Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95664.t1 | XP_003623338.1 | 78.4 | 458 | 26 | 3 | 26 | 414 | 78 | 531 | 3.50E-189 | 671 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95664.t1 | Q3EDH0 | 22.1 | 358 | 230 | 12 | 50 | 376 | 260 | 599 | 9.9e-07 | 56.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95664.t1 | G7KSD5 | 78.4 | 458 | 26 | 3 | 26 | 414 | 78 | 531 | 2.5e-189 | 671.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene95664.t1 | TF | GRAS |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95664.t1 | MTR_7g069740 | 68.542 | 480 | 84 | 5 | 1 | 414 | 53 | 531 | 0.0 | 619 |
| MS.gene95664.t1 | MTR_3g072710 | 24.419 | 344 | 203 | 14 | 80 | 391 | 103 | 421 | 1.81e-12 | 69.3 |
| MS.gene95664.t1 | MTR_5g058860 | 24.927 | 341 | 212 | 14 | 77 | 390 | 94 | 417 | 1.21e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 63 sgRNAs with CRISPR-Local
Find 110 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATTGACATAATTGATTAT+TGG | 0.190898 | 7.4:-33948349 | MS.gene95664:CDS |
| ACCAATTTGTGGACTCAAAA+TGG | 0.208342 | 7.4:+33948937 | None:intergenic |
| TGAAATTGACATCAATTAAA+TGG | 0.209268 | 7.4:-33948265 | MS.gene95664:CDS |
| TTTCTTCATCAATTGGAAAT+TGG | 0.210829 | 7.4:+33949002 | None:intergenic |
| TACTTTGCCACAAGAAAATA+TGG | 0.244532 | 7.4:-33948693 | MS.gene95664:intron |
| AACTCCCTTCACTTTCTTCT+TGG | 0.260798 | 7.4:+33948894 | None:intergenic |
| ATTGCAACAAAGCTTTATAA+TGG | 0.275966 | 7.4:+33947874 | None:intergenic |
| ATCAAGGGAATTATTACTTT+TGG | 0.281766 | 7.4:-33947966 | MS.gene95664:CDS |
| GACATAATTGATTATTGGTT+TGG | 0.287363 | 7.4:-33948344 | MS.gene95664:CDS |
| CTTGTATATCTTCTCTTGAT+TGG | 0.318337 | 7.4:-33947782 | MS.gene95664:CDS |
| GATATGATCATTGGTGAATA+TGG | 0.332452 | 7.4:+33949024 | None:intergenic |
| TCCAAGGTTTCTTCATCAAT+TGG | 0.335882 | 7.4:+33948995 | None:intergenic |
| AATGATAGGTCTTCCACATA+TGG | 0.349065 | 7.4:-33948063 | MS.gene95664:CDS |
| CTTGGAACTTCCATCTCTAA+TGG | 0.352756 | 7.4:-33948978 | MS.gene95664:CDS |
| ATGAAAATTCTGAATGTGTT+TGG | 0.359147 | 7.4:-33948238 | MS.gene95664:CDS |
| GAACATAGTCATCATCAATA+TGG | 0.362230 | 7.4:+33949140 | None:intergenic |
| TCTTGTATGCCTCGCCTTTG+AGG | 0.374060 | 7.4:+33948483 | None:intergenic |
| TTGGCTTTCAATTTAATGAT+AGG | 0.377944 | 7.4:-33948077 | MS.gene95664:CDS |
| AGTGAGTCTTCCACACTTGA+TGG | 0.390562 | 7.4:-33948657 | MS.gene95664:CDS |
| GAAATTGAAGGTAGAGGAAA+AGG | 0.406350 | 7.4:-33948162 | MS.gene95664:CDS |
| TCTTGAATATTACCAATTTG+TGG | 0.407532 | 7.4:+33948926 | None:intergenic |
| CTCTTGATTGGTTACAAACA+TGG | 0.411194 | 7.4:-33947770 | MS.gene95664:CDS |
| GAAGGTAGAGGAAAAGGAAT+TGG | 0.435590 | 7.4:-33948156 | MS.gene95664:CDS |
| ATTGATTATTGGTTTGGAAA+TGG | 0.443553 | 7.4:-33948338 | MS.gene95664:CDS |
| TCCAATTGATGAAGAAACCT+TGG | 0.445970 | 7.4:-33948996 | MS.gene95664:CDS |
| GAGGATTTGATCAAGAACTA+TGG | 0.447617 | 7.4:-33947990 | MS.gene95664:CDS |
| TGGAAATTGGATATGATCAT+TGG | 0.449728 | 7.4:+33949015 | None:intergenic |
| GATCAAGAACTATGGTATCA+AGG | 0.453234 | 7.4:-33947982 | MS.gene95664:CDS |
| AGTGATGGCTATCATCATAA+AGG | 0.457503 | 7.4:-33947735 | MS.gene95664:CDS |
| ATCAAAATAATGAACGAAAC+GGG | 0.464863 | 7.4:-33948116 | MS.gene95664:CDS |
| GTCTCAAGAGAGTCACCAAT+TGG | 0.467270 | 7.4:+33948551 | None:intergenic |
| GAAACAGCCTCCAAGAGAAA+AGG | 0.477495 | 7.4:+33948305 | None:intergenic |
| TGCATGTGAAGTGTTGTTTG+TGG | 0.478913 | 7.4:-33947808 | MS.gene95664:CDS |
| ATGATAGGTCTTCCACATAT+GGG | 0.481369 | 7.4:-33948062 | MS.gene95664:CDS |
| GCTCAAGAAGTGACAAATCA+TGG | 0.497130 | 7.4:-33948512 | MS.gene95664:CDS |
| GATCAAAATAATGAACGAAA+CGG | 0.497362 | 7.4:-33948117 | MS.gene95664:CDS |
| CTTCTAACCATTCCCATATG+TGG | 0.507260 | 7.4:+33948050 | None:intergenic |
| ATACTCATAAAGTTCCCTTC+TGG | 0.507348 | 7.4:+33948202 | None:intergenic |
| TCATCCATGATGATGCCATA+TGG | 0.509020 | 7.4:+33949118 | None:intergenic |
| CATTAGAGATGGAAGTTCCA+AGG | 0.509956 | 7.4:+33948979 | None:intergenic |
| ATCATGTGGTTTGAAATTGA+AGG | 0.512511 | 7.4:-33948174 | MS.gene95664:CDS |
| GATGATGACTATGTTCCATA+TGG | 0.514828 | 7.4:-33949133 | MS.gene95664:CDS |
| CATGGTGAAGCCTTGGAGAA+AGG | 0.516575 | 7.4:-33948629 | MS.gene95664:CDS |
| GGAAGCACATGGTGAAGCCT+TGG | 0.523810 | 7.4:-33948636 | MS.gene95664:CDS |
| TGGTTTGAAATTGAAGGTAG+AGG | 0.525487 | 7.4:-33948168 | MS.gene95664:CDS |
| GGTTTGGAAATGGTGTTCAA+TGG | 0.527955 | 7.4:-33948328 | MS.gene95664:CDS |
| ATCAAGAACTATGGTATCAA+GGG | 0.539287 | 7.4:-33947981 | MS.gene95664:CDS |
| TATGAGTATGCTAAATCATG+TGG | 0.552563 | 7.4:-33948188 | MS.gene95664:CDS |
| GAATCTAATTCCATTAGAGA+TGG | 0.557271 | 7.4:+33948968 | None:intergenic |
| TGTTCCATATGGCATCATCA+TGG | 0.566239 | 7.4:-33949122 | MS.gene95664:CDS |
| TCTTGATTGGTTACAAACAT+GGG | 0.569487 | 7.4:-33947769 | MS.gene95664:CDS |
| TCAAGTGTGGAAGACTCACT+TGG | 0.579458 | 7.4:+33948660 | None:intergenic |
| CCATATGGCATCATCATGGA+TGG | 0.582147 | 7.4:-33949163 | None:intergenic |
| CAATCAAGAGAAGATATACA+AGG | 0.583066 | 7.4:+33947783 | None:intergenic |
| AGGTCTTCCACATATGGGAA+TGG | 0.588806 | 7.4:-33948057 | MS.gene95664:CDS |
| TGGGAAGAGATGAAAAGTGA+TGG | 0.608114 | 7.4:-33947750 | MS.gene95664:CDS |
| TTCATCACAATCTTCTAACA+TGG | 0.616759 | 7.4:+33948370 | None:intergenic |
| CCATGTGCTTCCATCAAGTG+TGG | 0.618160 | 7.4:+33948647 | None:intergenic |
| AAAATAATGAACGAAACGGG+TGG | 0.646793 | 7.4:-33948113 | MS.gene95664:CDS |
| CCACACTTGATGGAAGCACA+TGG | 0.654957 | 7.4:-33948647 | MS.gene95664:CDS |
| AATCATGGAGAATACCTCAA+AGG | 0.661739 | 7.4:-33948497 | MS.gene95664:CDS |
| AAGAGAGTCACCAATTGGAG+TGG | 0.663623 | 7.4:+33948556 | None:intergenic |
| TGGAGAATACCTCAAAGGCG+AGG | 0.686092 | 7.4:-33948492 | MS.gene95664:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTGACATAATTGATTAT+TGG | - | chr7.4:33948521-33948540 | MS.gene95664:CDS | 15.0% |
| !! | TGAAATTGACATCAATTAAA+TGG | - | chr7.4:33948605-33948624 | MS.gene95664:CDS | 20.0% |
| !!! | AATTTCATGTCATTTTTTGA+AGG | - | chr7.4:33948964-33948983 | MS.gene95664:CDS | 20.0% |
| !!! | ATTTCATGTCATTTTTTGAA+GGG | - | chr7.4:33948965-33948984 | MS.gene95664:CDS | 20.0% |
| !!! | CTTTTAAGGTATTTTATCAA+GGG | - | chr7.4:33948422-33948441 | MS.gene95664:CDS | 20.0% |
| ! | ATCAAAATAATGAACGAAAC+GGG | - | chr7.4:33948754-33948773 | MS.gene95664:intron | 25.0% |
| ! | ATGAAAATTCTGAATGTGTT+TGG | - | chr7.4:33948632-33948651 | MS.gene95664:CDS | 25.0% |
| ! | GATCAAAATAATGAACGAAA+CGG | - | chr7.4:33948753-33948772 | MS.gene95664:intron | 25.0% |
| ! | TCTTGAATATTACCAATTTG+TGG | + | chr7.4:33947947-33947966 | None:intergenic | 25.0% |
| ! | TTTCTTCATCAATTGGAAAT+TGG | + | chr7.4:33947871-33947890 | None:intergenic | 25.0% |
| !! | AAATGCTTATGAGTTTTTGA+AGG | - | chr7.4:33948852-33948871 | MS.gene95664:intron | 25.0% |
| !! | ATCAAGGGAATTATTACTTT+TGG | - | chr7.4:33948904-33948923 | MS.gene95664:intron | 25.0% |
| !! | ATTGCAACAAAGCTTTATAA+TGG | + | chr7.4:33948999-33949018 | None:intergenic | 25.0% |
| !! | GACATAATTGATTATTGGTT+TGG | - | chr7.4:33948526-33948545 | MS.gene95664:CDS | 25.0% |
| !! | TCAATTTCCATATTTTCTTG+TGG | + | chr7.4:33948187-33948206 | None:intergenic | 25.0% |
| !! | TTGGCTTTCAATTTAATGAT+AGG | - | chr7.4:33948793-33948812 | MS.gene95664:intron | 25.0% |
| !!! | ATTGATTATTGGTTTGGAAA+TGG | - | chr7.4:33948532-33948551 | MS.gene95664:CDS | 25.0% |
| !!! | GCTTTTAAGGTATTTTATCA+AGG | - | chr7.4:33948421-33948440 | MS.gene95664:CDS | 25.0% |
| AATACCAAGAAGAAAGTGAA+GGG | - | chr7.4:33947972-33947991 | MS.gene95664:CDS | 30.0% | |
| ATCAAGAACTATGGTATCAA+GGG | - | chr7.4:33948889-33948908 | MS.gene95664:intron | 30.0% | |
| CAATCAAGAGAAGATATACA+AGG | + | chr7.4:33949090-33949109 | None:intergenic | 30.0% | |
| CTTGTATATCTTCTCTTGAT+TGG | - | chr7.4:33949088-33949107 | MS.gene95664:CDS | 30.0% | |
| GAACATAGTCATCATCAATA+TGG | + | chr7.4:33947733-33947752 | None:intergenic | 30.0% | |
| GAATCTAATTCCATTAGAGA+TGG | + | chr7.4:33947905-33947924 | None:intergenic | 30.0% | |
| GATATGATCATTGGTGAATA+TGG | + | chr7.4:33947849-33947868 | None:intergenic | 30.0% | |
| TAAAGGGAAATGATCATAAG+TGG | + | chr7.4:33948083-33948102 | None:intergenic | 30.0% | |
| TACTTTGCCACAAGAAAATA+TGG | - | chr7.4:33948177-33948196 | MS.gene95664:CDS | 30.0% | |
| TATGAGTATGCTAAATCATG+TGG | - | chr7.4:33948682-33948701 | MS.gene95664:CDS | 30.0% | |
| TGGAAATTGGATATGATCAT+TGG | + | chr7.4:33947858-33947877 | None:intergenic | 30.0% | |
| TTCATCACAATCTTCTAACA+TGG | + | chr7.4:33948503-33948522 | None:intergenic | 30.0% | |
| ! | ACATGTGGAAAATTTTGTGA+AGG | + | chr7.4:33948004-33948023 | None:intergenic | 30.0% |
| ! | ATCATGTGGTTTGAAATTGA+AGG | - | chr7.4:33948696-33948715 | MS.gene95664:intron | 30.0% |
| ! | CATGTGGAAAATTTTGTGAA+GGG | + | chr7.4:33948003-33948022 | None:intergenic | 30.0% |
| ! | GGTATTTTATCAAGGGAATT+CGG | - | chr7.4:33948429-33948448 | MS.gene95664:CDS | 30.0% |
| ! | TCTGATTTCATTGAAAGTGT+TGG | + | chr7.4:33948133-33948152 | None:intergenic | 30.0% |
| ! | TCTTGATTGGTTACAAACAT+GGG | - | chr7.4:33949101-33949120 | MS.gene95664:CDS | 30.0% |
| ! | TGAGACACTTGCATTTTATT+TGG | - | chr7.4:33948336-33948355 | MS.gene95664:CDS | 30.0% |
| !! | GGAATTATTACTTTTGGTGA+TGG | - | chr7.4:33948910-33948929 | MS.gene95664:CDS | 30.0% |
| !! | TGAATGTGTTTGGAATTTTG+AGG | - | chr7.4:33948642-33948661 | MS.gene95664:CDS | 30.0% |
| !! | TGGAAAAATGGCTCATTTTT+CGG | - | chr7.4:33948453-33948472 | MS.gene95664:CDS | 30.0% |
| !!! | GTCATTTTTTGAAGGGAATT+TGG | - | chr7.4:33948972-33948991 | MS.gene95664:CDS | 30.0% |
| AAAATAATGAACGAAACGGG+TGG | - | chr7.4:33948757-33948776 | MS.gene95664:intron | 35.0% | |
| AATCATGGAGAATACCTCAA+AGG | - | chr7.4:33948373-33948392 | MS.gene95664:CDS | 35.0% | |
| AATGATAGGTCTTCCACATA+TGG | - | chr7.4:33948807-33948826 | MS.gene95664:intron | 35.0% | |
| ACCAATTTGTGGACTCAAAA+TGG | + | chr7.4:33947936-33947955 | None:intergenic | 35.0% | |
| AGTGATGGCTATCATCATAA+AGG | - | chr7.4:33949135-33949154 | MS.gene95664:CDS | 35.0% | |
| ATACTCATAAAGTTCCCTTC+TGG | + | chr7.4:33948671-33948690 | None:intergenic | 35.0% | |
| ATGATAGGTCTTCCACATAT+GGG | - | chr7.4:33948808-33948827 | MS.gene95664:intron | 35.0% | |
| CAAAAAGTTACCACTCCAAT+TGG | - | chr7.4:33948304-33948323 | MS.gene95664:CDS | 35.0% | |
| GAAATTGAAGGTAGAGGAAA+AGG | - | chr7.4:33948708-33948727 | MS.gene95664:intron | 35.0% | |
| GAATACCAAGAAGAAAGTGA+AGG | - | chr7.4:33947971-33947990 | MS.gene95664:CDS | 35.0% | |
| GAGGATTTGATCAAGAACTA+TGG | - | chr7.4:33948880-33948899 | MS.gene95664:intron | 35.0% | |
| GATCAAGAACTATGGTATCA+AGG | - | chr7.4:33948888-33948907 | MS.gene95664:intron | 35.0% | |
| GATGATGACTATGTTCCATA+TGG | - | chr7.4:33947737-33947756 | MS.gene95664:CDS | 35.0% | |
| TCCAAGGTTTCTTCATCAAT+TGG | + | chr7.4:33947878-33947897 | None:intergenic | 35.0% | |
| TCCAATTGATGAAGAAACCT+TGG | - | chr7.4:33947874-33947893 | MS.gene95664:CDS | 35.0% | |
| ! | CAATTGGAGTGGTAACTTTT+TGG | + | chr7.4:33948306-33948325 | None:intergenic | 35.0% |
| ! | CACAGGGAGAATTTTGTAAA+GGG | + | chr7.4:33948099-33948118 | None:intergenic | 35.0% |
| ! | CTCTTGATTGGTTACAAACA+TGG | - | chr7.4:33949100-33949119 | MS.gene95664:CDS | 35.0% |
| ! | TCACAGGGAGAATTTTGTAA+AGG | + | chr7.4:33948100-33948119 | None:intergenic | 35.0% |
| ! | TGGTTTGAAATTGAAGGTAG+AGG | - | chr7.4:33948702-33948721 | MS.gene95664:intron | 35.0% |
| ! | TTTTATCAAGGGAATTCGGT+TGG | - | chr7.4:33948433-33948452 | MS.gene95664:CDS | 35.0% |
| !! | TCCATTTTGAGTCCACAAAT+TGG | - | chr7.4:33947932-33947951 | MS.gene95664:CDS | 35.0% |
| !!! | GAATTTTCAGGCTGCTTTTA+AGG | - | chr7.4:33948408-33948427 | MS.gene95664:CDS | 35.0% |
| AAAATTCTCCCTGTGATGCA+TGG | - | chr7.4:33948104-33948123 | MS.gene95664:CDS | 40.0% | |
| AACTCCCTTCACTTTCTTCT+TGG | + | chr7.4:33947979-33947998 | None:intergenic | 40.0% | |
| AGGGAATTCGGTTGGAAAAA+TGG | - | chr7.4:33948441-33948460 | MS.gene95664:CDS | 40.0% | |
| CATTAGAGATGGAAGTTCCA+AGG | + | chr7.4:33947894-33947913 | None:intergenic | 40.0% | |
| CTTCTAACCATTCCCATATG+TGG | + | chr7.4:33948823-33948842 | None:intergenic | 40.0% | |
| CTTGGAACTTCCATCTCTAA+TGG | - | chr7.4:33947892-33947911 | MS.gene95664:CDS | 40.0% | |
| GAAATGATCATAAGTGGCAC+TGG | + | chr7.4:33948077-33948096 | None:intergenic | 40.0% | |
| GAAGGTAGAGGAAAAGGAAT+TGG | - | chr7.4:33948714-33948733 | MS.gene95664:intron | 40.0% | |
| GATTTGAACTATACCCTTCG+AGG | + | chr7.4:33948027-33948046 | None:intergenic | 40.0% | |
| GCTCAAGAAGTGACAAATCA+TGG | - | chr7.4:33948358-33948377 | MS.gene95664:CDS | 40.0% | |
| GGTTTGGAAATGGTGTTCAA+TGG | - | chr7.4:33948542-33948561 | MS.gene95664:CDS | 40.0% | |
| TGGGAAGAGATGAAAAGTGA+TGG | - | chr7.4:33949120-33949139 | MS.gene95664:CDS | 40.0% | |
| TGTTCCATATGGCATCATCA+TGG | - | chr7.4:33947748-33947767 | MS.gene95664:CDS | 40.0% | |
| ! | AATTTTCCACATGTCCTCGA+AGG | - | chr7.4:33948010-33948029 | MS.gene95664:CDS | 40.0% |
| ! | ATTTTACAACTGTCTCCGAG+GGG | + | chr7.4:33948049-33948068 | None:intergenic | 40.0% |
| ! | ATTTTCCACATGTCCTCGAA+GGG | - | chr7.4:33948011-33948030 | MS.gene95664:CDS | 40.0% |
| ! | CATTTTACAACTGTCTCCGA+GGG | + | chr7.4:33948050-33948069 | None:intergenic | 40.0% |
| ! | CGAGGCATACAAGAATTTTC+AGG | - | chr7.4:33948396-33948415 | MS.gene95664:CDS | 40.0% |
| ! | GGGTGGAAAGAAAGAGTTTT+TGG | - | chr7.4:33948774-33948793 | MS.gene95664:intron | 40.0% |
| ! | TCATCCATGATGATGCCATA+TGG | + | chr7.4:33947755-33947774 | None:intergenic | 40.0% |
| ! | TGTTCAATGGCCTTTTCTCT+TGG | - | chr7.4:33948555-33948574 | MS.gene95664:CDS | 40.0% |
| !! | GAATTTTGAGGATGCCAGAA+GGG | - | chr7.4:33948654-33948673 | MS.gene95664:CDS | 40.0% |
| !! | TGAGTTTTTGAAGGTAGCTG+AGG | - | chr7.4:33948861-33948880 | MS.gene95664:intron | 40.0% |
| !! | TGCATGTGAAGTGTTGTTTG+TGG | - | chr7.4:33949062-33949081 | MS.gene95664:CDS | 40.0% |
| !! | TGCTTTTTGTCCTTTCTCCA+AGG | + | chr7.4:33948254-33948273 | None:intergenic | 40.0% |
| AAGAGAGTCACCAATTGGAG+TGG | + | chr7.4:33948317-33948336 | None:intergenic | 45.0% | |
| AGGTCTTCCACATATGGGAA+TGG | - | chr7.4:33948813-33948832 | MS.gene95664:intron | 45.0% | |
| AGTGAGTCTTCCACACTTGA+TGG | - | chr7.4:33948213-33948232 | MS.gene95664:CDS | 45.0% | |
| CCTCGGAGACAGTTGTAAAA+TGG | - | chr7.4:33948048-33948067 | MS.gene95664:CDS | 45.0% | |
| GAAACAGCCTCCAAGAGAAA+AGG | + | chr7.4:33948568-33948587 | None:intergenic | 45.0% | |
| GGGTATAGTTCAAATCCCCT+CGG | - | chr7.4:33948031-33948050 | MS.gene95664:CDS | 45.0% | |
| GTCTCAAGAGAGTCACCAAT+TGG | + | chr7.4:33948322-33948341 | None:intergenic | 45.0% | |
| TCAAGTGTGGAAGACTCACT+TGG | + | chr7.4:33948213-33948232 | None:intergenic | 45.0% | |
| ! | ATGATCATAAGTGGCACTGG+CGG | + | chr7.4:33948074-33948093 | None:intergenic | 45.0% |
| ! | CCATTTTACAACTGTCTCCG+AGG | + | chr7.4:33948051-33948070 | None:intergenic | 45.0% |
| ! | TCAATGGCCTTTTCTCTTGG+AGG | - | chr7.4:33948558-33948577 | MS.gene95664:CDS | 45.0% |
| !! | GGAATTTTGAGGATGCCAGA+AGG | - | chr7.4:33948653-33948672 | MS.gene95664:CDS | 45.0% |
| CATGGTGAAGCCTTGGAGAA+AGG | - | chr7.4:33948241-33948260 | MS.gene95664:CDS | 50.0% | |
| CCATGTGCTTCCATCAAGTG+TGG | + | chr7.4:33948226-33948245 | None:intergenic | 50.0% | |
| CTATACCCTTCGAGGACATG+TGG | + | chr7.4:33948019-33948038 | None:intergenic | 50.0% | |
| GTTGGACTCCATGCATCACA+GGG | + | chr7.4:33948115-33948134 | None:intergenic | 50.0% | |
| TCTTGTATGCCTCGCCTTTG+AGG | + | chr7.4:33948390-33948409 | None:intergenic | 50.0% | |
| TGGAGAATACCTCAAAGGCG+AGG | - | chr7.4:33948378-33948397 | MS.gene95664:CDS | 50.0% | |
| TGTTGGACTCCATGCATCAC+AGG | + | chr7.4:33948116-33948135 | None:intergenic | 50.0% | |
| ! | CCACACTTGATGGAAGCACA+TGG | - | chr7.4:33948223-33948242 | MS.gene95664:CDS | 50.0% |
| ! | GGAAGCACATGGTGAAGCCT+TGG | - | chr7.4:33948234-33948253 | MS.gene95664:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 33947722 | 33949170 | 33947722 | ID=MS.gene95664 |
| chr7.4 | mRNA | 33947722 | 33949170 | 33947722 | ID=MS.gene95664.t1;Parent=MS.gene95664 |
| chr7.4 | exon | 33948906 | 33949170 | 33948906 | ID=MS.gene95664.t1.exon1;Parent=MS.gene95664.t1 |
| chr7.4 | CDS | 33948906 | 33949170 | 33948906 | ID=cds.MS.gene95664.t1;Parent=MS.gene95664.t1 |
| chr7.4 | exon | 33947722 | 33948701 | 33947722 | ID=MS.gene95664.t1.exon2;Parent=MS.gene95664.t1 |
| chr7.4 | CDS | 33947722 | 33948701 | 33947722 | ID=cds.MS.gene95664.t1;Parent=MS.gene95664.t1 |
| Gene Sequence |
| Protein sequence |
