AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene95465

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene95465.t1 MTR_1g073170 96.094 256 10 0 1 256 1 256 0.0 506
MS.gene95465.t1 MTR_1g045610 63.258 264 88 5 2 264 3 258 2.30e-105 306
MS.gene95465.t1 MTR_1g110460 65.455 110 38 0 16 125 22 131 3.61e-52 172
MS.gene95465.t1 MTR_7g035075 68.571 105 33 0 21 125 15 119 6.30e-52 168
MS.gene95465.t1 MTR_6g006030 67.619 105 34 0 21 125 15 119 1.88e-51 167
MS.gene95465.t1 MTR_1g086510 68.571 105 33 0 21 125 22 126 2.41e-50 166
MS.gene95465.t1 MTR_1g086530 65.714 105 36 0 21 125 34 138 1.83e-49 164
MS.gene95465.t1 MTR_5g078140 42.523 214 114 4 21 227 13 224 5.57e-49 164
MS.gene95465.t1 MTR_4g478180 61.468 109 42 0 16 124 9 117 3.34e-48 163
MS.gene95465.t1 MTR_3g074520 61.468 109 42 0 16 124 8 116 1.27e-47 161
MS.gene95465.t1 MTR_4g063100 65.049 103 36 0 21 123 8 110 2.45e-47 158
MS.gene95465.t1 MTR_7g117730 63.810 105 38 0 22 126 14 118 2.07e-46 155
MS.gene95465.t1 MTR_4g102380 65.385 104 36 0 21 124 13 116 2.78e-46 156
MS.gene95465.t1 MTR_8g027345 65.385 104 36 0 22 125 14 117 4.23e-46 156
MS.gene95465.t1 MTR_3g097450 61.261 111 43 0 14 124 6 116 7.52e-46 155
MS.gene95465.t1 MTR_2g096380 58.929 112 46 0 15 126 1 112 9.58e-46 153
MS.gene95465.t1 MTR_4g073420 49.660 147 70 2 14 160 6 148 1.19e-45 155
MS.gene95465.t1 MTR_5g007370 55.963 109 48 0 16 124 8 116 1.69e-45 155
MS.gene95465.t1 MTR_4g121460 65.385 104 36 0 21 124 13 116 2.22e-45 155
MS.gene95465.t1 MTR_1g076150 57.522 113 48 0 21 133 13 125 5.31e-45 152
MS.gene95465.t1 MTR_2g033170 67.619 105 34 0 21 125 25 129 5.42e-45 154
MS.gene95465.t1 MTR_1g062940 38.565 223 120 6 21 237 7 218 5.63e-45 151
MS.gene95465.t1 MTR_1g085040 60.177 113 45 0 13 125 5 117 7.69e-45 155
MS.gene95465.t1 MTR_7g011170 63.462 104 38 0 21 124 13 116 9.29e-45 153
MS.gene95465.t1 MTR_4g125520 61.905 105 40 0 22 126 14 118 9.94e-45 153
MS.gene95465.t1 MTR_3g083540 63.208 106 39 0 21 126 42 147 1.10e-44 152
MS.gene95465.t1 MTR_2g097910 51.079 139 60 1 21 151 21 159 1.36e-44 153
MS.gene95465.t1 MTR_5g029840 56.780 118 51 0 21 138 13 130 1.84e-44 153
MS.gene95465.t1 MTR_8g095390 60.360 111 44 0 14 124 6 116 2.11e-44 152
MS.gene95465.t1 MTR_7g115650 58.095 105 44 0 21 125 13 117 2.73e-44 149
MS.gene95465.t1 MTR_3g065440 62.857 105 39 0 21 125 13 117 2.78e-44 152
MS.gene95465.t1 MTR_8g031360 60.952 105 40 1 21 124 14 118 5.30e-44 150
MS.gene95465.t1 MTR_7g076740 58.879 107 43 1 21 126 13 119 6.37e-44 150
MS.gene95465.t1 MTR_1g100653 58.095 105 44 0 21 125 13 117 6.87e-44 150
MS.gene95465.t1 MTR_2g011660 59.615 104 42 0 21 124 14 117 7.03e-44 152
MS.gene95465.t1 MTR_4g082230 61.468 109 42 0 16 124 8 116 1.31e-43 152
MS.gene95465.t1 MTR_5g079670 45.695 151 77 2 22 167 13 163 1.67e-43 147
MS.gene95465.t1 MTR_3g052450 60.185 108 43 0 16 123 36 143 1.76e-43 154
MS.gene95465.t1 MTR_2g034790 62.500 104 39 0 21 124 13 116 1.83e-43 150
MS.gene95465.t1 MTR_8g017440 57.143 112 48 0 13 124 5 116 2.11e-43 150
MS.gene95465.t1 MTR_2g089620 59.615 104 42 0 21 124 13 116 6.68e-43 149
MS.gene95465.t1 MTR_4g091490 58.654 104 43 0 21 124 14 117 7.49e-43 149
MS.gene95465.t1 MTR_1g043080 57.692 104 44 0 21 124 13 116 8.09e-43 146
MS.gene95465.t1 MTR_3g077110 48.551 138 69 1 19 156 11 146 8.82e-43 149
MS.gene95465.t1 MTR_0251s0050 48.592 142 72 1 21 161 14 155 1.06e-42 147
MS.gene95465.t1 MTR_3g052430 61.165 103 40 0 21 123 42 144 1.17e-42 152
MS.gene95465.t1 MTR_7g096930 58.654 104 43 0 21 124 13 116 1.37e-42 147
MS.gene95465.t1 MTR_1g043050 48.507 134 62 1 21 154 13 139 2.18e-42 145
MS.gene95465.t1 MTR_3g011610 57.391 115 49 0 11 125 28 142 2.52e-42 151
MS.gene95465.t1 MTR_4g123040 64.762 105 37 0 21 125 25 129 2.86e-42 147
MS.gene95465.t1 MTR_4g082290 61.538 104 40 0 21 124 13 116 3.07e-42 149
MS.gene95465.t1 MTR_1g112760 59.434 106 43 0 19 124 12 117 3.67e-42 144
MS.gene95465.t1 MTR_4g485530 59.223 103 42 0 22 124 14 116 3.73e-42 143
MS.gene95465.t1 MTR_2g099740 55.357 112 50 0 13 124 5 116 4.00e-42 148
MS.gene95465.t1 MTR_1g100667 54.918 122 52 1 19 140 12 130 4.46e-42 145
MS.gene95465.t1 MTR_6g012690 60.577 104 41 0 21 124 13 116 4.62e-42 147
MS.gene95465.t1 MTR_8g017540 56.250 112 49 0 13 124 51 162 6.48e-42 148
MS.gene95465.t1 MTR_8g042410 62.136 103 39 0 21 123 38 140 7.70e-42 150
MS.gene95465.t1 MTR_7g111290 62.500 104 39 0 13 116 5 108 1.02e-41 147
MS.gene95465.t1 MTR_8g017500 56.250 112 49 0 13 124 5 116 1.16e-41 146
MS.gene95465.t1 MTR_2g089450 46.980 149 73 3 21 165 13 159 1.72e-41 143
MS.gene95465.t1 MTR_3g039990 43.671 158 87 1 21 176 14 171 1.75e-41 144
MS.gene95465.t1 MTR_1g085640 56.637 113 49 0 13 125 5 117 2.15e-41 146
MS.gene95465.t1 MTR_7g110830 56.637 113 49 0 13 125 5 117 2.33e-41 145
MS.gene95465.t1 MTR_6g055910 56.881 109 47 0 15 123 9 117 3.58e-41 143
MS.gene95465.t1 MTR_0140s0030 45.695 151 79 1 21 168 14 164 3.66e-41 144
MS.gene95465.t1 MTR_0489s0020 45.695 151 79 1 21 168 14 164 3.66e-41 144
MS.gene95465.t1 MTR_2g064160 53.509 114 53 0 11 124 2 115 6.28e-41 143
MS.gene95465.t1 MTR_4g065017 58.559 111 46 0 18 128 15 125 6.40e-41 144
MS.gene95465.t1 MTR_7g010210 58.095 105 44 0 21 125 13 117 9.94e-41 141
MS.gene95465.t1 MTR_7g010210 58.095 105 44 0 21 125 13 117 1.03e-40 143
MS.gene95465.t1 MTR_1g021230 60.194 103 41 0 21 123 58 160 1.09e-40 145
MS.gene95465.t1 MTR_0008s0280 58.824 102 42 0 21 122 13 114 1.09e-40 140
MS.gene95465.t1 MTR_0008s0390 59.223 103 42 0 21 123 14 116 1.36e-40 141
MS.gene95465.t1 MTR_2g089420 60.748 107 41 1 21 126 12 118 3.34e-40 144
MS.gene95465.t1 MTR_4g105130 58.491 106 44 0 19 124 11 116 4.11e-40 142
MS.gene95465.t1 MTR_3g028740 54.955 111 50 0 15 125 17 127 4.67e-40 142
MS.gene95465.t1 MTR_7g087130 50.400 125 56 1 21 139 13 137 7.58e-40 141
MS.gene95465.t1 MTR_8g098860 54.867 113 51 0 13 125 5 117 7.85e-40 140
MS.gene95465.t1 MTR_8g020490 58.333 108 44 1 22 128 10 117 1.50e-39 138
MS.gene95465.t1 MTR_1g017000 52.727 110 51 1 16 124 8 117 1.66e-39 138
MS.gene95465.t1 MTR_8g017340 53.982 113 51 1 13 124 5 117 5.49e-39 142
MS.gene95465.t1 MTR_8g017390 53.982 113 51 1 13 124 5 117 5.86e-39 141
MS.gene95465.t1 MTR_3g461490 54.955 111 50 0 14 124 6 116 6.56e-39 138
MS.gene95465.t1 MTR_0008s0470 56.311 103 45 0 21 123 14 116 8.35e-39 137
MS.gene95465.t1 MTR_0063s0090 41.290 155 86 2 21 170 13 167 2.05e-38 134
MS.gene95465.t1 MTR_5g042030 57.692 104 44 0 21 124 8 111 2.07e-38 136
MS.gene95465.t1 MTR_6g009430 44.654 159 73 2 21 164 13 171 4.10e-38 136
MS.gene95465.t1 MTR_8g017350 53.097 113 52 1 13 124 5 117 4.20e-38 141
MS.gene95465.t1 MTR_1g017140 53.333 120 53 2 21 137 13 132 8.21e-38 135
MS.gene95465.t1 MTR_4g100720 53.913 115 50 1 22 136 15 126 9.86e-38 131
MS.gene95465.t1 MTR_5g010020 54.717 106 48 0 13 118 5 110 9.93e-38 135
MS.gene95465.t1 MTR_7g109320 63.462 104 38 0 21 124 13 116 1.48e-37 135
MS.gene95465.t1 MTR_0197s0010 47.692 130 64 1 25 154 6 131 1.52e-37 132
MS.gene95465.t1 MTR_6g012180 57.576 99 42 0 21 119 13 111 3.47e-37 134
MS.gene95465.t1 MTR_2g095520 59.596 99 39 1 21 118 13 111 6.76e-37 133
MS.gene95465.t1 MTR_5g078910 55.856 111 48 1 15 124 1 111 7.08e-37 132
MS.gene95465.t1 MTR_2g088170 61.165 103 40 0 21 123 30 132 8.47e-37 135
MS.gene95465.t1 MTR_4g057635 55.238 105 46 1 21 124 13 117 1.59e-36 132
MS.gene95465.t1 MTR_4g063100 73.973 73 19 0 51 123 9 81 1.73e-36 129
MS.gene95465.t1 MTR_7g102110 52.212 113 53 1 21 132 13 125 3.50e-36 130
MS.gene95465.t1 MTR_2g067420 56.566 99 43 0 21 119 15 113 4.60e-36 131
MS.gene95465.t1 MTR_3g103570 55.238 105 46 1 21 124 13 117 5.08e-36 131
MS.gene95465.t1 MTR_5g014990 45.985 137 70 2 21 156 13 146 6.30e-36 130
MS.gene95465.t1 MTR_5g079120 43.373 166 84 4 15 172 55 218 6.70e-36 130
MS.gene95465.t1 MTR_7g017260 35.648 216 125 6 21 232 26 231 2.79e-35 127
MS.gene95465.t1 MTR_6g090405 50.450 111 54 1 14 123 6 116 2.97e-35 127
MS.gene95465.t1 MTR_5g079290 54.808 104 47 0 21 124 18 121 4.91e-35 126
MS.gene95465.t1 MTR_5g079220 41.290 155 89 1 21 173 22 176 5.50e-35 127
MS.gene95465.t1 MTR_1g083630 54.206 107 49 0 19 125 11 117 1.16e-34 131
MS.gene95465.t1 MTR_2g096380 44.526 137 56 2 51 167 18 154 3.05e-34 123
MS.gene95465.t1 MTR_4g097570 55.670 97 42 1 21 116 13 109 5.12e-34 124
MS.gene95465.t1 MTR_5g078800 53.153 111 51 1 15 124 1 111 7.74e-34 123
MS.gene95465.t1 MTR_0001s0360 54.808 104 47 0 21 124 8 111 7.84e-34 123
MS.gene95465.t1 MTR_8g006470 50.962 104 50 1 16 118 6 109 3.47e-33 122
MS.gene95465.t1 MTR_4g097570 55.102 98 42 2 21 116 13 110 3.52e-33 122
MS.gene95465.t1 MTR_8g060940 54.000 100 46 0 21 120 8 107 5.98e-33 120
MS.gene95465.t1 MTR_5g088640 33.898 236 136 6 21 238 13 246 6.12e-33 121
MS.gene95465.t1 MTR_5g088080 36.316 190 113 4 21 204 13 200 8.56e-33 120
MS.gene95465.t1 MTR_5g088150 36.316 190 113 4 21 204 13 200 8.56e-33 120
MS.gene95465.t1 MTR_5g488210 36.316 190 113 4 21 204 13 200 8.56e-33 120
MS.gene95465.t1 MTR_5g078930 52.252 111 52 1 14 123 2 112 8.71e-33 119
MS.gene95465.t1 MTR_4g029540 42.537 134 72 2 21 149 11 144 1.16e-32 121
MS.gene95465.t1 MTR_5g488170 36.316 190 113 4 21 204 13 200 1.38e-32 119
MS.gene95465.t1 MTR_4g128670 54.545 99 44 1 21 118 13 111 1.61e-32 122
MS.gene95465.t1 MTR_0247s0040 52.475 101 48 0 21 121 8 108 4.92e-32 116
MS.gene95465.t1 MTR_5g078860 50.450 111 54 1 15 124 1 111 2.00e-31 118
MS.gene95465.t1 MTR_5g078950 51.485 101 49 0 21 121 8 108 3.02e-31 117
MS.gene95465.t1 MTR_5g062790 49.515 103 51 1 21 122 10 112 3.75e-31 117
MS.gene95465.t1 MTR_0193s0090 49.038 104 53 0 21 124 8 111 5.39e-31 114
MS.gene95465.t1 MTR_3g101290 50.485 103 48 2 22 123 37 137 8.14e-31 114
MS.gene95465.t1 MTR_6g055910 64.384 73 26 0 51 123 16 88 7.25e-30 113
MS.gene95465.t1 MTR_5g088610 48.113 106 54 1 21 125 10 115 1.25e-29 114
MS.gene95465.t1 MTR_5g016510 49.515 103 49 2 22 123 5 105 5.13e-29 112
MS.gene95465.t1 MTR_4g019370 49.515 103 49 2 22 123 38 138 1.59e-28 111
MS.gene95465.t1 MTR_4g094982 49.020 102 51 1 22 123 5 105 3.86e-28 108
MS.gene95465.t1 MTR_7g111290 70.149 67 20 0 51 117 1 67 6.74e-28 109
MS.gene95465.t1 MTR_5g070020 53.125 96 42 2 22 116 122 215 7.63e-28 109
MS.gene95465.t1 MTR_5g007300 55.263 76 34 0 21 96 65 140 1.05e-27 103
MS.gene95465.t1 MTR_6g015455 40.268 149 78 4 22 162 5 150 1.22e-27 112
MS.gene95465.t1 MTR_3g045430 46.154 104 56 0 21 124 14 117 2.07e-27 107
MS.gene95465.t1 MTR_5g049190 51.042 96 44 2 22 116 19 112 4.34e-27 105
MS.gene95465.t1 MTR_5g082910 49.000 100 48 2 22 120 19 116 1.16e-25 102
MS.gene95465.t1 MTR_7g061330 48.077 104 51 2 22 124 113 214 1.63e-25 105
MS.gene95465.t1 MTR_7g061330 37.963 108 65 2 19 125 58 164 5.69e-14 71.6
MS.gene95465.t1 MTR_7g461410 48.077 104 51 2 22 124 113 214 1.63e-25 105
MS.gene95465.t1 MTR_7g461410 37.963 108 65 2 19 125 58 164 5.69e-14 71.6
MS.gene95465.t1 MTR_3g463400 46.429 112 52 3 22 127 133 242 1.87e-25 104
MS.gene95465.t1 MTR_7g061330 48.077 104 51 2 22 124 77 178 2.04e-25 105
MS.gene95465.t1 MTR_7g061330 37.963 108 65 2 19 125 22 128 7.57e-14 71.2
MS.gene95465.t1 MTR_4g128190 31.780 236 129 7 21 241 12 230 5.43e-25 99.8
MS.gene95465.t1 MTR_4g105660 50.000 96 45 2 22 116 180 273 6.29e-25 102
MS.gene95465.t1 MTR_7g451170 37.870 169 87 7 22 182 191 349 6.40e-25 102
MS.gene95465.t1 MTR_3g110028 44.231 104 55 2 22 124 85 186 7.02e-25 103
MS.gene95465.t1 MTR_3g110028 33.645 107 69 2 19 124 30 135 5.49e-12 65.9
MS.gene95465.t1 MTR_1g026870 45.192 104 54 2 22 124 85 186 1.10e-24 103
MS.gene95465.t1 MTR_1g026870 33.645 107 69 2 19 124 30 135 4.01e-12 66.2
MS.gene95465.t1 MTR_3g077650 46.939 98 49 2 20 116 179 274 1.16e-24 102
MS.gene95465.t1 MTR_1g085880 48.113 106 53 2 19 122 10 115 6.07e-24 95.9
MS.gene95465.t1 MTR_7g037260 46.392 97 51 1 22 118 145 240 7.04e-24 99.0
MS.gene95465.t1 MTR_1g085770 48.113 106 53 2 19 122 10 115 2.00e-23 97.1
MS.gene95465.t1 MTR_6g074860 44.898 98 51 2 22 118 4 99 9.70e-23 94.0
MS.gene95465.t1 MTR_5g010650 50.000 96 45 2 22 116 110 203 1.03e-22 97.1
MS.gene95465.t1 MTR_1g057980 42.718 103 58 1 16 118 74 175 1.56e-22 94.4
MS.gene95465.t1 MTR_5g041570 40.000 115 66 2 22 135 134 246 3.47e-22 95.1
MS.gene95465.t1 MTR_4g088015 42.241 116 59 4 22 132 221 333 1.05e-21 94.0
MS.gene95465.t1 MTR_7g450950 33.793 145 89 3 22 166 157 294 1.22e-21 92.8
MS.gene95465.t1 MTR_7g061550 45.545 101 52 2 25 123 10 109 1.25e-21 92.8
MS.gene95465.t1 MTR_6g027340 39.796 98 56 2 22 118 16 111 2.66e-21 89.0
MS.gene95465.t1 MTR_4g082040 40.909 110 62 2 22 130 105 212 5.25e-21 91.7
MS.gene95465.t1 MTR_6g027360 37.838 111 65 3 9 118 66 173 6.45e-21 90.1
MS.gene95465.t1 MTR_3g089045 44.660 103 54 2 22 123 16 116 3.39e-20 87.8
MS.gene95465.t1 MTR_7g035350 43.158 95 51 2 25 118 228 320 8.40e-20 88.6
MS.gene95465.t1 MTR_7g037130 43.158 95 53 1 22 116 145 238 1.82e-19 87.0
MS.gene95465.t1 MTR_7g086960 44.898 98 51 2 22 118 89 184 2.76e-19 86.3
MS.gene95465.t1 MTR_4g063100 73.913 46 12 0 78 123 1 46 2.84e-19 83.2
MS.gene95465.t1 MTR_6g027370 37.607 117 63 3 8 123 92 199 4.23e-19 85.9
MS.gene95465.t1 MTR_2g096380 67.347 49 16 0 78 126 1 49 4.08e-18 79.7
MS.gene95465.t1 MTR_0023s0210 47.368 76 40 0 21 96 8 83 1.57e-17 75.5
MS.gene95465.t1 MTR_8g468380 38.532 109 66 1 25 133 25 132 7.82e-17 79.7
MS.gene95465.t1 MTR_5g038910 37.037 108 67 1 25 132 29 135 1.12e-15 76.3
MS.gene95465.t1 MTR_5g038910 37.037 108 67 1 25 132 29 135 1.14e-15 76.6
MS.gene95465.t1 MTR_6g055910 58.696 46 19 0 78 123 2 47 1.40e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene95465.t1 AT3G24310 54.475 257 106 5 17 264 15 269 8.44e-83 249
MS.gene95465.t1 AT4G13480 51.673 269 103 6 15 264 1 261 2.38e-79 240
MS.gene95465.t1 AT3G30210 51.802 222 82 6 21 239 28 227 2.04e-62 197
MS.gene95465.t1 AT3G27810 49.068 161 65 1 21 164 21 181 7.18e-52 169
MS.gene95465.t1 AT1G48000 70.476 105 31 0 21 125 33 137 1.15e-50 166
MS.gene95465.t1 AT5G40350 67.308 104 34 0 21 124 18 121 1.92e-50 165
MS.gene95465.t1 AT3G01530 60.526 114 45 0 16 129 21 134 2.52e-49 162
MS.gene95465.t1 AT5G59780 64.220 109 39 0 15 123 3 111 2.71e-49 162
MS.gene95465.t1 AT3G46130 64.545 110 39 0 14 123 3 112 3.85e-49 163
MS.gene95465.t1 AT1G68320 64.762 105 37 0 21 125 20 124 1.75e-48 162
MS.gene95465.t1 AT2G47190 61.261 111 43 0 16 126 16 126 1.18e-47 159
MS.gene95465.t1 AT2G16720 52.482 141 65 1 14 154 6 144 2.76e-47 158
MS.gene95465.t1 AT1G25340 62.857 105 39 0 21 125 19 123 3.68e-47 159
MS.gene95465.t1 AT1G22640 64.078 103 37 0 22 124 14 116 5.16e-46 155
MS.gene95465.t1 AT4G09460 40.404 198 102 3 22 219 14 195 9.31e-46 154
MS.gene95465.t1 AT1G35515 60.177 113 45 0 14 126 6 118 1.47e-45 152
MS.gene95465.t1 AT4G34990 62.162 111 42 0 14 124 6 116 1.50e-45 154
MS.gene95465.t1 AT5G26660 61.062 113 44 0 13 125 5 117 1.64e-45 156
MS.gene95465.t1 AT5G16770 58.716 109 45 0 16 124 8 116 2.78e-45 155
MS.gene95465.t1 AT5G16770 58.716 109 45 0 16 124 8 116 2.78e-45 155
MS.gene95465.t1 AT5G10280 57.658 111 47 0 14 124 6 116 3.06e-45 155
MS.gene95465.t1 AT5G16770 58.716 109 45 0 16 124 8 116 4.81e-45 154
MS.gene95465.t1 AT5G16770 58.716 109 45 0 16 124 8 116 4.81e-45 154
MS.gene95465.t1 AT3G53200 61.682 107 41 0 17 123 6 112 6.00e-45 151
MS.gene95465.t1 AT5G65230 59.633 109 44 0 16 124 8 116 6.17e-45 154
MS.gene95465.t1 AT4G38620 58.407 113 47 0 14 126 6 118 7.38e-45 152
MS.gene95465.t1 AT5G14750 57.944 107 45 0 18 124 14 120 7.54e-45 150
MS.gene95465.t1 AT5G49620 66.964 112 37 0 14 125 20 131 8.14e-45 153
MS.gene95465.t1 AT3G13540 62.500 104 39 0 21 124 24 127 8.57e-45 151
MS.gene95465.t1 AT4G21440 57.798 109 46 0 16 124 8 116 1.30e-44 154
MS.gene95465.t1 AT1G06180 58.716 109 45 0 21 129 13 121 1.66e-44 150
MS.gene95465.t1 AT1G18570 52.672 131 62 0 21 151 14 144 2.26e-44 153
MS.gene95465.t1 AT5G07700 46.528 144 75 1 21 164 13 154 2.33e-44 153
MS.gene95465.t1 AT5G07700 46.528 144 75 1 21 164 13 154 2.33e-44 153
MS.gene95465.t1 AT5G54230 61.538 104 40 0 21 124 13 116 2.40e-44 152
MS.gene95465.t1 AT5G07690 63.725 102 37 0 21 122 13 114 2.43e-44 153
MS.gene95465.t1 AT2G32460 58.772 114 47 0 10 123 8 121 2.65e-44 156
MS.gene95465.t1 AT3G02940 58.716 109 45 0 16 124 8 116 3.16e-44 152
MS.gene95465.t1 AT3G06490 67.619 105 34 0 21 125 20 124 3.49e-44 152
MS.gene95465.t1 AT3G01140 63.462 104 38 0 21 124 13 116 3.58e-44 152
MS.gene95465.t1 AT3G61250 59.615 104 42 0 21 124 13 116 3.65e-44 151
MS.gene95465.t1 AT5G15310 62.500 104 39 0 21 124 13 116 3.91e-44 150
MS.gene95465.t1 AT5G40330 55.963 109 48 0 16 124 8 116 4.90e-44 149
MS.gene95465.t1 AT5G61420 61.538 104 40 0 21 124 13 116 5.19e-44 152
MS.gene95465.t1 AT3G02940 58.716 109 45 0 16 124 8 116 5.32e-44 151
MS.gene95465.t1 AT3G02940 58.716 109 45 0 16 124 8 116 5.32e-44 151
MS.gene95465.t1 AT4G12350 62.500 104 39 0 21 124 13 116 6.18e-44 150
MS.gene95465.t1 AT3G47600 46.753 154 75 2 21 167 13 166 6.69e-44 151
MS.gene95465.t1 AT1G34670 58.716 109 45 0 16 124 8 116 6.76e-44 152
MS.gene95465.t1 AT3G01140 63.462 104 38 0 21 124 56 159 7.92e-44 152
MS.gene95465.t1 AT5G15310 62.500 104 39 0 21 124 13 116 9.07e-44 151
MS.gene95465.t1 AT4G28110 58.654 104 43 0 21 124 13 116 9.52e-44 150
MS.gene95465.t1 AT5G15310 62.500 104 39 0 21 124 13 116 1.21e-43 150
MS.gene95465.t1 AT3G11440 62.136 103 39 0 21 123 42 144 1.44e-43 154
MS.gene95465.t1 AT3G23250 41.243 177 92 1 21 197 13 177 1.56e-43 149
MS.gene95465.t1 AT1G57560 58.929 112 46 0 13 124 5 116 2.52e-43 148
MS.gene95465.t1 AT4G22680 61.538 104 40 0 21 124 13 116 2.72e-43 148
MS.gene95465.t1 AT1G57560 58.929 112 46 0 13 124 5 116 3.06e-43 149
MS.gene95465.t1 AT3G27920 53.782 119 55 0 16 134 10 128 3.38e-43 147
MS.gene95465.t1 AT2G32460 62.136 103 39 0 21 123 7 109 3.41e-43 153
MS.gene95465.t1 AT5G62470 46.939 147 78 0 21 167 13 159 3.76e-43 150
MS.gene95465.t1 AT5G16600 45.562 169 72 3 21 169 13 181 3.86e-43 149
MS.gene95465.t1 AT1G09540 59.292 113 46 0 13 125 5 117 4.35e-43 150
MS.gene95465.t1 AT4G05100 59.615 104 42 0 21 124 14 117 4.75e-43 149
MS.gene95465.t1 AT5G06100 62.136 103 39 0 21 123 33 135 6.43e-43 152
MS.gene95465.t1 AT1G66230 48.252 143 73 1 21 162 13 155 7.99e-43 147
MS.gene95465.t1 AT3G11440 62.136 103 39 0 21 123 42 144 8.42e-43 153
MS.gene95465.t1 AT3G11440 62.136 103 39 0 21 123 42 144 8.42e-43 153
MS.gene95465.t1 AT3G11440 62.136 103 39 0 21 123 42 144 8.42e-43 153
MS.gene95465.t1 AT1G25340 60.000 105 37 1 21 125 19 118 1.83e-42 146
MS.gene95465.t1 AT5G06100 62.136 103 39 0 21 123 33 135 1.88e-42 152
MS.gene95465.t1 AT5G06100 62.136 103 39 0 21 123 33 135 1.88e-42 152
MS.gene95465.t1 AT5G06100 62.136 103 39 0 21 123 33 135 1.88e-42 152
MS.gene95465.t1 AT5G06100 62.136 103 39 0 21 123 33 135 1.88e-42 152
MS.gene95465.t1 AT2G31180 59.615 104 42 0 21 124 13 116 2.22e-42 145
MS.gene95465.t1 AT4G01680 58.407 113 47 0 13 125 5 117 2.25e-42 145
MS.gene95465.t1 AT1G25340 60.000 105 37 1 21 125 19 118 3.88e-42 146
MS.gene95465.t1 AT4G17785 60.577 104 41 0 21 124 14 117 5.42e-42 147
MS.gene95465.t1 AT3G62610 59.615 104 42 0 21 124 13 116 5.45e-42 147
MS.gene95465.t1 AT4G01680 58.407 113 47 0 13 125 5 117 6.07e-42 146
MS.gene95465.t1 AT5G60890 57.273 110 47 0 16 125 8 117 6.57e-42 145
MS.gene95465.t1 AT4G17785 60.577 104 41 0 21 124 14 117 7.24e-42 147
MS.gene95465.t1 AT1G74080 62.745 102 38 0 21 122 13 114 8.23e-42 146
MS.gene95465.t1 AT5G49330 61.538 104 40 0 21 124 13 116 1.10e-41 146
MS.gene95465.t1 AT2G26960 62.136 103 39 0 20 122 20 122 1.17e-41 148
MS.gene95465.t1 AT3G13890 54.464 112 51 0 13 124 5 116 1.23e-41 146
MS.gene95465.t1 AT1G08810 53.279 122 56 1 21 142 13 133 1.34e-41 144
MS.gene95465.t1 AT5G62320 58.559 111 39 1 21 124 14 124 1.44e-41 143
MS.gene95465.t1 AT2G47460 58.491 106 44 0 21 126 13 118 2.54e-41 145
MS.gene95465.t1 AT5G49620 59.524 126 37 1 14 125 20 145 4.05e-41 144
MS.gene95465.t1 AT1G74650 60.577 104 41 0 21 124 13 116 4.06e-41 144
MS.gene95465.t1 AT5G62470 46.259 147 78 1 21 167 13 158 1.19e-40 144
MS.gene95465.t1 AT1G79180 53.509 114 53 0 21 134 15 128 1.24e-40 142
MS.gene95465.t1 AT1G56160 52.252 111 53 0 14 124 8 118 2.60e-40 141
MS.gene95465.t1 AT5G55020 58.095 105 44 0 21 125 27 131 3.03e-40 145
MS.gene95465.t1 AT5G52600 58.252 103 43 0 21 123 13 115 3.67e-40 138
MS.gene95465.t1 AT1G63910 53.913 115 53 0 13 127 5 119 3.81e-40 142
MS.gene95465.t1 AT5G12870 53.390 118 55 0 13 130 11 128 4.40e-40 140
MS.gene95465.t1 AT3G12720 54.808 104 47 0 21 124 23 126 5.61e-40 140
MS.gene95465.t1 AT3G08500 57.944 107 45 0 19 125 29 135 7.08e-40 141
MS.gene95465.t1 AT3G48920 57.407 108 46 0 17 124 15 122 7.52e-40 139
MS.gene95465.t1 AT1G74430 52.991 117 53 1 8 124 2 116 8.89e-40 139
MS.gene95465.t1 AT5G35550 37.037 216 117 5 22 227 16 222 1.24e-39 138
MS.gene95465.t1 AT1G16490 54.808 104 47 0 21 124 15 118 2.64e-39 138
MS.gene95465.t1 AT3G28910 57.692 104 44 0 21 124 13 116 2.73e-39 139
MS.gene95465.t1 AT4G26930 48.227 141 66 2 21 159 20 155 5.43e-39 140
MS.gene95465.t1 AT4G25560 57.547 106 45 0 18 123 8 113 7.30e-39 137
MS.gene95465.t1 AT4G01680 52.800 125 47 1 13 125 5 129 8.63e-39 139
MS.gene95465.t1 AT5G56110 56.881 109 47 0 16 124 8 116 8.82e-39 138
MS.gene95465.t1 AT3G13890 50.413 121 51 1 13 124 5 125 1.20e-38 139
MS.gene95465.t1 AT5G14340 58.491 106 44 0 21 126 25 130 1.23e-38 136
MS.gene95465.t1 AT3G12820 50.427 117 58 0 8 124 2 118 1.85e-38 135
MS.gene95465.t1 AT4G37780 44.218 147 74 2 21 166 13 152 1.91e-37 134
MS.gene95465.t1 AT5G52260 58.095 105 44 0 19 123 11 115 2.39e-37 133
MS.gene95465.t1 AT3G28470 58.163 98 41 0 21 118 13 110 1.21e-36 132
MS.gene95465.t1 AT5G23000 51.786 112 53 1 14 124 6 117 5.24e-36 130
MS.gene95465.t1 AT3G46130 76.389 72 17 0 52 123 9 80 1.39e-35 127
MS.gene95465.t1 AT5G59780 77.465 71 16 0 53 123 20 90 1.82e-35 126
MS.gene95465.t1 AT3G27810 47.692 130 49 2 53 164 4 132 2.44e-35 125
MS.gene95465.t1 AT5G65790 54.206 107 48 1 21 126 13 119 3.16e-35 130
MS.gene95465.t1 AT3G46130 77.465 71 16 0 53 123 20 90 3.52e-35 126
MS.gene95465.t1 AT3G49690 54.206 107 48 1 21 126 13 119 3.68e-35 128
MS.gene95465.t1 AT1G66370 54.369 103 47 0 21 123 9 111 4.43e-35 126
MS.gene95465.t1 AT5G57620 54.286 105 47 1 21 124 13 117 6.85e-35 128
MS.gene95465.t1 AT2G36890 43.448 145 80 2 21 164 13 156 9.55e-35 127
MS.gene95465.t1 AT1G18710 48.718 117 58 1 8 124 2 116 1.33e-34 125
MS.gene95465.t1 AT2G36890 54.286 105 47 1 21 124 54 158 2.11e-34 127
MS.gene95465.t1 AT1G79180 41.497 147 53 1 21 134 15 161 3.66e-34 126
MS.gene95465.t1 AT3G53200 73.239 71 19 0 53 123 9 79 5.83e-34 122
MS.gene95465.t1 AT5G40350 69.444 72 22 0 53 124 5 76 2.34e-33 119
MS.gene95465.t1 AT1G66380 55.340 103 46 0 21 123 9 111 4.17e-32 115
MS.gene95465.t1 AT1G56650 55.340 103 46 0 21 123 9 111 4.68e-32 118
MS.gene95465.t1 AT2G26950 40.559 143 84 1 20 161 16 158 9.65e-32 120
MS.gene95465.t1 AT3G60460 50.485 103 50 1 21 122 12 114 1.72e-31 118
MS.gene95465.t1 AT5G26660 69.863 73 22 0 53 125 14 86 1.98e-31 119
MS.gene95465.t1 AT1G66390 55.340 103 46 0 21 123 9 111 2.02e-31 117
MS.gene95465.t1 AT3G47600 45.902 122 59 2 53 167 39 160 3.47e-29 112
MS.gene95465.t1 AT5G58850 34.008 247 140 8 22 260 105 336 1.95e-28 112
MS.gene95465.t1 AT4G37260 41.985 131 71 3 22 149 13 141 2.62e-28 110
MS.gene95465.t1 AT2G23290 48.696 115 55 3 10 123 2 113 3.13e-28 110
MS.gene95465.t1 AT5G14750 62.319 69 26 0 56 124 18 86 1.32e-27 104
MS.gene95465.t1 AT5G35550 34.737 190 105 5 48 227 45 225 2.27e-27 106
MS.gene95465.t1 AT3G12820 63.768 69 25 0 56 124 2 70 2.31e-27 104
MS.gene95465.t1 AT3G09230 46.552 116 55 3 22 136 55 164 3.45e-27 108
MS.gene95465.t1 AT3G27785 53.125 96 42 2 22 116 189 282 6.71e-27 108
MS.gene95465.t1 AT5G02320 48.077 104 51 2 22 124 127 228 1.29e-26 108
MS.gene95465.t1 AT5G02320 37.037 108 66 2 19 125 72 178 6.38e-14 71.6
MS.gene95465.t1 AT5G02320 48.077 104 51 2 22 124 127 228 1.29e-26 108
MS.gene95465.t1 AT5G02320 37.037 108 66 2 19 125 72 178 6.38e-14 71.6
MS.gene95465.t1 AT5G02320 48.077 104 51 2 22 124 67 168 1.46e-26 108
MS.gene95465.t1 AT5G02320 37.037 108 66 2 19 125 12 118 8.39e-14 71.2
MS.gene95465.t1 AT2G39880 49.515 103 49 2 22 123 50 150 2.20e-26 106
MS.gene95465.t1 AT5G11510 34.868 152 90 3 22 172 81 224 7.79e-26 106
MS.gene95465.t1 AT5G11510 34.579 107 68 2 19 124 26 131 9.13e-13 68.2
MS.gene95465.t1 AT5G11510 34.868 152 90 3 22 172 81 224 8.66e-26 106
MS.gene95465.t1 AT5G11510 34.579 107 68 2 19 124 26 131 9.30e-13 68.2
MS.gene95465.t1 AT5G11050 51.042 96 44 2 22 116 105 198 8.94e-26 105
MS.gene95465.t1 AT5G11510 34.868 152 90 3 22 172 81 224 8.95e-26 106
MS.gene95465.t1 AT5G11510 34.579 107 68 2 19 124 26 131 1.00e-12 68.2
MS.gene95465.t1 AT5G11510 34.868 152 90 3 22 172 81 224 8.95e-26 106
MS.gene95465.t1 AT5G11510 34.579 107 68 2 19 124 26 131 1.00e-12 68.2
MS.gene95465.t1 AT5G11510 34.868 152 90 3 22 172 81 224 8.95e-26 106
MS.gene95465.t1 AT5G11510 34.579 107 68 2 19 124 26 131 1.00e-12 68.2
MS.gene95465.t1 AT3G09370 47.573 103 51 2 22 123 135 235 1.34e-25 105
MS.gene95465.t1 AT3G09370 36.449 107 66 2 19 124 80 185 4.38e-12 66.2
MS.gene95465.t1 AT3G09370 47.573 103 51 2 22 123 130 230 1.56e-25 105
MS.gene95465.t1 AT3G09370 36.449 107 66 2 19 124 75 180 5.55e-12 65.9
MS.gene95465.t1 AT3G09370 47.573 103 51 2 22 123 143 243 1.81e-25 105
MS.gene95465.t1 AT3G09370 36.449 107 66 2 19 124 88 193 4.37e-12 66.2
MS.gene95465.t1 AT4G18770 42.735 117 60 3 12 123 207 321 1.90e-25 104
MS.gene95465.t1 AT3G55730 45.631 103 53 2 22 123 56 156 2.44e-25 103
MS.gene95465.t1 AT3G50060 44.660 103 54 2 22 123 6 106 1.14e-24 100
MS.gene95465.t1 AT4G32730 44.231 104 55 2 22 124 87 188 3.93e-24 101
MS.gene95465.t1 AT4G32730 31.148 122 82 2 4 124 17 137 5.09e-13 68.9
MS.gene95465.t1 AT5G67300 45.631 103 53 2 22 123 6 106 4.08e-24 99.0
MS.gene95465.t1 AT4G32730 44.231 104 55 2 22 124 87 188 4.25e-24 101
MS.gene95465.t1 AT4G32730 31.148 122 82 2 4 124 17 137 6.22e-13 68.9
MS.gene95465.t1 AT4G32730 44.231 104 55 2 22 124 87 188 4.25e-24 101
MS.gene95465.t1 AT4G32730 31.148 122 82 2 4 124 17 137 6.22e-13 68.9
MS.gene95465.t1 AT4G32730 44.231 104 55 2 22 124 87 188 4.25e-24 101
MS.gene95465.t1 AT4G32730 31.148 122 82 2 4 124 17 137 6.22e-13 68.9
MS.gene95465.t1 AT4G32730 44.231 104 55 2 22 124 87 188 4.25e-24 101
MS.gene95465.t1 AT4G32730 31.148 122 82 2 4 124 17 137 6.22e-13 68.9
MS.gene95465.t1 AT1G17950 48.958 96 46 2 22 116 5 98 7.80e-24 97.1
MS.gene95465.t1 AT5G40360 45.263 95 51 1 22 116 158 251 3.86e-23 97.1
MS.gene95465.t1 AT1G69560 40.000 115 66 2 22 135 107 219 1.27e-22 95.1
MS.gene95465.t1 AT1G69560 40.000 115 66 2 22 135 123 235 1.40e-22 95.5
MS.gene95465.t1 AT1G26780 40.870 115 65 2 22 135 98 210 2.41e-22 93.6
MS.gene95465.t1 AT1G26780 40.870 115 65 2 22 135 98 210 4.20e-22 94.4
MS.gene95465.t1 AT3G23250 37.879 132 70 1 66 197 1 120 4.46e-22 91.7
MS.gene95465.t1 AT1G73410 46.939 98 49 2 22 118 6 101 6.13e-22 91.7
MS.gene95465.t1 AT1G73410 46.939 98 49 2 22 118 6 101 7.99e-22 90.5
MS.gene95465.t1 AT4G33450 41.803 122 67 3 22 141 19 138 8.16e-22 91.7
MS.gene95465.t1 AT5G17800 43.269 104 58 1 22 125 93 195 9.70e-22 92.8
MS.gene95465.t1 AT1G22640 62.712 59 22 0 66 124 1 59 1.01e-21 90.1
MS.gene95465.t1 AT1G66380 54.545 77 35 0 47 123 2 78 9.88e-21 84.7
MS.gene95465.t1 AT5G14750 57.627 59 25 0 66 124 1 59 2.12e-20 85.1
MS.gene95465.t1 AT5G14750 57.627 59 25 0 66 124 1 59 2.12e-20 85.1
MS.gene95465.t1 AT3G29020 39.091 110 64 2 22 130 65 172 2.84e-20 87.0
MS.gene95465.t1 AT5G59780 78.261 46 10 0 78 123 1 46 3.24e-20 85.5
MS.gene95465.t1 AT3G46130 78.261 46 10 0 78 123 1 46 7.07e-20 85.1
MS.gene95465.t1 AT3G29020 39.091 110 64 2 22 130 67 174 8.66e-20 87.0
MS.gene95465.t1 AT2G37630 42.574 101 55 2 25 123 7 106 1.20e-19 87.4
MS.gene95465.t1 AT1G71030 46.914 81 42 1 44 124 5 84 4.42e-19 83.2
MS.gene95465.t1 AT1G71030 53.030 66 31 0 59 124 5 70 5.14e-19 82.4
MS.gene95465.t1 AT4G00540 44.444 108 54 3 22 125 103 208 6.10e-19 85.9
MS.gene95465.t1 AT4G00540 44.444 108 54 3 22 125 101 206 1.00e-18 85.5
MS.gene95465.t1 AT2G25230 40.777 103 57 3 25 126 29 128 2.29e-18 82.0
MS.gene95465.t1 AT1G66380 48.750 80 41 0 21 100 9 88 2.35e-18 78.6
MS.gene95465.t1 AT1G18960 38.679 106 56 3 22 124 10 109 8.22e-18 81.6
MS.gene95465.t1 AT1G14350 36.275 102 64 1 25 126 28 128 3.63e-15 75.1
MS.gene95465.t1 AT1G14350 36.275 102 64 1 25 126 28 128 3.63e-15 75.1
MS.gene95465.t1 AT2G02820 34.259 108 70 1 25 132 33 139 6.53e-15 73.9
MS.gene95465.t1 AT2G02820 36.036 111 64 2 25 132 33 139 8.50e-15 73.9
MS.gene95465.t1 AT2G02820 36.036 111 64 2 25 132 33 139 1.01e-14 73.9
MS.gene95465.t1 AT5G39700 37.037 108 67 1 21 128 55 161 1.05e-14 70.9
MS.gene95465.t1 AT5G40430 35.156 128 77 5 2 128 35 157 3.58e-14 70.9
MS.gene95465.t1 AT4G25560 63.043 46 17 0 78 123 2 47 4.74e-14 69.7
MS.gene95465.t1 AT5G61420 72.222 36 10 0 89 124 2 37 1.29e-11 63.9
MS.gene95465.t1 AT3G18100 30.769 130 80 3 2 124 473 599 1.62e-11 64.7
MS.gene95465.t1 AT3G18100 30.769 130 80 3 2 124 360 486 1.63e-11 64.7
MS.gene95465.t1 AT3G18100 30.769 130 80 3 2 124 308 434 1.79e-11 64.3
MS.gene95465.t1 AT3G18100 30.769 130 80 3 2 124 521 647 1.85e-11 64.3

Find 56 sgRNAs with CRISPR-Local

Find 71 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTCTTTCATTATGTATTC+AGG 0.237061 1.3:-52597305 None:intergenic
CCTTCTTAAGGTCTGGTCTT+AGG 0.259563 1.3:+52596954 None:intergenic
AACTCTGTCTCTAGGCTTGC+AGG 0.297134 1.3:-52597158 MS.gene95465:intron
GTGTTATCTGACCCTTCTTA+AGG 0.320325 1.3:+52596942 None:intergenic
ATCTCATTGTCAGTTCTTCC+CGG 0.346112 1.3:+52596717 None:intergenic
TTTGCAGGACTGAGAAGAAA+TGG 0.356634 1.3:-52597007 MS.gene95465:intron
TGCTGATACACAAGTACAAC+AGG 0.369003 1.3:-52596436 MS.gene95465:CDS
GTGTAATGGAAGAAGATAGA+TGG 0.371974 1.3:-52597256 MS.gene95465:CDS
ATCTGACCCTTCTTAAGGTC+TGG 0.379207 1.3:+52596947 None:intergenic
AACAATTGCGAGAAGCTTGC+CGG 0.379879 1.3:-52596736 MS.gene95465:CDS
CCCCTCTGATGCTGCTGAAA+AGG 0.386654 1.3:-52596652 MS.gene95465:CDS
AGAATTTGTGGGATGGACTT+TGG 0.395443 1.3:-52596347 MS.gene95465:CDS
TGGAACTTGGATGATGCTCT+TGG 0.418349 1.3:-52596327 MS.gene95465:CDS
ACAATGAGATAAAGAACTAT+TGG 0.425896 1.3:-52596704 MS.gene95465:CDS
TACATGCTAGGTGGGGAAAC+AGG 0.437338 1.3:-52596892 MS.gene95465:intron
TTCTCAAGAGACACAAGAAA+TGG 0.446329 1.3:-52596469 MS.gene95465:CDS
TTGCAGGACTGAGAAGAAAT+GGG 0.458286 1.3:-52597006 MS.gene95465:intron
CTTCAAATGAAGAGAATTTG+TGG 0.464547 1.3:-52596359 MS.gene95465:CDS
CATTATGTATTCAGGAATGA+TGG 0.464772 1.3:-52597297 None:intergenic
GTGGGATGGACTTTGGAACT+TGG 0.492651 1.3:-52596340 MS.gene95465:CDS
ACTACACTGTGCACATTGGC+TGG 0.492744 1.3:+52596273 None:intergenic
TGTGTCTCTTGAGAAGTAGA+AGG 0.496024 1.3:+52596477 None:intergenic
CCTAGAGCTACATGCTAGGT+GGG 0.498599 1.3:-52596900 MS.gene95465:CDS
ACAATTGCGAGAAGCTTGCC+GGG 0.500170 1.3:-52596735 MS.gene95465:CDS
AATACAACATGGACATGAAA+GGG 0.511886 1.3:-52596545 MS.gene95465:CDS
ATGAGATAAAGAACTATTGG+AGG 0.513857 1.3:-52596701 MS.gene95465:CDS
TTCAAATGAAGAGAATTTGT+GGG 0.514100 1.3:-52596358 MS.gene95465:CDS
TACTTGTGTATCAGCATACA+TGG 0.517091 1.3:+52596443 None:intergenic
AGCAGCATGGTGAAGGCAGA+TGG 0.518000 1.3:-52597181 MS.gene95465:CDS
CCCACCTAGCATGTAGCTCT+AGG 0.519377 1.3:+52596900 None:intergenic
CAATACAACATGGACATGAA+AGG 0.522848 1.3:-52596546 MS.gene95465:CDS
CCTAAGACCAGACCTTAAGA+AGG 0.523078 1.3:-52596954 MS.gene95465:CDS
TCTATGCTCAATGATAATAG+TGG 0.536144 1.3:-52596402 MS.gene95465:CDS
GGAAAAGTTGTAGATTGAGA+TGG 0.549086 1.3:-52596985 MS.gene95465:CDS
TATGTCAAGCAGCATGGTGA+AGG 0.550639 1.3:-52597188 MS.gene95465:CDS
GCAGATGGAACTCTGTCTCT+AGG 0.556467 1.3:-52597166 MS.gene95465:CDS
GAAAAGTTGTAGATTGAGAT+GGG 0.559168 1.3:-52596984 MS.gene95465:CDS
ATAGATGGAGGAAAGGACCT+TGG 0.564310 1.3:-52597241 MS.gene95465:CDS
GAAGAAGATAGATGGAGGAA+AGG 0.569212 1.3:-52597248 MS.gene95465:CDS
GGAATGATGGAAGGAAACAC+TGG 0.575742 1.3:-52597284 MS.gene95465:CDS
AATGAAGAGAATTTGTGGGA+TGG 0.584872 1.3:-52596354 MS.gene95465:CDS
AAACACTGGATGGAGTGTAA+TGG 0.585481 1.3:-52597270 MS.gene95465:CDS
GAAAGGACCTTGGACTTCTG+AGG 0.594052 1.3:-52597231 MS.gene95465:CDS
GATCATAGACTTGTTGCTTG+AGG 0.595685 1.3:-52596523 MS.gene95465:CDS
TAATGGAAGAAGATAGATGG+AGG 0.601607 1.3:-52597253 MS.gene95465:CDS
TTGTCTTCCTCAGAAGTCCA+AGG 0.607855 1.3:+52597224 None:intergenic
ATGTATTCAGGAATGATGGA+AGG 0.614007 1.3:-52597293 MS.gene95465:CDS
TGATGGAAGGAAACACTGGA+TGG 0.616620 1.3:-52597280 MS.gene95465:CDS
ATTGAGTATGTCAAGCAGCA+TGG 0.618335 1.3:-52597194 MS.gene95465:CDS
TCCTAGAGCTACATGCTAGG+TGG 0.619467 1.3:-52596901 MS.gene95465:CDS
TAATCCTAGAGCTACATGCT+AGG 0.625705 1.3:-52596904 MS.gene95465:CDS
CTAAGACCAGACCTTAAGAA+GGG 0.632926 1.3:-52596953 MS.gene95465:CDS
AGTAACTACACTGTGCACAT+TGG 0.634025 1.3:+52596269 None:intergenic
CTAGAGCTACATGCTAGGTG+GGG 0.652296 1.3:-52596899 MS.gene95465:CDS
ACAACAACTACAATACAACA+TGG 0.686703 1.3:-52596556 MS.gene95465:CDS
GCTGATACACAAGTACAACA+GGG 0.770070 1.3:-52596435 MS.gene95465:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAATATATGATCAATA+AGG + chr1.3:52596525-52596544 None:intergenic 10.0%
!! AATTGGTATTAATTAAACTA+AGG + chr1.3:52596490-52596509 None:intergenic 15.0%
!! TACTAAATAAAAAACATTTC+AGG - chr1.3:52596786-52596805 MS.gene95465:intron 15.0%
!! CAAAAAATGTGTATAAAGTT+TGG + chr1.3:52596438-52596457 None:intergenic 20.0%
!! TAAATAAAAAACATTTCAGG+TGG - chr1.3:52596789-52596808 MS.gene95465:intron 20.0%
!!! TGATCATATATTATTTTTGC+AGG - chr1.3:52596528-52596547 MS.gene95465:CDS 20.0%
! ACAATGAGATAAAGAACTAT+TGG - chr1.3:52596846-52596865 MS.gene95465:intron 25.0%
! TAAGGAGTTAAGAATTCAAT+TGG + chr1.3:52596507-52596526 None:intergenic 25.0%
! TTCAAATGAAGAGAATTTGT+GGG - chr1.3:52597192-52597211 MS.gene95465:CDS 25.0%
AATACAACATGGACATGAAA+GGG - chr1.3:52597005-52597024 MS.gene95465:intron 30.0%
ACAACAACTACAATACAACA+TGG - chr1.3:52596994-52597013 MS.gene95465:CDS 30.0%
ATGAGATAAAGAACTATTGG+AGG - chr1.3:52596849-52596868 MS.gene95465:intron 30.0%
CTTCAAATGAAGAGAATTTG+TGG - chr1.3:52597191-52597210 MS.gene95465:CDS 30.0%
GAAAAGTTGTAGATTGAGAT+GGG - chr1.3:52596566-52596585 MS.gene95465:CDS 30.0%
TCTATGCTCAATGATAATAG+TGG - chr1.3:52597148-52597167 MS.gene95465:intron 30.0%
! AAGGTACAAAGTACTATGTT+AGG + chr1.3:52596471-52596490 None:intergenic 30.0%
! CTTGATAAAGTGTCTAATAC+TGG + chr1.3:52596721-52596740 None:intergenic 30.0%
AATGAAGAGAATTTGTGGGA+TGG - chr1.3:52597196-52597215 MS.gene95465:CDS 35.0%
CAATACAACATGGACATGAA+AGG - chr1.3:52597004-52597023 MS.gene95465:intron 35.0%
GGAAAAGTTGTAGATTGAGA+TGG - chr1.3:52596565-52596584 MS.gene95465:CDS 35.0%
TAATGGAAGAAGATAGATGG+AGG - chr1.3:52596297-52596316 MS.gene95465:CDS 35.0%
TACTTGTGTATCAGCATACA+TGG + chr1.3:52597110-52597129 None:intergenic 35.0%
TTCTCAAGAGACACAAGAAA+TGG - chr1.3:52597081-52597100 MS.gene95465:intron 35.0%
! ATGTATTCAGGAATGATGGA+AGG - chr1.3:52596257-52596276 MS.gene95465:CDS 35.0%
! GTGTAATGGAAGAAGATAGA+TGG - chr1.3:52596294-52596313 MS.gene95465:CDS 35.0%
AAACACTGGATGGAGTGTAA+TGG - chr1.3:52596280-52596299 MS.gene95465:CDS 40.0%
AGTAACTACACTGTGCACAT+TGG + chr1.3:52597284-52597303 None:intergenic 40.0%
ATCTCATTGTCAGTTCTTCC+CGG + chr1.3:52596836-52596855 None:intergenic 40.0%
ATTGAGTATGTCAAGCAGCA+TGG - chr1.3:52596356-52596375 MS.gene95465:CDS 40.0%
CTAAGACCAGACCTTAAGAA+GGG - chr1.3:52596597-52596616 MS.gene95465:CDS 40.0%
CTGGAAACGCGTAATTTCAA+CGG + chr1.3:52596702-52596721 None:intergenic 40.0%
GAAGAAGATAGATGGAGGAA+AGG - chr1.3:52596302-52596321 MS.gene95465:CDS 40.0%
GCTGATACACAAGTACAACA+GGG - chr1.3:52597115-52597134 MS.gene95465:intron 40.0%
GTGTTATCTGACCCTTCTTA+AGG + chr1.3:52596611-52596630 None:intergenic 40.0%
TAATCCTAGAGCTACATGCT+AGG - chr1.3:52596646-52596665 MS.gene95465:CDS 40.0%
TGCTGATACACAAGTACAAC+AGG - chr1.3:52597114-52597133 MS.gene95465:intron 40.0%
TGTGTCTCTTGAGAAGTAGA+AGG + chr1.3:52597076-52597095 None:intergenic 40.0%
TTGCAGGACTGAGAAGAAAT+GGG - chr1.3:52596544-52596563 MS.gene95465:CDS 40.0%
TTTGCAGGACTGAGAAGAAA+TGG - chr1.3:52596543-52596562 MS.gene95465:CDS 40.0%
! AGAATTTGTGGGATGGACTT+TGG - chr1.3:52597203-52597222 MS.gene95465:CDS 40.0%
!! GATCATAGACTTGTTGCTTG+AGG - chr1.3:52597027-52597046 MS.gene95465:intron 40.0%
AACAATTGCGAGAAGCTTGC+CGG - chr1.3:52596814-52596833 MS.gene95465:intron 45.0%
ATAGATGGAGGAAAGGACCT+TGG - chr1.3:52596309-52596328 MS.gene95465:CDS 45.0%
ATCTGACCCTTCTTAAGGTC+TGG + chr1.3:52596606-52596625 None:intergenic 45.0%
CCTAAGACCAGACCTTAAGA+AGG - chr1.3:52596596-52596615 MS.gene95465:CDS 45.0%
TATGTCAAGCAGCATGGTGA+AGG - chr1.3:52596362-52596381 MS.gene95465:CDS 45.0%
TGATGGAAGGAAACACTGGA+TGG - chr1.3:52596270-52596289 MS.gene95465:CDS 45.0%
TGGAACTTGGATGATGCTCT+TGG - chr1.3:52597223-52597242 MS.gene95465:CDS 45.0%
TTGTCTTCCTCAGAAGTCCA+AGG + chr1.3:52596329-52596348 None:intergenic 45.0%
! CCTTCTTAAGGTCTGGTCTT+AGG + chr1.3:52596599-52596618 None:intergenic 45.0%
! GGAATGATGGAAGGAAACAC+TGG - chr1.3:52596266-52596285 MS.gene95465:CDS 45.0%
AACTCTGTCTCTAGGCTTGC+AGG - chr1.3:52596392-52596411 MS.gene95465:CDS 50.0%
ACAATTGCGAGAAGCTTGCC+GGG - chr1.3:52596815-52596834 MS.gene95465:intron 50.0%
ACTACACTGTGCACATTGGC+TGG + chr1.3:52597280-52597299 None:intergenic 50.0%
CCTAGAGCTACATGCTAGGT+GGG - chr1.3:52596650-52596669 MS.gene95465:CDS 50.0%
CTAGAGCTACATGCTAGGTG+GGG - chr1.3:52596651-52596670 MS.gene95465:CDS 50.0%
GAAAGGACCTTGGACTTCTG+AGG - chr1.3:52596319-52596338 MS.gene95465:CDS 50.0%
GCAGATGGAACTCTGTCTCT+AGG - chr1.3:52596384-52596403 MS.gene95465:CDS 50.0%
TACATGCTAGGTGGGGAAAC+AGG - chr1.3:52596658-52596677 MS.gene95465:CDS 50.0%
TCCTAGAGCTACATGCTAGG+TGG - chr1.3:52596649-52596668 MS.gene95465:CDS 50.0%
! CCTTTTCAGCAGCATCAGAG+GGG + chr1.3:52596901-52596920 None:intergenic 50.0%
! GCCTTTTCAGCAGCATCAGA+GGG + chr1.3:52596902-52596921 None:intergenic 50.0%
!! GTGGGATGGACTTTGGAACT+TGG - chr1.3:52597210-52597229 MS.gene95465:CDS 50.0%
ACCCGAGTTGCGTTGTGACA+CGG - chr1.3:52596741-52596760 MS.gene95465:CDS 55.0%
ACCCGTGTCACAACGCAACT+CGG + chr1.3:52596746-52596765 None:intergenic 55.0%
AGCAGCATGGTGAAGGCAGA+TGG - chr1.3:52596369-52596388 MS.gene95465:CDS 55.0%
CCCACCTAGCATGTAGCTCT+AGG + chr1.3:52596653-52596672 None:intergenic 55.0%
CCCCTCTGATGCTGCTGAAA+AGG - chr1.3:52596898-52596917 MS.gene95465:CDS 55.0%
! CGCCTTTTCAGCAGCATCAG+AGG + chr1.3:52596903-52596922 None:intergenic 55.0%
CCCGAGTTGCGTTGTGACAC+GGG - chr1.3:52596742-52596761 MS.gene95465:CDS 60.0%
CCCGTGTCACAACGCAACTC+GGG + chr1.3:52596745-52596764 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 52596257 52597315 52596257 ID=MS.gene95465
chr1.3 mRNA 52596257 52597315 52596257 ID=MS.gene95465.t1;Parent=MS.gene95465
chr1.3 exon 52597159 52597315 52597159 ID=MS.gene95465.t1.exon1;Parent=MS.gene95465.t1
chr1.3 CDS 52597159 52597315 52597159 ID=cds.MS.gene95465.t1;Parent=MS.gene95465.t1
chr1.3 exon 52596893 52597022 52596893 ID=MS.gene95465.t1.exon2;Parent=MS.gene95465.t1
chr1.3 CDS 52596893 52597022 52596893 ID=cds.MS.gene95465.t1;Parent=MS.gene95465.t1
chr1.3 exon 52596257 52596764 52596257 ID=MS.gene95465.t1.exon3;Parent=MS.gene95465.t1
chr1.3 CDS 52596257 52596764 52596257 ID=cds.MS.gene95465.t1;Parent=MS.gene95465.t1
Gene Sequence

>MS.gene95465

ATGTATTCAGGAATGATGGAAGGAAACACTGGATGGAGTGTAATGGAAGAAGATAGATGGAGGAAAGGACCTTGGACTTCTGAGGAAGACAAATTACTCATTGAGTATGTCAAGCAGCATGGTGAAGGCAGATGGAACTCTGTCTCTAGGCTTGCAGGTACATACATACATGATACAACCAAACTTTATACACATTTTTTGTATTTTAATTCCTAACATAGTACTTTGTACCTTAGTTTAATTAATACCAATTGAATTCTTAACTCCTTATTGATCATATATTATTTTTGCAGGACTGAGAAGAAATGGGAAAAGTTGTAGATTGAGATGGGTGAACTACCTAAGACCAGACCTTAAGAAGGGTCAGATAACACAACAAGAAGAAAGCATAATCCTAGAGCTACATGCTAGGTGGGGAAACAGGTACAAATTTGAACTATGTCCGTTGAAATTACGCGTTTCCAGTATTAGACACTTTATCAAGACCCGAGTTGCGTTGTGACACGGGTTAATGCTTCTAGTTGATTATTACTAAATAAAAAACATTTCAGGTGGTCAACAATTGCGAGAAGCTTGCCGGGAAGAACTGACAATGAGATAAAGAACTATTGGAGGACTCATTTCAAGAAAAAGATCAAAAACCCCTCTGATGCTGCTGAAAAGGCGAAAAATCGTTCTTTCAAGACGCAGCAACAACAACAATTGAAGAAACAACAGCAACAAGTTCAGATGCAGCAACAACAACTACAATACAACATGGACATGAAAGGGATCATAGACTTGTTGCTTGAGGAAAATGACTACTGTACTAGTGTGCCTTCTACTTCTCAAGAGACACAAGAAATGGTTTCCATGTATGCTGATACACAAGTACAACAGGGTTGCTTTTATTCTATGCTCAATGATAATAGTGGTAATGTCTATGCACAAGAGTCTTCAAATGAAGAGAATTTGTGGGATGGACTTTGGAACTTGGATGATGCTCTTGGAAATTCAATGCAGCTAATGCTACAAGCAAAGCCAGCCAATGTGCACAGTGTAGTTACTCCCTTTTGTTAA
Protein sequence

>MS.gene95465.t1

MYSGMMEGNTGWSVMEEDRWRKGPWTSEEDKLLIEYVKQHGEGRWNSVSRLAGLRRNGKSCRLRWVNYLRPDLKKGQITQQEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKIKNPSDAAEKAKNRSFKTQQQQQLKKQQQQVQMQQQQLQYNMDMKGIIDLLLEENDYCTSVPSTSQETQEMVSMYADTQVQQGCFYSMLNDNSGNVYAQESSNEENLWDGLWNLDDALGNSMQLMLQAKPANVHSVVTPFC