AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene94867

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94867.t1 MTR_6g053200 79.899 199 27 2 110 308 351 536 1.50e-105 318
MS.gene94867.t1 MTR_6g053200 81.651 109 20 0 1 109 155 263 2.76e-26 108
MS.gene94867.t1 MTR_2g024380 49.246 199 101 0 110 308 272 470 8.12e-59 196
MS.gene94867.t1 MTR_2g024350 47.236 199 105 0 110 308 29 227 1.83e-58 187
MS.gene94867.t1 MTR_7g104980 50.246 203 100 1 106 308 14 215 4.46e-54 176
MS.gene94867.t1 MTR_8g067650 36.735 196 84 4 110 304 360 516 7.47e-28 113
MS.gene94867.t1 MTR_8g067635 38.919 185 79 4 110 293 370 521 6.78e-26 107
MS.gene94867.t1 MTR_8g069935 60.417 48 19 0 110 157 352 399 9.96e-12 65.5
MS.gene94867.t1 MTR_1g099600 48.148 54 27 1 111 164 207 259 3.69e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 67 sgRNAs with CRISPR-Local

Find 131 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCAGAAAACAAACTTAT+TGG 0.119694 6.1:+29573053 MS.gene94867:CDS
TTTCTCTAGCAGCAGGTAAA+TGG 0.191301 6.1:-29572917 None:intergenic
ATAAGTTCAGTTTCTGAATA+AGG 0.191932 6.1:-29572888 None:intergenic
TAGTCTTTGATGACTTGTTC+TGG 0.291346 6.1:-29572734 None:intergenic
TATGTCAGAGGATTTCTTAT+TGG 0.311118 6.1:+29573121 MS.gene94867:CDS
TAAGTTCAGTTTCTGAATAA+GGG 0.317166 6.1:-29572887 None:intergenic
GGTACGAGGATTGAAATTAT+TGG 0.325131 6.1:-29571312 None:intergenic
TTGGTAGGCGTGGGGTTAAC+AGG 0.331361 6.1:-29571293 None:intergenic
AACATCATCACTAGTGTTCA+TGG 0.367859 6.1:+29571467 MS.gene94867:CDS
AGTCTTTGATGACTTGTTCT+GGG 0.370924 6.1:-29572733 None:intergenic
TCATGGGAGTCAGTCTAGTT+GGG 0.386838 6.1:-29571352 None:intergenic
GTCATGGGAGTCAGTCTAGT+TGG 0.405382 6.1:-29571353 None:intergenic
GTCAAGTTGGTGGTGGAGCT+AGG 0.407770 6.1:-29571443 None:intergenic
GAACCCAGCTTTGAAATGTT+TGG 0.416902 6.1:-29572789 None:intergenic
GTGATTCACCGGAGTAATCA+TGG 0.421109 6.1:-29573022 None:intergenic
CAACAAGAAATGCAATCAAA+TGG 0.425635 6.1:+29571236 None:intergenic
CACAACAAAAGTGTCCTCTT+TGG 0.441667 6.1:-29572646 None:intergenic
AACACTTGACTGTTATTGTT+TGG 0.445737 6.1:-29571551 None:intergenic
GTCACCAAACATTTCAAAGC+TGG 0.449524 6.1:+29572785 MS.gene94867:CDS
TTCTCTAGCAGCAGGTAAAT+GGG 0.451842 6.1:-29572916 None:intergenic
ACTTGAATATTCCTGCTCTC+TGG 0.454557 6.1:-29572843 None:intergenic
GCAGGTAAATGGAACTCTAT+TGG 0.471063 6.1:+29572702 MS.gene94867:CDS
ATAGAGTTCCATTTACCTGC+TGG 0.487185 6.1:-29572699 None:intergenic
TCATGGGCATTGCTACTCAT+TGG 0.492500 6.1:-29573005 None:intergenic
GATTCAATTTCTCTAGCAGC+AGG 0.497334 6.1:-29572924 None:intergenic
GAAGGTGTTGGTAGTGGTCA+TGG 0.499188 6.1:-29571369 None:intergenic
AACAAGAAATGCAATCAAAT+GGG 0.503558 6.1:+29571237 None:intergenic
GTGGTGGAGCTAGGGCTAAT+AGG 0.510314 6.1:-29571434 None:intergenic
TTGAAATTATTGGTAGGCGT+GGG 0.511388 6.1:-29571302 None:intergenic
TCACCAAACATTTCAAAGCT+GGG 0.518423 6.1:+29572786 MS.gene94867:CDS
GTCAGTCTAGTTGGGGTGCA+AGG 0.520565 6.1:-29571344 None:intergenic
GTTAGCGAAGGTGTTGGTAG+TGG 0.522503 6.1:-29571375 None:intergenic
AAGACTAGATTACCCGCTGT+TGG 0.528458 6.1:+29572750 MS.gene94867:CDS
TAAGGGATTTCTGATTGACT+AGG 0.529361 6.1:-29572870 None:intergenic
AGTGATGATGTTAGTCAAGT+TGG 0.536549 6.1:-29571456 None:intergenic
GAGTATTGCATAATCTGAAA+TGG 0.538274 6.1:-29571507 None:intergenic
TCAAGTTGGTGGTGGAGCTA+GGG 0.539100 6.1:-29571442 None:intergenic
AGGAAGGATTTGTGATTCAC+CGG 0.548075 6.1:-29573033 None:intergenic
AAGGGATTTCTGATTGACTA+GGG 0.549712 6.1:-29572869 None:intergenic
GACTTGAAATTTCCAACAGC+GGG 0.560025 6.1:-29572762 None:intergenic
TCTGACATATCAGTCATGCT+TGG 0.560481 6.1:-29573107 None:intergenic
TGATTCACCGGAGTAATCAT+GGG 0.561593 6.1:-29573021 None:intergenic
ATTGAAATTATTGGTAGGCG+TGG 0.569218 6.1:-29571303 None:intergenic
CATGGGAGTCAGTCTAGTTG+GGG 0.570910 6.1:-29571351 None:intergenic
ATGTCGATCATCCAGAGAGC+AGG 0.571282 6.1:+29572832 MS.gene94867:CDS
AGTTGTTGTGGGGTTAGCGA+AGG 0.571858 6.1:-29571387 None:intergenic
AAGGTGTTGGTAGTGGTCAT+GGG 0.574401 6.1:-29571368 None:intergenic
CGAGGATTGAAATTATTGGT+AGG 0.574794 6.1:-29571308 None:intergenic
GATGATGTTAGTCAAGTTGG+TGG 0.578135 6.1:-29571453 None:intergenic
TGAAATGGTAGGATATTGAC+TGG 0.578765 6.1:-29571492 None:intergenic
GGTAAATGGAACTCTATTGG+TGG 0.596193 6.1:+29572705 MS.gene94867:CDS
ATTGCATAATCTGAAATGGT+AGG 0.596503 6.1:-29571503 None:intergenic
GATGTTAGTCAAGTTGGTGG+TGG 0.602752 6.1:-29571450 None:intergenic
TGTGGGGTTAGCGAAGGTGT+TGG 0.606403 6.1:-29571381 None:intergenic
CTAATAGGTCCAGTAGTGGT+CGG 0.607958 6.1:-29571419 None:intergenic
CTTTGATGACTTGTTCTGGG+AGG 0.611922 6.1:-29572730 None:intergenic
TTGGGGTGCAAGGAGTAGTG+AGG 0.617997 6.1:-29571334 None:intergenic
GTAAATGGAACTCTATTGGT+GGG 0.619020 6.1:+29572706 MS.gene94867:CDS
GAAATAGAAAACCATCATTG+AGG 0.620026 6.1:-29573154 None:intergenic
TGAAATTATTGGTAGGCGTG+GGG 0.623408 6.1:-29571301 None:intergenic
CAAGGAGTAGTGAGGGTACG+AGG 0.625029 6.1:-29571326 None:intergenic
AGCAATGCCCATGATTACTC+CGG 0.626209 6.1:+29573014 MS.gene94867:CDS
TGGGGTGCAAGGAGTAGTGA+GGG 0.635620 6.1:-29571333 None:intergenic
ATAGAAAACCATCATTGAGG+TGG 0.645904 6.1:-29573151 None:intergenic
AAGCATGACTGATATGTCAG+AGG 0.660878 6.1:+29573109 MS.gene94867:CDS
CGACTTGAAATTTCCAACAG+CGG 0.670165 6.1:-29572763 None:intergenic
AGGGCTAATAGGTCCAGTAG+TGG 0.675550 6.1:-29571423 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATCAAAATTAATGTATTTT+TGG + chr6.1:29572221-29572240 MS.gene94867:intron 10.0%
!! AACAAGAAGAAAAAATAAAA+AGG - chr6.1:29572329-29572348 None:intergenic 15.0%
!! ACTAAAAATATATGTGTATT+TGG - chr6.1:29572486-29572505 None:intergenic 15.0%
!! TTACAGAAAAATTAACAACA+AGG + chr6.1:29571813-29571832 MS.gene94867:intron 20.0%
!!! TAACAATCAAAACTTTTACA+TGG - chr6.1:29572282-29572301 None:intergenic 20.0%
!!! TTTTTGGTTTAAGTACAAAA+TGG + chr6.1:29572237-29572256 MS.gene94867:intron 20.0%
! AATGAGTGATATATTTGTTC+AGG - chr6.1:29572422-29572441 None:intergenic 25.0%
! AATTAACAACAAGGTAACTT+TGG + chr6.1:29571822-29571841 MS.gene94867:intron 25.0%
! ACAAATATATCACTCATTTC+AGG + chr6.1:29572424-29572443 MS.gene94867:intron 25.0%
! ATAAGTTCAGTTTCTGAATA+AGG - chr6.1:29572891-29572910 None:intergenic 25.0%
! ATTAAAGTGATACGATTTAG+AGG + chr6.1:29572520-29572539 MS.gene94867:intron 25.0%
! CAAAACATAATTCAAGAATC+GGG + chr6.1:29571693-29571712 MS.gene94867:intron 25.0%
! CAAATATATCACTCATTTCA+GGG + chr6.1:29572425-29572444 MS.gene94867:intron 25.0%
! GATATATTTGTTCAGGAATA+AGG - chr6.1:29572415-29572434 None:intergenic 25.0%
! GCAAAACATAATTCAAGAAT+CGG + chr6.1:29571692-29571711 MS.gene94867:intron 25.0%
! TAAGTTCAGTTTCTGAATAA+GGG - chr6.1:29572890-29572909 None:intergenic 25.0%
! TAATACAAACATGATACCTT+GGG + chr6.1:29572011-29572030 MS.gene94867:intron 25.0%
! TATGGACAAAAAAACATTAG+CGG + chr6.1:29571898-29571917 MS.gene94867:intron 25.0%
!! CAATCTATGAATGATTTTTC+AGG + chr6.1:29572559-29572578 MS.gene94867:intron 25.0%
!! GAAAACAAGTTTTCAACATT+AGG - chr6.1:29572954-29572973 None:intergenic 25.0%
AACACTTGACTGTTATTGTT+TGG - chr6.1:29571554-29571573 None:intergenic 30.0%
ATGGACAAAAAAACATTAGC+GGG + chr6.1:29571899-29571918 MS.gene94867:intron 30.0%
ATTTGGTAAAATCCTAGATC+TGG - chr6.1:29571657-29571676 None:intergenic 30.0%
CCTTCAGAAAACAAACTTAT+TGG + chr6.1:29573053-29573072 MS.gene94867:CDS 30.0%
CTAATACAAACATGATACCT+TGG + chr6.1:29572010-29572029 MS.gene94867:intron 30.0%
GAAATAGAAAACCATCATTG+AGG - chr6.1:29573157-29573176 None:intergenic 30.0%
TATGTCAGAGGATTTCTTAT+TGG + chr6.1:29573121-29573140 MS.gene94867:CDS 30.0%
TTGAAACACAAACAAAACCT+AGG - chr6.1:29572095-29572114 None:intergenic 30.0%
! ATTGCATAATCTGAAATGGT+AGG - chr6.1:29571506-29571525 None:intergenic 30.0%
! GAGTATTGCATAATCTGAAA+TGG - chr6.1:29571510-29571529 None:intergenic 30.0%
! GCTTTTTGTGAATCTGAATT+TGG - chr6.1:29571674-29571693 None:intergenic 30.0%
! TTTTGAATGTGAAAAGACCT+TGG - chr6.1:29571934-29571953 None:intergenic 30.0%
!! CCAATAAGTTTGTTTTCTGA+AGG - chr6.1:29573056-29573075 None:intergenic 30.0%
!! TAAGTTTGTTTTCTGAAGGA+AGG - chr6.1:29573052-29573071 None:intergenic 30.0%
!!! ATACCTTGGGTTTTAAATAG+TGG + chr6.1:29572024-29572043 MS.gene94867:intron 30.0%
AAAATCCTAGATCTGGTGTT+GGG - chr6.1:29571650-29571669 None:intergenic 35.0%
AACATCATCACTAGTGTTCA+TGG + chr6.1:29571467-29571486 MS.gene94867:CDS 35.0%
AAGGGATTTCTGATTGACTA+GGG - chr6.1:29572872-29572891 None:intergenic 35.0%
ACAAAAAAGTGACACCAAAG+AGG + chr6.1:29572632-29572651 MS.gene94867:CDS 35.0%
ATAGAAAACCATCATTGAGG+TGG - chr6.1:29573154-29573173 None:intergenic 35.0%
ATATATCACTCATTTCAGGG+AGG + chr6.1:29572428-29572447 MS.gene94867:intron 35.0%
ATGAAAAACCAGCAGGTAAA+TGG + chr6.1:29572691-29572710 MS.gene94867:CDS 35.0%
ATTGAAATTATTGGTAGGCG+TGG - chr6.1:29571306-29571325 None:intergenic 35.0%
CAAACAAGCTTTCAGAAGAT+TGG + chr6.1:29571860-29571879 MS.gene94867:intron 35.0%
CGAGGATTGAAATTATTGGT+AGG - chr6.1:29571311-29571330 None:intergenic 35.0%
GAGTGAAAAAAGTTGTTGTG+GGG - chr6.1:29571400-29571419 None:intergenic 35.0%
GGAGTGAAAAAAGTTGTTGT+GGG - chr6.1:29571401-29571420 None:intergenic 35.0%
GGTACGAGGATTGAAATTAT+TGG - chr6.1:29571315-29571334 None:intergenic 35.0%
GTAAATGGAACTCTATTGGT+GGG + chr6.1:29572706-29572725 MS.gene94867:CDS 35.0%
GTGATTGATTGAGCTTTCTT+GGG - chr6.1:29571616-29571635 None:intergenic 35.0%
TAAAATCCTAGATCTGGTGT+TGG - chr6.1:29571651-29571670 None:intergenic 35.0%
TAAGACCACAATTAGTGCAA+TGG - chr6.1:29572071-29572090 None:intergenic 35.0%
TAAGGGATTTCTGATTGACT+AGG - chr6.1:29572873-29572892 None:intergenic 35.0%
TATATCACTCATTTCAGGGA+GGG + chr6.1:29572429-29572448 MS.gene94867:intron 35.0%
TCACCAAACATTTCAAAGCT+GGG + chr6.1:29572786-29572805 MS.gene94867:CDS 35.0%
TGAAATGGTAGGATATTGAC+TGG - chr6.1:29571495-29571514 None:intergenic 35.0%
TGATTGATTGAGCTTTCTTG+GGG - chr6.1:29571615-29571634 None:intergenic 35.0%
TGTGATTGATTGAGCTTTCT+TGG - chr6.1:29571617-29571636 None:intergenic 35.0%
TTGAAATTATTGGTAGGCGT+GGG - chr6.1:29571305-29571324 None:intergenic 35.0%
! AAAGCTTGTTTGTTCTCACA+TGG - chr6.1:29571852-29571871 None:intergenic 35.0%
! ACTAATTGTGGTCTTAACCT+AGG + chr6.1:29572075-29572094 MS.gene94867:intron 35.0%
! AGACCACTATTTAAAACCCA+AGG - chr6.1:29572030-29572049 None:intergenic 35.0%
! AGTGATGATGTTAGTCAAGT+TGG - chr6.1:29571459-29571478 None:intergenic 35.0%
!! ACTTTTGTTGTGACGTTTGT+TGG + chr6.1:29572657-29572676 MS.gene94867:CDS 35.0%
!! AGTCTTTGATGACTTGTTCT+GGG - chr6.1:29572736-29572755 None:intergenic 35.0%
!! TAGTCTTTGATGACTTGTTC+TGG - chr6.1:29572737-29572756 None:intergenic 35.0%
!!! ATTTACCTGCTGGTTTTTCA+TGG - chr6.1:29572692-29572711 None:intergenic 35.0%
AAGCATGACTGATATGTCAG+AGG + chr6.1:29573109-29573128 MS.gene94867:CDS 40.0%
AATTACCCAACACCAGATCT+AGG + chr6.1:29571642-29571661 MS.gene94867:intron 40.0%
AATTAGTGCAATGGCAAGGA+TGG - chr6.1:29572062-29572081 None:intergenic 40.0%
ACAAGCTTTCAGAAGATTGG+TGG + chr6.1:29571863-29571882 MS.gene94867:intron 40.0%
ACTTGAATATTCCTGCTCTC+TGG - chr6.1:29572846-29572865 None:intergenic 40.0%
AGGAAGGATTTGTGATTCAC+CGG - chr6.1:29573036-29573055 None:intergenic 40.0%
ATAGAGTTCCATTTACCTGC+TGG - chr6.1:29572702-29572721 None:intergenic 40.0%
ATGTGAAAAGACCTTGGATG+TGG - chr6.1:29571928-29571947 None:intergenic 40.0%
CGACTTGAAATTTCCAACAG+CGG - chr6.1:29572766-29572785 None:intergenic 40.0%
CGGAGTGAAAAAAGTTGTTG+TGG - chr6.1:29571402-29571421 None:intergenic 40.0%
GACTTGAAATTTCCAACAGC+GGG - chr6.1:29572765-29572784 None:intergenic 40.0%
GATTCAATTTCTCTAGCAGC+AGG - chr6.1:29572927-29572946 None:intergenic 40.0%
GATTGATTGAGCTTTCTTGG+GGG - chr6.1:29571614-29571633 None:intergenic 40.0%
GCAGGTAAATGGAACTCTAT+TGG + chr6.1:29572702-29572721 MS.gene94867:CDS 40.0%
GGTAAATGGAACTCTATTGG+TGG + chr6.1:29572705-29572724 MS.gene94867:CDS 40.0%
GTCACCAAACATTTCAAAGC+TGG + chr6.1:29572785-29572804 MS.gene94867:CDS 40.0%
TCTGACATATCAGTCATGCT+TGG - chr6.1:29573110-29573129 None:intergenic 40.0%
TGAAATTATTGGTAGGCGTG+GGG - chr6.1:29571304-29571323 None:intergenic 40.0%
TGATTCACCGGAGTAATCAT+GGG - chr6.1:29573024-29573043 None:intergenic 40.0%
TGTGAAAAGACCTTGGATGT+GGG - chr6.1:29571927-29571946 None:intergenic 40.0%
TTCTCTAGCAGCAGGTAAAT+GGG - chr6.1:29572919-29572938 None:intergenic 40.0%
TTTCTCTAGCAGCAGGTAAA+TGG - chr6.1:29572920-29572939 None:intergenic 40.0%
!! CACAACAAAAGTGTCCTCTT+TGG - chr6.1:29572649-29572668 None:intergenic 40.0%
!! GAACCCAGCTTTGAAATGTT+TGG - chr6.1:29572792-29572811 None:intergenic 40.0%
!! GATGATGTTAGTCAAGTTGG+TGG - chr6.1:29571456-29571475 None:intergenic 40.0%
!! GATTTTGACCACCTCAATGA+TGG + chr6.1:29573143-29573162 MS.gene94867:CDS 40.0%
AAGACTAGATTACCCGCTGT+TGG + chr6.1:29572750-29572769 MS.gene94867:CDS 45.0%
AGCAATGCCCATGATTACTC+CGG + chr6.1:29573014-29573033 MS.gene94867:CDS 45.0%
CACAACCATGAAAAACCAGC+AGG + chr6.1:29572684-29572703 MS.gene94867:CDS 45.0%
CCACAATTAGTGCAATGGCA+AGG - chr6.1:29572066-29572085 None:intergenic 45.0%
CCTTGCCATTGCACTAATTG+TGG + chr6.1:29572063-29572082 MS.gene94867:intron 45.0%
CTAATAGGTCCAGTAGTGGT+CGG - chr6.1:29571422-29571441 None:intergenic 45.0%
GTGAAAAGACCTTGGATGTG+GGG - chr6.1:29571926-29571945 None:intergenic 45.0%
GTGATTCACCGGAGTAATCA+TGG - chr6.1:29573025-29573044 None:intergenic 45.0%
TCATGGGAGTCAGTCTAGTT+GGG - chr6.1:29571355-29571374 None:intergenic 45.0%
TGGTGGTCGTGGACAAAATA+TGG + chr6.1:29571880-29571899 MS.gene94867:intron 45.0%
! TCATGGGCATTGCTACTCAT+TGG - chr6.1:29573008-29573027 None:intergenic 45.0%
! TTTCAGAAGATTGGTGGTCG+TGG + chr6.1:29571869-29571888 MS.gene94867:intron 45.0%
! TTTTTCACTCCGACCACTAC+TGG + chr6.1:29571410-29571429 MS.gene94867:CDS 45.0%
!! AAGGTGTTGGTAGTGGTCAT+GGG - chr6.1:29571371-29571390 None:intergenic 45.0%
!! CTTTGATGACTTGTTCTGGG+AGG - chr6.1:29572733-29572752 None:intergenic 45.0%
!! GATGTTAGTCAAGTTGGTGG+TGG - chr6.1:29571453-29571472 None:intergenic 45.0%
!!! TTAAGATAAATAAATTTTAT+GGG - chr6.1:29572365-29572384 None:intergenic 5.0%
!!! TTTAAGATAAATAAATTTTA+TGG - chr6.1:29572366-29572385 None:intergenic 5.0%
ACTCATTTCAGGGAGGGAGT+TGG + chr6.1:29572435-29572454 MS.gene94867:intron 50.0%
AGCTTTCTTGGGGGTTGTTG+TGG - chr6.1:29571605-29571624 None:intergenic 50.0%
AGGGCTAATAGGTCCAGTAG+TGG - chr6.1:29571426-29571445 None:intergenic 50.0%
ATGTCGATCATCCAGAGAGC+AGG + chr6.1:29572832-29572851 MS.gene94867:CDS 50.0%
CATGGGAGTCAGTCTAGTTG+GGG - chr6.1:29571354-29571373 None:intergenic 50.0%
CTCATTTCAGGGAGGGAGTT+GGG + chr6.1:29572436-29572455 MS.gene94867:intron 50.0%
GTCATGGGAGTCAGTCTAGT+TGG - chr6.1:29571356-29571375 None:intergenic 50.0%
! AGTTGTTGTGGGGTTAGCGA+AGG - chr6.1:29571390-29571409 None:intergenic 50.0%
!! GAAGGTGTTGGTAGTGGTCA+TGG - chr6.1:29571372-29571391 None:intergenic 50.0%
!! GTTAGCGAAGGTGTTGGTAG+TGG - chr6.1:29571378-29571397 None:intergenic 50.0%
!! TCAAGTTGGTGGTGGAGCTA+GGG - chr6.1:29571445-29571464 None:intergenic 50.0%
GTCAGTCTAGTTGGGGTGCA+AGG - chr6.1:29571347-29571366 None:intergenic 55.0%
TGGGGTGCAAGGAGTAGTGA+GGG - chr6.1:29571336-29571355 None:intergenic 55.0%
TTGGGGTGCAAGGAGTAGTG+AGG - chr6.1:29571337-29571356 None:intergenic 55.0%
TTGGTAGGCGTGGGGTTAAC+AGG - chr6.1:29571296-29571315 None:intergenic 55.0%
! CAAGGAGTAGTGAGGGTACG+AGG - chr6.1:29571329-29571348 None:intergenic 55.0%
! GTGGTGGAGCTAGGGCTAAT+AGG - chr6.1:29571437-29571456 None:intergenic 55.0%
! TGTGGGGTTAGCGAAGGTGT+TGG - chr6.1:29571384-29571403 None:intergenic 55.0%
!! GTCAAGTTGGTGGTGGAGCT+AGG - chr6.1:29571446-29571465 None:intergenic 55.0%
! TTAGCGGGTCCCCACATCCA+AGG + chr6.1:29571914-29571933 MS.gene94867:intron 60.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 29571245 29573181 29571245 ID=MS.gene94867
chr6.1 mRNA 29571245 29573181 29571245 ID=MS.gene94867.t1;Parent=MS.gene94867
chr6.1 exon 29571245 29571570 29571245 ID=MS.gene94867.t1.exon1;Parent=MS.gene94867.t1
chr6.1 CDS 29571245 29571570 29571245 ID=cds.MS.gene94867.t1;Parent=MS.gene94867.t1
chr6.1 exon 29572581 29573181 29572581 ID=MS.gene94867.t1.exon2;Parent=MS.gene94867.t1
chr6.1 CDS 29572581 29573181 29572581 ID=cds.MS.gene94867.t1;Parent=MS.gene94867.t1
Gene Sequence

>MS.gene94867

ATGCAATCAAATGGGCACGAGCTAAATAAATTTATATTCAACAAAAATCCTGTTAACCCCACGCCTACCAATAATTTCAATCCTCGTACCCTCACTACTCCTTGCACCCCAACTAGACTGACTCCCATGACCACTACCAACACCTTCGCTAACCCCACAACAACTTTTTTCACTCCGACCACTACTGGACCTATTAGCCCTAGCTCCACCACCAACTTGACTAACATCATCACTAGTGTTCATGGAACCAGTCAATATCCTACCATTTCAGATTATGCAATACTCATCAAACAACAACAAATTCAACCAAACAATAACAGTCAAGTGTTTGATCATGCATACAACTATTCATTTGTTCCACAACAACCCCCAAGAAAGCTCAATCAATCACAAATTCAATTACCCAACACCAGATCTAGGATTTTACCAAATTCAGATTCACAAAAAGCAAAACATAATTCAAGAATCGGGTAAATCATTTATTATTTTTATTTAAATTATTTTTATTATAAATCAATCTTAATGCATTTTAATGATCGAAACATTTAAATGATTTATCTTTCTTATCTTACAGAAAAATTAACAACAAGGTAACTTTGGAATGCCATGTGAGAACAAACAAGCTTTCAGAAGATTGGTGGTCGTGGACAAAATATGGACAAAAAAACATTAGCGGGTCCCCACATCCAAGGTCTTTTCACATTCAAAAATCTAACTTTTACGTATTCTTGTTTTATTTCATAATAAAAACAATAATTATGTGATCTAATACAAACATGATACCTTGGGTTTTAAATAGTGGTCTCTAGCATTACCATCCTTGCCATTGCACTAATTGTGGTCTTAACCTAGGTTTTGTTTGTGTTTCAATTTCAAAAACATAATAAATTAGTACTCTATTCTAAAAAATGCGTAACATATTTAAAAAATAAAAAATATGTTATAAAATGAGTGTCATTTTCAATATTCTATGTAATATCAAAATTAATGTATTTTTGGTTTAAGTACAAAATGGATCACTTTCTTCGTCTAATCCATGTAAAAGTTTTGATTGTTACTTTTATTCATTGCAAATATAACACCTTTTTATTTTTTCTTCTTGTTGTTTGTTTTTGTTCCCATAAAATTTATTTATCTTAAAATTAGTTCATGAATATTCATATTAATCCTTATTCCTGAACAAATATATCACTCATTTCAGGGAGGGAGTTGGGTTGTGACATTTATGTAAAACTTGACCAAATACACATATATTTTTAGTATATGATTTTAGCTATTAAAGTGATACGATTTAGAGGTGTTTGATATAGAAAACAATCTATGAATGATTTTTCAGGAGCTACTTTAAATGTAGCAGTTCTAAAGATTGTTCAGCAAAAAAACTAGTACAAAAAAGTGACACCAAAGAGGACACTTTTGTTGTGACGTTTGTTGGAGCACACAACCATGAAAAACCAGCAGGTAAATGGAACTCTATTGGTGGGACCTCCCAGAACAAGTCATCAAAGACTAGATTACCCGCTGTTGGAAATTTCAAGTCGTCACCAAACATTTCAAAGCTGGGTTCTCAAAATGTGACAATGATGCATGTCGATCATCCAGAGAGCAGGAATATTCAAGTTCTCCCTAGTCAATCAGAAATCCCTTATTCAGAAACTGAACTTATAGAGACCCATTTACCTGCTGCTAGAGAAATTGAATCATCTCCTAATGTTGAAAACTTGTTTTCATATGATGTGACGATGCTACAATCTGATGAGCCAATGAGTAGCAATGCCCATGATTACTCCGGTGAATCACAAATCCTTCCTTCAGAAAACAAACTTATTGGAAACTTTGATGACGATGAAGAAATTATGATACCAAGCATGACTGATATGTCAGAGGATTTCTTATTGGATTTTGACCACCTCAATGATGGTTTTCTATTTCCTTAG
Protein sequence

>MS.gene94867.t1

MQSNGHELNKFIFNKNPVNPTPTNNFNPRTLTTPCTPTRLTPMTTTNTFANPTTTFFTPTTTGPISPSSTTNLTNIITSVHGTSQYPTISDYAILIKQQQIQPNNNSQVSYFKCSSSKDCSAKKLVQKSDTKEDTFVVTFVGAHNHEKPAGKWNSIGGTSQNKSSKTRLPAVGNFKSSPNISKLGSQNVTMMHVDHPESRNIQVLPSQSEIPYSETELIETHLPAAREIESSPNVENLFSYDVTMLQSDEPMSSNAHDYSGESQILPSENKLIGNFDDDEEIMIPSMTDMSEDFLLDFDHLNDGFLFP