2g079990 55.696 158 67 2 1 158 11 165 9.50e-61 199
MS.gene94836.t1 MTR_8g076110 51.176 170 75 3 1 167 1 165 4.01e-60 196
MS.gene94836.t1 MTR_8g059170 53.757 173 73 3 1 168 9 179 4.18e-60 196
MS.gene94836.t1 MTR_1g090723 54.190 179 78 3 8 185 10 185 5.78e-60 202
MS.gene94836.t1 MTR_1g090723 55.307 179 77 3 8 185 10 186 8.99e-60 203
MS.gene94836.t1 MTR_1g090723 54.190 179 78 3 8 185 10 185 9.12e-60 203
MS.gene94836.t1 MTR_4g036030 54.839 155 66 2 6 159 7 158 1.04e-59 196
MS.gene94836.t1 MTR_1g096430 58.170 153 60 2 6 157 7 156 1.79e-59 195
MS.gene94836.t1 MTR_4g081870 55.975 159 65 3 2 157 5 161 2.22e-59 192
MS.gene94836.t1 MTR_0036s0150 53.889 180 79 3 8 186 7 183 2.27e-59 200
MS.gene94836.t1 MTR_1g097300 47.137 227 110 5 4 229 17 234 4.43e-59 200
MS.gene94836.t1 MTR_7g085220 53.939 165 62 4 6 158 8 170 1.17e-58 193
MS.gene94836.t1 MTR_5g021710 55.556 153 64 2 6 157 8 157 1.61e-58 193
MS.gene94836.t1 MTR_1g090720 57.862 159 62 1 5 158 41 199 1.67e-58 196
MS.gene94836.t1 MTR_4g035590 54.902 153 64 2 6 157 8 156 2.81e-58 192
MS.gene94836.t1 MTR_5g041940 56.051 157 64 3 4 157 1 155 3.67e-58 189
MS.gene94836.t1 MTR_2g080010 50.820 183 74 5 5 173 14 194 4.21e-58 192
MS.gene94836.t1 MTR_8g094580 40.217 276 124 8 4 265 5 253 1.11e-57 189
MS.gene94836.t1 MTR_6g012670 56.774 155 62 3 6 158 20 171 1.44e-57 189
MS.gene94836.t1 MTR_5g012080 55.128 156 66 3 6 159 7 160 2.37e-57 190
MS.gene94836.t1 MTR_3g096920 55.000 160 67 3 4 161 5 161 2.55e-57 188
MS.gene94836.t1 MTR_2g062730 53.205 156 68 3 4 157 8 160 4.63e-57 189
MS.gene94836.t1 MTR_5g069030 52.105 190 78 3 6 188 25 208 4.69e-57 196
MS.gene94836.t1 MTR_6g084430 57.143 154 61 2 6 159 5 153 5.27e-57 188
MS.gene94836.t1 MTR_2g078700 59.615 156 58 3 6 158 23 176 6.40e-57 189
MS.gene94836.t1 MTR_3g088110 46.121 232 107 7 4 225 5 228 7.18e-57 186
MS.gene94836.t1 MTR_3g096140 55.333 150 66 1 8 157 9 157 1.20e-56 186
MS.gene94836.t1 MTR_2g064470 56.098 164 68 2 1 164 6 165 1.28e-56 186
MS.gene94836.t1 MTR_8g063550 54.777 157 70 1 1 157 1 156 1.44e-56 187
MS.gene94836.t1 MTR_4g108760 55.000 160 61 3 4 158 15 168 2.14e-56 187
MS.gene94836.t1 MTR_8g063550 54.777 157 70 1 1 157 1 156 2.58e-56 189
MS.gene94836.t1 MTR_2g079990 58.824 136 54 1 1 136 11 144 3.07e-56 187
MS.gene94836.t1 MTR_8g063550 54.777 157 70 1 1 157 1 156 3.38e-56 189
MS.gene94836.t1 MTR_3g093040 52.761 163 66 2 1 158 103 259 4.02e-56 185
MS.gene94836.t1 MTR_3g093050 57.233 159 57 2 5 158 21 173 4.40e-56 192
MS.gene94836.t1 MTR_3g435150 56.051 157 66 2 4 159 14 168 5.64e-56 185
MS.gene94836.t1 MTR_2157s0010 52.000 175 71 4 6 169 8 180 6.00e-56 183
MS.gene94836.t1 MTR_3g093050 57.233 159 57 2 5 158 21 173 6.69e-56 192
MS.gene94836.t1 MTR_3g096140 55.333 150 66 1 8 157 9 157 7.97e-56 186
MS.gene94836.t1 MTR_6g011860 53.704 162 64 4 6 158 15 174 1.25e-54 184
MS.gene94836.t1 MTR_7g005280 54.023 174 69 5 4 175 13 177 2.56e-54 179
MS.gene94836.t1 MTR_6g032770 42.400 250 125 8 3 247 15 250 2.61e-54 182
MS.gene94836.t1 MTR_8g024480 48.503 167 77 3 6 163 15 181 2.92e-54 184
MS.gene94836.t1 MTR_4g089135 49.153 177 64 4 6 158 15 189 3.10e-54 181
MS.gene94836.t1 MTR_3g109340 55.769 156 62 3 5 158 21 171 6.69e-54 181
MS.gene94836.t1 MTR_1g008740 57.595 158 58 6 5 158 26 178 1.07e-53 181
MS.gene94836.t1 MTR_1g008740 57.595 158 58 6 5 158 12 164 1.09e-53 180
MS.gene94836.t1 MTR_8g093580 52.229 157 74 1 1 157 1 156 1.80e-53 183
MS.gene94836.t1 MTR_3g096920 61.538 130 47 2 4 133 5 131 6.15e-53 177
MS.gene94836.t1 MTR_2g093810 49.711 173 74 5 5 170 13 179 6.23e-53 177
MS.gene94836.t1 MTR_3g109340 55.414 157 62 4 5 158 21 172 3.77e-52 176
MS.gene94836.t1 MTR_1g069805 54.194 155 62 3 5 157 9 156 1.13e-51 172
MS.gene94836.t1 MTR_8g467490 50.311 161 68 4 8 158 16 174 2.35e-51 175
MS.gene94836.t1 MTR_7g085260 50.920 163 73 3 4 161 15 175 2.36e-51 175
MS.gene94836.t1 MTR_7g097090 54.902 153 60 3 5 155 9 154 5.19e-51 171
MS.gene94836.t1 MTR_5g040420 50.625 160 68 4 8 158 16 173 9.92e-51 174
MS.gene94836.t1 MTR_3g116070 56.494 154 60 4 6 154 23 174 1.82e-50 172
MS.gene94836.t1 MTR_2g086880 51.899 158 67 2 1 158 13 161 2.53e-50 176
MS.gene94836.t1 MTR_2g086880 51.899 158 67 2 1 158 13 161 3.65e-50 176
MS.gene94836.t1 MTR_4g134460 51.974 152 67 3 8 158 56 202 5.40e-50 173
MS.gene94836.t1 MTR_3g070030 51.875 160 65 3 4 157 17 170 6.69e-50 170
MS.gene94836.t1 MTR_7g100990 49.057 159 74 3 4 157 9 165 7.11e-49 167
MS.gene94836.t1 MTR_7g011130 57.778 135 51 2 9 143 22 150 1.51e-47 164
MS.gene94836.t1 MTR_3g096140 52.206 136 64 1 22 157 2 136 5.03e-46 160
MS.gene94836.t1 MTR_2g068880 46.988 166 73 4 8 159 24 188 6.43e-46 159
MS.gene94836.t1 MTR_2g068920 46.243 173 74 5 8 162 23 194 2.46e-45 157
MS.gene94836.t1 MTR_7g011120 53.571 140 59 2 4 143 6 139 5.43e-44 154
MS.gene94836.t1 MTR_4g075980 43.275 171 83 4 8 172 17 179 9.94e-44 153
MS.gene94836.t1 MTR_8g023840 49.342 152 67 4 6 154 11 155 7.13e-43 153
MS.gene94836.t1 MTR_3g070040 49.669 151 68 3 10 157 12 157 7.11e-42 149
MS.gene94836.t1 MTR_5g090970 44.720 161 76 3 8 157 20 178 1.49e-41 147
MS.gene94836.t1 MTR_5g090970 43.478 161 77 3 8 157 20 177 2.45e-40 144
MS.gene94836.t1 MTR_8g023860 47.368 152 70 4 6 154 12 156 1.48e-39 145
MS.gene94836.t1 MTR_8g023930 43.713 167 80 5 6 169 24 179 1.65e-38 143
MS.gene94836.t1 MTR_8g023900 46.497 157 74 5 6 158 12 162 4.39e-38 142
MS.gene94836.t1 MTR_8g023900 43.503 177 80 7 1 169 184 348 5.36e-37 139
MS.gene94836.t1 MTR_4g052620 44.872 156 80 5 6 155 5 160 2.17e-37 135
MS.gene94836.t1 MTR_8g099750 43.226 155 78 3 6 154 14 164 9.87e-37 132
MS.gene94836.t1 MTR_3g098810 43.210 162 77 4 6 157 14 170 1.65e-35 129
MS.gene94836.t1 MTR_8g094580 36.404 228 100 8 63 276 8 204 7.87e-35 127
MS.gene94836.t1 MTR_3g098810 46.617 133 63 2 6 134 14 142 2.46e-34 124
MS.gene94836.t1 MTR_2g086690 42.405 158 80 6 7 155 5 160 8.01e-34 125
MS.gene94836.t1 MTR_7g105170 40.854 164 86 6 5 158 3 165 3.10e-33 124
MS.gene94836.t1 MTR_8g023880 39.412 170 75 6 5 157 6 164 3.56e-31 119
MS.gene94836.t1 MTR_4g094302 40.881 159 77 4 6 157 11 159 4.46e-30 114
MS.gene94836.t1 MTR_4g094302 44.615 130 60 3 6 133 11 130 6.63e-30 112
MS.gene94836.t1 MTR_7g070140 47.059 102 44 2 56 147 12 113 7.37e-24 95.9
MS.gene94836.t1 MTR_7g083330 33.758 157 97 4 4 159 16 166 7.27e-22 92.0
MS.gene94836.t1 MTR_8g093790 35.897 156 77 7 2 157 6 138 1.53e-19 85.5
MS.gene94836.t1 MTR_7g083360 31.013 158 97 4 2 156 6 154 2.54e-18 81.3
MS.gene94836.t1 MTR_7g083370 31.579 133 87 3 6 137 10 139 1.92e-17 78.6
MS.gene94836.t1 MTR_3g096400 27.439 164 100 4 4 156 5 160 9.27e-16 75.5
MS.gene94836.t1 MTR_7g070150 54.098 61 23 2 98 157 1 57 1.48e-15 71.6
MS.gene94836.t1 MTR_1g087190 63.043 46 16 1 8 52 7 52 7.47e-14 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94836.t1 AT1G54330 50.298 336 120 8 1 333 1 292 1.04e-96 289
MS.gene94836.t1 AT3G17730 77.215 158 35 1 1 158 1 157 1.56e-87 264
MS.gene94836.t1 AT3G03200 73.585 159 42 0 1 159 1 159 1.51e-86 269
MS.gene94836.t1 AT5G17260 72.956 159 43 0 1 159 1 159 8.02e-86 267
MS.gene94836.t1 AT1G65910 71.023 176 47 2 1 176 1 172 8.04e-86 271
MS.gene94836.t1 AT5G46590 57.229 166 69 2 1 164 1 166 4.80e-67 213
MS.gene94836.t1 AT4G17980 59.877 162 60 3 1 158 1 161 8.56e-67 211
MS.gene94836.t1 AT4G17980 59.877 162 60 3 1 158 1 161 1.21e-66 212
MS.gene94836.t1 AT3G10480 47.556 225 108 4 1 216 22 245 4.23e-65 213
MS.gene94836.t1 AT3G10490 56.571 175 70 2 5 173 26 200 6.52e-65 206
MS.gene94836.t1 AT3G10490 46.983 232 111 5 5 225 26 256 2.43e-64 211
MS.gene94836.t1 AT3G10480 47.556 225 107 5 1 216 22 244 8.15e-64 209
MS.gene94836.t1 AT5G46590 59.459 148 59 1 1 147 1 148 3.87e-63 202
MS.gene94836.t1 AT4G27410 57.595 158 64 2 1 158 9 163 6.28e-63 202
MS.gene94836.t1 AT3G10500 59.146 164 65 2 5 168 8 169 2.12e-62 208
MS.gene94836.t1 AT1G32510 55.758 165 66 1 1 158 1 165 5.22e-62 200
MS.gene94836.t1 AT5G04410 59.146 164 65 2 5 168 8 169 1.09e-61 207
MS.gene94836.t1 AT5G66300 54.268 164 72 2 5 167 11 172 1.18e-61 199
MS.gene94836.t1 AT3G15500 57.595 158 62 3 1 157 9 162 4.61e-60 196
MS.gene94836.t1 AT3G10480 48.744 199 68 2 1 165 22 220 1.74e-59 200
MS.gene94836.t1 AT4G27410 52.601 173 66 3 1 158 9 180 3.40e-59 193
MS.gene94836.t1 AT2G18060 53.216 171 73 4 1 167 1 168 6.19e-59 194
MS.gene94836.t1 AT2G18060 53.216 171 73 4 1 167 1 168 6.19e-59 194
MS.gene94836.t1 AT1G52890 56.329 158 64 3 1 157 9 162 9.90e-59 192
MS.gene94836.t1 AT1G71930 56.051 157 63 3 5 159 8 160 1.28e-58 192
MS.gene94836.t1 AT1G71930 56.051 157 63 3 5 159 8 160 1.28e-58 192
MS.gene94836.t1 AT4G10350 57.143 154 62 3 6 157 9 160 1.63e-58 192
MS.gene94836.t1 AT1G33280 49.711 173 82 2 6 177 8 176 5.43e-58 190
MS.gene94836.t1 AT3G04070 48.108 185 75 5 5 170 9 191 7.51e-58 191
MS.gene94836.t1 AT4G35580 57.595 158 56 2 5 157 8 159 1.71e-57 195
MS.gene94836.t1 AT4G35580 57.595 158 56 2 5 157 8 159 1.78e-57 195
MS.gene94836.t1 AT4G35580 57.595 158 56 2 5 157 8 159 1.80e-57 194
MS.gene94836.t1 AT1G62700 54.194 155 67 2 6 159 7 158 1.92e-57 191
MS.gene94836.t1 AT1G62700 54.194 155 67 2 6 159 7 158 1.92e-57 191
MS.gene94836.t1 AT1G69490 55.769 156 64 2 5 157 8 161 2.14e-57 187
MS.gene94836.t1 AT1G12260 52.258 155 70 2 6 159 7 158 2.45e-57 189
MS.gene94836.t1 AT4G36160 55.195 154 65 3 5 157 9 159 3.83e-57 190
MS.gene94836.t1 AT4G36160 55.195 154 65 3 5 157 9 159 3.83e-57 190
MS.gene94836.t1 AT4G36160 55.195 154 65 3 5 157 13 163 4.29e-57 190
MS.gene94836.t1 AT1G12260 52.258 155 70 2 6 159 7 158 4.75e-57 190
MS.gene94836.t1 AT1G33060 56.329 158 58 2 5 157 23 174 6.09e-57 196
MS.gene94836.t1 AT1G33060 56.329 158 58 2 5 157 23 174 6.24e-57 196
MS.gene94836.t1 AT3G18400 56.209 153 63 2 6 158 5 153 9.52e-57 187
MS.gene94836.t1 AT5G39610 56.604 159 58 3 4 157 18 170 1.04e-56 186
MS.gene94836.t1 AT5G61430 36.474 329 170 11 4 321 14 314 1.37e-56 187
MS.gene94836.t1 AT5G07680 56.410 156 65 2 4 158 15 168 2.17e-56 187
MS.gene94836.t1 AT5G07680 56.410 156 65 2 4 158 1 154 2.23e-56 186
MS.gene94836.t1 AT5G08790 56.329 158 62 3 4 157 5 159 3.12e-56 185
MS.gene94836.t1 AT1G76420 58.710 155 58 3 6 158 22 172 3.61e-56 186
MS.gene94836.t1 AT2G24430 57.962 157 58 4 5 158 15 166 4.60e-56 185
MS.gene94836.t1 AT2G24430 57.962 157 58 4 5 158 15 166 4.60e-56 185
MS.gene94836.t1 AT5G53950 59.627 161 60 3 6 163 17 175 6.60e-56 187
MS.gene94836.t1 AT2G46770 42.222 225 96 5 6 217 16 219 1.12e-55 186
MS.gene94836.t1 AT3G04070 44.279 201 75 5 5 170 9 207 2.90e-55 184
MS.gene94836.t1 AT1G56010 55.215 163 68 3 1 160 14 174 3.09e-55 183
MS.gene94836.t1 AT5G62380 51.235 162 75 2 6 166 7 165 3.14e-55 184
MS.gene94836.t1 AT5G62380 51.235 162 75 2 6 166 7 165 3.14e-55 184
MS.gene94836.t1 AT3G29035 57.516 153 62 2 4 155 22 172 5.10e-55 183
MS.gene94836.t1 AT1G34180 52.795 161 74 2 8 168 18 176 8.18e-55 186
MS.gene94836.t1 AT3G15170 48.718 195 86 4 6 197 20 203 2.32e-54 181
MS.gene94836.t1 AT1G34190 47.568 185 89 2 8 185 18 201 2.45e-54 187
MS.gene94836.t1 AT1G01720 56.051 157 63 4 4 157 5 158 2.49e-54 180
MS.gene94836.t1 AT3G12977 53.165 158 72 1 1 158 13 168 2.98e-54 179
MS.gene94836.t1 AT5G63790 54.375 160 66 3 2 157 46 202 4.55e-54 180
MS.gene94836.t1 AT1G79580 51.923 156 69 3 4 157 15 166 4.68e-54 182
MS.gene94836.t1 AT1G79580 51.923 156 69 3 4 157 15 166 4.68e-54 182
MS.gene94836.t1 AT1G79580 51.923 156 69 3 4 157 15 166 4.68e-54 182
MS.gene94836.t1 AT1G79580 51.923 156 69 3 4 157 15 166 4.68e-54 182
MS.gene94836.t1 AT1G79580 51.923 156 69 3 4 157 15 166 4.68e-54 182
MS.gene94836.t1 AT5G63790 54.375 160 66 3 2 157 56 212 5.46e-54 180
MS.gene94836.t1 AT3G15510 49.180 183 72 5 10 180 21 194 6.75e-54 181
MS.gene94836.t1 AT1G34180 52.795 161 74 2 8 168 18 176 7.56e-54 186
MS.gene94836.t1 AT3G49530 42.857 238 107 7 5 227 12 235 1.14e-53 182
MS.gene94836.t1 AT1G32770 49.693 163 70 3 6 157 16 177 1.33e-53 180
MS.gene94836.t1 AT5G24590 53.165 158 72 2 1 157 8 164 1.76e-53 182
MS.gene94836.t1 AT3G49530 42.857 238 107 7 5 227 12 235 1.84e-53 183
MS.gene94836.t1 AT3G61910 49.405 168 66 3 6 157 11 175 2.13e-53 179
MS.gene94836.t1 AT5G64060 51.899 158 75 1 1 158 1 157 2.84e-53 179
MS.gene94836.t1 AT5G09330 35.110 319 169 5 1 289 1 311 3.80e-53 182
MS.gene94836.t1 AT5G09330 35.110 319 169 5 1 289 1 311 3.80e-53 182
MS.gene94836.t1 AT5G09330 35.110 319 169 5 1 289 1 311 3.80e-53 182
MS.gene94836.t1 AT5G09330 35.110 319 169 5 1 289 1 311 3.80e-53 182
MS.gene94836.t1 AT5G09330 35.110 319 169 5 1 289 1 311 3.80e-53 182
MS.gene94836.t1 AT2G33480 54.545 154 64 2 4 157 13 160 4.37e-53 176
MS.gene94836.t1 AT5G18270 55.844 154 64 3 6 157 21 172 7.14e-53 177
MS.gene94836.t1 AT1G77450 52.353 170 76 4 2 169 6 172 1.25e-52 174
MS.gene94836.t1 AT1G61110 52.023 173 64 6 6 163 16 184 1.89e-52 176
MS.gene94836.t1 AT2G33480 54.545 154 62 3 4 157 13 158 1.95e-52 174
MS.gene94836.t1 AT5G18270 55.195 154 65 3 6 157 21 172 2.82e-52 176
MS.gene94836.t1 AT5G39820 45.251 179 74 3 8 164 22 198 6.60e-52 175
MS.gene94836.t1 AT1G34180 49.133 173 74 3 8 168 18 188 1.41e-51 177
MS.gene94836.t1 AT1G26870 50.920 163 68 3 6 158 16 176 9.11e-51 174
MS.gene94836.t1 AT1G34180 49.133 173 74 3 8 168 18 188 1.05e-50 177
MS.gene94836.t1 AT2G02450 51.656 151 67 3 8 157 53 198 2.17e-49 170
MS.gene94836.t1 AT2G02450 51.656 151 67 3 8 157 53 198 2.87e-49 170
MS.gene94836.t1 AT3G04060 53.896 154 67 3 6 157 20 171 5.57e-49 167
MS.gene94836.t1 AT2G27300 52.564 156 65 3 1 156 9 155 8.33e-49 167
MS.gene94836.t1 AT2G43000 50.955 157 72 2 2 158 17 168 9.19e-49 165
MS.gene94836.t1 AT3G44290 50.318 157 69 3 2 158 10 157 6.00e-48 162
MS.gene94836.t1 AT5G13180 54.487 156 62 4 4 157 12 160 9.94e-48 162
MS.gene94836.t1 AT1G32870 53.659 164 72 3 6 168 10 170 1.77e-47 168
MS.gene94836.t1 AT1G32870 53.659 164 72 3 6 168 10 170 1.92e-47 168
MS.gene94836.t1 AT1G32870 53.659 164 72 3 6 168 46 206 3.67e-47 168
MS.gene94836.t1 AT3G44290 50.318 157 69 3 2 158 10 157 3.86e-47 163
MS.gene94836.t1 AT1G52880 51.875 160 64 4 10 158 21 178 1.73e-46 160
MS.gene94836.t1 AT4G28530 50.877 171 57 6 6 157 10 172 2.13e-46 161
MS.gene94836.t1 AT5G22290 48.052 154 72 3 1 154 16 161 3.46e-46 160
MS.gene94836.t1 AT2G17040 45.223 157 75 3 8 161 8 156 5.64e-44 153
MS.gene94836.t1 AT5G04395 45.098 153 70 2 2 140 24 176 1.14e-41 144
MS.gene94836.t1 AT3G12910 45.833 168 72 5 8 159 23 187 5.70e-41 145
MS.gene94836.t1 AT1G56010 61.000 100 37 1 63 160 8 107 3.41e-36 132
MS.gene94836.t1 AT4G01520 40.385 156 82 4 4 154 2 151 1.38e-34 129
MS.gene94836.t1 AT5G61430 33.333 270 143 11 63 321 8 251 2.20e-34 127
MS.gene94836.t1 AT4G10350 57.292 96 38 2 63 157 20 113 7.15e-34 127
MS.gene94836.t1 AT3G12977 58.947 95 39 0 63 157 20 114 3.31e-33 123
MS.gene94836.t1 AT4G01540 39.735 151 80 4 9 154 7 151 7.01e-32 123
MS.gene94836.t1 AT4G01540 39.735 151 80 4 9 154 7 151 8.08e-32 124
MS.gene94836.t1 AT4G01540 39.735 151 80 4 9 154 7 151 8.52e-32 124
MS.gene94836.t1 AT4G01540 39.735 151 80 4 9 154 7 151 1.25e-31 124
MS.gene94836.t1 AT2G33480 56.842 95 40 1 63 157 10 103 1.99e-31 118
MS.gene94836.t1 AT5G22380 35.961 203 115 7 9 196 8 210 6.24e-31 117
MS.gene94836.t1 AT4G01550 40.523 153 81 3 9 157 7 153 7.93e-31 122
MS.gene94836.t1 AT3G44350 38.854 157 92 4 6 158 5 161 3.19e-30 115
MS.gene94836.t1 AT4G28530 48.855 131 45 5 6 117 10 137 3.20e-29 115
MS.gene94836.t1 AT3G04420 34.518 197 113 6 4 190 1 191 3.42e-29 114
MS.gene94836.t1 AT1G02230 38.462 156 83 6 4 154 1 148 1.16e-28 114
MS.gene94836.t1 AT3G04420 34.518 197 113 6 4 190 1 191 1.41e-28 114
MS.gene94836.t1 AT5G64530 41.667 132 61 4 4 133 1 118 1.53e-27 106
MS.gene94836.t1 AT5G64530 41.667 132 61 4 4 133 1 118 3.74e-27 106
MS.gene94836.t1 AT3G44350 36.538 156 95 4 6 157 5 160 3.30e-26 102
MS.gene94836.t1 AT3G10490 39.744 156 82 5 81 225 2 156 5.47e-26 107
MS.gene94836.t1 AT3G10490 39.744 156 82 5 81 225 2 156 5.47e-26 107
MS.gene94836.t1 AT1G02250 34.615 156 89 5 4 154 1 148 8.81e-26 106
MS.gene94836.t1 AT1G02220 35.714 154 88 4 4 155 1 145 1.18e-25 106
MS.gene94836.t1 AT1G01010 36.478 159 77 6 9 154 6 153 9.38e-23 99.0
MS.gene94836.t1 AT3G55210 35.366 164 87 6 5 155 10 167 1.24e-20 90.9
MS.gene94836.t1 AT2G43000 36.054 147 89 2 70 215 2 144 1.75e-20 88.6
MS.gene94836.t1 AT3G56530 31.169 154 100 3 4 155 50 199 4.57e-19 87.0
MS.gene94836.t1 AT2G18060 48.780 82 39 2 86 167 2 80 7.59e-19 85.5
MS.gene94836.t1 AT5G50820 31.818 176 101 6 4 173 15 177 1.95e-18 82.8
MS.gene94836.t1 AT3G04430 34.459 148 83 5 12 147 6 151 6.96e-17 78.6
MS.gene94836.t1 AT5G14000 30.201 149 94 3 4 150 13 153 7.38e-16 74.3
MS.gene94836.t1 AT5G14000 31.818 132 84 2 4 133 13 140 8.69e-15 72.8
MS.gene94836.t1 AT5G22290 50.000 68 27 2 87 154 2 62 3.12e-14 72.0

Find 74 sgRNAs with CRISPR-Local

Find 181 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGCATCACATGGAAATTT+TGG 0.149659 2.2:+26107607 None:intergenic
CTACCCCTCAAATTTATTTC+AGG 0.177248 2.2:-26107452 MS.gene94836:intron
GAGAAATCTGCCATCATTAA+AGG 0.255663 2.2:+26105814 None:intergenic
CTATTTGTTCTTGACCCATT+TGG 0.270391 2.2:+26109136 None:intergenic
GAGCAACAAGAGGTGGTTAT+TGG 0.284107 2.2:-26109114 MS.gene94836:CDS
ATTTCTTCCTAGCAAGGATA+TGG 0.291890 2.2:-26109194 MS.gene94836:CDS
TTTGGATACTTTCTATCTCT+TGG 0.302528 2.2:+26109154 None:intergenic
TGCTTCTCTCTCTTCTTTGA+AGG 0.328168 2.2:-26108942 MS.gene94836:intron
TGACTCTACCACCTGGATTC+AGG 0.329084 2.2:-26109462 MS.gene94836:CDS
AAGAGAAGTAATGCAAACTA+TGG 0.358125 2.2:-26107659 MS.gene94836:CDS
TAATGAAGAGGAACAAGTTA+AGG 0.412340 2.2:-26107755 MS.gene94836:CDS
AAGCAGTCATGAGATATATC+AGG 0.420403 2.2:+26105763 None:intergenic
AGAGATAGAAAGTATCCAAA+TGG 0.427350 2.2:-26109151 MS.gene94836:CDS
CCCTCAAACACCTTTAATGA+TGG 0.437428 2.2:-26105824 MS.gene94836:CDS
AATCCAGGTGGTAGAGTCAT+TGG 0.438768 2.2:+26109466 None:intergenic
GAAAATTCGACACAATGAAT+AGG 0.442423 2.2:+26107807 None:intergenic
GGTGGTTATTGGAAAGCAAC+TGG 0.443966 2.2:-26109103 MS.gene94836:CDS
CTCATGGGATTAGAACCAAT+TGG 0.456147 2.2:-26109003 MS.gene94836:CDS
TTCAGCTATTTCTTATCCAA+TGG 0.459398 2.2:-26107482 MS.gene94836:CDS
GTTACCTGAAATAAATTTGA+GGG 0.459661 2.2:+26107448 None:intergenic
TCTCTACAAATGTGAACCTT+GGG 0.462150 2.2:-26109347 MS.gene94836:CDS
ATATTCATGCATAACCCAAT+TGG 0.465898 2.2:+26108988 None:intergenic
AACTCTCAAAAGAGACAAGT+TGG 0.466190 2.2:-26109064 MS.gene94836:CDS
GATGGCAGATTTCTCACAAA+TGG 0.468718 2.2:-26105806 MS.gene94836:CDS
TCAGCTATTTCTTATCCAAT+GGG 0.470769 2.2:-26107481 MS.gene94836:CDS
ATATTATTACATGTCTCTGT+TGG 0.473572 2.2:+26107553 None:intergenic
GCCATCATTAAAGGTGTTTG+AGG 0.479676 2.2:+26105823 None:intergenic
TCATGGGATTAGAACCAATT+GGG 0.493990 2.2:-26109002 MS.gene94836:CDS
CCATCATTAAAGGTGTTTGA+GGG 0.496166 2.2:+26105824 None:intergenic
AAATACAGAGACTGTATGAA+TGG 0.500184 2.2:-26105730 MS.gene94836:CDS
ATCTCTACAAATGTGAACCT+TGG 0.501203 2.2:-26109348 MS.gene94836:CDS
GAGATAGAAAGTATCCAAAT+GGG 0.506144 2.2:-26109150 MS.gene94836:CDS
GATATAGAAATACCTATGTA+TGG 0.506641 2.2:-26105865 MS.gene94836:CDS
ATGTGATGCTTCTTCATCTG+AGG 0.512565 2.2:-26107596 MS.gene94836:CDS
GCAACAAGTTCTTCATCTGT+AGG 0.512741 2.2:+26109433 None:intergenic
TGTTACCTGAAATAAATTTG+AGG 0.513454 2.2:+26107447 None:intergenic
AACAGGAAGAACTATAGAGC+TGG 0.515756 2.2:-26109389 MS.gene94836:CDS
GAGGGGTAGCTTATTCCCAT+TGG 0.525888 2.2:+26107466 None:intergenic
CAACAAGTTCTTCATCTGTA+GGG 0.531691 2.2:+26109434 None:intergenic
GGATACAAAGAAGGAAATGA+TGG 0.533065 2.2:-26107734 MS.gene94836:CDS
CGTCTTATTGAATCACATCC+TGG 0.536625 2.2:-26108965 MS.gene94836:CDS
AAGATCATTTCTTCCTAGCA+AGG 0.548567 2.2:-26109200 MS.gene94836:CDS
ACAAGTTAAGGATACAAAGA+AGG 0.556054 2.2:-26107743 MS.gene94836:CDS
AAGACACTTGTTTATTACAA+AGG 0.562015 2.2:-26109034 MS.gene94836:CDS
GTAGGGTGGAACCTGAATCC+AGG 0.574340 2.2:+26109451 None:intergenic
TGTGAACCTTGGGATTTACC+AGG 0.580071 2.2:-26109337 MS.gene94836:intron
TCTTCATCTGAGGTCACTCA+AGG 0.581348 2.2:-26107586 MS.gene94836:CDS
TTCCTCTCAAGATCATTCTG+TGG 0.587376 2.2:-26105680 MS.gene94836:CDS
TACCACTCCATATCCTTGCT+AGG 0.589851 2.2:+26109187 None:intergenic
TACAAAGGTAGAGCACCTCA+TGG 0.591677 2.2:-26109019 MS.gene94836:CDS
AATGTACCTGGTAAATCCCA+AGG 0.593393 2.2:+26109331 None:intergenic
TTATAGAAGCCACCATACAT+AGG 0.598247 2.2:+26105853 None:intergenic
TAATAATCATTCTATGGCAT+AGG 0.598308 2.2:+26105652 None:intergenic
GTCTTAGAAGAACAAGTGCA+AGG 0.598803 2.2:-26107712 MS.gene94836:CDS
AGCCACAGAATGATCTTGAG+AGG 0.603596 2.2:+26105678 None:intergenic
TCTTAGAAGAACAAGTGCAA+GGG 0.610254 2.2:-26107711 MS.gene94836:CDS
ACAAATAGAGCAACAAGAGG+TGG 0.614366 2.2:-26109121 MS.gene94836:CDS
AAAGAAGAGAGAGAAGCACC+AGG 0.628486 2.2:+26108947 None:intergenic
ACAAAGGTAGAGCACCTCAT+GGG 0.636035 2.2:-26109018 MS.gene94836:CDS
TTACCTGAAATAAATTTGAG+GGG 0.638445 2.2:+26107449 None:intergenic
GCTCCAATGACTCTACCACC+TGG 0.641849 2.2:-26109469 MS.gene94836:CDS
TTCCTAGCAAGGATATGGAG+TGG 0.642089 2.2:-26109189 MS.gene94836:CDS
ATAGAAATACCTATGTATGG+TGG 0.647987 2.2:-26105862 MS.gene94836:CDS
CTTAGAAGAACAAGTGCAAG+GGG 0.650573 2.2:-26107710 MS.gene94836:CDS
CAAGTTCTTCATCTGTAGGG+TGG 0.653084 2.2:+26109437 None:intergenic
TGTGCATGAAAATCCTCTGT+GGG 0.661578 2.2:+26107529 None:intergenic
CAAGGGGAAGACTCAAGTGG+TGG 0.675596 2.2:-26107694 MS.gene94836:CDS
AGAACAAATAGAGCAACAAG+AGG 0.677656 2.2:-26109124 MS.gene94836:CDS
GTGCAAGGGGAAGACTCAAG+TGG 0.679628 2.2:-26107697 MS.gene94836:CDS
TCAGATGAAGAAGCATCACA+TGG 0.689871 2.2:+26107598 None:intergenic
TTGTGCATGAAAATCCTCTG+TGG 0.696517 2.2:+26107528 None:intergenic
CAATTGGTTCTAATCCCATG+AGG 0.731060 2.2:+26109004 None:intergenic
GGGTGGAACCTGAATCCAGG+TGG 0.737177 2.2:+26109454 None:intergenic
ATGTAATAATATACCCACAG+AGG 0.747259 2.2:-26107542 MS.gene94836:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTAAACAATATGATAT+TGG + chr2.2:26107187-26107206 None:intergenic 10.0%
!! ATTTGATTAAAATACATAAT+AGG + chr2.2:26108108-26108127 None:intergenic 10.0%
!! TATAAAGAAAAAGAAAATAA+AGG + chr2.2:26106993-26107012 None:intergenic 10.0%
!! TTTGATTAAAATACATAATA+GGG + chr2.2:26108107-26108126 None:intergenic 10.0%
!!! ATGTATTTTAATCAAATTTA+GGG - chr2.2:26108111-26108130 MS.gene94836:intron 10.0%
!!! TAATTTTACATGTAAATTTT+TGG - chr2.2:26108305-26108324 MS.gene94836:intron 10.0%
!!! TATGTATTTTAATCAAATTT+AGG - chr2.2:26108110-26108129 MS.gene94836:intron 10.0%
!!! TGAAAAAATTCAATTTTTTA+AGG + chr2.2:26106750-26106769 None:intergenic 10.0%
!! ATTGTTATGAAAAAAATTTC+AGG - chr2.2:26107302-26107321 MS.gene94836:intron 15.0%
!! CTTAAAAATCATATAAAGAA+TGG - chr2.2:26107768-26107787 MS.gene94836:CDS 15.0%
!! TACATAATTCAACATAAATT+TGG - chr2.2:26109035-26109054 MS.gene94836:CDS 15.0%
!!! AAATTGAATTTTTTCATAGA+TGG - chr2.2:26106754-26106773 MS.gene94836:intron 15.0%
!!! AAATTTTTGGATTTTATCAA+TGG - chr2.2:26108318-26108337 MS.gene94836:intron 15.0%
!!! ATGTTAGTTTTTTTTACTTA+AGG - chr2.2:26106624-26106643 MS.gene94836:intron 15.0%
!!! ATTTATTTTTGTATCCTTTT+AGG + chr2.2:26106783-26106802 None:intergenic 15.0%
!!! TTTATTTTTGTATCCTTTTA+GGG + chr2.2:26106782-26106801 None:intergenic 15.0%
!! AATATTGTATGTAACATTTG+AGG + chr2.2:26108150-26108169 None:intergenic 20.0%
!! CAAATAACTAAATAGAACTA+GGG - chr2.2:26106416-26106435 MS.gene94836:intron 20.0%
!! GTAATATTATGAAACATTTG+TGG - chr2.2:26106454-26106473 MS.gene94836:intron 20.0%
!! TAAAAATATTGAAATGCCAA+AGG - chr2.2:26108227-26108246 MS.gene94836:intron 20.0%
!! TACTACCATTCATATATATA+TGG + chr2.2:26105891-26105910 None:intergenic 20.0%
!! TACTTAGAAAGAAAAATAAC+AGG - chr2.2:26105729-26105748 MS.gene94836:CDS 20.0%
!! TCAAATAACTAAATAGAACT+AGG - chr2.2:26106415-26106434 MS.gene94836:intron 20.0%
!!! AACAGTTTATTTTGGTTTTT+AGG - chr2.2:26106493-26106512 MS.gene94836:intron 20.0%
!!! ACTATATCTTTTGCTAAAAT+TGG + chr2.2:26108668-26108687 None:intergenic 20.0%
!!! CATTTTTTTTTTAATGATGC+AGG - chr2.2:26109248-26109267 MS.gene94836:intron 20.0%
!!! GTTTTGATGAAAATAGAATT+TGG - chr2.2:26106673-26106692 MS.gene94836:intron 20.0%
!!! TAACAATACTTAGCTTTTAA+TGG + chr2.2:26107289-26107308 None:intergenic 20.0%
!!! TAATCTTCTCTTTTTTAAGA+AGG - chr2.2:26106356-26106375 MS.gene94836:intron 20.0%
!!! TTTTTAAGAAGGAATATGTT+AGG - chr2.2:26106367-26106386 MS.gene94836:intron 20.0%
! AAAAAATAGATGACTTCCTT+TGG + chr2.2:26108246-26108265 None:intergenic 25.0%
! AAACATTTGTGGCATAATAA+AGG - chr2.2:26106465-26106484 MS.gene94836:intron 25.0%
! AAACTCAAAAATATGCTATG+TGG + chr2.2:26108345-26108364 None:intergenic 25.0%
! AAAGTGATGTACTTGATTTA+AGG + chr2.2:26108795-26108814 None:intergenic 25.0%
! AACATTAACTCCTAATTAGA+AGG + chr2.2:26106609-26106628 None:intergenic 25.0%
! AACTCAAAAATATGCTATGT+GGG + chr2.2:26108344-26108363 None:intergenic 25.0%
! AAGACACTTGTTTATTACAA+AGG - chr2.2:26106101-26106120 MS.gene94836:intron 25.0%
! AAGTGATGTACTTGATTTAA+GGG + chr2.2:26108794-26108813 None:intergenic 25.0%
! ACATATGAAAAAGCAAAAGT+GGG - chr2.2:26107966-26107985 MS.gene94836:intron 25.0%
! ACATTAACTCCTAATTAGAA+GGG + chr2.2:26106608-26106627 None:intergenic 25.0%
! AGCAATATATGCATTTGATT+GGG - chr2.2:26108738-26108757 MS.gene94836:intron 25.0%
! AGTCACCATATATATATGAA+TGG - chr2.2:26105883-26105902 MS.gene94836:intron 25.0%
! AGTCAGTCAAAAGAAATTAT+AGG + chr2.2:26108485-26108504 None:intergenic 25.0%
! ATATTATTACATGTCTCTGT+TGG + chr2.2:26107585-26107604 None:intergenic 25.0%
! ATGAATCTATTAGATTGGTA+GGG - chr2.2:26107942-26107961 MS.gene94836:intron 25.0%
! ATTAAAATACATAATAGGGC+TGG + chr2.2:26108103-26108122 None:intergenic 25.0%
! ATTATTGTAAGAAATGTACC+TGG + chr2.2:26105819-26105838 None:intergenic 25.0%
! CATTATTATATTGATCTGCT+TGG - chr2.2:26108002-26108021 MS.gene94836:intron 25.0%
! GATATAGAAATACCTATGTA+TGG - chr2.2:26109270-26109289 MS.gene94836:intron 25.0%
! GTCAGTCAAAAGAAATTATA+GGG + chr2.2:26108484-26108503 None:intergenic 25.0%
! GTTACCTGAAATAAATTTGA+GGG + chr2.2:26107690-26107709 None:intergenic 25.0%
! TAATAGTAATACTACGTACA+CGG + chr2.2:26107096-26107115 None:intergenic 25.0%
! TCAAAAGAAATTATAGGGAA+TGG + chr2.2:26108479-26108498 None:intergenic 25.0%
! TCCAACAAAAAATAATGAAG+AGG - chr2.2:26107368-26107387 MS.gene94836:intron 25.0%
! TGTTACCTGAAATAAATTTG+AGG + chr2.2:26107691-26107710 None:intergenic 25.0%
! TTACCTGAAATAAATTTGAG+GGG + chr2.2:26107689-26107708 None:intergenic 25.0%
!! GACTAGTGATATACAAATTT+TGG + chr2.2:26106843-26106862 None:intergenic 25.0%
!! GTAATTTTCGTCGATAAATT+TGG - chr2.2:26109120-26109139 MS.gene94836:CDS 25.0%
!! TGAACTATTTTCTTCTTCAT+AGG + chr2.2:26107637-26107656 None:intergenic 25.0%
!! TGAGCTTTATAAAAAGATTG+AGG + chr2.2:26108412-26108431 None:intergenic 25.0%
!!! AGGAAGTCATCTATTTTTTA+TGG - chr2.2:26108247-26108266 MS.gene94836:intron 25.0%
!!! TAATGGTACATTTTTTTGTG+TGG + chr2.2:26107272-26107291 None:intergenic 25.0%
!!! TCCTCTTCATTATTTTTTGT+TGG + chr2.2:26107372-26107391 None:intergenic 25.0%
!!! TGCAACTATTGTGTTTTAAA+TGG - chr2.2:26106232-26106251 MS.gene94836:intron 25.0%
AAAGATGTATCTTAGTGGTT+TGG + chr2.2:26108601-26108620 None:intergenic 30.0%
AAATACAGAGACTGTATGAA+TGG - chr2.2:26109405-26109424 MS.gene94836:CDS 30.0%
AAGAGAAGTAATGCAAACTA+TGG - chr2.2:26107476-26107495 MS.gene94836:CDS 30.0%
AAGCAAATGTATAGCAAGAT+TGG + chr2.2:26107133-26107152 None:intergenic 30.0%
AAGCTAAAGATGTATCTTAG+TGG + chr2.2:26108606-26108625 None:intergenic 30.0%
ACAAGTTAAGGATACAAAGA+AGG - chr2.2:26107392-26107411 MS.gene94836:intron 30.0%
AGCAAGATTGGAAAAAGAAA+AGG + chr2.2:26107121-26107140 None:intergenic 30.0%
ATAGAAATACCTATGTATGG+TGG - chr2.2:26109273-26109292 MS.gene94836:intron 30.0%
ATATTCATGCATAACCCAAT+TGG + chr2.2:26106150-26106169 None:intergenic 30.0%
ATGTAATAATATACCCACAG+AGG - chr2.2:26107593-26107612 MS.gene94836:CDS 30.0%
ATTGGAACTAAAGTTACTCT+TGG + chr2.2:26108893-26108912 None:intergenic 30.0%
ATTTCTATTGTAGAGGCTTT+AGG + chr2.2:26108837-26108856 None:intergenic 30.0%
ATTTGTGGCATAATAAAGGA+GGG - chr2.2:26106469-26106488 MS.gene94836:intron 30.0%
CATATGAAAAAGCAAAAGTG+GGG - chr2.2:26107967-26107986 MS.gene94836:intron 30.0%
CATGAATCTATTAGATTGGT+AGG - chr2.2:26107941-26107960 MS.gene94836:intron 30.0%
CATTAACTCCTAATTAGAAG+GGG + chr2.2:26106607-26106626 None:intergenic 30.0%
GAAAATTCGACACAATGAAT+AGG + chr2.2:26107331-26107350 None:intergenic 30.0%
GACATATGAAAAAGCAAAAG+TGG - chr2.2:26107965-26107984 MS.gene94836:intron 30.0%
GAGCAATATATGCATTTGAT+TGG - chr2.2:26108737-26108756 MS.gene94836:intron 30.0%
GAGTAAAGAGATCTTTACTT+TGG + chr2.2:26108526-26108545 None:intergenic 30.0%
GATCTTAAAGTGATGAAAGT+TGG - chr2.2:26108372-26108391 MS.gene94836:intron 30.0%
GCAAGATTGGAAAAAGAAAA+GGG + chr2.2:26107120-26107139 None:intergenic 30.0%
GCAATATATGCATTTGATTG+GGG - chr2.2:26108739-26108758 MS.gene94836:intron 30.0%
GTGTCATGAATCTATTAGAT+TGG - chr2.2:26107937-26107956 MS.gene94836:intron 30.0%
TAATGAAGAGGAACAAGTTA+AGG - chr2.2:26107380-26107399 MS.gene94836:intron 30.0%
TGAATCTATTAGATTGGTAG+GGG - chr2.2:26107943-26107962 MS.gene94836:intron 30.0%
TTAAAGCAAGCACTAAACAA+CGG + chr2.2:26106819-26106838 None:intergenic 30.0%
TTGGAACTAAAGTTACTCTT+GGG + chr2.2:26108892-26108911 None:intergenic 30.0%
TTTGGATACTTTCTATCTCT+TGG + chr2.2:26105984-26106003 None:intergenic 30.0%
! AACTTTAGTTCCAATTAGCT+AGG - chr2.2:26108898-26108917 MS.gene94836:intron 30.0%
! TGTATATCACTAGTCTATAC+AGG - chr2.2:26106848-26106867 MS.gene94836:intron 30.0%
!! AAGAATGGATTGTGATTGTT+TGG - chr2.2:26107783-26107802 MS.gene94836:CDS 30.0%
!! AGAGATAGAAAGTATCCAAA+TGG - chr2.2:26105984-26106003 MS.gene94836:intron 30.0%
!! GAGATAGAAAGTATCCAAAT+GGG - chr2.2:26105985-26106004 MS.gene94836:intron 30.0%
!! TAGGGTTATTTCTATTGTAG+AGG + chr2.2:26108844-26108863 None:intergenic 30.0%
!! TCAGCTATTTCTTATCCAAT+GGG - chr2.2:26107654-26107673 MS.gene94836:CDS 30.0%
!! TTCAGCTATTTCTTATCCAA+TGG - chr2.2:26107653-26107672 MS.gene94836:CDS 30.0%
!!! ACTAGGGTTTTGAAGAAAAT+AGG - chr2.2:26106432-26106451 MS.gene94836:intron 30.0%
AACTCTCAAAAGAGACAAGT+TGG - chr2.2:26106071-26106090 MS.gene94836:intron 35.0%
AAGATCATTTCTTCCTAGCA+AGG - chr2.2:26105935-26105954 MS.gene94836:intron 35.0%
AAGCAGTCATGAGATATATC+AGG + chr2.2:26109375-26109394 None:intergenic 35.0%
AGAACAAATAGAGCAACAAG+AGG - chr2.2:26106011-26106030 MS.gene94836:intron 35.0%
ATAACTCATGCCTAGCTAAT+TGG + chr2.2:26108911-26108930 None:intergenic 35.0%
ATCTCTACAAATGTGAACCT+TGG - chr2.2:26105787-26105806 MS.gene94836:CDS 35.0%
ATGGTGAAGAAAAGCCAAAT+TGG + chr2.2:26108460-26108479 None:intergenic 35.0%
ATTTCTTCCTAGCAAGGATA+TGG - chr2.2:26105941-26105960 MS.gene94836:intron 35.0%
CAACAAGTTCTTCATCTGTA+GGG + chr2.2:26105704-26105723 None:intergenic 35.0%
CATTTGTGGCATAATAAAGG+AGG - chr2.2:26106468-26106487 MS.gene94836:intron 35.0%
CTACCCCTCAAATTTATTTC+AGG - chr2.2:26107683-26107702 MS.gene94836:CDS 35.0%
CTATTTGTTCTTGACCCATT+TGG + chr2.2:26106002-26106021 None:intergenic 35.0%
GAACATATAGTGACTAGTGT+AGG + chr2.2:26106971-26106990 None:intergenic 35.0%
GAGAAATCTGCCATCATTAA+AGG + chr2.2:26109324-26109343 None:intergenic 35.0%
GAGCATAAATGCTACAAACA+TGG + chr2.2:26108050-26108069 None:intergenic 35.0%
GGATACAAAGAAGGAAATGA+TGG - chr2.2:26107401-26107420 MS.gene94836:intron 35.0%
GTATACAAACAGTAGAGGAA+TGG - chr2.2:26106521-26106540 MS.gene94836:intron 35.0%
TCATGGGATTAGAACCAATT+GGG - chr2.2:26106133-26106152 MS.gene94836:intron 35.0%
TCTCTACAAATGTGAACCTT+GGG - chr2.2:26105788-26105807 MS.gene94836:CDS 35.0%
TCTTAGAAGAACAAGTGCAA+GGG - chr2.2:26107424-26107443 MS.gene94836:intron 35.0%
TGCTACAAACATGGAGAAAA+AGG + chr2.2:26108041-26108060 None:intergenic 35.0%
TTATAGAAGCCACCATACAT+AGG + chr2.2:26109285-26109304 None:intergenic 35.0%
TTCATAGATGGAACCCTAAA+AGG - chr2.2:26106766-26106785 MS.gene94836:intron 35.0%
TTGCTGTATACAAACAGTAG+AGG - chr2.2:26106516-26106535 MS.gene94836:intron 35.0%
! AGGAGGGAAACAGTTTATTT+TGG - chr2.2:26106485-26106504 MS.gene94836:intron 35.0%
!! CCATCATTAAAGGTGTTTGA+GGG + chr2.2:26109314-26109333 None:intergenic 35.0%
!! GAAGCATCACATGGAAATTT+TGG + chr2.2:26107531-26107550 None:intergenic 35.0%
!! GCTCACTTCTAAAATTCACT+TGG - chr2.2:26108427-26108446 MS.gene94836:intron 35.0%
!! GTTTTGAACCTTGTTCTACA+AGG - chr2.2:26106936-26106955 MS.gene94836:intron 35.0%
!! TTTACTCCCATTTTTCCTCA+CGG - chr2.2:26108539-26108558 MS.gene94836:intron 35.0%
AACAGGAAGAACTATAGAGC+TGG - chr2.2:26105746-26105765 MS.gene94836:CDS 40.0%
AACGAACCGTGAGGAAAAAT+GGG + chr2.2:26108548-26108567 None:intergenic 40.0%
AATGTACCTGGTAAATCCCA+AGG + chr2.2:26105807-26105826 None:intergenic 40.0%
ACAAATAGAGCAACAAGAGG+TGG - chr2.2:26106014-26106033 MS.gene94836:intron 40.0%
ATGTGATGCTTCTTCATCTG+AGG - chr2.2:26107539-26107558 MS.gene94836:CDS 40.0%
ATGTGCATCCTTGTAGAACA+AGG + chr2.2:26106947-26106966 None:intergenic 40.0%
CAAGTGGCAAAAGAAGAGTA+GGG + chr2.2:26108862-26108881 None:intergenic 40.0%
CCCTCAAACACCTTTAATGA+TGG - chr2.2:26109311-26109330 MS.gene94836:intron 40.0%
CTCATGGGATTAGAACCAAT+TGG - chr2.2:26106132-26106151 MS.gene94836:intron 40.0%
CTTAGAAGAACAAGTGCAAG+GGG - chr2.2:26107425-26107444 MS.gene94836:intron 40.0%
GATGGCAGATTTCTCACAAA+TGG - chr2.2:26109329-26109348 MS.gene94836:intron 40.0%
GCAACAAGTTCTTCATCTGT+AGG + chr2.2:26105705-26105724 None:intergenic 40.0%
GTCTTAGAAGAACAAGTGCA+AGG - chr2.2:26107423-26107442 MS.gene94836:intron 40.0%
TAACGAACCGTGAGGAAAAA+TGG + chr2.2:26108549-26108568 None:intergenic 40.0%
TGCTTCTCTCTCTTCTTTGA+AGG - chr2.2:26106193-26106212 MS.gene94836:intron 40.0%
TGTGCATGAAAATCCTCTGT+GGG + chr2.2:26107609-26107628 None:intergenic 40.0%
TGTGTTGTCCCCTTCTAATT+AGG - chr2.2:26106596-26106615 MS.gene94836:intron 40.0%
TTCCTCTCAAGATCATTCTG+TGG - chr2.2:26109455-26109474 MS.gene94836:CDS 40.0%
TTGTGCATGAAAATCCTCTG+TGG + chr2.2:26107610-26107629 None:intergenic 40.0%
! ATTTTTCCTCACGGTTCGTT+AGG - chr2.2:26108548-26108567 MS.gene94836:intron 40.0%
! CGTCTTATTGAATCACATCC+TGG - chr2.2:26106170-26106189 MS.gene94836:intron 40.0%
!! CAATTGGTTCTAATCCCATG+AGG + chr2.2:26106134-26106153 None:intergenic 40.0%
!! GCCATCATTAAAGGTGTTTG+AGG + chr2.2:26109315-26109334 None:intergenic 40.0%
!! TCAGATGAAGAAGCATCACA+TGG + chr2.2:26107540-26107559 None:intergenic 40.0%
AATCCAGGTGGTAGAGTCAT+TGG + chr2.2:26105672-26105691 None:intergenic 45.0%
ACTCTTGGGAATAGTGCAAG+TGG + chr2.2:26108878-26108897 None:intergenic 45.0%
AGCCACAGAATGATCTTGAG+AGG + chr2.2:26109460-26109479 None:intergenic 45.0%
CAAGTTCTTCATCTGTAGGG+TGG + chr2.2:26105701-26105720 None:intergenic 45.0%
GAGCAACAAGAGGTGGTTAT+TGG - chr2.2:26106021-26106040 MS.gene94836:intron 45.0%
GCAAGTGGCAAAAGAAGAGT+AGG + chr2.2:26108863-26108882 None:intergenic 45.0%
GGTGGTTATTGGAAAGCAAC+TGG - chr2.2:26106032-26106051 MS.gene94836:intron 45.0%
TACCACTCCATATCCTTGCT+AGG + chr2.2:26105951-26105970 None:intergenic 45.0%
TGGAAATGCAGAGTAGGCAA+AGG + chr2.2:26108083-26108102 None:intergenic 45.0%
TGTGAACCTTGGGATTTACC+AGG - chr2.2:26105798-26105817 MS.gene94836:CDS 45.0%
TTCCTAGCAAGGATATGGAG+TGG - chr2.2:26105946-26105965 MS.gene94836:intron 45.0%
TTGAAACCTAACGAACCGTG+AGG + chr2.2:26108557-26108576 None:intergenic 45.0%
! ACAAAGGTAGAGCACCTCAT+GGG - chr2.2:26106117-26106136 MS.gene94836:intron 45.0%
! CACTTGGACTGACTCCAATT+TGG - chr2.2:26108443-26108462 MS.gene94836:intron 45.0%
! TACAAAGGTAGAGCACCTCA+TGG - chr2.2:26106116-26106135 MS.gene94836:intron 45.0%
! TCTTCATCTGAGGTCACTCA+AGG - chr2.2:26107549-26107568 MS.gene94836:CDS 45.0%
!! AAAGAAGAGAGAGAAGCACC+AGG + chr2.2:26106191-26106210 None:intergenic 45.0%
GAGGGGTAGCTTATTCCCAT+TGG + chr2.2:26107672-26107691 None:intergenic 50.0%
TAGGGCTGGAAATGCAGAGT+AGG + chr2.2:26108089-26108108 None:intergenic 50.0%
TGACTCTACCACCTGGATTC+AGG - chr2.2:26105673-26105692 MS.gene94836:CDS 50.0%
CAAGGGGAAGACTCAAGTGG+TGG - chr2.2:26107441-26107460 MS.gene94836:intron 55.0%
GCTCCAATGACTCTACCACC+TGG - chr2.2:26105666-26105685 MS.gene94836:CDS 55.0%
GTAGGGTGGAACCTGAATCC+AGG + chr2.2:26105687-26105706 None:intergenic 55.0%
GTGCAAGGGGAAGACTCAAG+TGG - chr2.2:26107438-26107457 MS.gene94836:intron 55.0%
GGGTGGAACCTGAATCCAGG+TGG + chr2.2:26105684-26105703 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 26105663 26109494 26105663 ID=MS.gene94836
chr2.2 mRNA 26105663 26109494 26105663 ID=MS.gene94836.t1;Parent=MS.gene94836
chr2.2 exon 26109338 26109494 26109338 ID=MS.gene94836.t1.exon1;Parent=MS.gene94836.t1
chr2.2 CDS 26109338 26109494 26109338 ID=cds.MS.gene94836.t1;Parent=MS.gene94836.t1
chr2.2 exon 26108943 26109223 26108943 ID=MS.gene94836.t1.exon2;Parent=MS.gene94836.t1
chr2.2 CDS 26108943 26109223 26108943 ID=cds.MS.gene94836.t1;Parent=MS.gene94836.t1
chr2.2 exon 26107453 26107833 26107453 ID=MS.gene94836.t1.exon3;Parent=MS.gene94836.t1
chr2.2 CDS 26107453 26107833 26107453 ID=cds.MS.gene94836.t1;Parent=MS.gene94836.t1
chr2.2 exon 26105663 26105887 26105663 ID=MS.gene94836.t1.exon4;Parent=MS.gene94836.t1
chr2.2 CDS 26105663 26105887 26105663 ID=cds.MS.gene94836.t1;Parent=MS.gene94836.t1
Gene Sequence

>MS.gene94836

ATGGCTCCAATGACTCTACCACCTGGATTCAGGTTCCACCCTACAGATGAAGAACTTGTTGCTTACTACTTAGAAAGAAAAATAACAGGAAGAACTATAGAGCTGGATATCATTGCAGAAGTTGATCTCTACAAATGTGAACCTTGGGATTTACCAGGTACATTTCTTACAATAATTTATAATCATCTCATGCATTCATATTTTTAATTTTATATAATTCAGTCACCATATATATATGAATGGTAGTAATTTTATTTGAATTTATTTGCAGAAAGATCATTTCTTCCTAGCAAGGATATGGAGTGGTATTTTTATAGTCCAAGAGATAGAAAGTATCCAAATGGGTCAAGAACAAATAGAGCAACAAGAGGTGGTTATTGGAAAGCAACTGGAAAAGATAGAGCAGTGAACTCTCAAAAGAGACAAGTTGGAATGAAGAAGACACTTGTTTATTACAAAGGTAGAGCACCTCATGGGATTAGAACCAATTGGGTTATGCATGAATATCGTCTTATTGAATCACATCCTGGTGCTTCTCTCTCTTCTTTGAAGGTACATATTAAGATTTATGCAACTATTGTGTTTTAAATGGCAAATATTAGTAATTAGTTGTTAGTAATATTCGCGAAAGAGTTTAAAATTTGAAATTCGCATGAACTTATTTTTCTCATTAATATTATCTTGTTCATCTATTAATCTTCTCTTTTTTAAGAAGGAATATGTTAGGCTTTATTTTGTATAAATATCATTTATCAAATAACTAAATAGAACTAGGGTTTTGAAGAAAATAGGTAATATTATGAAACATTTGTGGCATAATAAAGGAGGGAAACAGTTTATTTTGGTTTTTAGGTTGCTGTATACAAACAGTAGAGGAATGGTTCTTTTTTCTTTCTTTATCTATCTTTAAAATTTTTATGTATAACAATTGAATGTGTTGTCCCCTTCTAATTAGGAGTTAATGTTAGTTTTTTTTACTTAAGGAGTTTTGTTAGTTTTGAGAATGTCTCGTTTTGATGAAAATAGAATTTGGTATTTGAGTTTAAGTATCTATTCTCTTAATTTTATACATCATTTTTTGCTGCCTTAAAAAATTGAATTTTTTCATAGATGGAACCCTAAAAGGATACAAAAATAAATTCATGAGACAAAACCGTTGTTTAGTGCTTGCTTTAATCCAAAATTTGTATATCACTAGTCTATACAGGATTCTTTTGAGATTGATCAGCTTATGTTGTTATCATTATCTCACATAATCAAACTCATCTCTACTGTTTTGAACCTTGTTCTACAAGGATGCACATGCCTACACTAGTCACTATATGTTCCTTTATTTTCTTTTTCTTTATATGATTTGCAAACTTTAATTTTCTTTTCTCATCTTTAGAAAAATAGCTTATGATCAAAATGTTGTGATGAAAAATTCAGATCCGTGTACGTAGTATTACTATTAACCCTTTTCTTTTTCCAATCTTGCTATACATTTGCTTTATATTTTCTTACTTTTTTCTTGCATTGCATCCAATATCATATTGTTTAATTTTAATACACTCTCAATGTAAAAAGTGTTAAGATGTCAACAAATTACAATCATTAATGTTTTTGACCACACAAAAAAATGTACCATTAAAAGCTAAGTATTGTTATGAAAAAAATTTCAGGATTCCTATTCATTGTGTCGAATTTTCAAGAAGACAATTCAAATTCCAACAAAAAATAATGAAGAGGAACAAGTTAAGGATACAAAGAAGGAAATGATGGTCTTAGAAGAACAAGTGCAAGGGGAAGACTCAAGTGGTGGCACAGAGATTTCAAGAGAAGTAATGCAAACTATGGATGAAAAAATTCTTAATCAAGATGAACATCCAAAATTTCCATGTGATGCTTCTTCATCTGAGGTCACTCAAGGAACATGTACACCAACAGAGACATGTAATAATATACCCACAGAGGATTTTCATGCACAATTTGCCTATGAAGAAGAAAATAGTTCAGCTATTTCTTATCCAATGGGAATAAGCTACCCCTCAAATTTATTTCAGGTAACATTTTTTATACTGTTACTGAATTAGTTTATTAACATTATTTAACTTGAATCAAAACATCTTAAAAATCATATAAAGAATGGATTGTGATTGTTTGGTAGCATAAAAATTACATTAGATGTATACAAATTAAATTATTTAAATACTTCAATTATTTTATAAAAAAATACTTCAATTTCATAAACTTCATGATTGTTTGATTTTGTATTGTAGTAATATTAACGTAGATGTGTCATGAATCTATTAGATTGGTAGGGGACATATGAAAAAGCAAAAGTGGGGTCATAGAATGATCATTATTATATTGATCTGCTTGGTATATTAACTTTTCCTTTTTCTCCATGTTTGTAGCATTTATGCTCATGATGACTTCCTTTGCCTACTCTGCATTTCCAGCCCTATTATGTATTTTAATCAAATTTAGGGCTTCATTATCACACCTCAAATGTTACATACAATATTAGAATTTAAATCACTTCTAGTTCTTACTTCACACATTTGCATCAACTTGAACATTTATAAAAATATTGAAATGCCAAAGGAAGTCATCTATTTTTTATGGCAAAATTTAACATATTTTAATAGTATATGTCTTAGTAATTTTACATGTAAATTTTTGGATTTTATCAATGGCCCACATAGCATATTTTTGAGTTTCTCTTTTGATCTTAAAGTGATGAAAGTTGGAAGTATGATGAAGTCCTCAATCTTTTTATAAAGCTCACTTCTAAAATTCACTTGGACTGACTCCAATTTGGCTTTTCTTCACCATTCCCTATAATTTCTTTTGACTGACTATATACTCAAAACGTTTTCCAAAGTAAAGATCTCTTTACTCCCATTTTTCCTCACGGTTCGTTAGGTTTCAAAGACTAAAGCATATACACATACCAAACCACTAAGATACATCTTTAGCTTTAATCACATTCTTTTTTATCAATAATGTTTTGATCATTTCCAATTTTAGCAAAAGATATAGTGATGTTACAACTATTTCAACTATCTTTACAATATTTATTGAATTCATGCGAGCAATATATGCATTTGATTGGGGACTTCAATAAGTTCAAATTTTCTCTTACACCCTTAAATCAAGTACATCACTTTTTAATCTTTTCAATTTAAACCTAAAGCCTCTACAATAGAAATAACCCTACTCTTCTTTTGCCACTTGCACTATTCCCAAGAGTAACTTTAGTTCCAATTAGCTAGGCATGAGTTATACATGCATATGTCTTCATAGTTCATATATTTCAATAAGAACATTATTATTTTGAAGAAAATCAATAAGAACATTATAATTTATTTTTAAAGAGCTAGCAAAAAATACATAATTCAACATAAATTTGGTGACGAGATAATTAGTATTTATATAATTAAAATATTAAAGAAAAGCTTGCATTTAGTCTTATGTAATTTTCGTCGATAAATTTGGTGACGAGATAATTAAACATAAATTTAATTTTTATGCACTAATATTTTGACATTGATTTTATTTTTTCTAGTAATATACATCATTGATATTTAATAATTAATATAGCATTTTTTTTTTAATGATGCAGGATATAGAAATACCTATGTATGGTGGCTTCTATAATCAATTCCCTCAAACACCTTTAATGATGGCAGATTTCTCACAAATGGAGACAAAATCAATAATGAAGCCTGATATATCTCATGACTGCTTTTTGTATGACAAATACAGAGACTGTATGAATGGAACACTTGAAGAAATTATCTCTTTATGTTCCTCTCAAGATCATTCTGTGGCTTTTCCTATGCCATAG
Protein sequence

>MS.gene94836.t1

MAPMTLPPGFRFHPTDEELVAYYLERKITGRTIELDIIAEVDLYKCEPWDLPERSFLPSKDMEWYFYSPRDRKYPNGSRTNRATRGGYWKATGKDRAVNSQKRQVGMKKTLVYYKGRAPHGIRTNWVMHEYRLIESHPGASLSSLKDSYSLCRIFKKTIQIPTKNNEEEQVKDTKKEMMVLEEQVQGEDSSGGTEISREVMQTMDEKILNQDEHPKFPCDASSSEVTQGTCTPTETCNNIPTEDFHAQFAYEEENSSAISYPMGISYPSNLFQDIEIPMYGGFYNQFPQTPLMMADFSQMETKSIMKPDISHDCFLYDKYRDCMNGTLEEIISLCSSQDHSVAFPMP