Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95234.t1 | RHN43294.1 | 93.9 | 181 | 10 | 1 | 3 | 182 | 1 | 181 | 5.50E-89 | 337 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95234.t1 | Q9FYA2 | 54.5 | 134 | 52 | 2 | 46 | 173 | 6 | 136 | 3.7e-33 | 142.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95234.t1 | A0A396GUX8 | 93.9 | 181 | 10 | 1 | 3 | 182 | 1 | 181 | 4.0e-89 | 337.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene95234.t1 | TF | WRKY |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95234.t1 | MTR_8g096730 | 95.946 | 148 | 5 | 1 | 36 | 182 | 1 | 148 | 2.11e-102 | 291 |
MS.gene95234.t1 | MTR_7g028415 | 70.732 | 82 | 24 | 0 | 92 | 173 | 81 | 162 | 1.35e-41 | 138 |
MS.gene95234.t1 | MTR_7g028710 | 70.732 | 82 | 24 | 0 | 92 | 173 | 81 | 162 | 1.35e-41 | 138 |
MS.gene95234.t1 | MTR_7g079010 | 60.714 | 84 | 33 | 0 | 91 | 174 | 128 | 211 | 3.62e-33 | 118 |
MS.gene95234.t1 | MTR_3g104750 | 58.442 | 77 | 32 | 0 | 85 | 161 | 85 | 161 | 1.48e-29 | 107 |
MS.gene95234.t1 | MTR_1g015140 | 54.217 | 83 | 38 | 0 | 79 | 161 | 77 | 159 | 8.74e-29 | 105 |
MS.gene95234.t1 | MTR_7g011820 | 54.762 | 84 | 38 | 0 | 85 | 168 | 391 | 474 | 2.82e-27 | 107 |
MS.gene95234.t1 | MTR_7g011820 | 52.632 | 57 | 26 | 1 | 104 | 160 | 228 | 283 | 1.81e-15 | 73.9 |
MS.gene95234.t1 | MTR_5g042920 | 49.451 | 91 | 46 | 0 | 85 | 175 | 301 | 391 | 9.46e-27 | 105 |
MS.gene95234.t1 | MTR_5g042920 | 52.632 | 57 | 26 | 1 | 104 | 160 | 151 | 206 | 4.53e-14 | 69.7 |
MS.gene95234.t1 | MTR_8g007270 | 46.535 | 101 | 53 | 1 | 77 | 176 | 127 | 227 | 1.26e-26 | 101 |
MS.gene95234.t1 | MTR_2g033820 | 57.746 | 71 | 30 | 0 | 91 | 161 | 190 | 260 | 2.59e-26 | 103 |
MS.gene95234.t1 | MTR_5g094430 | 55.952 | 84 | 37 | 0 | 85 | 168 | 345 | 428 | 2.60e-26 | 105 |
MS.gene95234.t1 | MTR_5g094430 | 56.897 | 58 | 24 | 1 | 104 | 161 | 200 | 256 | 1.50e-16 | 77.0 |
MS.gene95234.t1 | MTR_3g031220 | 57.500 | 80 | 34 | 0 | 83 | 162 | 344 | 423 | 3.21e-26 | 104 |
MS.gene95234.t1 | MTR_3g031220 | 40.909 | 110 | 58 | 3 | 56 | 161 | 148 | 254 | 7.00e-19 | 84.0 |
MS.gene95234.t1 | MTR_5g094430 | 55.952 | 84 | 37 | 0 | 85 | 168 | 211 | 294 | 3.39e-26 | 103 |
MS.gene95234.t1 | MTR_5g094430 | 56.897 | 58 | 24 | 1 | 104 | 161 | 66 | 122 | 2.11e-16 | 76.3 |
MS.gene95234.t1 | MTR_5g094430 | 55.952 | 84 | 37 | 0 | 85 | 168 | 233 | 316 | 4.30e-26 | 103 |
MS.gene95234.t1 | MTR_5g094430 | 56.897 | 58 | 24 | 1 | 104 | 161 | 88 | 144 | 1.97e-16 | 76.6 |
MS.gene95234.t1 | MTR_4g013260 | 47.706 | 109 | 57 | 0 | 80 | 188 | 312 | 420 | 4.48e-26 | 103 |
MS.gene95234.t1 | MTR_4g013260 | 49.231 | 65 | 33 | 0 | 97 | 161 | 177 | 241 | 1.30e-15 | 74.3 |
MS.gene95234.t1 | MTR_5g043880 | 52.439 | 82 | 39 | 0 | 79 | 160 | 99 | 180 | 9.04e-26 | 100 |
MS.gene95234.t1 | MTR_3g056100 | 57.692 | 78 | 33 | 0 | 85 | 162 | 239 | 316 | 1.40e-25 | 102 |
MS.gene95234.t1 | MTR_3g056100 | 53.030 | 66 | 30 | 1 | 104 | 169 | 99 | 163 | 2.10e-17 | 79.3 |
MS.gene95234.t1 | MTR_3g056100 | 57.692 | 78 | 33 | 0 | 85 | 162 | 252 | 329 | 1.75e-25 | 102 |
MS.gene95234.t1 | MTR_3g056100 | 53.030 | 66 | 30 | 1 | 104 | 169 | 99 | 163 | 2.25e-17 | 79.3 |
MS.gene95234.t1 | MTR_4g082580 | 55.128 | 78 | 35 | 0 | 85 | 162 | 259 | 336 | 1.82e-25 | 101 |
MS.gene95234.t1 | MTR_4g082580 | 54.386 | 57 | 26 | 0 | 104 | 160 | 145 | 201 | 9.56e-16 | 74.3 |
MS.gene95234.t1 | MTR_5g074400 | 54.762 | 84 | 38 | 0 | 79 | 162 | 395 | 478 | 2.93e-25 | 102 |
MS.gene95234.t1 | MTR_5g074400 | 56.897 | 58 | 24 | 1 | 104 | 161 | 243 | 299 | 3.46e-16 | 76.3 |
MS.gene95234.t1 | MTR_4g094588 | 45.918 | 98 | 51 | 1 | 91 | 188 | 165 | 260 | 3.26e-25 | 100 |
MS.gene95234.t1 | MTR_1g086790 | 48.889 | 90 | 45 | 1 | 73 | 161 | 126 | 215 | 3.40e-25 | 99.8 |
MS.gene95234.t1 | MTR_7g071120 | 48.000 | 100 | 49 | 2 | 85 | 182 | 305 | 403 | 4.60e-25 | 101 |
MS.gene95234.t1 | MTR_7g071120 | 40.000 | 85 | 50 | 1 | 104 | 188 | 166 | 249 | 1.05e-14 | 71.6 |
MS.gene95234.t1 | MTR_3g095080 | 47.312 | 93 | 47 | 2 | 87 | 177 | 151 | 243 | 7.44e-25 | 97.4 |
MS.gene95234.t1 | MTR_7g109800 | 36.196 | 163 | 85 | 4 | 15 | 161 | 43 | 202 | 1.25e-24 | 97.8 |
MS.gene95234.t1 | MTR_3g095080 | 47.312 | 93 | 47 | 2 | 87 | 177 | 127 | 219 | 1.26e-24 | 96.3 |
MS.gene95234.t1 | MTR_3g009470 | 48.544 | 103 | 51 | 1 | 68 | 168 | 457 | 559 | 1.30e-24 | 100 |
MS.gene95234.t1 | MTR_3g009470 | 37.069 | 116 | 60 | 5 | 55 | 161 | 225 | 336 | 1.18e-15 | 74.7 |
MS.gene95234.t1 | MTR_8g092140 | 44.565 | 92 | 50 | 1 | 87 | 177 | 142 | 233 | 1.43e-24 | 96.3 |
MS.gene95234.t1 | MTR_4g122530 | 57.143 | 70 | 30 | 0 | 91 | 160 | 195 | 264 | 1.68e-24 | 99.0 |
MS.gene95234.t1 | MTR_3g056100 | 57.692 | 78 | 33 | 0 | 85 | 162 | 383 | 460 | 5.95e-24 | 98.6 |
MS.gene95234.t1 | MTR_3g056100 | 53.030 | 66 | 30 | 1 | 104 | 169 | 243 | 307 | 1.52e-17 | 80.1 |
MS.gene95234.t1 | MTR_3g056100 | 57.692 | 78 | 33 | 0 | 85 | 162 | 396 | 473 | 8.01e-24 | 98.2 |
MS.gene95234.t1 | MTR_3g056100 | 53.030 | 66 | 30 | 1 | 104 | 169 | 243 | 307 | 1.87e-17 | 79.7 |
MS.gene95234.t1 | MTR_7g080020 | 47.115 | 104 | 53 | 2 | 85 | 187 | 474 | 576 | 1.07e-23 | 97.8 |
MS.gene95234.t1 | MTR_7g080020 | 35.484 | 155 | 67 | 6 | 41 | 184 | 231 | 363 | 1.24e-15 | 74.7 |
MS.gene95234.t1 | MTR_3g095040 | 52.857 | 70 | 33 | 0 | 91 | 160 | 105 | 174 | 3.38e-23 | 92.0 |
MS.gene95234.t1 | MTR_7g080000 | 52.564 | 78 | 37 | 0 | 85 | 162 | 413 | 490 | 4.84e-23 | 95.9 |
MS.gene95234.t1 | MTR_7g080000 | 39.773 | 88 | 47 | 2 | 103 | 185 | 233 | 319 | 2.87e-14 | 70.5 |
MS.gene95234.t1 | MTR_5g091390 | 54.286 | 70 | 32 | 0 | 91 | 160 | 144 | 213 | 2.50e-22 | 92.0 |
MS.gene95234.t1 | MTR_4g132430 | 46.835 | 79 | 41 | 1 | 89 | 166 | 112 | 190 | 8.83e-22 | 90.9 |
MS.gene95234.t1 | MTR_7g110720 | 45.122 | 82 | 44 | 1 | 89 | 169 | 174 | 255 | 2.06e-21 | 90.5 |
MS.gene95234.t1 | MTR_7g110720 | 45.122 | 82 | 44 | 1 | 89 | 169 | 201 | 282 | 2.85e-21 | 90.1 |
MS.gene95234.t1 | MTR_8g092010 | 37.398 | 123 | 66 | 2 | 40 | 162 | 55 | 166 | 3.23e-21 | 86.3 |
MS.gene95234.t1 | MTR_4g132430 | 46.835 | 79 | 41 | 1 | 89 | 166 | 246 | 324 | 5.23e-21 | 89.7 |
MS.gene95234.t1 | MTR_2g023930 | 46.753 | 77 | 40 | 1 | 87 | 162 | 288 | 364 | 1.34e-20 | 88.6 |
MS.gene95234.t1 | MTR_5g097490 | 42.045 | 88 | 49 | 1 | 75 | 160 | 221 | 308 | 2.89e-20 | 87.0 |
MS.gene95234.t1 | MTR_5g097490 | 48.438 | 64 | 32 | 1 | 102 | 165 | 90 | 152 | 8.78e-13 | 65.9 |
MS.gene95234.t1 | MTR_3g053330 | 44.048 | 84 | 46 | 1 | 87 | 169 | 234 | 317 | 7.31e-20 | 86.7 |
MS.gene95234.t1 | MTR_2g088000 | 41.758 | 91 | 52 | 1 | 77 | 166 | 322 | 412 | 1.96e-19 | 85.5 |
MS.gene95234.t1 | MTR_2g105060 | 46.154 | 78 | 41 | 1 | 102 | 178 | 92 | 169 | 5.28e-19 | 81.6 |
MS.gene95234.t1 | MTR_3g031220 | 40.909 | 110 | 58 | 3 | 56 | 161 | 148 | 254 | 5.44e-19 | 83.6 |
MS.gene95234.t1 | MTR_4g049760 | 45.122 | 82 | 44 | 1 | 89 | 169 | 275 | 356 | 1.09e-18 | 83.2 |
MS.gene95234.t1 | MTR_7g100510 | 51.471 | 68 | 33 | 0 | 93 | 160 | 350 | 417 | 1.53e-18 | 82.8 |
MS.gene95234.t1 | MTR_7g100510 | 55.357 | 56 | 24 | 1 | 105 | 160 | 190 | 244 | 1.53e-15 | 73.9 |
MS.gene95234.t1 | MTR_2g105060 | 46.154 | 78 | 41 | 1 | 102 | 178 | 167 | 244 | 1.74e-18 | 81.6 |
MS.gene95234.t1 | MTR_1g077780 | 51.429 | 70 | 34 | 0 | 96 | 165 | 54 | 123 | 1.83e-18 | 78.2 |
MS.gene95234.t1 | MTR_4g049790 | 44.444 | 81 | 44 | 1 | 87 | 166 | 295 | 375 | 2.36e-18 | 82.4 |
MS.gene95234.t1 | MTR_4g130900 | 46.154 | 78 | 40 | 1 | 89 | 164 | 344 | 421 | 8.08e-18 | 80.9 |
MS.gene95234.t1 | MTR_7g009730 | 33.758 | 157 | 84 | 6 | 33 | 169 | 129 | 285 | 9.25e-18 | 80.5 |
MS.gene95234.t1 | MTR_3g106060 | 54.386 | 57 | 25 | 1 | 105 | 160 | 139 | 195 | 1.07e-17 | 79.0 |
MS.gene95234.t1 | MTR_7g062220 | 52.632 | 57 | 27 | 0 | 104 | 160 | 124 | 180 | 1.57e-17 | 79.0 |
MS.gene95234.t1 | MTR_4g094412 | 45.333 | 75 | 40 | 1 | 89 | 162 | 219 | 293 | 2.19e-17 | 79.3 |
MS.gene95234.t1 | MTR_4g094412 | 45.333 | 75 | 40 | 1 | 89 | 162 | 228 | 302 | 2.63e-17 | 79.3 |
MS.gene95234.t1 | MTR_1g078260 | 50.000 | 72 | 35 | 1 | 90 | 160 | 233 | 304 | 4.72e-17 | 78.6 |
MS.gene95234.t1 | MTR_2g045360 | 37.864 | 103 | 60 | 2 | 65 | 166 | 175 | 274 | 1.10e-16 | 77.4 |
MS.gene95234.t1 | MTR_4g007060 | 47.059 | 68 | 35 | 1 | 102 | 168 | 126 | 193 | 1.29e-16 | 75.9 |
MS.gene95234.t1 | MTR_4g007060 | 47.059 | 68 | 35 | 1 | 102 | 168 | 160 | 227 | 1.75e-16 | 75.9 |
MS.gene95234.t1 | MTR_4g107970 | 43.836 | 73 | 40 | 1 | 89 | 160 | 163 | 235 | 3.86e-16 | 75.9 |
MS.gene95234.t1 | MTR_4g107970 | 43.836 | 73 | 40 | 1 | 89 | 160 | 240 | 312 | 7.27e-16 | 75.1 |
MS.gene95234.t1 | MTR_3g009470 | 35.043 | 117 | 63 | 4 | 54 | 161 | 224 | 336 | 2.27e-15 | 73.6 |
MS.gene95234.t1 | MTR_1g013760 | 46.774 | 62 | 32 | 1 | 105 | 165 | 141 | 202 | 3.70e-15 | 72.0 |
MS.gene95234.t1 | MTR_5g097500 | 44.118 | 68 | 38 | 0 | 93 | 160 | 219 | 286 | 4.24e-15 | 72.0 |
MS.gene95234.t1 | MTR_6g086555 | 43.662 | 71 | 39 | 1 | 91 | 160 | 193 | 263 | 5.84e-15 | 72.4 |
MS.gene95234.t1 | MTR_1g009613 | 42.424 | 66 | 37 | 1 | 101 | 165 | 259 | 324 | 6.05e-14 | 68.9 |
MS.gene95234.t1 | MTR_4g127040 | 45.902 | 61 | 32 | 1 | 101 | 160 | 242 | 302 | 7.02e-14 | 68.9 |
MS.gene95234.t1 | MTR_5g067680 | 50.847 | 59 | 26 | 1 | 104 | 159 | 202 | 260 | 7.39e-14 | 68.9 |
MS.gene95234.t1 | MTR_8g027860 | 47.458 | 59 | 28 | 1 | 103 | 158 | 135 | 193 | 1.38e-13 | 68.2 |
MS.gene95234.t1 | MTR_1g013790 | 43.548 | 62 | 34 | 1 | 102 | 162 | 99 | 160 | 1.50e-13 | 67.4 |
MS.gene95234.t1 | MTR_3g090860 | 47.458 | 59 | 28 | 1 | 103 | 158 | 132 | 190 | 3.28e-13 | 67.0 |
MS.gene95234.t1 | MTR_7g073430 | 36.607 | 112 | 64 | 4 | 54 | 158 | 68 | 179 | 3.48e-13 | 66.6 |
MS.gene95234.t1 | MTR_7g117200 | 47.458 | 59 | 28 | 1 | 103 | 158 | 117 | 175 | 3.92e-13 | 66.6 |
MS.gene95234.t1 | MTR_5g074200 | 50.877 | 57 | 27 | 1 | 104 | 160 | 220 | 275 | 6.06e-13 | 66.2 |
MS.gene95234.t1 | MTR_7g073380 | 36.066 | 122 | 70 | 5 | 54 | 167 | 68 | 189 | 6.46e-13 | 65.9 |
MS.gene95234.t1 | MTR_4g047580 | 36.047 | 86 | 54 | 1 | 87 | 171 | 264 | 349 | 8.53e-13 | 66.2 |
MS.gene95234.t1 | MTR_8g099350 | 32.558 | 129 | 75 | 4 | 38 | 158 | 65 | 189 | 1.44e-12 | 65.5 |
MS.gene95234.t1 | MTR_4g094908 | 40.541 | 74 | 42 | 2 | 101 | 173 | 263 | 335 | 1.68e-12 | 65.1 |
MS.gene95234.t1 | MTR_7g109600 | 46.552 | 58 | 30 | 1 | 105 | 161 | 54 | 111 | 2.57e-12 | 63.9 |
MS.gene95234.t1 | MTR_8g028565 | 36.842 | 76 | 46 | 2 | 88 | 162 | 140 | 214 | 6.00e-12 | 63.5 |
MS.gene95234.t1 | MTR_5g016610 | 44.262 | 61 | 33 | 1 | 101 | 160 | 196 | 256 | 1.32e-11 | 62.0 |
MS.gene95234.t1 | MTR_8g098945 | 45.000 | 60 | 32 | 1 | 103 | 161 | 128 | 187 | 1.85e-11 | 61.6 |
MS.gene95234.t1 | MTR_2g075680 | 32.540 | 126 | 76 | 3 | 37 | 158 | 85 | 205 | 1.97e-11 | 61.6 |
MS.gene95234.t1 | MTR_2g075750 | 41.667 | 60 | 32 | 1 | 102 | 158 | 26 | 85 | 5.07e-11 | 59.3 |
MS.gene95234.t1 | MTR_2g032030 | 39.344 | 61 | 36 | 1 | 102 | 161 | 265 | 325 | 6.54e-11 | 60.5 |
MS.gene95234.t1 | MTR_1g070455 | 42.623 | 61 | 34 | 1 | 101 | 160 | 290 | 350 | 7.63e-11 | 60.5 |
MS.gene95234.t1 | MTR_8g067650 | 37.037 | 81 | 49 | 2 | 82 | 160 | 316 | 396 | 8.89e-11 | 60.5 |
MS.gene95234.t1 | MTR_2g032030 | 39.344 | 61 | 36 | 1 | 102 | 161 | 265 | 325 | 9.65e-11 | 60.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95234.t1 | AT5G13080 | 70.238 | 84 | 25 | 0 | 90 | 173 | 53 | 136 | 6.44e-42 | 138 |
MS.gene95234.t1 | AT3G01970 | 67.470 | 83 | 27 | 0 | 91 | 173 | 52 | 134 | 7.77e-38 | 127 |
MS.gene95234.t1 | AT1G64000 | 55.789 | 95 | 42 | 0 | 82 | 176 | 92 | 186 | 1.84e-34 | 120 |
MS.gene95234.t1 | AT5G41570 | 59.302 | 86 | 35 | 0 | 91 | 176 | 85 | 170 | 2.26e-32 | 115 |
MS.gene95234.t1 | AT2G46130 | 52.809 | 89 | 42 | 0 | 85 | 173 | 11 | 99 | 1.92e-30 | 107 |
MS.gene95234.t1 | AT5G49520 | 59.155 | 71 | 29 | 0 | 91 | 161 | 208 | 278 | 1.08e-26 | 105 |
MS.gene95234.t1 | AT2G30250 | 58.974 | 78 | 32 | 0 | 85 | 162 | 309 | 386 | 1.11e-26 | 104 |
MS.gene95234.t1 | AT2G30250 | 35.200 | 125 | 63 | 3 | 45 | 161 | 108 | 222 | 1.60e-13 | 68.2 |
MS.gene95234.t1 | AT5G64810 | 51.111 | 90 | 39 | 1 | 76 | 160 | 77 | 166 | 1.63e-26 | 100 |
MS.gene95234.t1 | AT1G69310 | 52.500 | 80 | 38 | 0 | 81 | 160 | 124 | 203 | 2.94e-26 | 102 |
MS.gene95234.t1 | AT1G69310 | 52.500 | 80 | 38 | 0 | 81 | 160 | 124 | 203 | 2.94e-26 | 102 |
MS.gene95234.t1 | AT1G69310 | 52.500 | 80 | 38 | 0 | 81 | 160 | 124 | 203 | 2.94e-26 | 102 |
MS.gene95234.t1 | AT4G26640 | 55.952 | 84 | 37 | 0 | 85 | 168 | 322 | 405 | 4.57e-26 | 104 |
MS.gene95234.t1 | AT4G26640 | 55.000 | 60 | 26 | 1 | 102 | 161 | 169 | 227 | 8.04e-17 | 77.8 |
MS.gene95234.t1 | AT4G26640 | 55.952 | 84 | 37 | 0 | 85 | 168 | 186 | 269 | 4.62e-26 | 103 |
MS.gene95234.t1 | AT4G26640 | 55.000 | 60 | 26 | 1 | 102 | 161 | 33 | 91 | 1.04e-16 | 77.4 |
MS.gene95234.t1 | AT4G26640 | 55.952 | 84 | 37 | 0 | 85 | 168 | 186 | 269 | 4.62e-26 | 103 |
MS.gene95234.t1 | AT4G26640 | 55.000 | 60 | 26 | 1 | 102 | 161 | 33 | 91 | 1.04e-16 | 77.4 |
MS.gene95234.t1 | AT4G26640 | 55.952 | 84 | 37 | 0 | 85 | 168 | 186 | 269 | 4.62e-26 | 103 |
MS.gene95234.t1 | AT4G26640 | 55.000 | 60 | 26 | 1 | 102 | 161 | 33 | 91 | 1.04e-16 | 77.4 |
MS.gene95234.t1 | AT4G26640 | 55.952 | 84 | 37 | 0 | 85 | 168 | 186 | 269 | 4.62e-26 | 103 |
MS.gene95234.t1 | AT4G26640 | 55.000 | 60 | 26 | 1 | 102 | 161 | 33 | 91 | 1.04e-16 | 77.4 |
MS.gene95234.t1 | AT4G26640 | 55.952 | 84 | 37 | 0 | 85 | 168 | 362 | 445 | 5.60e-26 | 104 |
MS.gene95234.t1 | AT4G26640 | 55.000 | 60 | 26 | 1 | 102 | 161 | 209 | 267 | 8.03e-17 | 77.8 |
MS.gene95234.t1 | AT4G26640 | 55.952 | 84 | 37 | 0 | 85 | 168 | 290 | 373 | 5.83e-26 | 103 |
MS.gene95234.t1 | AT4G26640 | 55.000 | 60 | 26 | 1 | 102 | 161 | 137 | 195 | 9.09e-17 | 77.8 |
MS.gene95234.t1 | AT2G44745 | 46.237 | 93 | 49 | 1 | 85 | 176 | 126 | 218 | 9.52e-26 | 99.0 |
MS.gene95234.t1 | AT1G13960 | 52.632 | 76 | 36 | 0 | 85 | 160 | 390 | 465 | 1.05e-25 | 103 |
MS.gene95234.t1 | AT1G13960 | 41.071 | 112 | 58 | 4 | 50 | 160 | 180 | 284 | 1.06e-18 | 83.2 |
MS.gene95234.t1 | AT5G07100 | 44.444 | 117 | 58 | 1 | 46 | 162 | 90 | 199 | 1.21e-25 | 98.6 |
MS.gene95234.t1 | AT5G07100 | 46.875 | 64 | 34 | 0 | 104 | 167 | 24 | 87 | 1.45e-14 | 69.3 |
MS.gene95234.t1 | AT5G07100 | 44.444 | 117 | 58 | 1 | 46 | 162 | 90 | 199 | 1.21e-25 | 98.6 |
MS.gene95234.t1 | AT5G07100 | 46.875 | 64 | 34 | 0 | 104 | 167 | 24 | 87 | 1.45e-14 | 69.3 |
MS.gene95234.t1 | AT5G07100 | 44.444 | 117 | 58 | 1 | 46 | 162 | 90 | 199 | 1.21e-25 | 98.6 |
MS.gene95234.t1 | AT5G07100 | 46.875 | 64 | 34 | 0 | 104 | 167 | 24 | 87 | 1.45e-14 | 69.3 |
MS.gene95234.t1 | AT5G07100 | 44.444 | 117 | 58 | 1 | 46 | 162 | 90 | 199 | 1.21e-25 | 98.6 |
MS.gene95234.t1 | AT5G07100 | 46.875 | 64 | 34 | 0 | 104 | 167 | 24 | 87 | 1.45e-14 | 69.3 |
MS.gene95234.t1 | AT1G13960 | 52.632 | 76 | 36 | 0 | 85 | 160 | 237 | 312 | 1.31e-25 | 101 |
MS.gene95234.t1 | AT1G13960 | 36.641 | 131 | 73 | 5 | 31 | 160 | 10 | 131 | 2.62e-18 | 81.6 |
MS.gene95234.t1 | AT2G46130 | 49.438 | 89 | 41 | 1 | 85 | 173 | 11 | 95 | 1.52e-25 | 95.1 |
MS.gene95234.t1 | AT2G03340 | 45.000 | 100 | 55 | 0 | 85 | 184 | 396 | 495 | 1.94e-25 | 102 |
MS.gene95234.t1 | AT2G03340 | 39.231 | 130 | 64 | 4 | 62 | 184 | 214 | 335 | 4.98e-18 | 81.3 |
MS.gene95234.t1 | AT5G26170 | 55.714 | 70 | 31 | 0 | 91 | 160 | 100 | 169 | 2.43e-25 | 96.7 |
MS.gene95234.t1 | AT4G39410 | 49.367 | 79 | 40 | 0 | 82 | 160 | 201 | 279 | 4.04e-25 | 99.4 |
MS.gene95234.t1 | AT5G07100 | 45.217 | 115 | 56 | 1 | 46 | 160 | 183 | 290 | 4.28e-25 | 99.4 |
MS.gene95234.t1 | AT5G07100 | 46.875 | 64 | 34 | 0 | 104 | 167 | 117 | 180 | 1.03e-14 | 71.2 |
MS.gene95234.t1 | AT2G38470 | 46.903 | 113 | 49 | 1 | 61 | 162 | 308 | 420 | 7.25e-25 | 100 |
MS.gene95234.t1 | AT2G38470 | 51.724 | 58 | 27 | 1 | 104 | 161 | 184 | 240 | 1.13e-14 | 71.6 |
MS.gene95234.t1 | AT5G56270 | 57.692 | 78 | 33 | 0 | 85 | 162 | 468 | 545 | 9.08e-25 | 100 |
MS.gene95234.t1 | AT5G56270 | 50.877 | 57 | 27 | 1 | 104 | 160 | 273 | 328 | 6.24e-15 | 72.4 |
MS.gene95234.t1 | AT3G01080 | 53.846 | 78 | 36 | 0 | 85 | 162 | 325 | 402 | 1.23e-24 | 99.8 |
MS.gene95234.t1 | AT3G01080 | 52.632 | 57 | 26 | 1 | 104 | 160 | 205 | 260 | 6.18e-15 | 72.4 |
MS.gene95234.t1 | AT3G01080 | 53.846 | 78 | 36 | 0 | 85 | 162 | 287 | 364 | 1.73e-24 | 99.4 |
MS.gene95234.t1 | AT3G01080 | 52.632 | 57 | 26 | 1 | 104 | 160 | 167 | 222 | 7.64e-15 | 72.0 |
MS.gene95234.t1 | AT1G29860 | 54.167 | 72 | 33 | 0 | 91 | 162 | 123 | 194 | 5.73e-24 | 95.9 |
MS.gene95234.t1 | AT2G47260 | 48.864 | 88 | 44 | 1 | 74 | 160 | 143 | 230 | 9.21e-24 | 96.3 |
MS.gene95234.t1 | AT4G18170 | 56.522 | 69 | 30 | 0 | 94 | 162 | 162 | 230 | 1.15e-23 | 95.5 |
MS.gene95234.t1 | AT4G26440 | 47.170 | 106 | 53 | 1 | 66 | 168 | 331 | 436 | 9.77e-23 | 95.1 |
MS.gene95234.t1 | AT4G26440 | 52.632 | 57 | 26 | 1 | 104 | 160 | 178 | 233 | 1.54e-16 | 77.0 |
MS.gene95234.t1 | AT5G46350 | 53.623 | 69 | 32 | 0 | 94 | 162 | 173 | 241 | 1.59e-22 | 92.8 |
MS.gene95234.t1 | AT3G62340 | 56.338 | 71 | 31 | 0 | 91 | 161 | 105 | 175 | 4.82e-22 | 90.5 |
MS.gene95234.t1 | AT4G04450 | 45.455 | 88 | 46 | 2 | 81 | 166 | 174 | 261 | 2.46e-21 | 90.5 |
MS.gene95234.t1 | AT1G69310 | 48.750 | 80 | 37 | 1 | 81 | 160 | 124 | 199 | 2.99e-21 | 88.6 |
MS.gene95234.t1 | AT4G04450 | 48.101 | 79 | 40 | 1 | 89 | 166 | 277 | 355 | 9.45e-21 | 89.4 |
MS.gene95234.t1 | AT2G04880 | 38.739 | 111 | 54 | 1 | 50 | 160 | 243 | 339 | 4.16e-20 | 87.0 |
MS.gene95234.t1 | AT2G04880 | 56.667 | 60 | 25 | 1 | 102 | 161 | 109 | 167 | 1.77e-17 | 79.7 |
MS.gene95234.t1 | AT2G04880 | 38.739 | 111 | 54 | 1 | 50 | 160 | 267 | 363 | 5.03e-20 | 87.0 |
MS.gene95234.t1 | AT2G04880 | 56.667 | 60 | 25 | 1 | 102 | 161 | 109 | 167 | 2.13e-17 | 79.7 |
MS.gene95234.t1 | AT1G62300 | 43.333 | 90 | 50 | 1 | 74 | 162 | 282 | 371 | 6.46e-20 | 87.0 |
MS.gene95234.t1 | AT4G22070 | 48.000 | 75 | 38 | 1 | 89 | 162 | 282 | 356 | 9.54e-20 | 86.3 |
MS.gene95234.t1 | AT4G22070 | 48.000 | 75 | 38 | 1 | 89 | 162 | 282 | 356 | 9.54e-20 | 86.3 |
MS.gene95234.t1 | AT4G22070 | 48.000 | 75 | 38 | 1 | 89 | 162 | 282 | 356 | 9.54e-20 | 86.3 |
MS.gene95234.t1 | AT4G22070 | 48.000 | 75 | 38 | 1 | 89 | 162 | 282 | 356 | 9.54e-20 | 86.3 |
MS.gene95234.t1 | AT2G21900 | 49.315 | 73 | 34 | 1 | 92 | 161 | 94 | 166 | 2.17e-19 | 82.0 |
MS.gene95234.t1 | AT2G37260 | 51.471 | 68 | 33 | 0 | 93 | 160 | 256 | 323 | 2.27e-19 | 84.3 |
MS.gene95234.t1 | AT2G37260 | 55.357 | 56 | 24 | 1 | 105 | 160 | 84 | 138 | 8.44e-14 | 68.9 |
MS.gene95234.t1 | AT2G37260 | 51.471 | 68 | 33 | 0 | 93 | 160 | 258 | 325 | 2.46e-19 | 84.3 |
MS.gene95234.t1 | AT2G37260 | 55.357 | 56 | 24 | 1 | 105 | 160 | 86 | 140 | 8.59e-14 | 68.9 |
MS.gene95234.t1 | AT2G37260 | 51.471 | 68 | 33 | 0 | 93 | 160 | 338 | 405 | 3.03e-19 | 84.7 |
MS.gene95234.t1 | AT2G37260 | 55.357 | 56 | 24 | 1 | 105 | 160 | 166 | 220 | 7.70e-14 | 69.3 |
MS.gene95234.t1 | AT4G01720 | 48.000 | 75 | 38 | 1 | 89 | 162 | 224 | 298 | 3.13e-19 | 84.7 |
MS.gene95234.t1 | AT1G55600 | 45.349 | 86 | 46 | 1 | 77 | 161 | 279 | 364 | 3.42e-19 | 84.7 |
MS.gene95234.t1 | AT4G30935 | 44.211 | 95 | 51 | 1 | 72 | 164 | 299 | 393 | 8.84e-19 | 83.6 |
MS.gene95234.t1 | AT5G15130 | 40.476 | 84 | 49 | 1 | 87 | 169 | 168 | 251 | 7.19e-18 | 80.9 |
MS.gene95234.t1 | AT5G15130 | 41.975 | 81 | 46 | 1 | 87 | 166 | 210 | 290 | 9.95e-18 | 80.5 |
MS.gene95234.t1 | AT1G68150 | 41.304 | 92 | 50 | 2 | 79 | 169 | 213 | 301 | 1.48e-17 | 79.7 |
MS.gene95234.t1 | AT1G18860 | 42.857 | 77 | 43 | 1 | 87 | 162 | 222 | 298 | 3.29e-17 | 79.0 |
MS.gene95234.t1 | AT1G80840 | 42.105 | 76 | 43 | 1 | 102 | 176 | 144 | 219 | 6.14e-17 | 77.0 |
MS.gene95234.t1 | AT5G24110 | 50.847 | 59 | 26 | 1 | 103 | 158 | 112 | 170 | 2.57e-16 | 75.5 |
MS.gene95234.t1 | AT4G31800 | 49.123 | 57 | 28 | 1 | 105 | 160 | 112 | 168 | 4.85e-16 | 73.9 |
MS.gene95234.t1 | AT4G31800 | 49.123 | 57 | 28 | 1 | 105 | 160 | 177 | 233 | 7.84e-16 | 74.3 |
MS.gene95234.t1 | AT3G01080 | 52.632 | 57 | 26 | 1 | 104 | 160 | 205 | 260 | 2.90e-15 | 72.8 |
MS.gene95234.t1 | AT2G25000 | 47.368 | 57 | 29 | 1 | 105 | 160 | 104 | 160 | 5.16e-15 | 70.9 |
MS.gene95234.t1 | AT2G25000 | 47.368 | 57 | 29 | 1 | 105 | 160 | 104 | 160 | 5.16e-15 | 70.9 |
MS.gene95234.t1 | AT2G25000 | 47.368 | 57 | 29 | 1 | 105 | 160 | 126 | 182 | 7.24e-15 | 70.9 |
MS.gene95234.t1 | AT5G43290 | 49.153 | 59 | 30 | 0 | 102 | 160 | 112 | 170 | 8.77e-15 | 70.9 |
MS.gene95234.t1 | AT2G25000 | 47.368 | 57 | 29 | 1 | 105 | 160 | 147 | 203 | 1.04e-14 | 70.9 |
MS.gene95234.t1 | AT4G11070 | 30.263 | 152 | 94 | 5 | 17 | 158 | 49 | 198 | 4.46e-14 | 69.3 |
MS.gene95234.t1 | AT4G12020 | 53.448 | 58 | 26 | 1 | 103 | 160 | 467 | 523 | 6.81e-14 | 69.7 |
MS.gene95234.t1 | AT4G12020 | 53.448 | 58 | 26 | 1 | 103 | 160 | 467 | 523 | 7.14e-14 | 69.7 |
MS.gene95234.t1 | AT4G12020 | 53.448 | 58 | 26 | 1 | 103 | 160 | 467 | 523 | 7.28e-14 | 69.7 |
MS.gene95234.t1 | AT4G12020 | 53.448 | 58 | 26 | 1 | 103 | 160 | 467 | 523 | 7.28e-14 | 69.7 |
MS.gene95234.t1 | AT4G12020 | 53.448 | 58 | 26 | 1 | 103 | 160 | 467 | 523 | 7.54e-14 | 69.7 |
MS.gene95234.t1 | AT4G12020 | 53.448 | 58 | 26 | 1 | 103 | 160 | 467 | 523 | 7.54e-14 | 69.7 |
MS.gene95234.t1 | AT4G12020 | 53.448 | 58 | 26 | 1 | 103 | 160 | 467 | 523 | 7.54e-14 | 69.7 |
MS.gene95234.t1 | AT4G12020 | 53.448 | 58 | 26 | 1 | 103 | 160 | 400 | 456 | 7.69e-14 | 69.7 |
MS.gene95234.t1 | AT4G12020 | 53.448 | 58 | 26 | 1 | 103 | 160 | 467 | 523 | 7.75e-14 | 69.7 |
MS.gene95234.t1 | AT4G12020 | 53.448 | 58 | 26 | 1 | 103 | 160 | 467 | 523 | 7.75e-14 | 69.7 |
MS.gene95234.t1 | AT1G69810 | 46.970 | 66 | 33 | 2 | 103 | 166 | 144 | 209 | 1.11e-13 | 68.2 |
MS.gene95234.t1 | AT4G12020 | 53.448 | 58 | 26 | 1 | 103 | 160 | 467 | 523 | 1.17e-13 | 68.9 |
MS.gene95234.t1 | AT1G69810 | 48.387 | 62 | 30 | 2 | 103 | 162 | 202 | 263 | 1.46e-13 | 68.2 |
MS.gene95234.t1 | AT4G11070 | 30.935 | 139 | 85 | 4 | 30 | 158 | 29 | 166 | 2.03e-13 | 67.4 |
MS.gene95234.t1 | AT4G23810 | 51.724 | 58 | 25 | 1 | 104 | 158 | 158 | 215 | 3.95e-13 | 66.6 |
MS.gene95234.t1 | AT3G56400 | 30.556 | 144 | 90 | 3 | 40 | 173 | 55 | 198 | 4.00e-13 | 66.6 |
MS.gene95234.t1 | AT5G01900 | 41.333 | 75 | 41 | 1 | 98 | 169 | 104 | 178 | 7.75e-13 | 65.5 |
MS.gene95234.t1 | AT4G31550 | 45.902 | 61 | 32 | 1 | 101 | 160 | 243 | 303 | 8.11e-13 | 65.9 |
MS.gene95234.t1 | AT4G31550 | 45.902 | 61 | 32 | 1 | 101 | 160 | 242 | 302 | 8.15e-13 | 65.9 |
MS.gene95234.t1 | AT2G24570 | 45.902 | 61 | 32 | 1 | 101 | 160 | 240 | 300 | 1.35e-12 | 65.1 |
MS.gene95234.t1 | AT4G24240 | 45.902 | 61 | 32 | 1 | 101 | 160 | 278 | 338 | 1.53e-12 | 65.1 |
MS.gene95234.t1 | AT5G45260 | 35.955 | 89 | 50 | 3 | 100 | 183 | 1202 | 1288 | 1.61e-12 | 65.5 |
MS.gene95234.t1 | AT2G30590 | 43.548 | 62 | 34 | 1 | 101 | 161 | 310 | 371 | 2.07e-12 | 65.1 |
MS.gene95234.t1 | AT2G40750 | 36.957 | 92 | 46 | 3 | 92 | 171 | 135 | 226 | 2.18e-12 | 64.7 |
MS.gene95234.t1 | AT2G23320 | 42.623 | 61 | 34 | 1 | 101 | 160 | 237 | 297 | 4.27e-12 | 63.9 |
MS.gene95234.t1 | AT5G52830 | 36.709 | 79 | 49 | 1 | 98 | 175 | 159 | 237 | 6.49e-12 | 63.5 |
MS.gene95234.t1 | AT4G01250 | 36.842 | 76 | 46 | 2 | 88 | 162 | 113 | 187 | 1.34e-11 | 62.4 |
MS.gene95234.t1 | AT1G30650 | 33.010 | 103 | 64 | 4 | 62 | 161 | 175 | 275 | 1.44e-11 | 62.8 |
MS.gene95234.t1 | AT4G23550 | 35.616 | 73 | 46 | 1 | 89 | 160 | 125 | 197 | 2.06e-11 | 61.6 |
MS.gene95234.t1 | AT1G66560 | 44.068 | 59 | 30 | 1 | 104 | 159 | 103 | 161 | 2.26e-11 | 61.2 |
MS.gene95234.t1 | AT2G40740 | 44.828 | 58 | 29 | 1 | 104 | 158 | 173 | 230 | 3.31e-11 | 61.2 |
MS.gene95234.t1 | AT2G34830 | 36.620 | 71 | 43 | 2 | 93 | 161 | 203 | 273 | 3.70e-11 | 61.2 |
MS.gene95234.t1 | AT2G40740 | 44.828 | 58 | 29 | 1 | 104 | 158 | 182 | 239 | 3.71e-11 | 60.8 |
MS.gene95234.t1 | AT1G29280 | 41.379 | 58 | 33 | 1 | 105 | 161 | 75 | 132 | 3.96e-11 | 60.5 |
MS.gene95234.t1 | AT2G34830 | 36.620 | 71 | 43 | 2 | 93 | 161 | 212 | 282 | 4.34e-11 | 61.2 |
MS.gene95234.t1 | AT5G28650 | 42.623 | 61 | 34 | 1 | 101 | 160 | 259 | 319 | 5.48e-11 | 60.8 |
Find 0 sgRNAs with CRISPR-Local
Find 134 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATATATATATATATATATA+TGG | - | 57544:101996-101977 | None:intergenic | 0.0% |
!! | AAAAAACAATATTGTTAATT+AGG | - | 57544:101858-101877 | None:intergenic | 10.0% |
!! | ATATATATATATATATATGG+TGG | - | 57544:101974-101993 | None:intergenic | 10.0% |
!!! | AAAAATAACAAAATTTTGAT+GGG | + | 57544:101817-101836 | MS.gene95234:intron | 10.0% |
!!! | ATTGTTTTTTATATAAACTA+AGG | + | 57544:101868-101887 | MS.gene95234:intron | 10.0% |
!! | AGAATATCTAAAAACTAAAA+AGG | + | 57544:103078-103097 | MS.gene95234:CDS | 15.0% |
!! | TAAAATTGAAACTACTATAA+TGG | + | 57544:102682-102701 | MS.gene95234:intron | 15.0% |
!! | TCAAGAAAATAAATAAACTA+TGG | - | 57544:102713-102732 | None:intergenic | 15.0% |
!! | TGAAATTCATTGAATATTAT+GGG | + | 57544:102626-102645 | MS.gene95234:intron | 15.0% |
!! | TTGAAATTCATTGAATATTA+TGG | + | 57544:102625-102644 | MS.gene95234:intron | 15.0% |
!!! | GAAAAATAACAAAATTTTGA+TGG | + | 57544:101816-101835 | MS.gene95234:intron | 15.0% |
!!! | TCAAAATTTTGTTATTTTTC+AGG | - | 57544:101816-101835 | None:intergenic | 15.0% |
!! | ACAATTAGATCATATTCATT+AGG | - | 57544:102140-102159 | None:intergenic | 20.0% |
!! | ATATATATATTATGTCGATG+CGG | + | 57544:101998-102017 | MS.gene95234:intron | 20.0% |
!! | TTTAATGTTAAACCAACTAA+TGG | + | 57544:103031-103050 | MS.gene95234:CDS | 20.0% |
!!! | CATTGATTTCGTTTTTTATT+TGG | - | 57544:102503-102522 | None:intergenic | 20.0% |
!!! | TTAGTTGGTTTAACATTAAA+AGG | - | 57544:103031-103050 | None:intergenic | 20.0% |
!!! | TTCATTTTGAAAACTATATG+AGG | + | 57544:102194-102213 | MS.gene95234:intron | 20.0% |
! | AAAATCAAGTTCACTAAACT+TGG | + | 57544:102551-102570 | MS.gene95234:intron | 25.0% |
! | AACAAAAATTAAACAAGGTC+AGG | - | 57544:103622-103641 | None:intergenic | 25.0% |
! | ACAAAAATTAAACAAGGTCA+GGG | - | 57544:103621-103640 | None:intergenic | 25.0% |
! | ACAAATATGTATTTCAAACG+AGG | + | 57544:103140-103159 | MS.gene95234:CDS | 25.0% |
! | GTTGGAACAAAAATTAAACA+AGG | - | 57544:103627-103646 | None:intergenic | 25.0% |
! | TATAATCATACTCATAATGC+AGG | + | 57544:102074-102093 | MS.gene95234:intron | 25.0% |
! | TCTTATTACTTCAAAACCAA+TGG | + | 57544:102958-102977 | MS.gene95234:CDS | 25.0% |
! | TTAAATTATCTACACCAAGT+AGG | - | 57544:102107-102126 | None:intergenic | 25.0% |
! | TTTCTAGATAGAATAGTTCT+TGG | - | 57544:103359-103378 | None:intergenic | 25.0% |
!!! | ATTTCACTTAAACTTGCTAT+AGG | + | 57544:102310-102329 | MS.gene95234:intron | 25.0% |
!!! | TGGTTTTGAAGTAATAAGAA+AGG | - | 57544:102957-102976 | None:intergenic | 25.0% |
!!! | TTTTTTTTGTGTTAACTCTC+CGG | + | 57544:103273-103292 | MS.gene95234:intron | 25.0% |
ACCAAACAATTGAGTTCAAA+TGG | - | 57544:103430-103449 | None:intergenic | 30.0% | |
ACCATTTGAACTCAATTGTT+TGG | + | 57544:103426-103445 | MS.gene95234:intron | 30.0% | |
AGGTAAAGAAACAAATCCAA+AGG | + | 57544:103697-103716 | MS.gene95234:CDS | 30.0% | |
ATGCATGTGTCGTATATAAT+GGG | - | 57544:102906-102925 | None:intergenic | 30.0% | |
ATGGAAAGAAAAGTGGAAAA+AGG | + | 57544:101777-101796 | MS.gene95234:intron | 30.0% | |
CAGATTGATATACTAGATGA+TGG | + | 57544:103166-103185 | MS.gene95234:CDS | 30.0% | |
CTAAAATTACATGCTGTTGA+AGG | - | 57544:101907-101926 | None:intergenic | 30.0% | |
CTGTAAGCAGAAAATAAAGT+TGG | - | 57544:103645-103664 | None:intergenic | 30.0% | |
TAAATAATGAGACGAACCTA+GGG | - | 57544:103240-103259 | None:intergenic | 30.0% | |
TAAATCCAAAATCGATGTAC+TGG | - | 57544:102603-102622 | None:intergenic | 30.0% | |
TAATGAAGTTTCTCAAGATC+TGG | - | 57544:103806-103825 | None:intergenic | 30.0% | |
TACTACAAATGCACTTATGA+AGG | + | 57544:103669-103688 | MS.gene95234:CDS | 30.0% | |
TATGCATGTGTCGTATATAA+TGG | - | 57544:102907-102926 | None:intergenic | 30.0% | |
TGAATATTAGAGCCATTAGT+TGG | - | 57544:103046-103065 | None:intergenic | 30.0% | |
TTAAATAATGAGACGAACCT+AGG | - | 57544:103241-103260 | None:intergenic | 30.0% | |
TTTGAAAACTATATGAGGAG+TGG | + | 57544:102199-102218 | MS.gene95234:intron | 30.0% | |
! | ACATTAAAAGGAGAAGCATA+TGG | - | 57544:103019-103038 | None:intergenic | 30.0% |
! | ATAATGGGAAAAAAGGATGT+AGG | - | 57544:102891-102910 | None:intergenic | 30.0% |
! | ATATACTAGATGATGGTTTC+CGG | + | 57544:103173-103192 | MS.gene95234:CDS | 30.0% |
! | CAACAGCATGTAATTTTAGA+GGG | + | 57544:101908-101927 | MS.gene95234:intron | 30.0% |
! | GAAATTGCTCGTATAGTTTT+AGG | - | 57544:102295-102314 | None:intergenic | 30.0% |
! | GTCGTATATAATGGGAAAAA+AGG | - | 57544:102898-102917 | None:intergenic | 30.0% |
! | TACGACACATGCATAATTTT+TGG | + | 57544:102912-102931 | MS.gene95234:CDS | 30.0% |
! | TCAACAGCATGTAATTTTAG+AGG | + | 57544:101907-101926 | MS.gene95234:intron | 30.0% |
AAAAAAGGGGTCCATATTAG+AGG | + | 57544:101948-101967 | MS.gene95234:intron | 35.0% | |
AACACTTCATGTTTCTCCAT+TGG | - | 57544:102977-102996 | None:intergenic | 35.0% | |
AAGGAGATGATGAAACATGT+GGG | - | 57544:102853-102872 | None:intergenic | 35.0% | |
ACGTGATATGGAAAGAAAAG+TGG | + | 57544:101770-101789 | MS.gene95234:intron | 35.0% | |
AGGTCAACATGGAATATACT+TGG | - | 57544:102257-102276 | None:intergenic | 35.0% | |
ATATATGGTGGCCTCTAATA+TGG | - | 57544:101962-101981 | None:intergenic | 35.0% | |
ATCTAATTGTCATTCCCTTG+AGG | + | 57544:102150-102169 | MS.gene95234:intron | 35.0% | |
ATTAACTCAACTCACCTCAA+GGG | - | 57544:102167-102186 | None:intergenic | 35.0% | |
ATTCCAAAAAATGAGCGATG+CGG | - | 57544:102041-102060 | None:intergenic | 35.0% | |
CAACATGGAATATACTTGGT+TGG | - | 57544:102253-102272 | None:intergenic | 35.0% | |
CATATGGTGAAGATGAGATA+GGG | - | 57544:103003-103022 | None:intergenic | 35.0% | |
GTAAGTGTTTCAACGTGATA+TGG | + | 57544:101758-101777 | MS.gene95234:intron | 35.0% | |
TAAGGAGATGATGAAACATG+TGG | - | 57544:102854-102873 | None:intergenic | 35.0% | |
TAGGTCAAGACTCGTAAATT+AGG | - | 57544:102340-102359 | None:intergenic | 35.0% | |
TATTAACTCAACTCACCTCA+AGG | - | 57544:102168-102187 | None:intergenic | 35.0% | |
TCGTGGAAACAACTTATGAA+GGG | + | 57544:103739-103758 | MS.gene95234:CDS | 35.0% | |
TGAAAGACAACAAATTCCCT+AGG | + | 57544:103221-103240 | MS.gene95234:CDS | 35.0% | |
TTAGGTCAAGACTCGTAAAT+AGG | - | 57544:102277-102296 | None:intergenic | 35.0% | |
! | ATGGTTGGTCCTTCAAAAAA+GGG | + | 57544:101934-101953 | MS.gene95234:intron | 35.0% |
! | TAGGATGCATGCATTTTCTA+AGG | - | 57544:102872-102891 | None:intergenic | 35.0% |
! | TTATTTCTTTGCCTCCTTTC+TGG | - | 57544:103114-103133 | None:intergenic | 35.0% |
!! | ATGTAATTTTAGAGGGTCCA+TGG | + | 57544:101915-101934 | MS.gene95234:intron | 35.0% |
!! | TCACTTAAACTTGCTATAGG+TGG | + | 57544:102313-102332 | MS.gene95234:intron | 35.0% |
!!! | AATATGGACCCCTTTTTTGA+AGG | - | 57544:101946-101965 | None:intergenic | 35.0% |
ACATGGAATTGGATTCGTGA+AGG | - | 57544:102397-102416 | None:intergenic | 40.0% | |
ATCCAAAATCGATGTACTGG+AGG | - | 57544:102600-102619 | None:intergenic | 40.0% | |
ATGAGACACACAACACAACA+TGG | - | 57544:102414-102433 | None:intergenic | 40.0% | |
ATTATGTCGATGCGGTACAA+AGG | + | 57544:102006-102025 | MS.gene95234:intron | 40.0% | |
CACACAACACAACATGGAAT+TGG | - | 57544:102408-102427 | None:intergenic | 40.0% | |
GACTCGTAAATAGGTCAACA+TGG | - | 57544:102268-102287 | None:intergenic | 40.0% | |
GCATATGGTGAAGATGAGAT+AGG | - | 57544:103004-103023 | None:intergenic | 40.0% | |
GCCAGACTAATCTTATCTCT+TGG | - | 57544:103337-103356 | None:intergenic | 40.0% | |
GTCGTGGAAACAACTTATGA+AGG | + | 57544:103738-103757 | MS.gene95234:CDS | 40.0% | |
TGAACTTCATGCGTGAAACA+TGG | - | 57544:102762-102781 | None:intergenic | 40.0% | |
TTCCAAAAAATGAGCGATGC+GGG | - | 57544:102040-102059 | None:intergenic | 40.0% | |
! | CATGGTTGGTCCTTCAAAAA+AGG | + | 57544:101933-101952 | MS.gene95234:intron | 40.0% |
! | GAGAAAGTATGGGGAAAAGA+TGG | + | 57544:103198-103217 | MS.gene95234:CDS | 40.0% |
! | GAGGAGTCTGAGTCAATTTT+AGG | - | 57544:102581-102600 | None:intergenic | 40.0% |
! | GCCAAGAGATAAGATTAGTC+TGG | + | 57544:103333-103352 | MS.gene95234:intron | 40.0% |
! | GGCTGCTGTTTAAACTATTG+CGG | - | 57544:102376-102395 | None:intergenic | 40.0% |
! | TGCTATTTGGTGGTTTAGAG+AGG | + | 57544:102224-102243 | MS.gene95234:intron | 40.0% |
! | TGGTTGGTCCTTCAAAAAAG+GGG | + | 57544:101935-101954 | MS.gene95234:intron | 40.0% |
! | TTGCGGCAGACATTTGAAAT+AGG | - | 57544:102359-102378 | None:intergenic | 40.0% |
! | TTTCAGCTGACTTCTCTACA+GGG | - | 57544:103776-103795 | None:intergenic | 40.0% |
!! | AATTTTAGAGGGTCCATGGT+TGG | + | 57544:101919-101938 | MS.gene95234:intron | 40.0% |
!!! | CTTTTTTGAAGGACCAACCA+TGG | - | 57544:101935-101954 | None:intergenic | 40.0% |
AAGGAGACTTCAAGCCAGAA+AGG | + | 57544:103097-103116 | MS.gene95234:CDS | 45.0% | |
ATGCACTTATGAAGGCTGCA+AGG | + | 57544:103677-103696 | MS.gene95234:CDS | 45.0% | |
GAGATGATGAAACATGTGGG+CGG | - | 57544:102850-102869 | None:intergenic | 45.0% | |
GGCAAGAAGGTCAATATGTG+TGG | - | 57544:102829-102848 | None:intergenic | 45.0% | |
TGGCCGAACTCCAGATTATT+GGG | - | 57544:103317-103336 | None:intergenic | 45.0% | |
TTGGCCGAACTCCAGATTAT+TGG | - | 57544:103318-103337 | None:intergenic | 45.0% | |
TTTCCCCATACTTTCTCCAC+CGG | - | 57544:103195-103214 | None:intergenic | 45.0% | |
! | ATGAGGAGTGGAGTGCTATT+TGG | + | 57544:102211-102230 | MS.gene95234:intron | 45.0% |
! | CTTTCAGCTGACTTCTCTAC+AGG | - | 57544:103777-103796 | None:intergenic | 45.0% |
! | GTTTCCGGTGGAGAAAGTAT+GGG | + | 57544:103188-103207 | MS.gene95234:CDS | 45.0% |
! | TACTAGATGATGGTTTCCGG+TGG | + | 57544:103176-103195 | MS.gene95234:CDS | 45.0% |
! | TGTTAACTCTCCGGTTCTGA+GGG | + | 57544:103282-103301 | MS.gene95234:intron | 45.0% |
! | TTTCCGGTGGAGAAAGTATG+GGG | + | 57544:103189-103208 | MS.gene95234:CDS | 45.0% |
!!! | ATGCAGGTTTTGAGCCTACT+TGG | + | 57544:102090-102109 | MS.gene95234:intron | 45.0% |
!!! | CTCCTCCAGTACATCGATTT+TGG | + | 57544:102595-102614 | MS.gene95234:intron | 45.0% |
!!! | TACCCGCATCGCTCATTTTT+TGG | + | 57544:102035-102054 | MS.gene95234:intron | 45.0% |
AAAATGAGCGATGCGGGTAC+TGG | - | 57544:102034-102053 | None:intergenic | 50.0% | |
GAGACTTCAAGCCAGAAAGG+AGG | + | 57544:103100-103119 | MS.gene95234:CDS | 50.0% | |
GCCGAACTCCAGATTATTGG+GGG | - | 57544:103315-103334 | None:intergenic | 50.0% | |
GGCCGAACTCCAGATTATTG+GGG | - | 57544:103316-103335 | None:intergenic | 50.0% | |
GGTTTCCGGTGGAGAAAGTA+TGG | + | 57544:103187-103206 | MS.gene95234:CDS | 50.0% | |
GTGTTAACTCTCCGGTTCTG+AGG | + | 57544:103281-103300 | MS.gene95234:intron | 50.0% | |
TTCCACGACCTGCTCATCTT+TGG | - | 57544:103727-103746 | None:intergenic | 50.0% | |
! | AAGGCACTCCAAAGATGAGC+AGG | + | 57544:103716-103735 | MS.gene95234:CDS | 50.0% |
! | GCCCCCAATAATCTGGAGTT+CGG | + | 57544:103311-103330 | MS.gene95234:intron | 50.0% |
!! | AGGAGTGGAGTGCTATTTGG+TGG | + | 57544:102214-102233 | MS.gene95234:intron | 50.0% |
!! | GCTCATCTTTGGAGTGCCTT+TGG | - | 57544:103716-103735 | None:intergenic | 50.0% |
CTCCAAAGATGAGCAGGTCG+TGG | + | 57544:103722-103741 | MS.gene95234:CDS | 55.0% | |
GAAACATGTGGGCGGCAAGA+AGG | - | 57544:102842-102861 | None:intergenic | 55.0% | |
GAAAGGGGCCCCCAATAATC+TGG | + | 57544:103304-103323 | MS.gene95234:intron | 55.0% | |
!! | ACTCTCCGGTTCTGAGGGAA+AGG | + | 57544:103287-103306 | MS.gene95234:intron | 55.0% |
!! | CTCTCCGGTTCTGAGGGAAA+GGG | + | 57544:103288-103307 | MS.gene95234:intron | 55.0% |
!! | TCTCCGGTTCTGAGGGAAAG+GGG | + | 57544:103289-103308 | MS.gene95234:intron | 55.0% |
GGGCCCCTTTCCCTCAGAAC+CGG | - | 57544:103295-103314 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
57544 | gene | 101755 | 103860 | 101755 | ID=MS.gene95234 |
57544 | mRNA | 101755 | 103860 | 101755 | ID=MS.gene95234.t1;Parent=MS.gene95234 |
57544 | exon | 101755 | 101757 | 101755 | ID=MS.gene95234.t1.exon1;Parent=MS.gene95234.t1 |
57544 | CDS | 101755 | 101757 | 101755 | ID=cds.MS.gene95234.t1;Parent=MS.gene95234.t1 |
57544 | exon | 102875 | 103242 | 102875 | ID=MS.gene95234.t1.exon2;Parent=MS.gene95234.t1 |
57544 | CDS | 102875 | 103242 | 102875 | ID=cds.MS.gene95234.t1;Parent=MS.gene95234.t1 |
57544 | exon | 103665 | 103860 | 103665 | ID=MS.gene95234.t1.exon3;Parent=MS.gene95234.t1 |
57544 | CDS | 103665 | 103860 | 103665 | ID=cds.MS.gene95234.t1;Parent=MS.gene95234.t1 |
Gene Sequence |
Protein sequence |