Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95130.t1 | XP_003610571.1 | 96.1 | 544 | 19 | 1 | 1 | 542 | 1 | 544 | 1.60E-303 | 1051.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95130.t1 | Q9M0M5 | 58.0 | 543 | 206 | 6 | 1 | 540 | 1 | 524 | 8.9e-165 | 581.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95130.t1 | G7JLR5 | 96.1 | 544 | 19 | 1 | 1 | 542 | 1 | 544 | 1.2e-303 | 1051.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene95130.t1 | TF | GRAS |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95130.t1 | MTR_4g133660 | 96.140 | 544 | 19 | 1 | 1 | 542 | 1 | 544 | 0.0 | 1094 |
MS.gene95130.t1 | MTR_2g026250 | 54.620 | 606 | 202 | 9 | 1 | 542 | 1 | 597 | 0.0 | 608 |
MS.gene95130.t1 | MTR_5g097480 | 57.013 | 549 | 221 | 7 | 1 | 540 | 1 | 543 | 0.0 | 605 |
MS.gene95130.t1 | MTR_5g094450 | 53.175 | 504 | 221 | 8 | 49 | 540 | 31 | 531 | 3.46e-180 | 518 |
MS.gene95130.t1 | MTR_3g056110 | 47.772 | 561 | 252 | 9 | 1 | 540 | 1 | 541 | 1.75e-175 | 506 |
MS.gene95130.t1 | MTR_2g082090 | 49.787 | 470 | 183 | 4 | 116 | 540 | 117 | 578 | 6.60e-159 | 465 |
MS.gene95130.t1 | MTR_1g029420 | 47.838 | 370 | 192 | 1 | 171 | 540 | 223 | 591 | 3.49e-130 | 392 |
MS.gene95130.t1 | MTR_3g089055 | 40.514 | 506 | 257 | 9 | 68 | 540 | 70 | 564 | 1.39e-126 | 382 |
MS.gene95130.t1 | MTR_3g089055 | 40.514 | 506 | 257 | 9 | 68 | 540 | 75 | 569 | 1.64e-126 | 382 |
MS.gene95130.t1 | MTR_7g027190 | 36.181 | 398 | 223 | 5 | 163 | 542 | 290 | 674 | 6.40e-73 | 245 |
MS.gene95130.t1 | MTR_3g065980 | 33.943 | 383 | 223 | 8 | 173 | 540 | 172 | 539 | 6.44e-67 | 226 |
MS.gene95130.t1 | MTR_7g057230 | 35.372 | 376 | 226 | 6 | 171 | 540 | 292 | 656 | 9.91e-65 | 223 |
MS.gene95130.t1 | MTR_4g064160 | 32.000 | 375 | 253 | 2 | 168 | 541 | 311 | 684 | 9.64e-64 | 221 |
MS.gene95130.t1 | MTR_7g062120 | 31.016 | 374 | 256 | 2 | 168 | 540 | 367 | 739 | 1.05e-61 | 216 |
MS.gene95130.t1 | MTR_4g064180 | 32.283 | 381 | 242 | 7 | 168 | 538 | 249 | 623 | 3.15e-61 | 213 |
MS.gene95130.t1 | MTR_4g064150 | 31.347 | 386 | 245 | 8 | 168 | 541 | 356 | 733 | 4.44e-61 | 214 |
MS.gene95130.t1 | MTR_2g097410 | 31.070 | 383 | 248 | 6 | 168 | 541 | 366 | 741 | 1.49e-60 | 213 |
MS.gene95130.t1 | MTR_4g064120 | 31.759 | 381 | 244 | 7 | 168 | 538 | 249 | 623 | 8.58e-60 | 209 |
MS.gene95130.t1 | MTR_2g097310 | 31.217 | 378 | 250 | 6 | 168 | 541 | 267 | 638 | 3.22e-58 | 205 |
MS.gene95130.t1 | MTR_2g097390 | 30.319 | 376 | 254 | 4 | 168 | 540 | 270 | 640 | 3.98e-58 | 204 |
MS.gene95130.t1 | MTR_2g097350 | 31.053 | 380 | 246 | 7 | 168 | 540 | 269 | 639 | 1.16e-57 | 203 |
MS.gene95130.t1 | MTR_4g064200 | 32.718 | 379 | 247 | 6 | 166 | 541 | 277 | 650 | 1.67e-56 | 200 |
MS.gene95130.t1 | MTR_2g097467 | 29.396 | 381 | 264 | 4 | 162 | 541 | 278 | 654 | 1.80e-56 | 200 |
MS.gene95130.t1 | MTR_2g097463 | 29.551 | 379 | 262 | 3 | 164 | 541 | 281 | 655 | 1.55e-55 | 198 |
MS.gene95130.t1 | MTR_7g074650 | 34.521 | 365 | 223 | 7 | 177 | 540 | 442 | 791 | 3.18e-55 | 199 |
MS.gene95130.t1 | MTR_2g097473 | 29.952 | 414 | 264 | 9 | 136 | 541 | 259 | 654 | 1.96e-54 | 195 |
MS.gene95130.t1 | MTR_6g047750 | 32.208 | 385 | 230 | 10 | 171 | 540 | 293 | 661 | 3.66e-54 | 194 |
MS.gene95130.t1 | MTR_8g442410 | 32.300 | 387 | 236 | 7 | 168 | 540 | 150 | 524 | 2.07e-53 | 189 |
MS.gene95130.t1 | MTR_4g097080 | 30.990 | 384 | 239 | 10 | 171 | 540 | 131 | 502 | 5.53e-52 | 185 |
MS.gene95130.t1 | MTR_4g104020 | 30.155 | 388 | 248 | 6 | 168 | 542 | 144 | 521 | 5.61e-51 | 182 |
MS.gene95130.t1 | MTR_3g022830 | 27.338 | 417 | 246 | 6 | 174 | 540 | 26 | 435 | 8.28e-49 | 175 |
MS.gene95130.t1 | MTR_4g102790 | 29.793 | 386 | 249 | 10 | 168 | 541 | 287 | 662 | 8.16e-46 | 171 |
MS.gene95130.t1 | MTR_4g077760 | 33.143 | 350 | 217 | 10 | 197 | 540 | 216 | 554 | 3.96e-44 | 164 |
MS.gene95130.t1 | MTR_1g096030 | 31.220 | 410 | 235 | 15 | 160 | 540 | 67 | 458 | 5.03e-44 | 162 |
MS.gene95130.t1 | MTR_1g069725 | 34.098 | 305 | 183 | 8 | 242 | 542 | 174 | 464 | 8.98e-44 | 162 |
MS.gene95130.t1 | MTR_2g097380 | 30.055 | 366 | 221 | 9 | 178 | 541 | 229 | 561 | 4.03e-43 | 162 |
MS.gene95130.t1 | MTR_5g015490 | 29.275 | 386 | 245 | 11 | 173 | 540 | 114 | 489 | 1.27e-42 | 159 |
MS.gene95130.t1 | MTR_5g058860 | 30.704 | 355 | 226 | 9 | 202 | 542 | 150 | 498 | 1.32e-40 | 154 |
MS.gene95130.t1 | MTR_2g034260 | 27.110 | 391 | 265 | 8 | 163 | 540 | 200 | 583 | 3.86e-40 | 154 |
MS.gene95130.t1 | MTR_3g072710 | 29.213 | 356 | 225 | 7 | 205 | 542 | 155 | 501 | 5.62e-40 | 152 |
MS.gene95130.t1 | MTR_4g076020 | 30.081 | 369 | 225 | 10 | 177 | 540 | 88 | 428 | 6.15e-40 | 150 |
MS.gene95130.t1 | MTR_2g034250 | 26.087 | 391 | 267 | 8 | 163 | 540 | 203 | 584 | 1.47e-37 | 146 |
MS.gene95130.t1 | MTR_2g089100 | 27.160 | 405 | 252 | 11 | 170 | 541 | 49 | 443 | 5.17e-36 | 140 |
MS.gene95130.t1 | MTR_2g099110 | 28.827 | 392 | 242 | 11 | 172 | 540 | 73 | 450 | 6.59e-36 | 139 |
MS.gene95130.t1 | MTR_4g095500 | 27.316 | 421 | 247 | 10 | 170 | 540 | 56 | 467 | 6.68e-35 | 137 |
MS.gene95130.t1 | MTR_2g034280 | 24.422 | 389 | 276 | 8 | 163 | 540 | 193 | 574 | 2.94e-34 | 137 |
MS.gene95130.t1 | MTR_5g015950 | 25.412 | 425 | 252 | 10 | 170 | 540 | 32 | 445 | 2.70e-32 | 129 |
MS.gene95130.t1 | MTR_3g053270 | 25.412 | 425 | 252 | 10 | 170 | 540 | 32 | 445 | 2.70e-32 | 129 |
MS.gene95130.t1 | MTR_7g109580 | 24.566 | 346 | 245 | 8 | 202 | 540 | 217 | 553 | 3.80e-28 | 118 |
MS.gene95130.t1 | MTR_4g026485 | 25.066 | 379 | 251 | 10 | 174 | 542 | 270 | 625 | 1.77e-26 | 114 |
MS.gene95130.t1 | MTR_5g009080 | 31.364 | 220 | 138 | 5 | 173 | 387 | 56 | 267 | 4.81e-26 | 111 |
MS.gene95130.t1 | MTR_5g009080 | 32.886 | 149 | 99 | 1 | 393 | 540 | 329 | 477 | 6.62e-22 | 99.4 |
MS.gene95130.t1 | MTR_8g093070 | 25.628 | 398 | 258 | 14 | 158 | 541 | 123 | 496 | 3.25e-25 | 109 |
MS.gene95130.t1 | MTR_4g076140 | 31.628 | 215 | 139 | 3 | 168 | 381 | 43 | 250 | 1.80e-24 | 107 |
MS.gene95130.t1 | MTR_4g076140 | 34.228 | 149 | 97 | 1 | 393 | 540 | 320 | 468 | 8.43e-22 | 99.0 |
MS.gene95130.t1 | MTR_0092s0100 | 24.409 | 381 | 252 | 9 | 174 | 542 | 373 | 729 | 6.40e-24 | 106 |
MS.gene95130.t1 | MTR_0092s0100 | 24.409 | 381 | 252 | 9 | 174 | 542 | 376 | 732 | 7.16e-24 | 106 |
MS.gene95130.t1 | MTR_1g086970 | 24.069 | 349 | 242 | 8 | 205 | 540 | 139 | 477 | 1.53e-23 | 104 |
MS.gene95130.t1 | MTR_8g020840 | 26.044 | 407 | 236 | 17 | 171 | 540 | 169 | 547 | 7.64e-22 | 99.8 |
MS.gene95130.t1 | MTR_8g077940 | 23.575 | 386 | 262 | 12 | 169 | 542 | 178 | 542 | 7.97e-20 | 93.2 |
MS.gene95130.t1 | MTR_3g022580 | 28.689 | 122 | 86 | 1 | 419 | 540 | 62 | 182 | 3.82e-12 | 65.5 |
MS.gene95130.t1 | MTR_3g022005 | 32.609 | 92 | 62 | 0 | 449 | 540 | 33 | 124 | 4.00e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95130.t1 | AT4G17230 | 61.368 | 497 | 177 | 5 | 47 | 540 | 40 | 524 | 0.0 | 606 |
MS.gene95130.t1 | AT4G17230 | 61.368 | 497 | 177 | 5 | 47 | 540 | 40 | 524 | 0.0 | 606 |
MS.gene95130.t1 | AT5G48150 | 54.076 | 503 | 208 | 7 | 46 | 540 | 2 | 489 | 0.0 | 523 |
MS.gene95130.t1 | AT5G48150 | 54.076 | 503 | 208 | 7 | 46 | 540 | 2 | 489 | 0.0 | 523 |
MS.gene95130.t1 | AT5G48150 | 54.076 | 503 | 208 | 7 | 46 | 540 | 2 | 489 | 0.0 | 523 |
MS.gene95130.t1 | AT5G48150 | 54.076 | 503 | 208 | 7 | 46 | 540 | 2 | 489 | 0.0 | 523 |
MS.gene95130.t1 | AT1G50600 | 56.250 | 448 | 189 | 4 | 94 | 540 | 84 | 525 | 4.41e-174 | 502 |
MS.gene95130.t1 | AT1G50600 | 56.250 | 448 | 189 | 4 | 94 | 540 | 159 | 600 | 2.60e-173 | 503 |
MS.gene95130.t1 | AT1G50600 | 56.250 | 448 | 189 | 4 | 94 | 540 | 155 | 596 | 2.71e-173 | 503 |
MS.gene95130.t1 | AT2G04890 | 55.961 | 411 | 169 | 4 | 130 | 540 | 14 | 412 | 1.90e-159 | 461 |
MS.gene95130.t1 | AT1G21450 | 42.793 | 444 | 238 | 4 | 112 | 540 | 150 | 592 | 1.86e-129 | 390 |
MS.gene95130.t1 | AT1G07530 | 33.867 | 375 | 245 | 3 | 169 | 541 | 392 | 765 | 1.19e-67 | 233 |
MS.gene95130.t1 | AT3G03450 | 36.119 | 371 | 223 | 9 | 174 | 540 | 184 | 544 | 1.81e-67 | 228 |
MS.gene95130.t1 | AT1G14920 | 34.127 | 378 | 216 | 9 | 174 | 540 | 173 | 528 | 1.64e-66 | 225 |
MS.gene95130.t1 | AT1G66350 | 34.677 | 372 | 216 | 10 | 174 | 540 | 156 | 505 | 2.92e-66 | 223 |
MS.gene95130.t1 | AT5G52510 | 36.311 | 347 | 196 | 7 | 209 | 540 | 303 | 639 | 1.02e-65 | 225 |
MS.gene95130.t1 | AT2G01570 | 34.127 | 378 | 216 | 9 | 174 | 540 | 225 | 580 | 5.44e-63 | 217 |
MS.gene95130.t1 | AT5G17490 | 33.777 | 376 | 227 | 9 | 170 | 540 | 157 | 515 | 2.95e-60 | 208 |
MS.gene95130.t1 | AT5G59450 | 30.526 | 380 | 253 | 5 | 168 | 540 | 222 | 597 | 2.38e-59 | 207 |
MS.gene95130.t1 | AT2G29060 | 30.622 | 418 | 275 | 5 | 131 | 541 | 246 | 655 | 2.74e-58 | 205 |
MS.gene95130.t1 | AT2G29060 | 30.622 | 418 | 275 | 5 | 131 | 541 | 283 | 692 | 3.96e-58 | 206 |
MS.gene95130.t1 | AT3G46600 | 30.108 | 372 | 257 | 3 | 170 | 540 | 1 | 370 | 4.28e-57 | 195 |
MS.gene95130.t1 | AT3G46600 | 30.400 | 375 | 256 | 4 | 168 | 540 | 207 | 578 | 7.85e-57 | 200 |
MS.gene95130.t1 | AT3G46600 | 30.214 | 374 | 258 | 3 | 168 | 540 | 175 | 546 | 1.22e-56 | 199 |
MS.gene95130.t1 | AT1G07520 | 31.070 | 383 | 253 | 8 | 168 | 541 | 149 | 529 | 6.21e-56 | 196 |
MS.gene95130.t1 | AT1G07520 | 31.070 | 383 | 253 | 8 | 168 | 541 | 149 | 529 | 6.21e-56 | 196 |
MS.gene95130.t1 | AT1G07520 | 31.070 | 383 | 253 | 8 | 168 | 541 | 313 | 693 | 3.04e-55 | 197 |
MS.gene95130.t1 | AT1G07520 | 31.070 | 383 | 253 | 8 | 168 | 541 | 314 | 694 | 3.37e-55 | 197 |
MS.gene95130.t1 | AT2G37650 | 29.412 | 374 | 260 | 3 | 168 | 540 | 330 | 700 | 5.05e-53 | 192 |
MS.gene95130.t1 | AT2G37650 | 29.412 | 374 | 260 | 3 | 168 | 540 | 342 | 712 | 5.36e-53 | 192 |
MS.gene95130.t1 | AT3G54220 | 34.054 | 370 | 223 | 9 | 177 | 541 | 297 | 650 | 1.52e-51 | 187 |
MS.gene95130.t1 | AT2G29065 | 30.287 | 383 | 257 | 7 | 168 | 541 | 247 | 628 | 1.63e-50 | 184 |
MS.gene95130.t1 | AT5G66770 | 33.908 | 348 | 212 | 7 | 201 | 540 | 246 | 583 | 2.25e-50 | 182 |
MS.gene95130.t1 | AT3G50650 | 32.092 | 349 | 219 | 7 | 201 | 540 | 202 | 541 | 1.82e-44 | 165 |
MS.gene95130.t1 | AT5G41920 | 29.275 | 386 | 240 | 10 | 166 | 540 | 36 | 399 | 1.36e-42 | 157 |
MS.gene95130.t1 | AT1G63100 | 30.398 | 352 | 220 | 6 | 207 | 541 | 286 | 629 | 3.64e-42 | 160 |
MS.gene95130.t1 | AT1G63100 | 30.398 | 352 | 220 | 6 | 207 | 541 | 311 | 654 | 4.03e-42 | 160 |
MS.gene95130.t1 | AT4G37650 | 29.771 | 393 | 241 | 12 | 173 | 540 | 146 | 528 | 8.53e-40 | 152 |
MS.gene95130.t1 | AT1G55580 | 30.421 | 309 | 191 | 7 | 247 | 540 | 145 | 444 | 2.27e-39 | 149 |
MS.gene95130.t1 | AT3G49950 | 26.992 | 389 | 258 | 12 | 170 | 540 | 27 | 407 | 4.46e-35 | 136 |
MS.gene95130.t1 | AT4G08250 | 26.706 | 337 | 239 | 5 | 208 | 540 | 144 | 476 | 2.70e-34 | 135 |
MS.gene95130.t1 | AT3G60630 | 27.011 | 348 | 227 | 9 | 207 | 542 | 291 | 623 | 4.08e-27 | 116 |
MS.gene95130.t1 | AT1G50420 | 32.558 | 215 | 135 | 3 | 168 | 379 | 52 | 259 | 7.61e-27 | 114 |
MS.gene95130.t1 | AT1G50420 | 33.775 | 151 | 99 | 1 | 393 | 542 | 330 | 480 | 1.48e-23 | 104 |
MS.gene95130.t1 | AT3G13840 | 26.316 | 361 | 229 | 13 | 196 | 540 | 170 | 509 | 1.94e-23 | 104 |
MS.gene95130.t1 | AT2G45160 | 26.966 | 356 | 212 | 13 | 207 | 542 | 313 | 640 | 3.83e-23 | 103 |
MS.gene95130.t1 | AT4G00150 | 23.195 | 457 | 302 | 14 | 97 | 542 | 137 | 555 | 2.89e-20 | 94.7 |
MS.gene95130.t1 | AT4G36710 | 25.193 | 389 | 251 | 13 | 168 | 540 | 120 | 484 | 1.41e-19 | 92.4 |
MS.gene95130.t1 | AT5G67411 | 29.146 | 199 | 128 | 6 | 291 | 478 | 2 | 198 | 1.01e-17 | 82.4 |
Find 140 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAAGTCCTTCAACATATTT+TGG | 0.122383 | 8.2:-1111320 | None:intergenic |
CTCCATCAGCTAAATATAAT+TGG | 0.146253 | 8.2:+1110257 | MS.gene95130:CDS |
TCTATGAAACCGGTGATTTC+TGG | 0.156389 | 8.2:-1109974 | None:intergenic |
AGGACTTCCATCAAAATTAT+AGG | 0.229164 | 8.2:+1111334 | MS.gene95130:CDS |
ACCCCTGTTATTCGAATAAA+AGG | 0.251389 | 8.2:-1110724 | None:intergenic |
AATCCGCTTCTTATCGTCTT+TGG | 0.262124 | 8.2:-1111136 | None:intergenic |
ATGTATGCAAACTTAAAATA+TGG | 0.291227 | 8.2:-1110571 | None:intergenic |
CACTGGACATACCGCTTAAC+GGG | 0.299460 | 8.2:-1110111 | None:intergenic |
AAACCGAGAGCAGCTGAATT+TGG | 0.309152 | 8.2:-1109827 | None:intergenic |
TCCTTTCTTTCAAAGGTTTG+TGG | 0.333187 | 8.2:+1111062 | MS.gene95130:CDS |
TGAGACTCTTGTGGAGAAAA+TGG | 0.334739 | 8.2:-1110040 | None:intergenic |
GGTGAAGCGTTGCTGCTTGT+AGG | 0.359696 | 8.2:-1109939 | None:intergenic |
TGATTTCTGGGTATGATTCC+AGG | 0.361344 | 8.2:-1109961 | None:intergenic |
CAGCACATAGATTGGTTTGT+AGG | 0.383859 | 8.2:-1109877 | None:intergenic |
CTCTTCTGCTTGGACGTGTT+AGG | 0.389557 | 8.2:+1111413 | MS.gene95130:CDS |
CAAACTAAAGGGAAAATTTA+CGG | 0.391093 | 8.2:-1110917 | None:intergenic |
AAAATCAATTATATGAATCC+TGG | 0.393012 | 8.2:-1110635 | None:intergenic |
TTTCTATCACCAACCTGCTC+AGG | 0.406462 | 8.2:+1109847 | MS.gene95130:CDS |
GTGAAGATGGTATCGGTTGC+TGG | 0.411075 | 8.2:+1110397 | MS.gene95130:CDS |
AGAAATAGAGAATTCATTGC+TGG | 0.413761 | 8.2:+1110168 | MS.gene95130:CDS |
AACGACTTTCAAACTTTGCC+AGG | 0.417891 | 8.2:+1110800 | MS.gene95130:CDS |
TAGAGACAGATTGTTGAGAT+TGG | 0.422530 | 8.2:+1110978 | MS.gene95130:CDS |
CTATGAAACCGGTGATTTCT+GGG | 0.422823 | 8.2:-1109973 | None:intergenic |
CGGCATATGGTGCAAACTAA+AGG | 0.425793 | 8.2:-1110929 | None:intergenic |
TTTGATATTGTTGACAGTTA+CGG | 0.438331 | 8.2:+1110202 | MS.gene95130:CDS |
TTCTGTCCAAAATATGTTGA+AGG | 0.440203 | 8.2:+1111314 | MS.gene95130:CDS |
ACACTGGACATACCGCTTAA+CGG | 0.441649 | 8.2:-1110112 | None:intergenic |
TCAACAAGGGTAACAACCTT+TGG | 0.445568 | 8.2:-1111015 | None:intergenic |
GAGGTTAAGTGCTTACTTGT+TGG | 0.446416 | 8.2:+1110432 | MS.gene95130:CDS |
TCCACAAACCTTTGAAAGAA+AGG | 0.448633 | 8.2:-1111063 | None:intergenic |
CAGAGCAGAACTGCGTGGCC+CGG | 0.448928 | 8.2:+1111163 | MS.gene95130:CDS |
TCCATCAGCTAAATATAATT+GGG | 0.450403 | 8.2:+1110258 | MS.gene95130:CDS |
GCTACCACCAGCACATAGAT+TGG | 0.452385 | 8.2:-1109885 | None:intergenic |
AGAGATGGTGCTCTCTATCT+TGG | 0.454465 | 8.2:+1111366 | MS.gene95130:CDS |
TGCTGGTGGTAGCAGCAGCC+AGG | 0.459468 | 8.2:+1109895 | MS.gene95130:CDS |
TTCCACAGCGCTGCAATGTC+TGG | 0.460279 | 8.2:+1110844 | MS.gene95130:CDS |
TTGAAAGAAAGGAGAAGTAT+TGG | 0.462842 | 8.2:-1111052 | None:intergenic |
TCGAATAAAAGGTGGTCCAC+CGG | 0.467899 | 8.2:-1110713 | None:intergenic |
TCCATCCAGCCTCTTGCTGT+TGG | 0.472205 | 8.2:-1110364 | None:intergenic |
GCATCACTGAAGAACTCAAT+TGG | 0.473571 | 8.2:-1111290 | None:intergenic |
TTACACTCTCATCCGGCATA+TGG | 0.477901 | 8.2:-1110942 | None:intergenic |
AGAGCAGAACTGCGTGGCCC+GGG | 0.478609 | 8.2:+1111164 | MS.gene95130:CDS |
CTTTAGTTTGCACCATATGC+CGG | 0.480501 | 8.2:+1110930 | MS.gene95130:CDS |
GGCATATGGTGCAAACTAAA+GGG | 0.480691 | 8.2:-1110928 | None:intergenic |
GTCATTAGCTCTTTGCTCGT+TGG | 0.480715 | 8.2:-1110520 | None:intergenic |
TGTAGGTAAATGCCCTGAGC+AGG | 0.480980 | 8.2:-1109860 | None:intergenic |
TCCCAATTATATTTAGCTGA+TGG | 0.481678 | 8.2:-1110259 | None:intergenic |
TAAGCACTTAACCTCTGGAT+TGG | 0.483912 | 8.2:-1110424 | None:intergenic |
ATACTTCTCCTTTCTTTCAA+AGG | 0.491697 | 8.2:+1111055 | MS.gene95130:CDS |
AGGGAGTTGAGAGGGTGGAG+AGG | 0.494885 | 8.2:+1111211 | MS.gene95130:CDS |
GGTGGAGGACTTCAGATTGT+AGG | 0.496448 | 8.2:+1110775 | MS.gene95130:CDS |
CGAAAGAAAGATCAGTTCCC+TGG | 0.499255 | 8.2:-1109913 | None:intergenic |
ATATTCCAACAGCAAGAGGC+TGG | 0.499931 | 8.2:+1110359 | MS.gene95130:CDS |
TCATTTCATGCACGCGGTGG+AGG | 0.506284 | 8.2:+1110760 | MS.gene95130:CDS |
CTATCATGTTGACGATGTCC+CGG | 0.506811 | 8.2:-1111182 | None:intergenic |
GAAGCGCTAGCACGCAGGCC+CGG | 0.507845 | 8.2:+1110694 | MS.gene95130:CDS |
CGAATAAAAGGTGGTCCACC+GGG | 0.511303 | 8.2:-1110712 | None:intergenic |
CTATGGCCACCTCTTCTGCT+TGG | 0.512179 | 8.2:+1111403 | MS.gene95130:CDS |
AAGCAATGGCAAATGAATCC+AGG | 0.513079 | 8.2:+1110617 | MS.gene95130:CDS |
GGATAATGTATTGGTGAAGA+TGG | 0.513962 | 8.2:+1110384 | MS.gene95130:CDS |
ACAAGTAAGCACTTAACCTC+TGG | 0.514019 | 8.2:-1110429 | None:intergenic |
CATTTCAAAGCTTGACATGA+AGG | 0.514416 | 8.2:+1110297 | MS.gene95130:CDS |
CGACTTGTAGATCAAGCTTC+CGG | 0.514475 | 8.2:-1110482 | None:intergenic |
TTAAGTGCTTACTTGTTGGA+AGG | 0.516488 | 8.2:+1110436 | MS.gene95130:CDS |
CACCCTCTCAACTCCCTCAC+AGG | 0.518699 | 8.2:-1111205 | None:intergenic |
GAAAGGAGAAGTATTGGTGT+TGG | 0.519467 | 8.2:-1111046 | None:intergenic |
AGAATCACAGTCTATGAAAC+CGG | 0.522986 | 8.2:-1109984 | None:intergenic |
TATCATGTTGACGATGTCCC+GGG | 0.523589 | 8.2:-1111181 | None:intergenic |
CAATCATCTGACAACACCTA+TGG | 0.525163 | 8.2:+1110085 | MS.gene95130:CDS |
AAACAGAACTCCACGAGACC+TGG | 0.526798 | 8.2:-1110818 | None:intergenic |
AGGCCAAATTCAGCTGCTCT+CGG | 0.528218 | 8.2:+1109824 | MS.gene95130:CDS |
TCAAACTTTGCCAGGTCTCG+TGG | 0.529305 | 8.2:+1110808 | MS.gene95130:CDS |
ATCATTCCCATCGTCAACAC+TGG | 0.531358 | 8.2:-1110128 | None:intergenic |
ATGGTGCTCTCTATCTTGGT+TGG | 0.532409 | 8.2:+1111370 | MS.gene95130:CDS |
ACCGCTTAACGGGGATCCAT+AGG | 0.533680 | 8.2:-1110101 | None:intergenic |
GGTTAAGAGTTTGTCGCCAA+AGG | 0.537523 | 8.2:+1110999 | MS.gene95130:CDS |
TTTACGGCGAGGGCTTCTCC+AGG | 0.538623 | 8.2:-1110901 | None:intergenic |
GAAATAGAGAATTCATTGCT+GGG | 0.540647 | 8.2:+1110169 | MS.gene95130:CDS |
CATAGGTGTTGTCAGATGAT+TGG | 0.540781 | 8.2:-1110084 | None:intergenic |
CTACAAACCAATCTATGTGC+TGG | 0.543214 | 8.2:+1109878 | MS.gene95130:CDS |
AGAGCAAGATTAGAATCGTC+CGG | 0.543631 | 8.2:+1110463 | MS.gene95130:CDS |
TGTGCACAAGCTGTCTATGA+TGG | 0.545177 | 8.2:+1110334 | MS.gene95130:CDS |
GAATTCATTGCTGGGGCCTG+AGG | 0.545314 | 8.2:+1110177 | MS.gene95130:CDS |
TGTTGGATTCTTGCTCAACA+AGG | 0.545794 | 8.2:-1111029 | None:intergenic |
GATTTCTGGGTATGATTCCA+GGG | 0.546662 | 8.2:-1109960 | None:intergenic |
TCCAACAGCAAGAGGCTGGA+TGG | 0.548787 | 8.2:+1110363 | MS.gene95130:CDS |
GAAAATCTTAGAGTTAGTCC+TGG | 0.549759 | 8.2:+1110883 | MS.gene95130:CDS |
TCTATGCTTACACTCTCATC+CGG | 0.551650 | 8.2:-1110949 | None:intergenic |
GCGCTAGCACGCAGGCCCGG+TGG | 0.554468 | 8.2:+1110697 | MS.gene95130:CDS |
AAAGGGAAAATTTACGGCGA+GGG | 0.556638 | 8.2:-1110911 | None:intergenic |
AGGCTGGATGGATAATGTAT+TGG | 0.564066 | 8.2:+1110375 | MS.gene95130:CDS |
TCAAAGGTTTGTGGAGACAA+TGG | 0.564383 | 8.2:+1111071 | MS.gene95130:CDS |
TAAGTGCTTACTTGTTGGAA+GGG | 0.566804 | 8.2:+1110437 | MS.gene95130:CDS |
TGACAGTTACGGCAGCTGCA+TGG | 0.566890 | 8.2:+1110213 | MS.gene95130:CDS |
CAGCTTGTGCACACAGCAAG+AGG | 0.573250 | 8.2:-1110324 | None:intergenic |
TTCTATCACCAACCTGCTCA+GGG | 0.576219 | 8.2:+1109848 | MS.gene95130:CDS |
TCAACAATATCAAAATCCTC+AGG | 0.578052 | 8.2:-1110193 | None:intergenic |
GCTGGTGGTAGCAGCAGCCA+GGG | 0.581099 | 8.2:+1109896 | MS.gene95130:CDS |
GTTAGATGATACACTGGCAT+AGG | 0.594598 | 8.2:-1110011 | None:intergenic |
TGCATGGAGACTAGCCTCCA+CGG | 0.598856 | 8.2:+1110229 | MS.gene95130:CDS |
GATGATACACTGGCATAGGA+AGG | 0.603436 | 8.2:-1110007 | None:intergenic |
GGTGATATTCCAACAGCAAG+AGG | 0.604701 | 8.2:+1110355 | MS.gene95130:CDS |
AGATGCAAATGTCTCAGCAA+AGG | 0.607032 | 8.2:+1109804 | None:intergenic |
CAAGCAGCAACGCTTCACCC+TGG | 0.609227 | 8.2:+1109943 | MS.gene95130:CDS |
GCATTGTCTAAATCCTGCCA+TGG | 0.611749 | 8.2:-1111268 | None:intergenic |
GTATGTCCAGTGTTGACGAT+GGG | 0.612286 | 8.2:+1110122 | MS.gene95130:CDS |
CAATCATTTCATGCACGCGG+TGG | 0.615401 | 8.2:+1110757 | MS.gene95130:CDS |
CAAACCAATCTATGTGCTGG+TGG | 0.616086 | 8.2:+1109881 | MS.gene95130:CDS |
GTTGGATTCTTGCTCAACAA+GGG | 0.617090 | 8.2:-1111028 | None:intergenic |
CTGTGAGGGAGTTGAGAGGG+TGG | 0.617736 | 8.2:+1111206 | MS.gene95130:CDS |
CTAACACGTCCAAGCAGAAG+AGG | 0.617768 | 8.2:-1111412 | None:intergenic |
ACCTATGGATCCCCGTTAAG+CGG | 0.622318 | 8.2:+1110100 | MS.gene95130:CDS |
GAATCATACCCAGAAATCAC+CGG | 0.623101 | 8.2:+1109965 | MS.gene95130:CDS |
AGGTGTTGTCAGATGATTGG+TGG | 0.624480 | 8.2:-1110081 | None:intergenic |
TATAGGCTTGAACATAGAGA+TGG | 0.624582 | 8.2:+1111351 | MS.gene95130:CDS |
TGGTTGGATGAAGAGAGCTA+TGG | 0.630176 | 8.2:+1111386 | MS.gene95130:CDS |
TGGCATGATTGAGACTCTTG+TGG | 0.635813 | 8.2:-1110049 | None:intergenic |
CGTCAACATGATAGCCTGTG+AGG | 0.636782 | 8.2:+1111191 | MS.gene95130:CDS |
GTCAACATGATAGCCTGTGA+GGG | 0.638925 | 8.2:+1111192 | MS.gene95130:CDS |
AGCCTGTGAGGGAGTTGAGA+GGG | 0.643951 | 8.2:+1111203 | MS.gene95130:CDS |
AGTCTTGTTAGATGATACAC+TGG | 0.645472 | 8.2:-1110017 | None:intergenic |
GGTATGTCCAGTGTTGACGA+TGG | 0.649722 | 8.2:+1110121 | MS.gene95130:CDS |
TGTATTGGTGAAGATGGTAT+CGG | 0.655186 | 8.2:+1110390 | MS.gene95130:CDS |
GCGCCAAAGACGATAAGAAG+CGG | 0.655603 | 8.2:+1111133 | MS.gene95130:CDS |
TAAAGGGAAAATTTACGGCG+AGG | 0.656398 | 8.2:-1110912 | None:intergenic |
CCTGTTATTCGAATAAAAGG+TGG | 0.661170 | 8.2:-1110721 | None:intergenic |
ACACGTCCAAGCAGAAGAGG+TGG | 0.661453 | 8.2:-1111409 | None:intergenic |
AACCAGACATTGCAGCGCTG+TGG | 0.666708 | 8.2:-1110846 | None:intergenic |
TCACAATCATTTCATGCACG+CGG | 0.666725 | 8.2:+1110754 | MS.gene95130:CDS |
AAATAGAGAATTCATTGCTG+GGG | 0.674391 | 8.2:+1110170 | MS.gene95130:CDS |
ACTGGACATACCGCTTAACG+GGG | 0.686166 | 8.2:-1110110 | None:intergenic |
GGTAAATGCCCTGAGCAGGT+TGG | 0.700911 | 8.2:-1109856 | None:intergenic |
CTGATGGAGATGCTCCGTGG+AGG | 0.702180 | 8.2:-1110243 | None:intergenic |
TAGCTGATGGAGATGCTCCG+TGG | 0.705467 | 8.2:-1110246 | None:intergenic |
AAATCGCACAGGGAACACAA+TGG | 0.711979 | 8.2:+1110659 | MS.gene95130:CDS |
TTGCTGGAGATCCAATCCAG+AGG | 0.713173 | 8.2:+1110413 | MS.gene95130:CDS |
TAGTGCAGAGCAGAACTGCG+TGG | 0.725432 | 8.2:+1111158 | MS.gene95130:CDS |
TTATTGAAGCGCTAGCACGC+AGG | 0.728511 | 8.2:+1110689 | MS.gene95130:CDS |
TAGCCTGTGAGGGAGTTGAG+AGG | 0.733893 | 8.2:+1111202 | MS.gene95130:CDS |
ATGATTGGTGGTGATCTGAG+TGG | 0.759324 | 8.2:-1110069 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATCAATTATATGAATCC+TGG | - | chr8.2:1110638-1110657 | None:intergenic | 20.0% |
!! | ATGTATGCAAACTTAAAATA+TGG | - | chr8.2:1110574-1110593 | None:intergenic | 20.0% |
! | CAAACTAAAGGGAAAATTTA+CGG | - | chr8.2:1110920-1110939 | None:intergenic | 25.0% |
! | TCCATCAGCTAAATATAATT+GGG | + | chr8.2:1110258-1110277 | MS.gene95130:CDS | 25.0% |
! | TTTGATATTGTTGACAGTTA+CGG | + | chr8.2:1110202-1110221 | MS.gene95130:CDS | 25.0% |
AAATAGAGAATTCATTGCTG+GGG | + | chr8.2:1110170-1110189 | MS.gene95130:CDS | 30.0% | |
AGAAATAGAGAATTCATTGC+TGG | + | chr8.2:1110168-1110187 | MS.gene95130:CDS | 30.0% | |
AGGACTTCCATCAAAATTAT+AGG | + | chr8.2:1111334-1111353 | MS.gene95130:CDS | 30.0% | |
ATACTTCTCCTTTCTTTCAA+AGG | + | chr8.2:1111055-1111074 | MS.gene95130:CDS | 30.0% | |
CTCCATCAGCTAAATATAAT+TGG | + | chr8.2:1110257-1110276 | MS.gene95130:CDS | 30.0% | |
GAAATAGAGAATTCATTGCT+GGG | + | chr8.2:1110169-1110188 | MS.gene95130:CDS | 30.0% | |
TCAACAATATCAAAATCCTC+AGG | - | chr8.2:1110196-1110215 | None:intergenic | 30.0% | |
TCCCAATTATATTTAGCTGA+TGG | - | chr8.2:1110262-1110281 | None:intergenic | 30.0% | |
TTCTGTCCAAAATATGTTGA+AGG | + | chr8.2:1111314-1111333 | MS.gene95130:CDS | 30.0% | |
! | ACCTTTTATTCGAATAACAG+GGG | + | chr8.2:1110723-1110742 | MS.gene95130:CDS | 30.0% |
! | CACCTTTTATTCGAATAACA+GGG | + | chr8.2:1110722-1110741 | MS.gene95130:CDS | 30.0% |
! | GTTCAAGCCTATAATTTTGA+TGG | - | chr8.2:1111344-1111363 | None:intergenic | 30.0% |
! | TTGAAAGAAAGGAGAAGTAT+TGG | - | chr8.2:1111055-1111074 | None:intergenic | 30.0% |
!! | AATTGATTTTCAAATCGCAC+AGG | + | chr8.2:1110648-1110667 | MS.gene95130:CDS | 30.0% |
!! | ATGAAGTTTTTGGAAAATGG+AGG | + | chr8.2:1111235-1111254 | MS.gene95130:CDS | 30.0% |
!! | ATTGATTTTCAAATCGCACA+GGG | + | chr8.2:1110649-1110668 | MS.gene95130:CDS | 30.0% |
!!! | GTCAAGCTTTGAAATGTTTT+CGG | - | chr8.2:1110293-1110312 | None:intergenic | 30.0% |
!!! | TGCTGTTATTTTTGAAGCAA+TGG | + | chr8.2:1110603-1110622 | MS.gene95130:CDS | 30.0% |
ACCCCTGTTATTCGAATAAA+AGG | - | chr8.2:1110727-1110746 | None:intergenic | 35.0% | |
AGAATCACAGTCTATGAAAC+CGG | - | chr8.2:1109987-1110006 | None:intergenic | 35.0% | |
CATTTCAAAGCTTGACATGA+AGG | + | chr8.2:1110297-1110316 | MS.gene95130:CDS | 35.0% | |
CCTGTTATTCGAATAAAAGG+TGG | - | chr8.2:1110724-1110743 | None:intergenic | 35.0% | |
GAAAATCTTAGAGTTAGTCC+TGG | + | chr8.2:1110883-1110902 | MS.gene95130:CDS | 35.0% | |
TAGAGACAGATTGTTGAGAT+TGG | + | chr8.2:1110978-1110997 | MS.gene95130:CDS | 35.0% | |
TATAGGCTTGAACATAGAGA+TGG | + | chr8.2:1111351-1111370 | MS.gene95130:CDS | 35.0% | |
TCCTTTCTTTCAAAGGTTTG+TGG | + | chr8.2:1111062-1111081 | MS.gene95130:CDS | 35.0% | |
! | CCACCTTTTATTCGAATAAC+AGG | + | chr8.2:1110721-1110740 | MS.gene95130:CDS | 35.0% |
! | GGAAGTCCTTCAACATATTT+TGG | - | chr8.2:1111323-1111342 | None:intergenic | 35.0% |
! | GGATAATGTATTGGTGAAGA+TGG | + | chr8.2:1110384-1110403 | MS.gene95130:CDS | 35.0% |
! | TAAGTGCTTACTTGTTGGAA+GGG | + | chr8.2:1110437-1110456 | MS.gene95130:CDS | 35.0% |
! | TCCACAAACCTTTGAAAGAA+AGG | - | chr8.2:1111066-1111085 | None:intergenic | 35.0% |
! | TGTATTGGTGAAGATGGTAT+CGG | + | chr8.2:1110390-1110409 | MS.gene95130:CDS | 35.0% |
! | TTAAGTGCTTACTTGTTGGA+AGG | + | chr8.2:1110436-1110455 | MS.gene95130:CDS | 35.0% |
!! | AGTCTTGTTAGATGATACAC+TGG | - | chr8.2:1110020-1110039 | None:intergenic | 35.0% |
!! | GGAGACAATGGATTTTTACA+CGG | + | chr8.2:1111083-1111102 | MS.gene95130:CDS | 35.0% |
!! | GGCATGAAGTTTTTGGAAAA+TGG | + | chr8.2:1111232-1111251 | MS.gene95130:CDS | 35.0% |
AAAGGGAAAATTTACGGCGA+GGG | - | chr8.2:1110914-1110933 | None:intergenic | 40.0% | |
AACGACTTTCAAACTTTGCC+AGG | + | chr8.2:1110800-1110819 | MS.gene95130:CDS | 40.0% | |
AAGCAATGGCAAATGAATCC+AGG | + | chr8.2:1110617-1110636 | MS.gene95130:CDS | 40.0% | |
AATCCGCTTCTTATCGTCTT+TGG | - | chr8.2:1111139-1111158 | None:intergenic | 40.0% | |
ACAAGTAAGCACTTAACCTC+TGG | - | chr8.2:1110432-1110451 | None:intergenic | 40.0% | |
AGAGCAAGATTAGAATCGTC+CGG | + | chr8.2:1110463-1110482 | MS.gene95130:CDS | 40.0% | |
AGGCTGGATGGATAATGTAT+TGG | + | chr8.2:1110375-1110394 | MS.gene95130:CDS | 40.0% | |
CAATCATCTGACAACACCTA+TGG | + | chr8.2:1110085-1110104 | MS.gene95130:CDS | 40.0% | |
CTACAAACCAATCTATGTGC+TGG | + | chr8.2:1109878-1109897 | MS.gene95130:CDS | 40.0% | |
CTATGAAACCGGTGATTTCT+GGG | - | chr8.2:1109976-1109995 | None:intergenic | 40.0% | |
GAATCATACCCAGAAATCAC+CGG | + | chr8.2:1109965-1109984 | MS.gene95130:CDS | 40.0% | |
GAGGTTAAGTGCTTACTTGT+TGG | + | chr8.2:1110432-1110451 | MS.gene95130:CDS | 40.0% | |
GCATCACTGAAGAACTCAAT+TGG | - | chr8.2:1111293-1111312 | None:intergenic | 40.0% | |
GGCATATGGTGCAAACTAAA+GGG | - | chr8.2:1110931-1110950 | None:intergenic | 40.0% | |
GTTAGATGATACACTGGCAT+AGG | - | chr8.2:1110014-1110033 | None:intergenic | 40.0% | |
GTTGGATTCTTGCTCAACAA+GGG | - | chr8.2:1111031-1111050 | None:intergenic | 40.0% | |
TAAAGGGAAAATTTACGGCG+AGG | - | chr8.2:1110915-1110934 | None:intergenic | 40.0% | |
TAAGCACTTAACCTCTGGAT+TGG | - | chr8.2:1110427-1110446 | None:intergenic | 40.0% | |
TCAAAGGTTTGTGGAGACAA+TGG | + | chr8.2:1111071-1111090 | MS.gene95130:CDS | 40.0% | |
TCAACAAGGGTAACAACCTT+TGG | - | chr8.2:1111018-1111037 | None:intergenic | 40.0% | |
TCACAATCATTTCATGCACG+CGG | + | chr8.2:1110754-1110773 | MS.gene95130:CDS | 40.0% | |
TCTATGAAACCGGTGATTTC+TGG | - | chr8.2:1109977-1109996 | None:intergenic | 40.0% | |
TCTATGCTTACACTCTCATC+CGG | - | chr8.2:1110952-1110971 | None:intergenic | 40.0% | |
TGAGACTCTTGTGGAGAAAA+TGG | - | chr8.2:1110043-1110062 | None:intergenic | 40.0% | |
TGTTGGATTCTTGCTCAACA+AGG | - | chr8.2:1111032-1111051 | None:intergenic | 40.0% | |
! | CATAGGTGTTGTCAGATGAT+TGG | - | chr8.2:1110087-1110106 | None:intergenic | 40.0% |
! | GATTTCTGGGTATGATTCCA+GGG | - | chr8.2:1109963-1109982 | None:intergenic | 40.0% |
! | TGATTTCTGGGTATGATTCC+AGG | - | chr8.2:1109964-1109983 | None:intergenic | 40.0% |
!! | CAGCACATAGATTGGTTTGT+AGG | - | chr8.2:1109880-1109899 | None:intergenic | 40.0% |
!! | CTTTAGTTTGCACCATATGC+CGG | + | chr8.2:1110930-1110949 | MS.gene95130:CDS | 40.0% |
!! | GAAAGGAGAAGTATTGGTGT+TGG | - | chr8.2:1111049-1111068 | None:intergenic | 40.0% |
AAACCGAGAGCAGCTGAATT+TGG | - | chr8.2:1109830-1109849 | None:intergenic | 45.0% | |
AAATCGCACAGGGAACACAA+TGG | + | chr8.2:1110659-1110678 | MS.gene95130:CDS | 45.0% | |
ACACTGGACATACCGCTTAA+CGG | - | chr8.2:1110115-1110134 | None:intergenic | 45.0% | |
AGAGATGGTGCTCTCTATCT+TGG | + | chr8.2:1111366-1111385 | MS.gene95130:CDS | 45.0% | |
ATATTCCAACAGCAAGAGGC+TGG | + | chr8.2:1110359-1110378 | MS.gene95130:CDS | 45.0% | |
ATCATTCCCATCGTCAACAC+TGG | - | chr8.2:1110131-1110150 | None:intergenic | 45.0% | |
ATGGTGCTCTCTATCTTGGT+TGG | + | chr8.2:1111370-1111389 | MS.gene95130:CDS | 45.0% | |
CAAACCAATCTATGTGCTGG+TGG | + | chr8.2:1109881-1109900 | MS.gene95130:CDS | 45.0% | |
CGAAAGAAAGATCAGTTCCC+TGG | - | chr8.2:1109916-1109935 | None:intergenic | 45.0% | |
CGACTTGTAGATCAAGCTTC+CGG | - | chr8.2:1110485-1110504 | None:intergenic | 45.0% | |
CGGCATATGGTGCAAACTAA+AGG | - | chr8.2:1110932-1110951 | None:intergenic | 45.0% | |
CTATCATGTTGACGATGTCC+CGG | - | chr8.2:1111185-1111204 | None:intergenic | 45.0% | |
GATGATACACTGGCATAGGA+AGG | - | chr8.2:1110010-1110029 | None:intergenic | 45.0% | |
GCATTGTCTAAATCCTGCCA+TGG | - | chr8.2:1111271-1111290 | None:intergenic | 45.0% | |
GGTGATATTCCAACAGCAAG+AGG | + | chr8.2:1110355-1110374 | MS.gene95130:CDS | 45.0% | |
GGTTAAGAGTTTGTCGCCAA+AGG | + | chr8.2:1110999-1111018 | MS.gene95130:CDS | 45.0% | |
GTCAACATGATAGCCTGTGA+GGG | + | chr8.2:1111192-1111211 | MS.gene95130:CDS | 45.0% | |
TATCATGTTGACGATGTCCC+GGG | - | chr8.2:1111184-1111203 | None:intergenic | 45.0% | |
TCGAATAAAAGGTGGTCCAC+CGG | - | chr8.2:1110716-1110735 | None:intergenic | 45.0% | |
TGGCATGATTGAGACTCTTG+TGG | - | chr8.2:1110052-1110071 | None:intergenic | 45.0% | |
TGGTTGGATGAAGAGAGCTA+TGG | + | chr8.2:1111386-1111405 | MS.gene95130:CDS | 45.0% | |
TGTGCACAAGCTGTCTATGA+TGG | + | chr8.2:1110334-1110353 | MS.gene95130:CDS | 45.0% | |
TTACACTCTCATCCGGCATA+TGG | - | chr8.2:1110945-1110964 | None:intergenic | 45.0% | |
TTCTATCACCAACCTGCTCA+GGG | + | chr8.2:1109848-1109867 | MS.gene95130:CDS | 45.0% | |
TTTCTATCACCAACCTGCTC+AGG | + | chr8.2:1109847-1109866 | MS.gene95130:CDS | 45.0% | |
! | AGGTGTTGTCAGATGATTGG+TGG | - | chr8.2:1110084-1110103 | None:intergenic | 45.0% |
! | ATGGAGGTCGAGATTTTCCA+TGG | + | chr8.2:1111251-1111270 | MS.gene95130:CDS | 45.0% |
! | GTCATTAGCTCTTTGCTCGT+TGG | - | chr8.2:1110523-1110542 | None:intergenic | 45.0% |
!! | ATGATTGGTGGTGATCTGAG+TGG | - | chr8.2:1110072-1110091 | None:intergenic | 45.0% |
!! | GTATGTCCAGTGTTGACGAT+GGG | + | chr8.2:1110122-1110141 | MS.gene95130:CDS | 45.0% |
!! | GTGGAGAGGCATGAAGTTTT+TGG | + | chr8.2:1111225-1111244 | MS.gene95130:CDS | 45.0% |
AAACAGAACTCCACGAGACC+TGG | - | chr8.2:1110821-1110840 | None:intergenic | 50.0% | |
ACCTATGGATCCCCGTTAAG+CGG | + | chr8.2:1110100-1110119 | MS.gene95130:CDS | 50.0% | |
ACTGGACATACCGCTTAACG+GGG | - | chr8.2:1110113-1110132 | None:intergenic | 50.0% | |
AGGCCAAATTCAGCTGCTCT+CGG | + | chr8.2:1109824-1109843 | MS.gene95130:CDS | 50.0% | |
CAATCATTTCATGCACGCGG+TGG | + | chr8.2:1110757-1110776 | MS.gene95130:CDS | 50.0% | |
CACTGGACATACCGCTTAAC+GGG | - | chr8.2:1110114-1110133 | None:intergenic | 50.0% | |
CGAATAAAAGGTGGTCCACC+GGG | - | chr8.2:1110715-1110734 | None:intergenic | 50.0% | |
CGTCAACATGATAGCCTGTG+AGG | + | chr8.2:1111191-1111210 | MS.gene95130:CDS | 50.0% | |
CTAACACGTCCAAGCAGAAG+AGG | - | chr8.2:1111415-1111434 | None:intergenic | 50.0% | |
GCGCCAAAGACGATAAGAAG+CGG | + | chr8.2:1111133-1111152 | MS.gene95130:CDS | 50.0% | |
GCTACCACCAGCACATAGAT+TGG | - | chr8.2:1109888-1109907 | None:intergenic | 50.0% | |
GGTGGAGGACTTCAGATTGT+AGG | + | chr8.2:1110775-1110794 | MS.gene95130:CDS | 50.0% | |
TCAAACTTTGCCAGGTCTCG+TGG | + | chr8.2:1110808-1110827 | MS.gene95130:CDS | 50.0% | |
TGTAGGTAAATGCCCTGAGC+AGG | - | chr8.2:1109863-1109882 | None:intergenic | 50.0% | |
TTGCTGGAGATCCAATCCAG+AGG | + | chr8.2:1110413-1110432 | MS.gene95130:CDS | 50.0% | |
! | AGGTCGAGATTTTCCATGGC+AGG | + | chr8.2:1111255-1111274 | MS.gene95130:CDS | 50.0% |
! | TTATTGAAGCGCTAGCACGC+AGG | + | chr8.2:1110689-1110708 | MS.gene95130:CDS | 50.0% |
!! | GGTATGTCCAGTGTTGACGA+TGG | + | chr8.2:1110121-1110140 | MS.gene95130:CDS | 50.0% |
!! | GTGAAGATGGTATCGGTTGC+TGG | + | chr8.2:1110397-1110416 | MS.gene95130:CDS | 50.0% |
AACCAGACATTGCAGCGCTG+TGG | - | chr8.2:1110849-1110868 | None:intergenic | 55.0% | |
ACACGTCCAAGCAGAAGAGG+TGG | - | chr8.2:1111412-1111431 | None:intergenic | 55.0% | |
ACCGCTTAACGGGGATCCAT+AGG | - | chr8.2:1110104-1110123 | None:intergenic | 55.0% | |
AGCCTGTGAGGGAGTTGAGA+GGG | + | chr8.2:1111203-1111222 | MS.gene95130:CDS | 55.0% | |
CAGCTTGTGCACACAGCAAG+AGG | - | chr8.2:1110327-1110346 | None:intergenic | 55.0% | |
CTATGGCCACCTCTTCTGCT+TGG | + | chr8.2:1111403-1111422 | MS.gene95130:CDS | 55.0% | |
GAATTCATTGCTGGGGCCTG+AGG | + | chr8.2:1110177-1110196 | MS.gene95130:CDS | 55.0% | |
GGTAAATGCCCTGAGCAGGT+TGG | - | chr8.2:1109859-1109878 | None:intergenic | 55.0% | |
TAGCCTGTGAGGGAGTTGAG+AGG | + | chr8.2:1111202-1111221 | MS.gene95130:CDS | 55.0% | |
TAGCTGATGGAGATGCTCCG+TGG | - | chr8.2:1110249-1110268 | None:intergenic | 55.0% | |
TAGTGCAGAGCAGAACTGCG+TGG | + | chr8.2:1111158-1111177 | MS.gene95130:CDS | 55.0% | |
TCATTTCATGCACGCGGTGG+AGG | + | chr8.2:1110760-1110779 | MS.gene95130:CDS | 55.0% | |
TCCAACAGCAAGAGGCTGGA+TGG | + | chr8.2:1110363-1110382 | MS.gene95130:CDS | 55.0% | |
TGACAGTTACGGCAGCTGCA+TGG | + | chr8.2:1110213-1110232 | MS.gene95130:CDS | 55.0% | |
TTCCACAGCGCTGCAATGTC+TGG | + | chr8.2:1110844-1110863 | MS.gene95130:CDS | 55.0% | |
! | TCCATCCAGCCTCTTGCTGT+TGG | - | chr8.2:1110367-1110386 | None:intergenic | 55.0% |
!! | GGTGAAGCGTTGCTGCTTGT+AGG | - | chr8.2:1109942-1109961 | None:intergenic | 55.0% |
!! | TGCATGGAGACTAGCCTCCA+CGG | + | chr8.2:1110229-1110248 | MS.gene95130:CDS | 55.0% |
AGGGAGTTGAGAGGGTGGAG+AGG | + | chr8.2:1111211-1111230 | MS.gene95130:CDS | 60.0% | |
CAAGCAGCAACGCTTCACCC+TGG | + | chr8.2:1109943-1109962 | MS.gene95130:CDS | 60.0% | |
CACCCTCTCAACTCCCTCAC+AGG | - | chr8.2:1111208-1111227 | None:intergenic | 60.0% | |
CTGATGGAGATGCTCCGTGG+AGG | - | chr8.2:1110246-1110265 | None:intergenic | 60.0% | |
CTGTGAGGGAGTTGAGAGGG+TGG | + | chr8.2:1111206-1111225 | MS.gene95130:CDS | 60.0% | |
TTTACGGCGAGGGCTTCTCC+AGG | - | chr8.2:1110904-1110923 | None:intergenic | 60.0% | |
AGAGCAGAACTGCGTGGCCC+GGG | + | chr8.2:1111164-1111183 | MS.gene95130:CDS | 65.0% | |
CAGAGCAGAACTGCGTGGCC+CGG | + | chr8.2:1111163-1111182 | MS.gene95130:CDS | 65.0% | |
GCTGGTGGTAGCAGCAGCCA+GGG | + | chr8.2:1109896-1109915 | MS.gene95130:CDS | 65.0% | |
TGCTGGTGGTAGCAGCAGCC+AGG | + | chr8.2:1109895-1109914 | MS.gene95130:CDS | 65.0% | |
! | GAAGCGCTAGCACGCAGGCC+CGG | + | chr8.2:1110694-1110713 | MS.gene95130:CDS | 70.0% |
! | GCGCTAGCACGCAGGCCCGG+TGG | + | chr8.2:1110697-1110716 | MS.gene95130:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 1109806 | 1111434 | 1109806 | ID=MS.gene95130 |
chr8.2 | mRNA | 1109806 | 1111434 | 1109806 | ID=MS.gene95130.t1;Parent=MS.gene95130 |
chr8.2 | exon | 1109806 | 1111434 | 1109806 | ID=MS.gene95130.t1.exon1;Parent=MS.gene95130.t1 |
chr8.2 | CDS | 1109806 | 1111434 | 1109806 | ID=cds.MS.gene95130.t1;Parent=MS.gene95130.t1 |
Gene Sequence |
Protein sequence |