Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95670.t1 | XP_024626741.1 | 91.5 | 272 | 22 | 1 | 1 | 272 | 1 | 271 | 5.60E-135 | 490.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95670.t1 | Q39262 | 41.8 | 98 | 48 | 4 | 82 | 179 | 57 | 145 | 2.0e-08 | 61.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95670.t1 | A0A396H587 | 57.1 | 280 | 89 | 7 | 20 | 272 | 1 | 276 | 5.6e-68 | 267.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene95670.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95670.t1 | MTR_1g013130 | 39.200 | 125 | 61 | 5 | 63 | 179 | 76 | 193 | 1.72e-12 | 66.2 |
| MS.gene95670.t1 | MTR_3g011990 | 43.678 | 87 | 32 | 3 | 67 | 146 | 72 | 148 | 1.95e-11 | 63.5 |
| MS.gene95670.t1 | MTR_3g012010 | 49.254 | 67 | 27 | 1 | 66 | 125 | 71 | 137 | 2.19e-11 | 63.5 |
| MS.gene95670.t1 | MTR_8g466760 | 46.667 | 75 | 27 | 3 | 77 | 148 | 86 | 150 | 4.00e-11 | 62.8 |
| MS.gene95670.t1 | MTR_7g026977 | 36.111 | 108 | 60 | 2 | 26 | 126 | 83 | 188 | 6.19e-11 | 62.4 |
| MS.gene95670.t1 | MTR_3g065020 | 71.795 | 39 | 9 | 1 | 80 | 118 | 82 | 118 | 9.51e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95670.t1 | AT5G10970 | 39.837 | 123 | 48 | 6 | 63 | 179 | 84 | 186 | 1.31e-11 | 63.9 |
| MS.gene95670.t1 | AT5G25160 | 41.837 | 98 | 48 | 4 | 82 | 179 | 57 | 145 | 1.72e-11 | 63.2 |
| MS.gene95670.t1 | AT1G80730 | 68.293 | 41 | 11 | 1 | 78 | 118 | 60 | 98 | 5.12e-11 | 61.6 |
Find 81 sgRNAs with CRISPR-Local
Find 89 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACCAATGCCTTTCCTTCT+TGG | 0.138422 | 7.4:+33826453 | MS.gene95670:CDS |
| TTTGATTTCGACTCTAATTT+TGG | 0.159297 | 7.4:-33826041 | None:intergenic |
| TGAATTATGCCTTCTCTATT+AGG | 0.184623 | 7.4:-33826728 | None:intergenic |
| CCCCAAGCAACAACACAATT+TGG | 0.187401 | 7.4:+33826563 | MS.gene95670:CDS |
| TCTTGGCTCGGTTCACCTTA+TGG | 0.231125 | 7.4:+33826470 | MS.gene95670:CDS |
| TGGTGTGAGTGCCAAGTCTT+AGG | 0.231168 | 7.4:-33826121 | None:intergenic |
| CGGGTTGCAAAGGGTGTATT+TGG | 0.256836 | 7.4:-33826515 | None:intergenic |
| CCCAAATTGTGTTGTTGCTT+GGG | 0.273537 | 7.4:-33826564 | None:intergenic |
| GTTGTTGCTTGGGGTGAATT+TGG | 0.275394 | 7.4:-33826554 | None:intergenic |
| CCCAAAGTGTTTGACCTTTG+TGG | 0.286115 | 7.4:-33826632 | None:intergenic |
| GTTCACGCTTATGAGCATTT+TGG | 0.317761 | 7.4:-33826292 | None:intergenic |
| AGGTCAAACACTTTGGGTTT+GGG | 0.338136 | 7.4:+33826638 | MS.gene95670:CDS |
| CCACAAAGGTCAAACACTTT+GGG | 0.340923 | 7.4:+33826632 | MS.gene95670:CDS |
| GTGTTTGACCTTTGTGGAAT+TGG | 0.343209 | 7.4:-33826626 | None:intergenic |
| AAGGTCAAACACTTTGGGTT+TGG | 0.344659 | 7.4:+33826637 | MS.gene95670:CDS |
| CAAGGGTTTGGAAGTGGACT+TGG | 0.360530 | 7.4:-33826141 | None:intergenic |
| GTCACATATTGGACGCCAAT+TGG | 0.375665 | 7.4:-33826434 | None:intergenic |
| TCCCAAATTGTGTTGTTGCT+TGG | 0.377648 | 7.4:-33826565 | None:intergenic |
| TTCTCCACTTCTCAAGCTCT+TGG | 0.384550 | 7.4:+33826263 | MS.gene95670:CDS |
| TAGAAACCTCAAACGCAAAA+TGG | 0.385914 | 7.4:+33826010 | MS.gene95670:CDS |
| TCCACCGTTCTCCAAGGGTT+TGG | 0.389944 | 7.4:-33826153 | None:intergenic |
| CACCTTATGGTGGCTATGGA+GGG | 0.398816 | 7.4:+33826483 | MS.gene95670:CDS |
| GAAAGGCATTGGTCACATAT+TGG | 0.406502 | 7.4:-33826445 | None:intergenic |
| TAATAGAGAAGGCATAATTC+AGG | 0.407241 | 7.4:+33826730 | MS.gene95670:CDS |
| CCCAAGCAACAACACAATTT+GGG | 0.410223 | 7.4:+33826564 | MS.gene95670:CDS |
| TCCACAAAGGTCAAACACTT+TGG | 0.411221 | 7.4:+33826631 | MS.gene95670:CDS |
| TTAGGATCACGAGATAATAA+TGG | 0.420098 | 7.4:-33826710 | None:intergenic |
| ACCACTTTCTGCTCAGGTAA+AGG | 0.442903 | 7.4:-33826209 | None:intergenic |
| TCAAGCTCTATTCACTATCA+AGG | 0.445678 | 7.4:+33826377 | MS.gene95670:CDS |
| AATGCCTTTCCTTCTTGGCT+CGG | 0.453136 | 7.4:+33826458 | MS.gene95670:CDS |
| TGATCAATGAAATTTCTTTG+AGG | 0.466939 | 7.4:-33826668 | None:intergenic |
| TTGGCATTTGCATCACATAC+CGG | 0.471216 | 7.4:-33826535 | None:intergenic |
| GTTCTCCAAGGGTTTGGAAG+TGG | 0.473154 | 7.4:-33826147 | None:intergenic |
| TCACATATTGGACGCCAATT+GGG | 0.475144 | 7.4:-33826433 | None:intergenic |
| TCACCTTATGGTGGCTATGG+AGG | 0.475493 | 7.4:+33826482 | MS.gene95670:CDS |
| TCCACTTCTCAAGCTCTTGG+AGG | 0.477317 | 7.4:+33826266 | MS.gene95670:CDS |
| GCTAACTTGCACAACCCAAT+TGG | 0.486494 | 7.4:+33826419 | MS.gene95670:CDS |
| GGTGTGAGTGCCAAGTCTTA+GGG | 0.491546 | 7.4:-33826120 | None:intergenic |
| TAAAAGGAGAGAGGAAGAGA+TGG | 0.501837 | 7.4:+33826337 | MS.gene95670:CDS |
| GGTTCACCTTATGGTGGCTA+TGG | 0.502207 | 7.4:+33826479 | MS.gene95670:CDS |
| AACTCTACCACTTTCTGCTC+AGG | 0.502340 | 7.4:-33826215 | None:intergenic |
| CCAAATTGTGTTGTTGCTTG+GGG | 0.502858 | 7.4:-33826563 | None:intergenic |
| CAAGTCCACTTCCAAACCCT+TGG | 0.519689 | 7.4:+33826142 | MS.gene95670:CDS |
| ATCACATACCGGGTTGCAAA+GGG | 0.522044 | 7.4:-33826524 | None:intergenic |
| ACCCCTCCATAGCCACCATA+AGG | 0.522093 | 7.4:-33826485 | None:intergenic |
| GTTGATGATGAGGACACATT+GGG | 0.531489 | 7.4:-33826758 | None:intergenic |
| TGGCATTTGCATCACATACC+GGG | 0.531856 | 7.4:-33826534 | None:intergenic |
| TCTATCCTCATCATTTCCAA+TGG | 0.532227 | 7.4:-33825991 | None:intergenic |
| ATTTCCAATGGAAATTCTCT+CGG | 0.535410 | 7.4:-33825979 | None:intergenic |
| ACCTTATGGTGGCTATGGAG+GGG | 0.537456 | 7.4:+33826484 | MS.gene95670:CDS |
| ATTAGAGTCGAAATCAAAGA+AGG | 0.542585 | 7.4:+33826046 | MS.gene95670:CDS |
| CAAATACACCCTTTGCAACC+CGG | 0.543155 | 7.4:+33826516 | MS.gene95670:CDS |
| GAATAGAGCTTGAAAACCAT+AGG | 0.547197 | 7.4:-33826367 | None:intergenic |
| TCAACATCAGATTCAGAGGT+TGG | 0.549087 | 7.4:-33826086 | None:intergenic |
| TAGCACTACGGAAATATGAA+TGG | 0.550571 | 7.4:-33826400 | None:intergenic |
| AACCTCTGAATCTGATGTTG+AGG | 0.555993 | 7.4:+33826088 | MS.gene95670:CDS |
| ACCTCCAAGAGCTTGAGAAG+TGG | 0.556669 | 7.4:-33826267 | None:intergenic |
| AATGGAAGATAAAAGGAGAG+AGG | 0.557828 | 7.4:+33826328 | MS.gene95670:CDS |
| TGAATGTCCACCGTTCTCCA+AGG | 0.561681 | 7.4:-33826159 | None:intergenic |
| CATCACATACCGGGTTGCAA+AGG | 0.564146 | 7.4:-33826525 | None:intergenic |
| AAGAGATGGATTCAACCCTA+TGG | 0.564603 | 7.4:+33826351 | MS.gene95670:CDS |
| GAATGTCCACCGTTCTCCAA+GGG | 0.565536 | 7.4:-33826158 | None:intergenic |
| ACCTTTACCTGAGCAGAAAG+TGG | 0.574184 | 7.4:+33826208 | MS.gene95670:CDS |
| TAAGGTGAACCGAGCCAAGA+AGG | 0.575815 | 7.4:-33826467 | None:intergenic |
| TGAACCGAGCCAAGAAGGAA+AGG | 0.582959 | 7.4:-33826462 | None:intergenic |
| GAGCCAAGAAGGAAAGGCAT+TGG | 0.584408 | 7.4:-33826456 | None:intergenic |
| ATGTCCGAGAGAATTTCCAT+TGG | 0.586763 | 7.4:+33825975 | MS.gene95670:CDS |
| AATAGAGCTTGAAAACCATA+GGG | 0.593787 | 7.4:-33826366 | None:intergenic |
| ATCCTCAACATCAGATTCAG+AGG | 0.595365 | 7.4:-33826090 | None:intergenic |
| AGTTGATGATGAGGACACAT+TGG | 0.595890 | 7.4:-33826759 | None:intergenic |
| TCTCGTGATCCTAATAGAGA+AGG | 0.597683 | 7.4:+33826719 | MS.gene95670:CDS |
| AATTTCCATTGGAAATGATG+AGG | 0.604935 | 7.4:+33825986 | MS.gene95670:CDS |
| CCTCAAACGCAAAATGGTGG+AGG | 0.605406 | 7.4:+33826016 | MS.gene95670:CDS |
| GATTTACTAACCCTAAGACT+TGG | 0.606458 | 7.4:+33826110 | MS.gene95670:CDS |
| ACTTCCAAACCCTTGGAGAA+CGG | 0.610472 | 7.4:+33826149 | MS.gene95670:CDS |
| TGGCTCGGTTCACCTTATGG+TGG | 0.610898 | 7.4:+33826473 | MS.gene95670:CDS |
| AAACCTCAAACGCAAAATGG+TGG | 0.616518 | 7.4:+33826013 | MS.gene95670:CDS |
| GGTTGTGCAAGTTAGCACTA+CGG | 0.648362 | 7.4:-33826412 | None:intergenic |
| TCCAAACCCTTGGAGAACGG+TGG | 0.656704 | 7.4:+33826152 | MS.gene95670:CDS |
| CTGCATTTCCAATTCCACAA+AGG | 0.667747 | 7.4:+33826618 | MS.gene95670:CDS |
| CGTTGATTGAGTTGATGATG+AGG | 0.670107 | 7.4:-33826768 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAATGGAAGATAAA+AGG | + | chr7.4:33826321-33826340 | MS.gene95670:CDS | 15.0% |
| ! | TGAACGTGTCTTAAAAAAAA+TGG | + | chr7.4:33826310-33826329 | MS.gene95670:CDS | 25.0% |
| ! | TGATCAATGAAATTTCTTTG+AGG | - | chr7.4:33826671-33826690 | None:intergenic | 25.0% |
| !!! | AATTTGGGATGACTAATTTT+TGG | + | chr7.4:33826579-33826598 | MS.gene95670:CDS | 25.0% |
| !!! | ATTTGGGATGACTAATTTTT+GGG | + | chr7.4:33826580-33826599 | MS.gene95670:CDS | 25.0% |
| !!! | TTTGATTTCGACTCTAATTT+TGG | - | chr7.4:33826044-33826063 | None:intergenic | 25.0% |
| AATAGAGCTTGAAAACCATA+GGG | - | chr7.4:33826369-33826388 | None:intergenic | 30.0% | |
| AATTTCCATTGGAAATGATG+AGG | + | chr7.4:33825986-33826005 | MS.gene95670:CDS | 30.0% | |
| ATTAGAGTCGAAATCAAAGA+AGG | + | chr7.4:33826046-33826065 | MS.gene95670:CDS | 30.0% | |
| ATTTCCAATGGAAATTCTCT+CGG | - | chr7.4:33825982-33826001 | None:intergenic | 30.0% | |
| TGAATTATGCCTTCTCTATT+AGG | - | chr7.4:33826731-33826750 | None:intergenic | 30.0% | |
| TTAGGATCACGAGATAATAA+TGG | - | chr7.4:33826713-33826732 | None:intergenic | 30.0% | |
| ! | TAATAGAGAAGGCATAATTC+AGG | + | chr7.4:33826730-33826749 | MS.gene95670:CDS | 30.0% |
| !! | TTTGGGATGACTAATTTTTG+GGG | + | chr7.4:33826581-33826600 | MS.gene95670:CDS | 30.0% |
| AATGGAAGATAAAAGGAGAG+AGG | + | chr7.4:33826328-33826347 | MS.gene95670:CDS | 35.0% | |
| GAATAGAGCTTGAAAACCAT+AGG | - | chr7.4:33826370-33826389 | None:intergenic | 35.0% | |
| GATTTACTAACCCTAAGACT+TGG | + | chr7.4:33826110-33826129 | MS.gene95670:CDS | 35.0% | |
| TAGAAACCTCAAACGCAAAA+TGG | + | chr7.4:33826010-33826029 | MS.gene95670:CDS | 35.0% | |
| TAGCACTACGGAAATATGAA+TGG | - | chr7.4:33826403-33826422 | None:intergenic | 35.0% | |
| TCAAGCTCTATTCACTATCA+AGG | + | chr7.4:33826377-33826396 | MS.gene95670:CDS | 35.0% | |
| TCTATCCTCATCATTTCCAA+TGG | - | chr7.4:33825994-33826013 | None:intergenic | 35.0% | |
| AAACCTCAAACGCAAAATGG+TGG | + | chr7.4:33826013-33826032 | MS.gene95670:CDS | 40.0% | |
| AACCTCTGAATCTGATGTTG+AGG | + | chr7.4:33826088-33826107 | MS.gene95670:CDS | 40.0% | |
| ATCCTCAACATCAGATTCAG+AGG | - | chr7.4:33826093-33826112 | None:intergenic | 40.0% | |
| ATGTCCGAGAGAATTTCCAT+TGG | + | chr7.4:33825975-33825994 | MS.gene95670:CDS | 40.0% | |
| CCACAAAGGTCAAACACTTT+GGG | + | chr7.4:33826632-33826651 | MS.gene95670:CDS | 40.0% | |
| CCCAAGCAACAACACAATTT+GGG | + | chr7.4:33826564-33826583 | MS.gene95670:CDS | 40.0% | |
| CTGCATTTCCAATTCCACAA+AGG | + | chr7.4:33826618-33826637 | MS.gene95670:CDS | 40.0% | |
| GTGTTTGACCTTTGTGGAAT+TGG | - | chr7.4:33826629-33826648 | None:intergenic | 40.0% | |
| TAAAAGGAGAGAGGAAGAGA+TGG | + | chr7.4:33826337-33826356 | MS.gene95670:CDS | 40.0% | |
| TCAACATCAGATTCAGAGGT+TGG | - | chr7.4:33826089-33826108 | None:intergenic | 40.0% | |
| TCACATATTGGACGCCAATT+GGG | - | chr7.4:33826436-33826455 | None:intergenic | 40.0% | |
| TCCACAAAGGTCAAACACTT+TGG | + | chr7.4:33826631-33826650 | MS.gene95670:CDS | 40.0% | |
| TCTCGTGATCCTAATAGAGA+AGG | + | chr7.4:33826719-33826738 | MS.gene95670:CDS | 40.0% | |
| TTGGCATTTGCATCACATAC+CGG | - | chr7.4:33826538-33826557 | None:intergenic | 40.0% | |
| ! | AAGAGATGGATTCAACCCTA+TGG | + | chr7.4:33826351-33826370 | MS.gene95670:CDS | 40.0% |
| ! | AAGGTCAAACACTTTGGGTT+TGG | + | chr7.4:33826637-33826656 | MS.gene95670:CDS | 40.0% |
| ! | AGGTCAAACACTTTGGGTTT+GGG | + | chr7.4:33826638-33826657 | MS.gene95670:CDS | 40.0% |
| ! | CCAAATTGTGTTGTTGCTTG+GGG | - | chr7.4:33826566-33826585 | None:intergenic | 40.0% |
| ! | CCCAAATTGTGTTGTTGCTT+GGG | - | chr7.4:33826567-33826586 | None:intergenic | 40.0% |
| ! | GTTCACGCTTATGAGCATTT+TGG | - | chr7.4:33826295-33826314 | None:intergenic | 40.0% |
| ! | TCCCAAATTGTGTTGTTGCT+TGG | - | chr7.4:33826568-33826587 | None:intergenic | 40.0% |
| !! | AGTTGATGATGAGGACACAT+TGG | - | chr7.4:33826762-33826781 | None:intergenic | 40.0% |
| !! | CGTTGATTGAGTTGATGATG+AGG | - | chr7.4:33826771-33826790 | None:intergenic | 40.0% |
| !! | GAAAGGCATTGGTCACATAT+TGG | - | chr7.4:33826448-33826467 | None:intergenic | 40.0% |
| !! | GTTGATGATGAGGACACATT+GGG | - | chr7.4:33826761-33826780 | None:intergenic | 40.0% |
| !!! | ATGACTAATTTTTGGGGTGG+AGG | + | chr7.4:33826587-33826606 | MS.gene95670:CDS | 40.0% |
| AACTCTACCACTTTCTGCTC+AGG | - | chr7.4:33826218-33826237 | None:intergenic | 45.0% | |
| AATGCCTTTCCTTCTTGGCT+CGG | + | chr7.4:33826458-33826477 | MS.gene95670:CDS | 45.0% | |
| ACCACTTTCTGCTCAGGTAA+AGG | - | chr7.4:33826212-33826231 | None:intergenic | 45.0% | |
| ACCTTTACCTGAGCAGAAAG+TGG | + | chr7.4:33826208-33826227 | MS.gene95670:CDS | 45.0% | |
| ACTTCCAAACCCTTGGAGAA+CGG | + | chr7.4:33826149-33826168 | MS.gene95670:CDS | 45.0% | |
| ATCACATACCGGGTTGCAAA+GGG | - | chr7.4:33826527-33826546 | None:intergenic | 45.0% | |
| CAAATACACCCTTTGCAACC+CGG | + | chr7.4:33826516-33826535 | MS.gene95670:CDS | 45.0% | |
| CCCCAAGCAACAACACAATT+TGG | + | chr7.4:33826563-33826582 | MS.gene95670:CDS | 45.0% | |
| GGTTGTGCAAGTTAGCACTA+CGG | - | chr7.4:33826415-33826434 | None:intergenic | 45.0% | |
| GTCACATATTGGACGCCAAT+TGG | - | chr7.4:33826437-33826456 | None:intergenic | 45.0% | |
| TGACCAATGCCTTTCCTTCT+TGG | + | chr7.4:33826453-33826472 | MS.gene95670:CDS | 45.0% | |
| TGGCATTTGCATCACATACC+GGG | - | chr7.4:33826537-33826556 | None:intergenic | 45.0% | |
| TTCTCCACTTCTCAAGCTCT+TGG | + | chr7.4:33826263-33826282 | MS.gene95670:CDS | 45.0% | |
| ! | CCCAAAGTGTTTGACCTTTG+TGG | - | chr7.4:33826635-33826654 | None:intergenic | 45.0% |
| ! | GCTAACTTGCACAACCCAAT+TGG | + | chr7.4:33826419-33826438 | MS.gene95670:CDS | 45.0% |
| ! | GTTGTTGCTTGGGGTGAATT+TGG | - | chr7.4:33826557-33826576 | None:intergenic | 45.0% |
| !! | GGGATGACTAATTTTTGGGG+TGG | + | chr7.4:33826584-33826603 | MS.gene95670:CDS | 45.0% |
| ACCTCCAAGAGCTTGAGAAG+TGG | - | chr7.4:33826270-33826289 | None:intergenic | 50.0% | |
| ACCTTATGGTGGCTATGGAG+GGG | + | chr7.4:33826484-33826503 | MS.gene95670:CDS | 50.0% | |
| CAAGTCCACTTCCAAACCCT+TGG | + | chr7.4:33826142-33826161 | MS.gene95670:CDS | 50.0% | |
| CACCTTATGGTGGCTATGGA+GGG | + | chr7.4:33826483-33826502 | MS.gene95670:CDS | 50.0% | |
| CATCACATACCGGGTTGCAA+AGG | - | chr7.4:33826528-33826547 | None:intergenic | 50.0% | |
| CCTCAAACGCAAAATGGTGG+AGG | + | chr7.4:33826016-33826035 | MS.gene95670:CDS | 50.0% | |
| GAATGTCCACCGTTCTCCAA+GGG | - | chr7.4:33826161-33826180 | None:intergenic | 50.0% | |
| GGTGTGAGTGCCAAGTCTTA+GGG | - | chr7.4:33826123-33826142 | None:intergenic | 50.0% | |
| GGTTCACCTTATGGTGGCTA+TGG | + | chr7.4:33826479-33826498 | MS.gene95670:CDS | 50.0% | |
| GTTCTCCAAGGGTTTGGAAG+TGG | - | chr7.4:33826150-33826169 | None:intergenic | 50.0% | |
| TAAGGTGAACCGAGCCAAGA+AGG | - | chr7.4:33826470-33826489 | None:intergenic | 50.0% | |
| TCACCTTATGGTGGCTATGG+AGG | + | chr7.4:33826482-33826501 | MS.gene95670:CDS | 50.0% | |
| TCCACTTCTCAAGCTCTTGG+AGG | + | chr7.4:33826266-33826285 | MS.gene95670:CDS | 50.0% | |
| TGAACCGAGCCAAGAAGGAA+AGG | - | chr7.4:33826465-33826484 | None:intergenic | 50.0% | |
| TGAATGTCCACCGTTCTCCA+AGG | - | chr7.4:33826162-33826181 | None:intergenic | 50.0% | |
| TGGTGTGAGTGCCAAGTCTT+AGG | - | chr7.4:33826124-33826143 | None:intergenic | 50.0% | |
| ! | CAAGGGTTTGGAAGTGGACT+TGG | - | chr7.4:33826144-33826163 | None:intergenic | 50.0% |
| ! | CCTCCACCATTTTGCGTTTG+AGG | - | chr7.4:33826019-33826038 | None:intergenic | 50.0% |
| ! | CGGGTTGCAAAGGGTGTATT+TGG | - | chr7.4:33826518-33826537 | None:intergenic | 50.0% |
| ! | GAGCCAAGAAGGAAAGGCAT+TGG | - | chr7.4:33826459-33826478 | None:intergenic | 50.0% |
| !! | TCTTGGCTCGGTTCACCTTA+TGG | + | chr7.4:33826470-33826489 | MS.gene95670:CDS | 50.0% |
| ACCCCTCCATAGCCACCATA+AGG | - | chr7.4:33826488-33826507 | None:intergenic | 55.0% | |
| TCCAAACCCTTGGAGAACGG+TGG | + | chr7.4:33826152-33826171 | MS.gene95670:CDS | 55.0% | |
| TCCACCGTTCTCCAAGGGTT+TGG | - | chr7.4:33826156-33826175 | None:intergenic | 55.0% | |
| !! | TGGCTCGGTTCACCTTATGG+TGG | + | chr7.4:33826473-33826492 | MS.gene95670:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 33825975 | 33826793 | 33825975 | ID=MS.gene95670 |
| chr7.4 | mRNA | 33825975 | 33826793 | 33825975 | ID=MS.gene95670.t1;Parent=MS.gene95670 |
| chr7.4 | exon | 33825975 | 33826793 | 33825975 | ID=MS.gene95670.t1.exon1;Parent=MS.gene95670.t1 |
| chr7.4 | CDS | 33825975 | 33826793 | 33825975 | ID=cds.MS.gene95670.t1;Parent=MS.gene95670.t1 |
| Gene Sequence |
| Protein sequence |
